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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.146646 (278 seq.)
>W1710799934
LJVG01000040
Gammaproteobacteria
Colwellia sp. MT2012 [LJVG]
37605
37529
-
Pro
TGG
[ENA]
¡û
>W1710799937
LJVG01000040
Gammaproteobacteria
Colwellia sp. MT2012 [LJVG]
37250
37174
-
Pro
TGG
[ENA]
¡û
>W1710799938
LJVG01000040
Gammaproteobacteria
Colwellia sp. MT2012 [LJVG]
37059
36983
-
Pro
TGG
[ENA]
¡û
>W1710803988
LJYX01000017
Gammaproteobacteria
Colwellia sp. TT2012 [LJYX]
719279
719203
-
Pro
TGG
[ENA]
¡û
>W1710803991
LJYX01000017
Gammaproteobacteria
Colwellia sp. TT2012 [LJYX]
718923
718847
-
Pro
TGG
[ENA]
¡û
>W1710803992
LJYX01000017
Gammaproteobacteria
Colwellia sp. TT2012 [LJYX]
718732
718656
-
Pro
TGG
[ENA]
¡û
>W1710804016
LJYX01000021
Gammaproteobacteria
Colwellia sp. TT2012 [LJYX]
512019
512095
+
Pro
TGG
[ENA]
¡û
>W1711055118
LRUI01000012
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [LRUI]
77837
77913
+
Pro
TGG
[ENA]
¡û
>W1711055121
LRUI01000012
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [LRUI]
81416
81492
+
Pro
TGG
[ENA]
¡û
>W1711078265
LSMS01000102
Gammaproteobacteria
Colwellia sp. Phe_37 [LSMS]
3009
3085
+
Pro
TGG
[ENA]
¡û
>W1711078268
LSMS01000102
Gammaproteobacteria
Colwellia sp. Phe_37 [LSMS]
3488
3564
+
Pro
TGG
[ENA]
¡û
>W1711228270
LXWK01000015
Gammaproteobacteria
Rheinheimera sp. SA_1 [LXWK]
812142
812066
-
Pro
TGG
[ENA]
¡û
>W1711228273
LXWK01000015
Gammaproteobacteria
Rheinheimera sp. SA_1 [LXWK]
811776
811700
-
Pro
TGG
[ENA]
¡û
>W1711499178
MKQD01000056
Gammaproteobacteria
Thalassotalea sp. PP2-459 [MKQD]
64262
64186
-
Pro
TGG
[ENA]
¡û
>W1711499181
MKQD01000056
Gammaproteobacteria
Thalassotalea sp. PP2-459 [MKQD]
63962
63886
-
Pro
TGG
[ENA]
¡û
>W1711624655
MPHL01000004
Gammaproteobacteria
Colwellia sp. UCD-KL20 [MPHL]
58127
58051
-
Pro
TGG
[ENA]
¡û
>W1711624658
MPHL01000004
Gammaproteobacteria
Colwellia sp. UCD-KL20 [MPHL]
57823
57747
-
Pro
TGG
[ENA]
¡û
>W1711767366
MUZU01000001
Gammaproteobacteria
Pseudocolwellia agarivorans QM50 [MUZU]
403116
403040
-
Pro
TGG
[ENA]
¡û
>W1711767369
MUZU01000001
Gammaproteobacteria
Pseudocolwellia agarivorans QM50 [MUZU]
402812
402736
-
Pro
TGG
[ENA]
¡û
>W1711767445
MUZV01000004
Gammaproteobacteria
Cognaticolwellia aestuarii [MUZV]
162537
162461
-
Pro
TGG
[ENA]
¡û
>W1711767448
MUZV01000004
Gammaproteobacteria
Cognaticolwellia aestuarii [MUZV]
162154
162078
-
Pro
TGG
[ENA]
¡û
>W1711947405
NBOC01000001
Gammaproteobacteria
Colwellia chukchiensis [NBOC]
483514
483590
+
Pro
TGG
[ENA]
¡û
>W1711947408
NBOC01000001
Gammaproteobacteria
Colwellia chukchiensis [NBOC]
483925
484001
+
Pro
TGG
[ENA]
¡û
>W1711947502
NBOD01000005
Gammaproteobacteria
Cognaticolwellia aestuarii [NBOD]
162569
162493
-
Pro
TGG
[ENA]
¡û
>W1711947505
NBOD01000005
Gammaproteobacteria
Cognaticolwellia aestuarii [NBOD]
162186
162110
-
Pro
TGG
[ENA]
¡û
>W1711947544
NBOE01000002
Gammaproteobacteria
Colwellia polaris [NBOE]
410906
410982
+
Pro
TGG
[ENA]
¡û
>W1711947547
NBOE01000002
Gammaproteobacteria
Colwellia polaris [NBOE]
411360
411436
+
Pro
TGG
[ENA]
¡û
>W1711947634
NBOF01000003
Gammaproteobacteria
Cognaticolwellia mytili [NBOF]
476508
476584
+
Pro
TGG
[ENA]
¡û
>W1711947637
NBOF01000003
Gammaproteobacteria
Cognaticolwellia mytili [NBOF]
476847
476923
+
Pro
TGG
[ENA]
¡û
>W1711947698
NBOG01000002
Gammaproteobacteria
Cognaticolwellia sediminilitoris [NBOG]
207805
207881
+
Pro
TGG
[ENA]
¡û
>W1711947701
NBOG01000002
Gammaproteobacteria
Cognaticolwellia sediminilitoris [NBOG]
208337
208413
+
Pro
TGG
[ENA]
¡û
>C171034460
CP014943
Gammaproteobacteria
Colwellia sp. PAMC 21821 [CP014943]
3086811
3086887
+
Pro
TGG
-
¡û
>C171034463
CP014943
Gammaproteobacteria
Colwellia sp. PAMC 21821 [CP014943]
3087456
