tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.121655 (88 seq.)
>W1710785724 LJIC01000091 Alphaproteobacteria Rhodopseudomonas sp. AAP120 [LJIC] 8063 7979 - Leu TAG [ENA] ¡û
>W1710864223 LMFS01000001 Alphaproteobacteria Pseudolabrys sp. Root1462 [LMFS] 1777662 1777746 + Leu TAG [ENA] ¡û
>W1711169184 LVYV01000003 Alphaproteobacteria Tardiphaga robiniae [LVYV] 193788 193704 - Leu TAG [ENA] ¡û
>W131222241 AUBC01000008 Alphaproteobacteria Salinarimonas rosea DSM 21201 [AUBC] 21585 21501 - Leu TAG [ENA] ¡û
>W1711502234 MKSM01000018 Alphaproteobacteria Nitrobacter sp. 62-23 [MKSM] 5340 5256 - Leu TAG [ENA] ¡û
>W1711505922 MKVY01000038 Alphaproteobacteria Rhizobiales bacterium 65-9 [MKVY] 463477 463561 + Leu TAG [ENA] ¡û
>W1711505987 MKWA01000002 Alphaproteobacteria Rhizobiales bacterium 64-17 [MKWA] 412698 412614 - Leu TAG [ENA] ¡û
>W1711783530 MVOD01000020 Alphaproteobacteria Rhodopseudomonas palustris [MVOD] 21243 21327 + Leu TAG [ENA] ¡û
>W1711795371 MWPQ01000039 Alphaproteobacteria Nitrobacter vulgaris [MWPQ] 81407 81323 - Leu TAG [ENA] ¡û
>W131166447 ARCM01000001 Alphaproteobacteria Ancylobacter sp. FA202 [ARCM] 59194 59110 - Leu TAG [ENA] ¡û
>W131175667 ARJL01000003 Alphaproteobacteria Xanthobacteraceae bacterium 501b [ARJL] 742295 742379 + Leu TAG [ENA] ¡û
>W131226875 AUES01000004 Alphaproteobacteria Bradyrhizobium sp. URHA0002 [AUES] 151021 151105 + Leu TAG [ENA] ¡û
>C014946 CP000319 Alphaproteobacteria Nitrobacter hamburgensis X14 [CP000319] 2482912 2482828 - Leu TAG [Ensembl] ¡û
>C015379 CP000115 Alphaproteobacteria Nitrobacter winogradskyi Nb-255 [CP000115] 2085621 2085537 - Leu TAG [Ensembl] ¡û
>C018890 CP000301 Alphaproteobacteria Rhodopseudomonas palustris [CP000301] 2593815 2593899 + Leu TAG [Ensembl] ¡û
>C019008 BX571963 Alphaproteobacteria Rhodopseudomonas palustris [BX571963] 3356522 3356438 - Leu TAG [Ensembl] ¡û
>C019039 CP000250 Alphaproteobacteria Rhodopseudomonas palustris HaA2 [CP000250] 2939436 2939520 + Leu TAG [Ensembl] ¡û
>w013002 AAMY01000019 Alphaproteobacteria Nitrobacter sp. Nb-311A [AAMY] 57859 57943 + Leu TAG [ENA] ¡û
>WENV180363852 OBNZ01012955 [OBNZ] marine metagenome; ENVO:00002010 521 437 - Leu TAG [ENA] ¢þ
>WENV180367184 OBOE01019702 [OBOE] marine metagenome; ENVO:00002010 285 369 + Leu TAG [ENA] ¢þ
>WENV180390556 OBPL01000835 [OBPL] marine metagenome; Sterivex filter 1626 1542 - Leu TAG [ENA] ¢þ
>WENV180391436 OBPN01001294 [OBPN] marine metagenome; seawater 711 795 + Leu TAG [ENA] ¢þ
>WENV180396819 OBPW01007490 [OBPW] marine metagenome; seawater 357 273 - Leu TAG [ENA] ¢þ
>WENV180636787 OCRF01062320 [OCRF] marine metagenome; niskin bottle 258 174 - Leu TAG [ENA] ¢þ
>WENV180690974 OCZS010042933 [OCZS] soil metagenome; soil 183 267 + Leu TAG [ENA] ¢þ
>WENV181234776 OFEU01007660 [OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium 361 445 + Leu TAG [ENA] ¢þ
>WENV181307929 OFIS01000041 [OFIS] sludge metagenome; sludge 158709 158625 - Leu TAG [ENA] ¢þ
>WENV181311947 OFJB01025010 [OFJB] sludge metagenome; sludge 814 898 + Leu TAG [ENA] ¢þ
>WENV181401908 OFTX01019191 [OFTX] sludge metagenome; sludge 273 357 + Leu TAG [ENA] ¢þ
>WENV181401916 OFTX01020805 [OFTX] sludge metagenome; sludge 599 515 - Leu TAG [ENA] ¢þ
>WENV181402585 OFTY01006074 [OFTY] sludge metagenome; sludge 1255 1339 + Leu TAG [ENA] ¢þ
