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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.15488 (266 seq.)
>W1710821469
LKTL01000006
Gammaproteobacteria
Shewanella sp. P1-14-1 [LKTL]
209137
209225
+
Ser
GCT
[ENA]
¡û
>W1711934401
NAJR01000003
Gammaproteobacteria
Shewanella sp. Shew256 [NAJR]
25236
25145
-
Ser
GCT
[ENA]
¡û
>W1711934405
NAJR01000003
Gammaproteobacteria
Shewanella sp. Shew256 [NAJR]
24749
24658
-
Ser
GCT
[ENA]
¡û
>C171108608
CP020472
Gammaproteobacteria
Shewanella japonica KCTC 22435 [CP020472]
3661493
3661402
-
Ser
GCT
-
¡û
>C171108612
CP020472
Gammaproteobacteria
Shewanella japonica KCTC 22435 [CP020472]
3661078
3660987
-
Ser
GCT
-
¡û
>C019777
CP000507
Gammaproteobacteria
Shewanella amazonensis SB2B [CP000507]
1271639
1271730
+
Ser
GCT
[Ensembl]
¡û
>C019783
CP000507
Gammaproteobacteria
Shewanella amazonensis SB2B [CP000507]
1272281
1272372
+
Ser
GCT
[Ensembl]
¡û
>C022328
CP000446
Gammaproteobacteria
Shewanella sp. MR-4 [CP000446]
1327447
1327538
+
Ser
GCT
[Ensembl]
¡û
>C022334
CP000446
Gammaproteobacteria
Shewanella sp. MR-4 [CP000446]
1328179
1328270
+
Ser
GCT
[Ensembl]
¡û
>C022661
CP000606
Gammaproteobacteria
Shewanella loihica PV-4 [CP000606]
1416121
1416212
+
Ser
GCT
[Ensembl]
¡û
>C022666
CP000606
Gammaproteobacteria
Shewanella loihica PV-4 [CP000606]
1416665
1416756
+
Ser
GCT
[Ensembl]
¡û
>WENV180311268
OBJT01191778
[OBJT] soil metagenome; soil
241
150
-
Ser
GCT
[ENA]
¡û
>WENV181233481
OFES01173600
[OFES] coral metagenome; NA
359
268
-
Ser
GCT
[ENA]
¡û
>W141227971
BALO01000022
Gammaproteobacteria
Shewanella algae JCM 21037 [BALO]
82508
82417
-
Ser
GCT
[ENA]
¡û
>W141227975
BALO01000040
Gammaproteobacteria
Shewanella algae JCM 21037 [BALO]
40253
40344
+
Ser
GCT
[ENA]
¡û
>WENV170023600
BCQL01000212
[BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa
9751
9660
-
Ser
GCT
[ENA]
¡û
>WENV170702823
LKMJ01004244
[LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake
4474
4565
+
Ser
GCT
[ENA]
¡û
>WENV170811362
MDSW01165338
[MDSW] marine metagenome; seawater
646
555
-
Ser
GCT
[ENA]
¡û
>C181062994
CP022358
Gammaproteobacteria
Shewanella bicestrii JAB-1 [CP022358]
3436665
3436574
-
Ser
GCT
-
¡û
>C181063000
CP022358
Gammaproteobacteria
Shewanella bicestrii JAB-1 [CP022358]
3435936
3435845
-
Ser
GCT
-
¡û
>W141520100
JGVI01000072
Gammaproteobacteria
Shewanella xiamenensis [JGVI]
54450
54359
-
Ser
GCT
[ENA]
¡û
>W141520106
JGVI01000072
Gammaproteobacteria
Shewanella xiamenensis [JGVI]
53719
53628
-
Ser
GCT
[ENA]
¡û
>W09104025
AALH01000011
Gammaproteobacteria
Shewanella sp. ANA-3 [AALH]
115673
115764
+
Ser
GCT
[ENA]
¡û
>W09104031
AALH01000011
Gammaproteobacteria
Shewanella sp. ANA-3 [AALH]
116401
116492
+
Ser
GCT
[ENA]
¡û
>W09104615
AALX01000056
Gammaproteobacteria
Shewanella sp. MR-4 [AALX]
20373