3087532
+
Pro
TGG
-
¡û
>C171034568
CP014944
Gammaproteobacteria
Colwellia sp. PAMC 20917 [CP014944]
930014
929938
-
Pro
TGG
-
¡û
>C171034571
CP014944
Gammaproteobacteria
Colwellia sp. PAMC 20917 [CP014944]
929662
929586
-
Pro
TGG
-
¡û
>C171066064
CP017689
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [CP017689]
1076348
1076424
+
Pro
TGG
-
¡û
>C171066067
CP017689
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [CP017689]
1079927
1080003
+
Pro
TGG
-
¡û
>C171108360
CP020465
Gammaproteobacteria
Cognaticolwellia beringensis NB097-1 [CP020465]
3103882
3103958
+
Pro
TGG
-
¡û
>C171108363
CP020465
Gammaproteobacteria
Cognaticolwellia beringensis NB097-1 [CP020465]
3104423
3104499
+
Pro
TGG
-
¡û
>W131045915
AMRX01000007
Gammaproteobacteria
Gayadomonas joobiniege G7 [AMRX]
302125
302049
-
Pro
TGG
[ENA]
¡û
>W131045918
AMRX01000007
Gammaproteobacteria
Gayadomonas joobiniege G7 [AMRX]
301815
301739
-
Pro
TGG
[ENA]
¡û
>W131177224
ARKQ01000021
Gammaproteobacteria
Colwellia piezophila ATCC BAA-637 [ARKQ]
431
355
-
Pro
TGG
[ENA]
¡û
>W131177263
ARKQ01000048
Gammaproteobacteria
Colwellia piezophila ATCC BAA-637 [ARKQ]
15255
15331
+
Pro
TGG
[ENA]
¡û
>W131177266
ARKQ01000048
Gammaproteobacteria
Colwellia piezophila ATCC BAA-637 [ARKQ]
15699
15775
+
Pro
TGG
[ENA]
¡û
>C006820
CP000083
Gammaproteobacteria
Colwellia psychrerythraea 34H 34H; BAA-681 [CP000083]
4912504
4912580
+
Pro
TGG
[Ensembl]
¡û
>C006821
CP000083
Gammaproteobacteria
Colwellia psychrerythraea 34H 34H; BAA-681 [CP000083]
4913971
4914047
+
Pro
TGG
[Ensembl]
¡û
>C006831
CP000083
Gammaproteobacteria
Colwellia psychrerythraea 34H 34H; BAA-681 [CP000083]
3953529
3953453
-
Pro
TGG
[Ensembl]
¡û
>C006834
CP000083
Gammaproteobacteria
Colwellia psychrerythraea 34H 34H; BAA-681 [CP000083]
3953175
3953099
-
Pro
TGG
[Ensembl]
¡û
>WENV181305177
OFIF01011768
[OFIF] marine metagenome; seawater
295
371
+
Pro
TGG
[ENA]
¢þ
>WENV181316009
OFJR01011933
[OFJR] marine metagenome; seawater
198
274
+
Pro
TGG
[ENA]
¢þ
>WENV181319820
OFKE01031764
[OFKE] marine metagenome; seawater
317
393
+
Pro
TGG
[ENA]
¢þ
>WENV181414152
OGCL01000055
[OGCL] hot springs metagenome; Hot spring water
46598
46674
+
Pro
TGG
[ENA]
¢þ
>WENV181837308
OGVK01019315
[OGVK] freshwater metagenome; freshwater
106
30
-
Pro
TGG
[ENA]
¢þ
>WENV182540188
OJAE01001402
[OJAE] seawater metagenome; Sea water
274
350
+
Pro
TGG
[ENA]
¢þ
>WENV182540205
OJAF01000047
[OJAF] seawater metagenome; Sea water
550
626
+
Pro
TGG
[ENA]
¢þ
>WENV182540208
OJAF01000047
[OJAF] seawater metagenome; Sea water
991
1067
+
Pro
TGG
[ENA]
¢þ
>WENV182541878
OJAU01018634
[OJAU] seawater metagenome; Sea water
245
321
+
Pro
TGG
[ENA]
¢þ
>WENV182542007
OJAV01000258
[OJAV] seawater metagenome; Sea water
18897
18973
+
Pro
TGG
[ENA]
¢þ
>WENV182543078
OJAZ01029776
[OJAZ] seawater metagenome; Sea water
407
331
-
Pro
TGG
[ENA]
¢þ
>WENV182543449
OJBB01000275
[OJBB] seawater metagenome; Sea water
8271
8347
+
Pro
TGG
[ENA]
¢þ
>WENV182543629
OJBC01000009
[OJBC] seawater metagenome; Sea water
95122
95046
-
Pro
TGG
[ENA]
¢þ
>WENV182544568
OJBI01000005
[OJBI] seawater metagenome; Sea water
198224
198148
-
Pro
TGG
[ENA]
¢þ
>WENV182544570
OJBI01000005
[OJBI] seawater metagenome; Sea water
65403
65327
-
Pro
TGG
[ENA]
¢þ
>WENV182544738
OJBJ01000523
[OJBJ] seawater metagenome; Sea water
2434
2510
+
Pro
TGG
[ENA]
¢þ
>WENV182545071
OJBM01000010
[OJBM] seawater metagenome; Sea water
107554
107478
-
Pro
TGG
[ENA]
¢þ
>WENV182546989
OJBR01000071
[OJBR] seawater metagenome; Sea water
24539
24615
+
Pro
TGG
[ENA]
¢þ
>WENV182547473
OJBS01008793
[OJBS] seawater metagenome; Sea water
941
1017
+
Pro
TGG
[ENA]
¢þ
>WENV182547820
OJBT01012124
[OJBT] seawater metagenome; Sea water
71
147
+
Pro
TGG
[ENA]
¢þ
>WENV182549247
