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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.126664 (90 seq.)
>W1710909273
LNQJ01000001
Actinomycetota
Arthrobacter sp. NIO-1057 [LNQJ]
690932
690857
-
Pro
TGG
[ENA]
¡û
>W1710909274
LNQJ01000001
Actinomycetota
Arthrobacter sp. NIO-1057 [LNQJ]
690715
690640
-
Pro
TGG
[ENA]
¡û
>W1710909275
LNQJ01000001
Actinomycetota
Arthrobacter sp. NIO-1057 [LNQJ]
690483
690408
-
Pro
TGG
[ENA]
¡û
>W1710916126
LNUU01000001
Actinomycetota
Arthrobacter sp. EpRS66 [LNUU]
188607
188682
+
Pro
TGG
[ENA]
¡û
>W1710916127
LNUU01000001
Actinomycetota
Arthrobacter sp. EpRS66 [LNUU]
188821
188896
+
Pro
TGG
[ENA]
¡û
>W1710916128
LNUU01000001
Actinomycetota
Arthrobacter sp. EpRS66 [LNUU]
189053
189128
+
Pro
TGG
[ENA]
¡û
>W1711113350
LTYF01000074
Actinomycetota
Micrococcus sp. HMSC067E09 [LTYF]
17537
17462
-
Pro
TGG
[ENA]
¡û
>W131087288
AOCK01000012
Actinomycetota
Paeniglutamicibacter gangotriensis Lz1y [AOCK]
135770
135845
+
Pro
TGG
[ENA]
¡û
>W131210571
ATKN01000011
Actinomycetota
Arthrobacter sp. PAO19 [ATKN]
240
165
-
Pro
TGG
[ENA]
¡û
>W1711603243
MOLR01000017
Actinomycetota
Arthrobacter sp. UCD-GKA [MOLR]
51682
51757
+
Pro
TGG
[ENA]
¡û
>W1711618460
MPBI01000001
Actinomycetota
Glutamicibacter sp. 0426 [MPBI]
691321
691396
+
Pro
TGG
[ENA]
¡û
>W1711618461
MPBI01000001
Actinomycetota
Glutamicibacter sp. 0426 [MPBI]
691538
691613
+
Pro
TGG
[ENA]
¡û
>W1711618462
MPBI01000001
Actinomycetota
Glutamicibacter sp. 0426 [MPBI]
691769
691844
+
Pro
TGG
[ENA]
¡û
>C171073415
CP018135
Actinomycetota
Neomicrococcus aestuarii B18 [CP018135]
463534
463609
+
Pro
TGG
-
¡û
>WENV170561764
CZCA01027172
[CZCA] anaerobic digester metagenome; anaerobic digester
403
328
-
Pro
TGG
[ENA]
¢þ
>C191100401
CP033081
Actinomycetota
Glutamicibacter nicotianae OTC-16 [CP033081]
2020885
2020810
-
Pro
TGG
-
¡û
>C191100402
CP033081
Actinomycetota
Glutamicibacter nicotianae OTC-16 [CP033081]
2020668
2020593
-
Pro
TGG
-
¡û
>C191100403
CP033081
Actinomycetota
Glutamicibacter nicotianae OTC-16 [CP033081]
2020437
2020362
-
Pro
TGG
-
¡û
>C191124728
CP034412
Actinomycetota
Glutamicibacter creatinolyticus LGCM 259 [CP034412]
1854152
1854077
-
Pro
TGG
-
¡û
>C191124729
CP034412
Actinomycetota
Glutamicibacter creatinolyticus LGCM 259 [CP034412]
1853917
1853842
-
Pro
TGG
-
¡û
>W141563816
JIAG01000010
Actinomycetota
Haematomicrobium sanguinis DSM 21259 [JIAG]
60029
59954
-
Pro
TGG
[ENA]
¡û
>W1910182771
BJNE01000001
Actinomycetota
Glutamicibacter nicotianae NBRC 14234 [BJNE]
6
81
+
Pro
TGG
[ENA]