20282
-
Ser
GCT
[ENA]
¡û
>W141801960
JPEO01000003
Gammaproteobacteria
Shewanella mangrovi YQH10 [JPEO]
363727
363636
-
Ser
GCT
[ENA]
¡û
>W141801965
JPEO01000003
Gammaproteobacteria
Shewanella mangrovi YQH10 [JPEO]
363217
363126
-
Ser
GCT
[ENA]
¡û
>W1910644982
LVCY01000002
Gammaproteobacteria
Shewanella algae ACCC [LVCY]
205830
205739
-
Ser
GCT
[ENA]
¡û
>W1910644988
LVCY01000002
Gammaproteobacteria
Shewanella algae ACCC [LVCY]
205194
205103
-
Ser
GCT
[ENA]
¡û
>W1910645105
LVDH01000003
Gammaproteobacteria
Shewanella algae AC [LVDH]
66460
66551
+
Ser
GCT
[ENA]
¡û
>W1910645111
LVDH01000003
Gammaproteobacteria
Shewanella algae AC [LVDH]
67096
67187
+
Ser
GCT
[ENA]
¡û
>W1910645303
LVDU01000016
Gammaproteobacteria
Shewanella algae YHL [LVDU]
1255
1164
-
Ser
GCT
[ENA]
¡û
>W1910645309
LVDU01000016
Gammaproteobacteria
Shewanella algae YHL [LVDU]
619
528
-
Ser
GCT
[ENA]
¡û
>W1910676772
MCTV01000068
Gammaproteobacteria
Shewanella sp. 10N.286.52.C2 [MCTV]
153053
153144
+
Ser
GCT
[ENA]
¡û
>W1910676777
MCTV01000068
Gammaproteobacteria
Shewanella sp. 10N.286.52.C2 [MCTV]
153566
153657
+
Ser
GCT
[ENA]
¡û
>W1910676933
MCTY01000136
Gammaproteobacteria
Shewanella sp. 10N.286.52.B9 [MCTY]
39394
39303
-
Ser
GCT
[ENA]
¡û
>W1910676938
MCTY01000136
Gammaproteobacteria
Shewanella sp. 10N.286.52.B9 [MCTY]
38881
38790
-
Ser
GCT
[ENA]
¡û
>W1910679668
MCVI01000021
Gammaproteobacteria
Shewanella sp. 10N.286.48.A6 [MCVI]
57474
57383
-
Ser
GCT
[ENA]
¡û
>W1910679673
MCVI01000021
Gammaproteobacteria
Shewanella sp. 10N.286.48.A6 [MCVI]
56961
56870
-
Ser
GCT
[ENA]
¡û
>W1910905498
NGVS01000004
Gammaproteobacteria
Shewanella sp. 08MAS2251 [NGVS]
25826
25735
-
Ser
GCT
[ENA]
¡û
>W1910905505
NGVS01000004
Gammaproteobacteria
Shewanella sp. 08MAS2251 [NGVS]
25083
24992
-
Ser
GCT
[ENA]
¡û
>W1910905507
NGVS01000004
Gammaproteobacteria
Shewanella sp. 08MAS2251 [NGVS]
24860
24769
-
Ser
GCT
[ENA]
¡û
>W1910905509
NGVS01000004
Gammaproteobacteria
Shewanella sp. 08MAS2251 [NGVS]
24637
24546
-
Ser
GCT
[ENA]
¡û
>W1910905511
NGVS01000004
Gammaproteobacteria
Shewanella sp. 08MAS2251 [NGVS]
24414
24323
-
Ser
GCT
[ENA]
¡û
>W1910913794
NHRI01000016
Gammaproteobacteria
Shewanella sp. BC20 [NHRI]
7525
7434
-
Ser
GCT
[ENA]
¡û
>W1910913800
NHRI01000016
Gammaproteobacteria
Shewanella sp. BC20 [NHRI]
6798
6707
-
Ser
GCT
[ENA]
¡û
>W1910927050
NIJK01000022
Gammaproteobacteria
Shewanella indica KJW27 [NIJK]
388
297
-
Ser
GCT
[ENA]
¡û
>W1910927088
NIJK01000039
Gammaproteobacteria
Shewanella indica KJW27 [NIJK]
89
180
+
Ser
GCT
[ENA]
¡û
>W1910927212
NIJL01000040
Gammaproteobacteria
Shewanella upenei 20-23R [NIJL]
83395
83304
-
Ser
GCT
[ENA]
¡û
>W1910927218
NIJL01000040
Gammaproteobacteria
Shewanella upenei 20-23R [NIJL]
82759
82668
-
Ser
GCT
[ENA]
¡û
>W1911710108
QPQU01000005
Gammaproteobacteria