OJBY01000049
[OJBY] seawater metagenome; Sea water
20658
20734
+
Pro
TGG
[ENA]
¢þ
>WENV182551667
OJCF01002515
[OJCF] seawater metagenome; Sea water
412
336
-
Pro
TGG
[ENA]
¢þ
>WENV182552434
OJCK01000068
[OJCK] seawater metagenome; Sea water
64022
63946
-
Pro
TGG
[ENA]
¢þ
>WENV182554584
OJCW01000005
[OJCW] seawater metagenome; Sea water
58699
58623
-
Pro
TGG
[ENA]
¢þ
>WENV182554587
OJCW01000005
[OJCW] seawater metagenome; Sea water
58245
58169
-
Pro
TGG
[ENA]
¢þ
>WENV182555108
OJCY01002480
[OJCY] seawater metagenome; Sea water
2536
2612
+
Pro
TGG
[ENA]
¢þ
>WENV182556818
OJDH01000167
[OJDH] seawater metagenome; Sea water
25921
25997
+
Pro
TGG
[ENA]
¢þ
>WENV182556821
OJDH01000167
[OJDH] seawater metagenome; Sea water
26359
26435
+
Pro
TGG
[ENA]
¢þ
>WENV182557193
OJDI01001783
[OJDI] seawater metagenome; Sea water
2
78
+
Pro
TGG
[ENA]
¢þ
>WENV182557704
OJDK01002747
[OJDK] seawater metagenome; Sea water
1109
1185
+
Pro
TGG
[ENA]
¢þ
>WENV182557843
OJDL01000146
[OJDL] seawater metagenome; Sea water
18708
18784
+
Pro
TGG
[ENA]
¢þ
>WENV182558608
OJDN01000015
[OJDN] seawater metagenome; Sea water
64476
64400
-
Pro
TGG
[ENA]
¢þ
>WENV182558611
OJDN01000015
[OJDN] seawater metagenome; Sea water
64022
63946
-
Pro
TGG
[ENA]
¢þ
>WENV182559174
OJDO01002910
[OJDO] seawater metagenome; Sea water
2532
2456
-
Pro
TGG
[ENA]
¢þ
>WENV182559968
OJDR01000040
[OJDR] seawater metagenome; Sea water
4437
4513
+
Pro
TGG
[ENA]
¢þ
>WENV182559971
OJDR01000040
[OJDR] seawater metagenome; Sea water
4970
5046
+
Pro
TGG
[ENA]
¢þ
>WENV182560383
OJDU01000277
[OJDU] seawater metagenome; Sea water
3365
3289
-
Pro
TGG
[ENA]
¢þ
>WENV182561194
OJDV01012960
[OJDV] seawater metagenome; Sea water
286
362
+
Pro
TGG
[ENA]
¢þ
>WENV182561535
OJDW01003712
[OJDW] seawater metagenome; Sea water
745
669
-
Pro
TGG
[ENA]
¢þ
>WENV182565139
OJEG01007375
[OJEG] seawater metagenome; Sea water
52
128
+
Pro
TGG
[ENA]
¢þ
>WENV182565316
OJEH01002301
[OJEH] seawater metagenome; Sea water
2
78
+
Pro
TGG
[ENA]
¢þ
>WENV182565894
OJEI01000945
[OJEI] seawater metagenome; Sea water
94
170
+
Pro
TGG
[ENA]
¢þ
>WENV182566085
OJEJ01000029
[OJEJ] seawater metagenome; Sea water
95122
95046
-
Pro
TGG
[ENA]
¢þ
>WENV182567198
OJEN01012405
[OJEN] seawater metagenome; Sea water
957
1033
+
Pro
TGG
[ENA]
¢þ
>WENV182567418
OJEO01000670
[OJEO] seawater metagenome; Sea water
136
212
+
Pro
TGG
[ENA]
¢þ
>WENV182567681
OJEP01000057
[OJEP] seawater metagenome; Sea water
69709
69633
-
Pro
TGG
[ENA]
¢þ
>WENV182568170
OJEQ01004552
[OJEQ] seawater metagenome; Sea water
492
416
-
Pro
TGG
[ENA]
¢þ
>WENV182568280
OJET01000030
[OJET] seawater metagenome; Sea water
42847
42771
-
Pro
TGG
[ENA]
¢þ
>WENV182568283
OJET01000030
[OJET] seawater metagenome; Sea water
42409
42333
-
Pro
TGG
[ENA]
¢þ
>WENV182568705
OJEW01000765
[OJEW] seawater metagenome; Sea water
479
403
-
Pro
TGG
[ENA]
¢þ
>WENV182568815
OJEX01000020
[OJEX] seawater metagenome; Sea water
129461
129385
-
Pro
TGG
[ENA]
¢þ
>WENV182572403
OJFL01005895
[OJFL] seawater metagenome; Sea water
608
532
-
Pro
TGG
[ENA]
¢þ
>WENV182573269
OJFP01000551
[OJFP] seawater metagenome; Sea water
2030
1954
-
Pro
TGG
[ENA]
¢þ
>WENV182574820
OJFS01002449
[OJFS] seawater metagenome; Sea water
855
931
+
Pro
TGG
[ENA]
¢þ
>WENV182574823
OJFS01002449
[OJFS] seawater metagenome; Sea water
1309
1385
+
Pro
TGG
[ENA]
¢þ
>WENV182575157
OJFU01000304
[OJFU] seawater metagenome; Sea water
11598
11522
-
Pro
TGG
[ENA]
¢þ
>WENV182575218
OJFU01001061
[OJFU] seawater metagenome; Sea water
562
486
-
Pro
TGG
[ENA]
¢þ
>WENV182575505
OJFV01000011
[OJFV] seawater metagenome; Sea water
27305
27381
+
Pro
TGG
[ENA]
¢þ
>WENV182575507
OJFV01000011
[OJFV] seawater metagenome; Sea water
84126
84202
+
Pro
TGG
[ENA]
¢þ
>WENV182575520
OJFV01000025