¡û
>W1910182800
BJNE01000007
Actinomycetota
Glutamicibacter nicotianae NBRC 14234 [BJNE]
79
4
-
Pro
TGG
[ENA]
¡û
>W1910183701
BJNY01000010
Actinomycetota
Glutamicibacter uratoxydans NBRC 15515 [BJNY]
55562
55487
-
Pro
TGG
[ENA]
¡û
>W1910183702
BJNY01000010
Actinomycetota
Glutamicibacter uratoxydans NBRC 15515 [BJNY]
55333
55258
-
Pro
TGG
[ENA]
¡û
>W1910377698
FUKP01000050
Actinomycetota
Micrococcus lylae 2B3F [FUKP]
27792
27867
+
Pro
TGG
[ENA]
¡û
>W1910941554
NJFJ02000001
Actinomycetota
Micrococcus sp. FDAARGOS_333 [NJFJ]
1570753
1570828
+
Pro
TGG
[ENA]
¡û
>W1911203375
NRGT01000041
Actinomycetota
Glutamicibacter sp. BW77 [NRGT]
74352
74427
+
Pro
TGG
[ENA]
¡û
>W1911203487
NRGV01000030
Actinomycetota
Glutamicibacter sp. BW80 [NRGV]
225637
225562
-
Pro
TGG
[ENA]
¡û
>W1911567603
PCPS01000001
Actinomycetota
Arthrobacter sp. MYb229 [PCPS]
799667
799742
+
Pro
TGG
[ENA]
¡û
>W1911567672
PCPT01000003
Actinomycetota
Arthrobacter sp. MYb227 [PCPT]
119617
119692
+
Pro
TGG
[ENA]
¡û
>W1911567720
PCPU01000001
Actinomycetota
Arthrobacter sp. MYb224 [PCPU]
417708
417633
-
Pro
TGG
[ENA]
¡û
>W1911567807
PCPV01000014
Actinomycetota
Arthrobacter sp. MYb222 [PCPV]
1
76
+
Pro
TGG
[ENA]
¡û
>W1911567808
PCPV01000014
Actinomycetota
Arthrobacter sp. MYb222 [PCPV]
233
308
+
Pro
TGG
[ENA]
¡û
>W1911567857
PCPW01000003
Actinomycetota
Arthrobacter sp. MYb221 [PCPW]
39299
39224
-
Pro
TGG
[ENA]
¡û
>W1911567953
PCPY01000001
Actinomycetota
Arthrobacter sp. MYb216 [PCPY]
799613
799688
+
Pro
TGG
[ENA]
¡û
>W1911568032
PCPZ01000001
Actinomycetota
Arthrobacter sp. MYb214 [PCPZ]
699751
699676
-
Pro
TGG
[ENA]
¡û
>W1911568033
PCPZ01000001
Actinomycetota
Arthrobacter sp. MYb214 [PCPZ]
699519
699444
-
Pro
TGG
[ENA]
¡û
>W1911568034
PCPZ01000001
Actinomycetota
Arthrobacter sp. MYb214 [PCPZ]
699287
699212
-
Pro
TGG
[ENA]
¡û
>W1911568072
PCQA01000001
Actinomycetota
Arthrobacter sp. MYb213 [PCQA]
223632
223707
+
Pro
TGG
[ENA]
¡û
>W1911568139
PCQB01000002
Actinomycetota
Arthrobacter sp. MYb211 [PCQB]
344293
344368
+
Pro
TGG
[ENA]
¡û
>W1911595577
PNGL01000002
Actinomycetota
Micrococcus lylae UMB0955 [PNGL]
30924
30849
-
Pro
TGG
[ENA]
¡û
>W1911597755
PNQX01000001
Actinomycetota
Glutamicibacter arilaitensis JB182 [PNQX]
833436
833511
+
Pro
TGG
[ENA]
¡û
>W1911597756
PNQX01000001
Actinomycetota
Glutamicibacter arilaitensis JB182 [PNQX]
833652
833727
+
Pro
TGG
[ENA]
¡û
>W1911597757
PNQX01000001
Actinomycetota
Glutamicibacter arilaitensis JB182 [PNQX]
833883
833958
+
Pro
TGG
[ENA]
¡û
>W1810089816
PGEY01000001
Actinomycetota
