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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
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1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.127050 (70 seq.)
>W1710809591
LKEQ01000006
Alphaproteobacteria
Wolbachia endosymbiont of Trichogramma pretiosum [LKEQ]
90681
90758
+
Arg
ACG
[ENA]
¡û
>W1711055043
LRUH01000017
Alphaproteobacteria
Wolbachia endosymbiont of Laodelphax striatellus of Laodelphax striatella [LRUH]
8090
8167
+
Arg
ACG
[ENA]
¡û
>W1711088449
LSYX01000098
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYX]
2573
2650
+
Arg
ACG
[ENA]
¡û
>W1711088492
LSYY01000152
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYY]
13164
13087
-
Arg
ACG
[ENA]
¡û
>W1711258829
LYUV01000054
Alphaproteobacteria
Wolbachia endosymbiont of Nomada leucophthalma [LYUV]
7768
7691
-
Arg
ACG
[ENA]
¡û
>W1711258861
LYUW01000049
Alphaproteobacteria
Wolbachia endosymbiont of Nomada flava [LYUW]
8923
8846
-
Arg
ACG
[ENA]
¡û
>W1711258896
LYUX01000051
Alphaproteobacteria
Wolbachia endosymbiont of Nomada panzeri [LYUX]
8930
8853
-
Arg
ACG
[ENA]
¡û
>W1711258921
LYUY01000020
Alphaproteobacteria
Wolbachia endosymbiont of Nomada ferruginata [LYUY]
5476
5553
+
Arg
ACG
[ENA]
¡û
>W1711466333
MJMG01000008
Alphaproteobacteria
Wolbachia pipientis [MJMG]
34159
34234
+
Arg
ACG
[ENA]
¡û
>W1711745697
MUJL01000003
Alphaproteobacteria
Wolbachia pipientis wUni [MUJL]
11838
11761
-
Arg
ACG
[ENA]
¡û
>W1711745752
MUJM01000095
Alphaproteobacteria
Wolbachia pipientis wVitA [MUJM]
9454
9377
-
Arg
ACG
[ENA]
¡û
>W1712108429
NJBR01000029
Alphaproteobacteria
Wolbachia endosymbiont of Wuchereria bancrofti [NJBR]
35795
35872
+
Arg
ACG
[ENA]
¡û
>W131052806
AMZJ01000012
Alphaproteobacteria
Wolbachia endosymbiont of Diaphorina citri [AMZJ]
28885
28962
+
Arg
ACG
[ENA]
¡û
>W131242630
CAOH01000020
Alphaproteobacteria
Wolbachia pipientis wBol1-b [CAOH]
8454
8531
+
Arg
ACG
[ENA]
¡û
>W131243097
CAOU02000001
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila suzukii str. valsugana of Drosophila suzukii [CAOU]
45051
44974
-
Arg
ACG
[ENA]
¡û
>C026852
AE017196
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila melanogaster wMel [AE017196]
44542
44465
-
Arg
ACG
[Ensembl]
¡û
>C026863
AE017321
Alphaproteobacteria
Wolbachia endosymbiont strain TRS of Brugia malayi [AE017321]
929501
929578
+
Arg
ACG
[Ensembl]
¡û
>W141001030
ADHD01000407
Alphaproteobacteria
Wolbachia endosymbiont of Wuchereria bancrofti [ADHD]
396
473
+
Arg
ACG
[ENA]
¡û
>W141065618
AQQE01000008
Alphaproteobacteria
Wolbachia pipientis wMelPop [AQQE]
10133
10056
-
Arg
ACG
[ENA]
¡û
>WENV181405238
OGCC01000406
[OGCC] insect metagenome; haemolymph
516
590
+
Arg
ACG
[ENA]
¢þ
>WENV181405272
OGCD01000002
[OGCD] insect metagenome; haemolymph
20516
20442
-
Arg
ACG
[ENA]
¢þ
>WENV181406096
OGCF01000114
[OGCF] insect metagenome; haemolymph
3785
3711
-
Arg
ACG
[ENA]
¢þ
>W141240211
CAGB01000019
Alphaproteobacteria
Wolbachia pipientis wAlbB [CAGB]
15461
15384
-
Arg
ACG
[ENA]
¡û
>C08011394
AM999887
Alphaproteobacteria