Shewanella pacifica KCTC 12235 [QPQU]
263655
263746
+
Ser
GCT
[ENA]
¡û
>W1911710112
QPQU01000005
Gammaproteobacteria
Shewanella pacifica KCTC 12235 [QPQU]
264070
264161
+
Ser
GCT
[ENA]
¡û
>W1810585868
QFDC01000017
Gammaproteobacteria
Shewanella algae Sh392 [QFDC]
30874
30965
+
Ser
GCT
[ENA]
¡û
>W1810585874
QFDC01000017
Gammaproteobacteria
Shewanella algae Sh392 [QFDC]
31510
31601
+
Ser
GCT
[ENA]
¡û
>W1810587752
QFLG01000029
Gammaproteobacteria
Shewanella xiamenensis DCB2-1 [QFLG]
72422
72513
+
Ser
GCT
[ENA]
¡û
>W1810587783
QFLG01000081
Gammaproteobacteria
Shewanella xiamenensis DCB2-1 [QFLG]
805
714
-
Ser
GCT
[ENA]
¡û
>W1810671693
QJSY01000032
Gammaproteobacteria
Shewanella chilikensis JC5 [QJSY]
29630
29539
-
Ser
GCT
[ENA]
¡û
>W1810671699
QJSY01000032
Gammaproteobacteria
Shewanella chilikensis JC5 [QJSY]
28995
28904
-
Ser
GCT
[ENA]
¡û
>W2010141011
BLRF01000075
Gammaproteobacteria
Shewanella xiamenensis SxND_W5_2018 [BLRF]
170
79
-
Ser
GCT
[ENA]
¡û
>W2010141045
BLRG01000038
Gammaproteobacteria
Shewanella xiamenensis SxND_W9_2018 [BLRG]
87480
87571
+
Ser
GCT
[ENA]
¡û
>W2010454280
JAAEJW010000030
Gammaproteobacteria
Shewanella sp. SE1 [JAAEJW]
86
177
+
Ser
GCT
[ENA]
¡û
>W2010454286
JAAEJW010000036
Gammaproteobacteria
Shewanella sp. SE1 [JAAEJW]
27732
27823
+
Ser
GCT
[ENA]
¡û
>W2010473898
JAAIKQ010000001
Gammaproteobacteria
Shewanella sp. WXL01 [JAAIKQ]
974999
975090
+
Ser
GCT
[ENA]
¡û
>W2010473902
JAAIKQ010000001
Gammaproteobacteria
Shewanella sp. WXL01 [JAAIKQ]
975425
975516
+
Ser
GCT
[ENA]
¡û
>W2010634286
JABUGE010000001
Gammaproteobacteria
Shewanella sp. ZOR0012 [JABUGE]
962217
962308
+
Ser
GCT
[ENA]
¡û
>W2010634292
JABUGE010000001
Gammaproteobacteria
Shewanella sp. ZOR0012 [JABUGE]
962948
963039
+
Ser
GCT
[ENA]
¡û
>W2010786025
LTBI01000015
Gammaproteobacteria
Shewanella algae CLS1 [LTBI]
22492
22401
-
Ser
GCT
[ENA]
¡û
>W2010786031
LTBI01000015
Gammaproteobacteria
Shewanella algae CLS1 [LTBI]
21856
21765
-
Ser
GCT
[ENA]
¡û
>W2010787275
LUKM01000002
Gammaproteobacteria
Shewanella algae JFC2 [LUKM]
149816
149725
-
Ser
GCT
[ENA]
¡û
>W2010787281
LUKM01000002
Gammaproteobacteria
Shewanella algae JFC2 [LUKM]
149180
149089
-
Ser
GCT
[ENA]
¡û
>W2010789019
LVCX01000017
Gammaproteobacteria
Shewanella algae JFC3 [LVCX]
89563
89654
+
Ser
GCT
[ENA]
¡û
>W2010789025
LVCX01000017
Gammaproteobacteria
Shewanella algae JFC3 [LVCX]
90199
90290
+
Ser
GCT
[ENA]
¡û
>W2010789059
LVCY01000002
Gammaproteobacteria
Shewanella algae ACCC [LVCY]
205830
205739
-
Ser
GCT
[ENA]
¡û
>W2010789065
LVCY01000002
Gammaproteobacteria
Shewanella algae ACCC [LVCY]
205194
205103
-
Ser
GCT
[ENA]
¡û
>W2010789211
LVCZ01000033
Gammaproteobacteria
Shewanella algae RC [LVCZ]
1855
1764
-
Ser
GCT
[ENA]
¡û
>W2010789217
LVCZ01000033
Gammaproteobacteria