[OJFV] seawater metagenome; Sea water
136457
136381
-
Pro
TGG
[ENA]
¢þ
>WENV182575521
OJFV01000025
[OJFV] seawater metagenome; Sea water
131897
131821
-
Pro
TGG
[ENA]
¢þ
>WENV182576250
OJFX01006580
[OJFX] seawater metagenome; Sea water
2932
2856
-
Pro
TGG
[ENA]
¢þ
>WENV182576970
OJGC01000061
[OJGC] seawater metagenome; Sea water
6350
6426
+
Pro
TGG
[ENA]
¢þ
>WENV182577687
OJGH01001044
[OJGH] seawater metagenome; Sea water
1147
1071
-
Pro
TGG
[ENA]
¢þ
>WENV182577819
OJGJ01001562
[OJGJ] seawater metagenome; Sea water
122
198
+
Pro
TGG
[ENA]
¢þ
>WENV182578794
OJGP01003394
[OJGP] seawater metagenome; Sea water
1096
1172
+
Pro
TGG
[ENA]
¢þ
>WENV182579746
OJGT01000254
[OJGT] seawater metagenome; Sea water
6411
6487
+
Pro
TGG
[ENA]
¢þ
>WENV182580239
OJGU01021507
[OJGU] seawater metagenome; Sea water
94
170
+
Pro
TGG
[ENA]
¢þ
>WENV182580869
OJGW01021733
[OJGW] seawater metagenome; Sea water
381
457
+
Pro
TGG
[ENA]
¢þ
>WENV182580872
OJGW01021733
[OJGW] seawater metagenome; Sea water
838
914
+
Pro
TGG
[ENA]
¢þ
>WENV182581436
OJGX01006602
[OJGX] seawater metagenome; Sea water
2
78
+
Pro
TGG
[ENA]
¢þ
>WENV182584366
OJHG01000058
[OJHG] seawater metagenome; Sea water
18834
18910
+
Pro
TGG
[ENA]
¢þ
>WENV182586411
OJHK01000256
[OJHK] seawater metagenome; Sea water
2082
2158
+
Pro
TGG
[ENA]
¢þ
>WENV182587436
OJHM01006682
[OJHM] seawater metagenome; Sea water
890
966
+
Pro
TGG
[ENA]
¢þ
>WENV182587991
OJHO01000599
[OJHO] seawater metagenome; Sea water
646
570
-
Pro
TGG
[ENA]
¢þ
>WENV182588239
OJHP01003288
[OJHP] seawater metagenome; Sea water
34
110
+
Pro
TGG
[ENA]
¢þ
>WENV182588242
OJHP01003288
[OJHP] seawater metagenome; Sea water
383
459
+
Pro
TGG
[ENA]
¢þ
>WENV182588299
OJHR01000756
[OJHR] seawater metagenome; Sea water
280
204
-
Pro
TGG
[ENA]
¢þ
>WENV182588795
OJHY01000032
[OJHY] seawater metagenome; Sea water
7173
7249
+
Pro
TGG
[ENA]
¢þ
>WENV182590623
OJIJ01000578
[OJIJ] seawater metagenome; Sea water
872
948
+
Pro
TGG
[ENA]
¢þ
>WENV182591620
OJIO01000865
[OJIO] seawater metagenome; Sea water
1177
1253
+
Pro
TGG
[ENA]
¢þ
>WENV182594015
OJIV01000058
[OJIV] seawater metagenome; Sea water
6923
6999
+
Pro
TGG
[ENA]
¢þ
>WENV183053753
OLGQ01002940
[OLGQ] seawater metagenome; Sea water
417
341
-
Pro
TGG
[ENA]
¢þ
>WENV183055429
OLHB01005552
[OLHB] seawater metagenome; Sea water
237
313
+
Pro
TGG
[ENA]
¢þ
>WENV183055480
OLHD01000004
[OLHD] seawater metagenome; Sea water
53311
53387
+
Pro
TGG
[ENA]
¢þ
>WENV183055488
OLHD01000021
[OLHD] seawater metagenome; Sea water
38543
38467
-
Pro
TGG
[ENA]
¢þ
>WENV183055491
OLHD01000021
[OLHD] seawater metagenome; Sea water
38105
38029
-
Pro
TGG
[ENA]
¢þ
>WENV183055673
OLHF01000027
[OLHF] seawater metagenome; Sea water
52448
52524
+
Pro
TGG
[ENA]
¢þ
>WENV183055685
OLHF01000055
[OLHF] seawater metagenome; Sea water
33638
33562
-
Pro
TGG
[ENA]
¢þ
>WENV183056307
OLHI01005851
[OLHI] seawater metagenome; Sea water
753
677
-
Pro
TGG
[ENA]
¢þ
>WENV183057157
OLHK01006358
[OLHK] seawater metagenome; Sea water
166
90
-
Pro
TGG
[ENA]
¢þ
>WENV183057788
OLHM01004902
[OLHM] seawater metagenome; Sea water
1020
1096
+
Pro
TGG
[ENA]
¢þ
>WENV183058094
OLHN01003586
[OLHN] seawater metagenome; Sea water
1980
1904
-
Pro
TGG
[ENA]
¢þ
>WENV183058291
OLHP01002261
[OLHP] seawater metagenome; Sea water
254
330
+
Pro
TGG
[ENA]
¢þ
>WENV183058293
OLHP01002261
[OLHP] seawater metagenome; Sea water
1512
1436
-
Pro
TGG
[ENA]
¢þ
>WENV183058373
OLHQ01002184
[OLHQ] seawater metagenome; Sea water
294
370
+
Pro
TGG
[ENA]
¢þ
>WENV183058375
OLHQ01002184
[OLHQ] seawater metagenome; Sea water
1552
1476
-
Pro
TGG
[ENA]
¢þ
>WENV183059760
OLHV01002478
[OLHV] seawater metagenome; Sea water
2559
2635
+
Pro
TGG
[ENA]
¢þ
>WENV183064756
OLII01000357
[OLII] seawater metagenome; Sea water
15162
15238