>W08007835 ABKN01000001 Alphaproteobacteria Afipia carboxidovorans OM5 [ABKN] 1822654 1822738 + Leu TAG [ENA] ¡û
>W141223320 BADD01000501 Alphaproteobacteria Rhodopseudomonas sp. B29 [BADD] 6945 6861 - Leu TAG [ENA] ¡û
>WENV183619794 OOFQ01049653 [OOFQ] marine metagenome; seawater 190 274 + Leu TAG [ENA] ¢þ
>WENV183636440 OOKD01001298 [OOKD] human gut metagenome; Skin biopsy 2414 2498 + Leu TAG [ENA] ¢þ
>WENV183680413 ORMF010178620 [ORMF] groundwater metagenome; groundwater 163 247 + Leu TAG [ENA] ¢þ
>WENV183740656 PJUF01005503 [PJUF] feces metagenome; Chicken feces (3) enriched on wood chips 315 399 + Leu TAG [ENA] ¢þ
>WENV183745193 PJUL01005116 [PJUL] feces metagenome; Chicken feces enriched on filter paper 720 636 - Leu TAG [ENA] ¢þ
>WENV170003672 AGTN01413771 [AGTN] bioreactor metagenome; poplar biomass 244 328 + Leu TAG [ENA] ¢þ
>WENV170298656 CESF01166960 [CESF] marine metagenome genome assembly TARA_093_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 493 409 - Leu TAG [ENA] ¢þ
>WENV170650115 JRYD01012127 [JRYD] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 2 ppm DO 11508 11592 + Leu TAG [ENA] ¢þ
>WENV170652265 JRYH01000430 [JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and 9349 9265 - Leu TAG [ENA] ¢þ
>WENV170653091 JRYI01002863 [JRYI] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 1 ppm DO 1863 1947 + Leu TAG [ENA] ¢þ
>WENV170709014 LNFM01000069 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 295455 295371 - Leu TAG [ENA] ¢þ
>WENV170709230 LNFM01000206 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 263780 263696 - Leu TAG [ENA] ¢þ
>WENV170710468 LNFM01001835 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 9576 9660 + Leu TAG [ENA] ¢þ
>WENV170884383 MDTC01182949 [MDTC] marine metagenome; seawater 13542 13458 - Leu TAG [ENA] ¢þ
>WENV170961885 MLJW01004518 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 1323 1239 - Leu TAG [ENA] ¢þ
>WENV170984401 MWVV01269239 [MWVV] soil metagenome; PT-2 sample; Antarctic (ecotone) soil 238 154 - Leu TAG [ENA] ¢þ
>C181041874 CP019966 Alphaproteobacteria Rhodopseudomonas palustris PS3 [CP019966] 3271689 3271605 - Leu TAG - ¡û
>C181041920 CP019967 Alphaproteobacteria Rhodopseudomonas palustris YSC3 [CP019967] 3296580 3296496 - Leu TAG - ¡û
>C191171947 CP039740 Alphaproteobacteria Pseudolabrys sp. FHR47 [CP039740] 2268602 2268686 + Leu TAG - ¡û
>W09103022 AAIS01000006 Alphaproteobacteria Nitrobacter hamburgensis X14 [AAIS] 143348 143432 + Leu TAG [ENA] ¡û
>W09104373 AALQ01000003 Alphaproteobacteria Rhodopseudomonas palustris HaA2 [AALQ] 609137 609053 - Leu TAG [ENA] ¡û
>W09104412 AALR01000004 Alphaproteobacteria Rhodopseudomonas palustris BisB18 [AALR] 223995 223911 - Leu TAG [ENA] ¡û
>W09107578 ABJR01000001 Alphaproteobacteria Rhodopseudomonas palustris TIE-1 [ABJR] 1552495 1552411 - Leu TAG [ENA] ¡û
>W1910182845 BJNF01000050 Alphaproteobacteria Nitrobacter winogradskyi NBRC 14297 [BJNF] 31667 31583 - Leu TAG [ENA] ¡û
>W1910548951 FZOX01000002 Alphaproteobacteria Tardiphaga sp. OK246 [FZOX] 1118635 1118551 - Leu TAG [ENA] ¡û
>C09108134 CP001196 Alphaproteobacteria Afipia carboxidovorans OM5 OM5; ATCC 49405 [CP001196] 1822340 1822424 + Leu TAG - ¡û
>W1911219131 NRSI01000001 Alphaproteobacteria Rhodopseudomonas palustris DSM 126 [NRSI] 234483 234567 + Leu TAG [ENA] ¡û