Wolbachia endosymbiont of Culex quinquefasciatus Pel wPip [AM999887]
231737
231814
+
Arg
ACG
[Ensembl]
¡û
>C181017578
CP015510
Alphaproteobacteria
Wolbachia endosymbiont of Folsomia candida Berlin [CP015510]
78553
78476
-
Arg
ACG
-
¡û
>C191074325
CP031221
Alphaproteobacteria
Wolbachia pipientis wAlbB [CP031221]
897740
897817
+
Arg
ACG
-
¡û
>C191123097
CP034333
Alphaproteobacteria
Wolbachia endosymbiont of Brugia malayi [CP034333]
262027
262102
+
Arg
ACG
-
¡û
>C191123153
CP034334
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila mauritiana wMau [CP034334]
488559
488482
-
Arg
ACG
-
¡û
>C191123187
CP034335
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila mauritiana wMau [CP034335]
488562
488485
-
Arg
ACG
-
¡û
>C191188714
CP041215
Alphaproteobacteria
Wolbachia endosymbiont of Carposina sasakii [CP041215]
474567
474644
+
Arg
ACG
-
¡û
>W09113860
ABZA01000002
Alphaproteobacteria
Wolbachia endosymbiont of Culex quinquefasciatus of Culex quinquefasciatus JHB [ABZA]
130359
130282
-
Arg
ACG
[ENA]
¡û
>W09121817
ACFP01000218
Alphaproteobacteria
Wolbachia endosymbiont of Muscidifurax uniraptor [ACFP]
1059
1136
+
Arg
ACG
[ENA]
¡û
>W141812268
JQAM01000001
Alphaproteobacteria
Wolbachia pipientis [JQAM]
92351
92274
-
Arg
ACG
[ENA]
¡û
>C09111287
CP001391
Alphaproteobacteria
Wolbachia sp. wRi [CP001391]
45042
44965
-
Arg
ACG
[Ensembl]
¡û
>W1910213462
FMKF01000043
Alphaproteobacteria
Wolbachia endosymbiont of Bemisia tabaci [FMKF]
4246
4169
-
Arg
ACG
[ENA]
¡û
>W1910753973
MKIF01000138
Alphaproteobacteria
Wolbachia sp. wRi [MKIF]
1431
1508
+
Arg
ACG
[ENA]
¡û
>W1910759021
MLZJ01000005
Alphaproteobacteria
Wolbachia sp. wMel_KL [MLZJ]
7045
6968
-
Arg
ACG
[ENA]
¡û
>W1910760267
MNCG01000004
Alphaproteobacteria
Wolbachia sp. wMel_AMD [MNCG]
7045
6968
-
Arg
ACG
[ENA]
¡û
>W1910794362
MRWX01000023
Alphaproteobacteria
Wolbachia pipientis wAus [MRWX]
11241
11318
+
Arg
ACG
[ENA]
¡û
>W1910802346
MSYL01000007
Alphaproteobacteria
Wolbachia sp. wRi_2 [MSYL]
1431
1508
+
Arg
ACG
[ENA]
¡û
>W1911239464
NSDR01000087
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_India [NSDR]
6759
6836
+
Arg
ACG
[ENA]
¡û
>W1911239489
NSDS01000040
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_Hawaii [NSDS]
9715
9638
-
Arg
ACG
[ENA]
¡û
>W1911239515
NSDT01000011
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_Indonesia [NSDT]
6759
6836
+
Arg
ACG
[ENA]
¡û
>W1911281088
NTHL01000001
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila subpulchrella of Drosophila subpulchrella wSpc [NTHL]
28795
28718
-
Arg
ACG
[ENA]
¡û
>W1911412168
NWVH01000099
Alphaproteobacteria
Wolbachia pipientis FL2016 [NWVH]
841
918
+
Arg
ACG
[ENA]
¡û
>W1911412180
NWVI01000008
Alphaproteobacteria
Wolbachia pipientis HN2016 [NWVI]
12770
12693
-
Arg
ACG
[ENA]
¡û
>W1911412235
NWVJ01000049
Alphaproteobacteria
Wolbachia pipientis HN2016 [NWVJ]
17601
17524
-
Arg
ACG
[ENA]
¡û
>W1911412263
NWVK01000015
Alphaproteobacteria
Wolbachia pipientis FL2016 [NWVK]
20438
20515
+
Arg
ACG
[ENA]
¡û
>W1911545122
OUNE01000147
Alphaproteobacteria
Wolbachia endosymbiont of Aleurodicus dispersus WBAD (OUNE) of Aleurodicus dispersus WBAD [OUNE]