+
Pro
TGG
[ENA]
¢þ
>WENV183064800
OLII01000733
[OLII] seawater metagenome; Sea water
2428
2504
+
Pro
TGG
[ENA]
¢þ
>WENV183065032
OLII01012501
[OLII] seawater metagenome; Sea water
621
545
-
Pro
TGG
[ENA]
¢þ
>WENV183522194
OMOM01000648
[OMOM] seawater metagenome; Sea water
7130
7054
-
Pro
TGG
[ENA]
¢þ
>WENV170704257
LLEJ01000677
[LLEJ] bioreactor metagenome; day101 10degC chemostat 2011 inoculated with Wadden Sea sediment taken from the upper 2 cm of the
1782
1858
+
Pro
TGG
[ENA]
¢þ
>WENV170704307
LLEJ01002622
[LLEJ] bioreactor metagenome; day101 10degC chemostat 2011 inoculated with Wadden Sea sediment taken from the upper 2 cm of the
116
40
-
Pro
TGG
[ENA]
¢þ
>WENV170704708
LLEM01000316
[LLEM] bioreactor metagenome; day64 10degC chemostat 2012 inoculated with Wadden Sea sediment taken from the upper 2 cm of the
1564
1488
-
Pro
TGG
[ENA]
¢þ
>WENV170704710
LLEM01000316
[LLEM] bioreactor metagenome; day64 10degC chemostat 2012 inoculated with Wadden Sea sediment taken from the upper 2 cm of the
1187
1111
-
Pro
TGG
[ENA]
¢þ
>WENV170780340
MAAA01029165
[MAAA] seawater metagenome; sample BD02T6 sea water enriched with oil for 6 days
575
651
+
Pro
TGG
[ENA]
¢þ
>WENV170780445
MAAB01001252
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
13985
14061
+
Pro
TGG
[ENA]
¢þ
>WENV170780448
MAAB01001252
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
14330
14406
+
Pro
TGG
[ENA]
¢þ
>WENV170780467
MAAB01001408
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
1530
1454
-
Pro
TGG
[ENA]
¢þ
>WENV170780543
MAAB01004882
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
1823
1747
-
Pro
TGG
[ENA]
¢þ
>WENV170780654
MAAB01010733
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
621
545
-
Pro
TGG
[ENA]
¢þ
>WENV170780685
MAAB01013729
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
3644
3568
-
Pro
TGG
[ENA]
¢þ
>WENV170780701
MAAB01015245
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
76
152
+
Pro
TGG
[ENA]
¢þ
>WENV170780704
MAAB01015245
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
629
705
+
Pro
TGG
[ENA]
¢þ
>WENV170780960
MAAB01028896
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
65916
65840
-
Pro
TGG
[ENA]
¢þ
>WENV170780963
MAAB01028896
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
65272
65196
-
Pro
TGG
[ENA]
¢þ
>WENV170780999
MAAB01028972
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
82
6
-
Pro
TGG
[ENA]
¢þ
>WENV170781072
MAAB01029286
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
14055
14131
+
Pro
TGG
[ENA]
¢þ
>WENV170781075
MAAB01029286
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
14681
14757
+
Pro
TGG
[ENA]
¢þ
>WENV170781078
MAAB01029352
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
41301
41225
-
Pro
TGG
[ENA]
¢þ
>WENV170781083
MAAB01029362
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
101226
101302
+
Pro
TGG
[ENA]
¢þ
>WENV170781086
MAAB01029362
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
101571
101647
+
Pro
TGG
[ENA]
¢þ
>WENV170781190
MAAB01029650
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
1620
1696
+
Pro
TGG
[ENA]
¢þ
>WENV170781229
MAAB01029738
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
2426
2502
+
Pro
TGG
[ENA]
¢þ
>WENV170781261
MAAB01030446
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
317
241
-
Pro
TGG
[ENA]
¢þ
>WENV170781270
MAAB01030488
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
207
131
-
Pro
TGG
[ENA]
¢þ
>WENV170781280
MAAB01030802
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
874
798
-
Pro
TGG
[ENA]
¢þ
>WENV170781283
MAAB01030802
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
517
441
-
Pro
TGG
[ENA]
¢þ
>WENV170781294
MAAB01031334
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
1575
1499
-
Pro
TGG