>W1911653502 QDFX01000002 Alphaproteobacteria Rhizobiaceae bacterium CPCC 101076 [QDFX] 204422 204338 - Leu TAG [ENA] ¡û
>W1911760571 QWVU01000030 Alphaproteobacteria Rhodopseudomonas palustris R1 [QWVU] 68978 68894 - Leu TAG [ENA] ¡û
>W1911809174 QYYC01000036 Alphaproteobacteria Rhodopseudomonas palustris 2.1.37 [QYYC] 21284 21368 + Leu TAG [ENA] ¡û
>W1810576969 QENW01000013 Alphaproteobacteria Tardiphaga sp. OV697 [QENW] 116730 116814 + Leu TAG [ENA] ¡û
>W1810679430 QKQS01000013 Alphaproteobacteria Rhodopseudomonas palustris XCP [QKQS] 256779 256695 - Leu TAG [ENA] ¡û
>W1810706687 QMKH01000006 Alphaproteobacteria Microvirga flavescens c27j1 [QMKH] 163833 163917 + Leu TAG [ENA] ¡û
>W1810720674 QNRK01000023 Alphaproteobacteria Roseiarcus fermentans DSM 24875 [QNRK] 46598 46682 + Leu TAG [ENA] ¡û
>W1810784352 QRAQ01000001 Alphaproteobacteria Tardiphaga sp. CF115 [QRAQ] 36275 36359 + Leu TAG [ENA] ¡û
>W1810787489 QRDT01000001 Alphaproteobacteria Rhodopseudomonas pentothenatexigens JA575 [QRDT] 12835 12919 + Leu TAG [ENA] ¡û
>W1810789376 QRGO01000003 Alphaproteobacteria Undibacter mobilis GY_H [QRGO] 303898 303814 - Leu TAG [ENA] ¡û
>W1810884386 QUMP01000001 Alphaproteobacteria Rhodopseudomonas thermotolerans JA576,NBRC 108863,KCTC 15144 [QUMP] 12835 12919 + Leu TAG [ENA] ¡û
>W10110079 ADBQ01000006 Alphaproteobacteria Ancylobacter novellus DSM 506 [ADBQ] 37879 37963 + Leu TAG [ENA] ¡û
>W10112838 ADFI01000030 Alphaproteobacteria Rhodopseudomonas palustris DX-1 [ADFI] 17214 17130 - Leu TAG [ENA] ¡û
>C10110770 CP001096 Alphaproteobacteria Rhodopseudomonas palustris TIE-1 [CP001096] 3567960 3567876 - Leu TAG [Ensembl] ¡û
>C10112213 CP002026 Alphaproteobacteria Ancylobacter novellus DSM 506 [CP002026] 2318175 2318091 - Leu TAG [Ensembl] ¡û
>W11112516 ADBQ01000006 Alphaproteobacteria Ancylobacter novellus DSM 506 [ADBQ] 37879 37963 + Leu TAG [ENA] ¡û
>C11116284 CP002821 Alphaproteobacteria Afipia carboxidovorans OM4 [CP002821] 2303267 2303183 - Leu TAG [Ensembl] ¡û
>W11116065 ADFI01000030 Alphaproteobacteria Rhodopseudomonas palustris DX-1 [ADFI] 17214 17130 - Leu TAG [ENA] ¡û
>C11118751 CP002418 Alphaproteobacteria Rhodopseudomonas palustris [CP002418] 2671639 2671723 + Leu TAG [Ensembl] ¡û
>W1511705981 LGTB01000004 Alphaproteobacteria Bradyrhizobium viridifuturi SEMIA 690 [LGTB] 8981 9065 + Leu TAG [ENA] ¡û
>C121003004 CP002826 Alphaproteobacteria Afipia carboxidovorans OM5 [CP002826] 2302146 2302062 - Leu TAG - ¡û
>W1610649530 LJIC01000091 Alphaproteobacteria Rhodopseudomonas sp. AAP120 [LJIC] 8063 7979 - Leu TAG [ENA] ¡û
>W1610726569 LMFS01000001 Alphaproteobacteria Pseudolabrys sp. Root1462 [LMFS] 1777662 1777746 + Leu TAG [ENA] ¡û
>W1610978979 LVYV01000003 Alphaproteobacteria Tardiphaga robiniae [LVYV] 193788 193704 - Leu TAG [ENA] ¡û
>W1710505285 FMTP01000001 Alphaproteobacteria Ancylobacter rudongensis [FMTP] 486621 486705 + Leu TAG [ENA] ¡û
>W1710536656 FNTI01000002 Alphaproteobacteria Bradyrhizobium lablabi [FNTI] 65446 65530 + Leu TAG [ENA] ¡û
>W1710540673 FNWZ01000003 Alphaproteobacteria Tardiphaga sp. OK245 [FNWZ] 856505 856421 - Leu TAG [ENA] ¡û
>W1710568417 FOTP01000002 Alphaproteobacteria Bradyrhizobium sp. NFR13 [FOTP] 49440 49524 + Leu TAG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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