Shewanella algae RC [LVCZ]
1219
1128
-
Ser
GCT
[ENA]
¡û
>W2010789439
LVDC01000019
Gammaproteobacteria
Shewanella algae SYC [LVDC]
82981
82890
-
Ser
GCT
[ENA]
¡û
>W2010789445
LVDC01000019
Gammaproteobacteria
Shewanella algae SYC [LVDC]
82345
82254
-
Ser
GCT
[ENA]
¡û
>W2010789506
LVDD01000003
Gammaproteobacteria
Shewanella algae CLS4 [LVDD]
293859
293768
-
Ser
GCT
[ENA]
¡û
>W2010789512
LVDD01000003
Gammaproteobacteria
Shewanella algae CLS4 [LVDD]
293223
293132
-
Ser
GCT
[ENA]
¡û
>W2010789586
LVDE01000003
Gammaproteobacteria
Shewanella algae CLS5 [LVDE]
63502
63593
+
Ser
GCT
[ENA]
¡û
>W2010789592
LVDE01000003
Gammaproteobacteria
Shewanella algae CLS5 [LVDE]
64138
64229
+
Ser
GCT
[ENA]
¡û
>W2010789776
LVDG01000013
Gammaproteobacteria
Shewanella algae melkephyllucas [LVDG]
92927
92836
-
Ser
GCT
[ENA]
¡û
>W2010789782
LVDG01000013
Gammaproteobacteria
Shewanella algae melkephyllucas [LVDG]
92291
92200
-
Ser
GCT
[ENA]
¡û
>W2010789947
LVDI01000009
Gammaproteobacteria
Shewanella algae JFL [LVDI]
94572
94663
+
Ser
GCT
[ENA]
¡û
>W2010789953
LVDI01000009
Gammaproteobacteria
Shewanella algae JFL [LVDI]
95208
95299
+
Ser
GCT
[ENA]
¡û
>W2010790223
LVDM01000001
Gammaproteobacteria
Shewanella xiamenensis ZYW2 [LVDM]
41219
41310
+
Ser
GCT
[ENA]
¡û
>W2010790229
LVDM01000001
Gammaproteobacteria
Shewanella xiamenensis ZYW2 [LVDM]
41950
42041
+
Ser
GCT
[ENA]
¡û
>W2010790319
LVDN01000001
Gammaproteobacteria
Shewanella xiamenensis ZYW3 [LVDN]
293620
293529
-
Ser
GCT
[ENA]
¡û
>W2010790325
LVDN01000001
Gammaproteobacteria
Shewanella xiamenensis ZYW3 [LVDN]
292889
292798
-
Ser
GCT
[ENA]
¡û
>W2010790487
LVDP01000001
Gammaproteobacteria
Shewanella xiamenensis ZYW5 [LVDP]
293620
293529
-
Ser
GCT
[ENA]
¡û
>W2010790493
LVDP01000001
Gammaproteobacteria
Shewanella xiamenensis ZYW5 [LVDP]
292889
292798
-
Ser
GCT
[ENA]
¡û
>W2010790607
LVDQ01000013
Gammaproteobacteria
Shewanella xiamenensis ZYW6 [LVDQ]
147084
147175
+
Ser
GCT
[ENA]
¡û
>W2010790613
LVDQ01000013
Gammaproteobacteria
Shewanella xiamenensis ZYW6 [LVDQ]
147833
147924
+
Ser
GCT
[ENA]
¡û
>W2010790849
LVDT01000011
Gammaproteobacteria
Shewanella algae SYT2 [LVDT]
84993
84902
-
Ser
GCT
[ENA]
¡û
>W2010790855
LVDT01000011
Gammaproteobacteria
Shewanella algae SYT2 [LVDT]
84357
84266
-
Ser
GCT
[ENA]
¡û
>W2010790957
LVDU01000016
Gammaproteobacteria
Shewanella algae YHL [LVDU]
1255
1164
-
Ser
GCT
[ENA]
¡û
>W2010790963
LVDU01000016
Gammaproteobacteria
Shewanella algae YHL [LVDU]
619
528
-
Ser
GCT
[ENA]
¡û
>W2010791001
LVDV01000018
Gammaproteobacteria
Shewanella algae CLS2 [LVDV]
59108
59199
+
Ser
GCT
[ENA]
¡û
>W2010791007
LVDV01000018
Gammaproteobacteria
Shewanella algae CLS2 [LVDV]
59743
59834
+
Ser
GCT
[ENA]
¡û
>W2010791153
LVDX01000079
Gammaproteobacteria
Shewanella algae CLS3 [LVDX]
18012
17921
-
Ser
GCT
[ENA]
¡û