[ENA]
¢þ
>WENV170781649
MAAB01040512
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
22113
22037
-
Pro
TGG
[ENA]
¢þ
>WENV170781805
MAAC01000713
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
14351
14275
-
Pro
TGG
[ENA]
¢þ
>WENV170781807
MAAC01000713
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
135
59
-
Pro
TGG
[ENA]
¢þ
>WENV170782441
MAAC01009941
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
117435
117359
-
Pro
TGG
[ENA]
¢þ
>WENV170782442
MAAC01009941
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
110729
110653
-
Pro
TGG
[ENA]
¢þ
>WENV170782455
MAAC01010005
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
7112
7036
-
Pro
TGG
[ENA]
¢þ
>WENV170782457
MAAC01010053
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
7932
7856
-
Pro
TGG
[ENA]
¢þ
>WENV170782530
MAAC01010180
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
56794
56718
-
Pro
TGG
[ENA]
¢þ
>WENV170782533
MAAC01010180
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
56437
56361
-
Pro
TGG
[ENA]
¢þ
>WENV170782921
MAAC01012086
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
62516
62440
-
Pro
TGG
[ENA]
¢þ
>WENV170783128
MAAC01013903
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
5391
5315
-
Pro
TGG
[ENA]
¢þ
>WENV170783153
MAAC01014475
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
4311
4387
+
Pro
TGG
[ENA]
¢þ
>WENV170783156
MAAC01014475
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
4656
4732
+
Pro
TGG
[ENA]
¢þ
>WENV170783174
MAAC01014698
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
34878
34802
-
Pro
TGG
[ENA]
¢þ
>WENV170783177
MAAC01014698
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
25846
25770
-
Pro
TGG
[ENA]
¢þ
>WENV170783190
MAAC01014797
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
405
481
+
Pro
TGG
[ENA]
¢þ
>WENV170783193
MAAC01014797
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
1031
1107
+
Pro
TGG
[ENA]
¢þ
>WENV170783211
MAAC01014870
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
323
247
-
Pro
TGG
[ENA]
¢þ
>WENV170783221
MAAC01015069
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
6958
6882
-
Pro
TGG
[ENA]
¢þ
>WENV170783644
MAAC01018307
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
72382
72306
-
Pro
TGG
[ENA]
¢þ
>WENV170783647
MAAC01018307
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
71980
71904
-
Pro
TGG
[ENA]
¢þ
>C181136203
CP026604
Gammaproteobacteria
Saccharobesus litoralis CCB-QB4 [CP026604]
5046081
5046005
-
Pro
TGG
-
¡û
>C181136206
CP026604
Gammaproteobacteria
Saccharobesus litoralis CCB-QB4 [CP026604]
5045783
5045707
-
Pro
TGG
-
¡û
>C181169917
CP028924
Gammaproteobacteria
Colwellia sp. Arc7-D [CP028924]
1058818
1058894
+
Pro
TGG
-
¡û
>C181169920
CP028924
Gammaproteobacteria
Colwellia sp. Arc7-D [CP028924]
1059358
1059434
+
Pro
TGG
-
¡û
>C191128326
CP034660
Gammaproteobacteria
Colwellia sp. Arc7-635 [CP034660]
1079519
1079595
+
Pro
TGG
-
¡û
>C191128329
CP034660
Gammaproteobacteria
Colwellia sp. Arc7-635 [CP034660]
1079958
1080034
+
Pro
TGG
-
¡û
>C191129097
CP034683
Gammaproteobacteria
Rheinheimera mangrovi LHK132 [CP034683]
3009174
3009098
-
Pro
TGG
-
¡û
>C191129100
CP034683
Gammaproteobacteria
Rheinheimera mangrovi LHK132 [CP034683]
3008861
3008785
-
Pro
TGG
-
¡û
>C191130463
CP034759
Gammaproteobacteria
Litorilituus sediminis JCM 17549 [CP034759]
3974703
3974779
+
Pro
TGG
-
¡û
>C191130466
CP034759
Gammaproteobacteria
Litorilituus sediminis JCM 17549 [CP034759]
3975054
3975130
+
Pro
TGG
-
¡û
>C191160553
CP038493
Gammaproteobacteria
Thalassotalea sp. HSM 43 [CP038493]
2933792
2933868
+
Pro
TGG
-
¡û
>C191160556
CP038493
Gammaproteobacteria
Thalassotalea sp. HSM 43 [CP038493]
2934112
2934188
+
Pro
TGG
-
¡û
>W141779413
JONU01000011
Gammaproteobacteria