Glutamicibacter mysorens DSM 12798 [PGEY]
1356288
1356213
-
Pro
TGG
[ENA]
¡û
>W1810089817
PGEY01000001
Actinomycetota
Glutamicibacter mysorens DSM 12798 [PGEY]
1356071
1355996
-
Pro
TGG
[ENA]
¡û
>W1810089818
PGEY01000001
Actinomycetota
Glutamicibacter mysorens DSM 12798 [PGEY]
1355840
1355765
-
Pro
TGG
[ENA]
¡û
>W1810201508
POAF01000001
Actinomycetota
Glutamicibacter soli NHPC-3 [POAF]
321111
321036
-
Pro
TGG
[ENA]
¡û
>W1810201509
POAF01000001
Actinomycetota
Glutamicibacter soli NHPC-3 [POAF]
320878
320803
-
Pro
TGG
[ENA]
¡û
>W1810707074
QMKQ01000001
Actinomycetota
Arthrobacter sp. AQ5-05 [QMKQ]
450770
450845
+
Pro
TGG
[ENA]
¡û
>C151092364
CP012171
Actinomycetota
Arthrobacter sp. LS16 [CP012171]
2130778
2130703
-
Pro
TGG
-
¡û
>C151092365
CP012171
Actinomycetota
Arthrobacter sp. LS16 [CP012171]
2130545
2130470
-
Pro
TGG
-
¡û
>C11100110
FQ311875
Actinomycetota
Glutamicibacter arilaitensis Re117 [FQ311875]
2105857
2105782
-
Pro
TGG
[Ensembl]
¡û
>C11100111
FQ311875
Actinomycetota
Glutamicibacter arilaitensis Re117 [FQ311875]
2105640
2105565
-
Pro
TGG
[Ensembl]
¡û
>C11100112
FQ311875
Actinomycetota
Glutamicibacter arilaitensis Re117 [FQ311875]
2105409
2105334
-
Pro
TGG
[Ensembl]
¡û
>W1511483928
JWMD01000007
Actinomycetota
Arthrobacter sp. W1 [JWMD]
82477
82552
+
Pro
TGG
[ENA]
¡û
>W1511483929
JWMD01000007
Actinomycetota
Arthrobacter sp. W1 [JWMD]
82694
82769
+
Pro
TGG
[ENA]
¡û
>W1511483930
JWMD01000007
Actinomycetota
Arthrobacter sp. W1 [JWMD]
82925
83000
+
Pro
TGG
[ENA]
¡û
>W1511624354
LCYH01000016
Actinomycetota
Arthrobacter sp. YC-RL1 [LCYH]
897119
897044
-
Pro
TGG
[ENA]
¡û
>W1511624355
LCYH01000016
Actinomycetota
Arthrobacter sp. YC-RL1 [LCYH]
896886
896811
-
Pro
TGG
[ENA]
¡û
>C161045466
CP012750
Actinomycetota
Glutamicibacter halophytocola KLBMP 5180 [CP012750]
2096304
2096229
-
Pro
TGG
[Ensembl]
¡û
>C161045467
CP012750
Actinomycetota
Glutamicibacter halophytocola KLBMP 5180 [CP012750]
2096086
2096011
-
Pro
TGG
[Ensembl]
¡û
>C161045468
CP012750
Actinomycetota
Glutamicibacter halophytocola KLBMP 5180 [CP012750]
2095854
2095779
-
Pro
TGG
[Ensembl]
¡û
>C161055106
CP013297
Actinomycetota
Arthrobacter sp. YC-RL1 [CP013297]
1806008
1806083
+
Pro
TGG
[Ensembl]
¡û
>C161055107
CP013297
Actinomycetota
Arthrobacter sp. YC-RL1 [CP013297]
1806241
1806316
+
Pro
TGG
[Ensembl]
¡û
>W1610041884
BAXF01000176
Actinomycetota
Arthrobacter sp. JCM 19049 [BAXF]
2883
2808
-
Pro
TGG
[ENA]
¡û
>W1610067397
BCQO01000001
Actinomycetota
Glutamicibacter mysorens NBRC 103060 [BCQO]
734395
734320
-
Pro
TGG