11336
11259
-
Arg
ACG
[ENA]
¡û
>W1911545158
OUNF01000376
Alphaproteobacteria
Wolbachia endosymbiont of Aleurodicus floccissimus WBAF (OUNF) of Aleurodicus floccissimus WBAF [OUNF]
907
830
-
Arg
ACG
[ENA]
¡û
>W1810758332
QPIP01000006
Alphaproteobacteria
Wolbachia endosymbiont of Cylisticus convexus of Cylisticus convexus Wcon [QPIP]
41592
41669
+
Arg
ACG
[ENA]
¡û
>C151001148
AP013028
Alphaproteobacteria
Wolbachia endosymbiont of Cimex lectularius wCle [AP013028]
474365
474288
-
Arg
ACG
[Ensembl]
¡û
>C151101117
HG810405
Alphaproteobacteria
Wolbachia endosymbiont of Onchocerca volvulus str. Cameroon [HG810405]
159523
159449
-
Arg
ACG
-
¡û
>C151102233
LK055284
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wAu [LK055284]
43425
43348
-
Arg
ACG
[Ensembl]
¡û
>W1510562596
CTEH01000001
Alphaproteobacteria
Wolbachia endosymbiont of Culex molestus wPip_Mol of Culex molestus [CTEH]
328089
328012
-
Arg
ACG
[ENA]
¡û
>W1511183990
JMCJ01001051
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus of Dactylopius coccus wCoc1 [JMCJ]
4376
4453
+
Arg
ACG
[ENA]
¡û
>W1511536213
JYPC01000011
Alphaproteobacteria
Wolbachia endosymbiont of Operophtera brumata of Operophtera brumata Ob_Wba [JYPC]
2641
2718
+
Arg
ACG
[ENA]
¡û
>W11145933
AERW01000060
Alphaproteobacteria
Wolbachia endosymbiont of Nasonia vitripennis wVitB of Nasonia vitripennis [AERW]
4839
4916
+
Arg
ACG
[ENA]
¡û
>W11185723
CACK01000056
Alphaproteobacteria
Wolbachia endosymbiont of Culex pipiens molestus [CACK]
14052
13975
-
Arg
ACG
[ENA]
¡û
>C131019588
HE660029
Alphaproteobacteria
Wolbachia endosymbiont of Onchocerca ochengi wOo [HE660029]
523327
523253
-
Arg
ACG
[Ensembl]
¡û
>C131009127
CP003883
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wNo [CP003883]
1256740
1256663
-
Arg
ACG
[Ensembl]
¡û
>C131009171
CP003884
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wHa [CP003884]
44659
44582
-
Arg
ACG
[Ensembl]
¡û
>W1610673697
LKEQ01000006
Alphaproteobacteria
Wolbachia endosymbiont of Trichogramma pretiosum [LKEQ]
90681
90758
+
Arg
ACG
[ENA]
¡û
>W1610896089
LRUH01000017
Alphaproteobacteria
Wolbachia endosymbiont of Laodelphax striatellus of Laodelphax striatella [LRUH]
8090
8167
+
Arg
ACG
[ENA]
¡û
>W1610922988
LSYX01000098
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYX]
2573
2650
+
Arg
ACG
[ENA]
¡û
>W1610923031
LSYY01000152
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYY]
13164
13087
-
Arg
ACG
[ENA]
¡û
>W1611021094
LYUV01000054
Alphaproteobacteria
Wolbachia endosymbiont of Nomada leucophthalma [LYUV]
7768
7691
-
Arg
ACG
[ENA]
¡û
>W1611021126
LYUW01000049
Alphaproteobacteria
Wolbachia endosymbiont of Nomada flava [LYUW]
8923
8846
-
Arg
ACG
[ENA]
¡û
>W1611021161
LYUX01000051
Alphaproteobacteria
Wolbachia endosymbiont of Nomada panzeri [LYUX]
8930
8853
-
Arg
ACG
[ENA]
¡û
>W1611021186
LYUY01000020
Alphaproteobacteria
Wolbachia endosymbiont of Nomada ferruginata [LYUY]
5476
5553
+
Arg
ACG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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