Rheinheimera texasensis DSM 17496 [JONU]
194817
194893
+
Pro
TGG
[ENA]
¡û
>W141779416
JONU01000011
Gammaproteobacteria
Rheinheimera texasensis DSM 17496 [JONU]
195145
195221
+
Pro
TGG
[ENA]
¡û
>W1911770221
QXIO01000007
Gammaproteobacteria
Colwellia sp. RSH04 [QXIO]
109777
109853
+
Pro
TGG
[ENA]
¡û
>W1911770224
QXIO01000007
Gammaproteobacteria
Colwellia sp. RSH04 [QXIO]
110126
110202
+
Pro
TGG
[ENA]
¡û
>W1810155083
PJAI01000022
Gammaproteobacteria
Colwellia echini A3T [PJAI]
152062
151986
-
Pro
TGG
[ENA]
¡û
>W1810155128
PJAI01000122
Gammaproteobacteria
Colwellia echini A3T [PJAI]
370816
370740
-
Pro
TGG
[ENA]
¡û
>W1810155131
PJAI01000122
Gammaproteobacteria
Colwellia echini A3T [PJAI]
370460
370384
-
Pro
TGG
[ENA]
¡û
>W1810155351
PJAQ01000017
Gammaproteobacteria
Colwellia sp. 12G3 [PJAQ]
544381
544305
-
Pro
TGG
[ENA]
¡û
>W1810155354
PJAQ01000017
Gammaproteobacteria
Colwellia sp. 12G3 [PJAQ]
544045
543969
-
Pro
TGG
[ENA]
¡û
>W1810155390
PJAQ01000068
Gammaproteobacteria
Colwellia sp. 12G3 [PJAQ]
855264
855340
+
Pro
TGG
[ENA]
¡û
>W1810155546
PJAU01000032
Gammaproteobacteria
Colwellia sp. 75C3 [PJAU]
486144
486068
-
Pro
TGG
[ENA]
¡û
>W1810155549
PJAU01000032
Gammaproteobacteria
Colwellia sp. 75C3 [PJAU]
485717
485641
-
Pro
TGG
[ENA]
¡û
>W1810155553
PJAU01000033
Gammaproteobacteria
Colwellia sp. 75C3 [PJAU]
401115
401039
-
Pro
TGG
[ENA]
¡û
>W1810155554
PJAU01000033
Gammaproteobacteria
Colwellia sp. 75C3 [PJAU]
394170
394094
-
Pro
TGG
[ENA]
¡û
>W1810155980
PJBA01000006
Gammaproteobacteria
Colwellia sp. Bg11-28 [PJBA]
125151
125227
+
Pro
TGG
[ENA]
¡û
>W1810155983
PJBA01000006
Gammaproteobacteria
Colwellia sp. Bg11-28 [PJBA]
125506
125582
+
Pro
TGG
[ENA]
¡û
>W1810156038
PJBA01000018
Gammaproteobacteria
Colwellia sp. Bg11-28 [PJBA]
938303
938379
+
Pro
TGG
[ENA]
¡û
>W1810701323
QMED01000001
Gammaproteobacteria
Algibacillus agarilyticus RQJ05 [QMED]
321674
321598
-
Pro
TGG
[ENA]
¡û
>W1810701326
QMED01000001
Gammaproteobacteria
Algibacillus agarilyticus RQJ05 [QMED]
321366
321290
-
Pro
TGG
[ENA]
¡û
>W1810735901
QOLD01000069
Gammaproteobacteria
Candidatus Colwellia aromaticivorans Bin11-node4 [QOLD]
24180
24256
+
Pro
TGG
[ENA]
¡û
>W1810735904
QOLD01000069
Gammaproteobacteria
Candidatus Colwellia aromaticivorans Bin11-node4 [QOLD]
24710
24786
+
Pro
TGG
[ENA]
¡û
>WENV029101
AACY021170924
Marine microbial communities from Global Ocean Sampling (GOS)
504
582
+
Pro
TGG
[ENA]
>W1511322686
JQDZ01000009
Gammaproteobacteria
Thalassotalea sp. ND16A [JQDZ]
54856
54780
-
Pro
TGG
[ENA]
¡û
>W1511322689
JQDZ01000009
Gammaproteobacteria
Thalassotalea sp. ND16A [JQDZ]
54432
54356
-
Pro
TGG
[ENA]
¡û
>W1511322864
JQEC01000011
Gammaproteobacteria
Colwellia psychrerythraea GAB14E [JQEC]
359126
359050
-
Pro
TGG
[ENA]
¡û
>W1511322867
JQEC01000011
Gammaproteobacteria
Colwellia psychrerythraea GAB14E [JQEC]
358767
358691
-
Pro
TGG
[ENA]
¡û
>W1511322895
JQEC01000040
Gammaproteobacteria
Colwellia psychrerythraea GAB14E [JQEC]
71344
71420
+
Pro
TGG
[ENA]
¡û
>W1511322937
JQED01000005
Gammaproteobacteria
Colwellia psychrerythraea ND2E [JQED]
172787
172863
+
Pro
TGG
[ENA]
¡û
>W1511322959
JQED01000015
Gammaproteobacteria
Colwellia psychrerythraea ND2E [JQED]
314662
314586
-
Pro
TGG
[ENA]
¡û
>W1511322962
JQED01000015
Gammaproteobacteria
Colwellia psychrerythraea ND2E [JQED]
314314
314238
-
Pro
TGG
[ENA]
¡û
>W1511533739
JYNI01000019
Gammaproteobacteria
Thalassomonas actiniarum A5K-106 [JYNI]
169904
169980
+
Pro
TGG
[ENA]
¡û
>W1511533742
JYNI01000019
Gammaproteobacteria
Thalassomonas actiniarum A5K-106 [JYNI]
170246
170322
+
Pro
TGG
[ENA]
¡û
>W1511533743
JYNI01000019
Gammaproteobacteria
Thalassomonas actiniarum A5K-106 [JYNI]
170362
170438
+
Pro
TGG
[ENA]
¡û
>W1511533744
JYNI01000019
Gammaproteobacteria