[ENA]
¡û
>W1610067398
BCQO01000001
Actinomycetota
Glutamicibacter mysorens NBRC 103060 [BCQO]
734178
734103
-
Pro
TGG
[ENA]
¡û
>W1610067399
BCQO01000001
Actinomycetota
Glutamicibacter mysorens NBRC 103060 [BCQO]
733947
733872
-
Pro
TGG
[ENA]
¡û
>W1610069493
BCSN01000020
Actinomycetota
Micrococcus lylae NBRC 15355 [BCSN]
14857
14932
+
Pro
TGG
[ENA]
¡û
>W1610112326
CZJT01000111
Actinomycetota
Paeniglutamicibacter antarcticus [CZJT]
16388
16463
+
Pro
TGG
[ENA]
¡û
>W1610515064
FMAT01000001
Actinomycetota
Arthrobacter sp. NIO-1057 [FMAT]
690932
690857
-
Pro
TGG
[ENA]
¡û
>W1610515065
FMAT01000001
Actinomycetota
Arthrobacter sp. NIO-1057 [FMAT]
690715
690640
-
Pro
TGG
[ENA]
¡û
>W1610515066
FMAT01000001
Actinomycetota
Arthrobacter sp. NIO-1057 [FMAT]
690483
690408
-
Pro
TGG
[ENA]
¡û
>W1610767632
LNQJ01000001
Actinomycetota
Arthrobacter sp. NIO-1057 [LNQJ]
690932
690857
-
Pro
TGG
[ENA]
¡û
>W1610767633
LNQJ01000001
Actinomycetota
Arthrobacter sp. NIO-1057 [LNQJ]
690715
690640
-
Pro
TGG
[ENA]
¡û
>W1610767634
LNQJ01000001
Actinomycetota
Arthrobacter sp. NIO-1057 [LNQJ]
690483
690408
-
Pro
TGG
[ENA]
¡û
>W1610774365
LNUU01000001
Actinomycetota
Arthrobacter sp. EpRS66 [LNUU]
188607
188682
+
Pro
TGG
[ENA]
¡û
>W1610774366
LNUU01000001
Actinomycetota
Arthrobacter sp. EpRS66 [LNUU]
188821
188896
+
Pro
TGG
[ENA]
¡û
>W1610774367
LNUU01000001
Actinomycetota
Arthrobacter sp. EpRS66 [LNUU]
189053
189128
+
Pro
TGG
[ENA]
¡û
>W1710038978
BAXF01000176
Actinomycetota
Arthrobacter sp. JCM 19049 [BAXF]
2883
2808
-
Pro
TGG
[ENA]
¡û
>W1710064770
BCQO01000001
Actinomycetota
Glutamicibacter mysorens NBRC 103060 [BCQO]
734395
734320
-
Pro
TGG
[ENA]
¡û
>W1710064771
BCQO01000001
Actinomycetota
Glutamicibacter mysorens NBRC 103060 [BCQO]
734178
734103
-
Pro
TGG
[ENA]
¡û
>W1710064772
BCQO01000001
Actinomycetota
Glutamicibacter mysorens NBRC 103060 [BCQO]
733947
733872
-
Pro
TGG
[ENA]
¡û
>W1710066866
BCSN01000020
Actinomycetota
Micrococcus lylae NBRC 15355 [BCSN]
14857
14932
+
Pro
TGG
[ENA]
¡û
>W1710115030
CZJT01000111
Actinomycetota
Paeniglutamicibacter antarcticus [CZJT]
16388
16463
+
Pro
TGG
[ENA]
¡û
>W1710500754
FMAT01000001
Actinomycetota
Arthrobacter sp. NIO-1057 [FMAT]
690932
690857
-
Pro
TGG
[ENA]
¡û
>W1710500755
FMAT01000001
Actinomycetota
Arthrobacter sp. NIO-1057 [FMAT]
690715
690640
-
Pro
TGG
[ENA]
¡û
>W1710500756
FMAT01000001
Actinomycetota
Arthrobacter sp. NIO-1057 [FMAT]
690483
690408
-
Pro
TGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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