Thalassomonas actiniarum A5K-106 [JYNI]
170478
170554
+
Pro
TGG
[ENA]
¡û
>W1511573473
LAMX01000012
Gammaproteobacteria
Rheinheimera sp. KL1 [LAMX]
218356
218280
-
Pro
TGG
[ENA]
¡û
>W1511584716
LAVS01000086
Gammaproteobacteria
Rheinheimera mesophila IITR-13 [LAVS]
58627
58703
+
Pro
TGG
[ENA]
¡û
>W1511584719
LAVS01000086
Gammaproteobacteria
Rheinheimera mesophila IITR-13 [LAVS]
58935
59011
+
Pro
TGG
[ENA]
¡û
>W1511586707
LAZL01000009
Gammaproteobacteria
Catenovulum maritimum Q1 [LAZL]
34161
34085
-
Pro
TGG
[ENA]
¡û
>W1511586710
LAZL01000009
Gammaproteobacteria
Catenovulum maritimum Q1 [LAZL]
33852
33776
-
Pro
TGG
[ENA]
¡û
>W11162876
AFHI01000021
Gammaproteobacteria
Rheinheimera sp. A13L [AFHI]
24969
24893
-
Pro
TGG
[ENA]
¡û
>W11162879
AFHI01000021
Gammaproteobacteria
Rheinheimera sp. A13L [AFHI]
24664
24588
-
Pro
TGG
[ENA]
¡û
>C161052268
CP013145
Gammaproteobacteria
Colwellia sp. MT41 [CP013145]
3085049
3084973
-
Pro
TGG
[Ensembl]
¡û
>C161052271
CP013145
Gammaproteobacteria
Colwellia sp. MT41 [CP013145]
3084693
3084617
-
Pro
TGG
[Ensembl]
¡û
>C161052272
CP013145
Gammaproteobacteria
Colwellia sp. MT41 [CP013145]
3084502
3084426
-
Pro
TGG
[Ensembl]
¡û
>C161058551
CP013656
Gammaproteobacteria
Rheinheimera sp. F8 [CP013656]
189663
189587
-
Pro
TGG
-
¡û
>C161058554
CP013656
Gammaproteobacteria
Rheinheimera sp. F8 [CP013656]
189333
189257
-
Pro
TGG
-
¡û
>W121070150
AJWM01000019
Gammaproteobacteria
Catenovulum agarivorans YM01 [AJWM]
26926
26850
-
Pro
TGG
[ENA]
¡û
>W121070153
AJWM01000019
Gammaproteobacteria
Catenovulum agarivorans YM01 [AJWM]
26620
26544
-
Pro
TGG
[ENA]
¡û
>W1610663891
LJVG01000040
Gammaproteobacteria
Colwellia sp. MT2012 [LJVG]
37605
37529
-
Pro
TGG
[ENA]
¡û
>W1610663894
LJVG01000040
Gammaproteobacteria
Colwellia sp. MT2012 [LJVG]
37250
37174
-
Pro
TGG
[ENA]
¡û
>W1610663895
LJVG01000040
Gammaproteobacteria
Colwellia sp. MT2012 [LJVG]
37059
36983
-
Pro
TGG
[ENA]
¡û
>W1610667845
LJYX01000017
Gammaproteobacteria
Colwellia sp. TT2012 [LJYX]
719279
719203
-
Pro
TGG
[ENA]
¡û
>W1610667848
LJYX01000017
Gammaproteobacteria
Colwellia sp. TT2012 [LJYX]
718923
718847
-
Pro
TGG
[ENA]
¡û
>W1610667849
LJYX01000017
Gammaproteobacteria
Colwellia sp. TT2012 [LJYX]
718732
718656
-
Pro
TGG
[ENA]
¡û
>W1610667873
LJYX01000021
Gammaproteobacteria
Colwellia sp. TT2012 [LJYX]
512019
512095
+
Pro
TGG
[ENA]
¡û
>W1610896164
LRUI01000012
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [LRUI]
77837
77913
+
Pro
TGG
[ENA]
¡û
>W1610896167
LRUI01000012
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [LRUI]
81416
81492
+
Pro
TGG
[ENA]
¡û
>W1610917281
LSMS01000102
Gammaproteobacteria
Colwellia sp. Phe_37 [LSMS]
3009
3085
+
Pro
TGG
[ENA]
¡û
>W1610917284
LSMS01000102
Gammaproteobacteria
Colwellia sp. Phe_37 [LSMS]
3488
3564
+
Pro
TGG
[ENA]
¡û
>W1611012187
LXWK01000015
Gammaproteobacteria
Rheinheimera sp. SA_1 [LXWK]
812142
812066
-
Pro
TGG
[ENA]
¡û
>W1611012190
LXWK01000015
Gammaproteobacteria
Rheinheimera sp. SA_1 [LXWK]
811776
811700
-
Pro
TGG
[ENA]
¡û
>W1710087351
BDQM01000015
Gammaproteobacteria
Colwellia marinimaniae [BDQM]
90028
90103
+
Pro
TGG
[ENA]
¡û
>W1710087370
BDQM01000040
Gammaproteobacteria
Colwellia marinimaniae [BDQM]
188
264
+
Pro
TGG
[ENA]
¡û
>W1710087371
BDQM01000040
Gammaproteobacteria
Colwellia marinimaniae [BDQM]
379
455
+
Pro
TGG
[ENA]
¡û
>W1710087390
BDQM01000137
Gammaproteobacteria
Colwellia marinimaniae [BDQM]
352
427
+
Pro
TGG
[ENA]
¡û
>W1710545228
FOBI01000001
Gammaproteobacteria
Colwellia chukchiensis [FOBI]
295139
295063
-
Pro
TGG
[ENA]
¡û
>W1710545231
FOBI01000001
Gammaproteobacteria
Colwellia chukchiensis [FOBI]
294728
294652
-
Pro
TGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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