>W2010810502
MCTV01000068
Gammaproteobacteria
Shewanella sp. 10N.286.52.C2 [MCTV]
153053
153144
+
Ser
GCT
[ENA]
¡û
>W2010810507
MCTV01000068
Gammaproteobacteria
Shewanella sp. 10N.286.52.C2 [MCTV]
153566
153657
+
Ser
GCT
[ENA]
¡û
>W2010810664
MCTY01000136
Gammaproteobacteria
Shewanella sp. 10N.286.52.B9 [MCTY]
39394
39303
-
Ser
GCT
[ENA]
¡û
>W2010810669
MCTY01000136
Gammaproteobacteria
Shewanella sp. 10N.286.52.B9 [MCTY]
38881
38790
-
Ser
GCT
[ENA]
¡û
>W2010813403
MCVI01000021
Gammaproteobacteria
Shewanella sp. 10N.286.48.A6 [MCVI]
57474
57383
-
Ser
GCT
[ENA]
¡û
>W2010813408
MCVI01000021
Gammaproteobacteria
Shewanella sp. 10N.286.48.A6 [MCVI]
56961
56870
-
Ser
GCT
[ENA]
¡û
>W2010963155
NGVS01000004
Gammaproteobacteria
Shewanella sp. 08MAS2251 [NGVS]
25826
25735
-
Ser
GCT
[ENA]
¡û
>W2010963162
NGVS01000004
Gammaproteobacteria
Shewanella sp. 08MAS2251 [NGVS]
25083
24992
-
Ser
GCT
[ENA]
¡û
>W2010963164
NGVS01000004
Gammaproteobacteria
Shewanella sp. 08MAS2251 [NGVS]
24860
24769
-
Ser
GCT
[ENA]
¡û
>W2010963166
NGVS01000004
Gammaproteobacteria
Shewanella sp. 08MAS2251 [NGVS]
24637
24546
-
Ser
GCT
[ENA]
¡û
>W2010963168
NGVS01000004
Gammaproteobacteria
Shewanella sp. 08MAS2251 [NGVS]
24414
24323
-
Ser
GCT
[ENA]
¡û
>W2010966815
NHRI01000016
Gammaproteobacteria
Shewanella sp. BC20 [NHRI]
7525
7434
-
Ser
GCT
[ENA]
¡û
>W2010966821
NHRI01000016
Gammaproteobacteria
Shewanella sp. BC20 [NHRI]
6798
6707
-
Ser
GCT
[ENA]
¡û
>W2010971084
NIJK01000022
Gammaproteobacteria
Shewanella indica KJW27 [NIJK]
388
297
-
Ser
GCT
[ENA]
¡û
>W2010971122
NIJK01000039
Gammaproteobacteria
Shewanella indica KJW27 [NIJK]
89
180
+
Ser
GCT
[ENA]
¡û
>W2010971246
NIJL01000040
Gammaproteobacteria
Shewanella upenei 20-23R [NIJL]
83395
83304
-
Ser
GCT
[ENA]
¡û
>W2010971252
NIJL01000040
Gammaproteobacteria
Shewanella upenei 20-23R [NIJL]
82759
82668
-
Ser
GCT
[ENA]
¡û
>W2010971289
NIJM01000039
Gammaproteobacteria
Shewanella chilikensis JC5 [NIJM]
11336
11427
+
Ser
GCT
[ENA]
¡û
>W2010971291
NIJM01000039
Gammaproteobacteria
Shewanella chilikensis JC5 [NIJM]
11531
11622
+
Ser
GCT
[ENA]
¡û
>W2011284586
QPQU01000005
Gammaproteobacteria
Shewanella pacifica KCTC 12235 [QPQU]
263655
263746
+
Ser
GCT
[ENA]
¡û
>W2011284590
QPQU01000005
Gammaproteobacteria
Shewanella pacifica KCTC 12235 [QPQU]
264070
264161
+
Ser
GCT
[ENA]
¡û
>W2011347393
QZEI01000017
Gammaproteobacteria
Shewanellaceae bacterium C51 [QZEI]
74578
74487
-
Ser
GCT
[ENA]
¡û
>W2011347398
QZEI01000017
Gammaproteobacteria
Shewanellaceae bacterium C51 [QZEI]
74047
73956
-
Ser
GCT
[ENA]
¡û
>W2011638747
SMNR01000001
Gammaproteobacteria
Shewanella algae CECT 5071 [SMNR]
83296
83205
-
Ser
GCT
[ENA]
¡û
>W2011638753
SMNR01000001
Gammaproteobacteria
Shewanella algae CECT 5071 [SMNR]
82660
82569
-
Ser
GCT
[ENA]
¡û
>W2011839713
UGYO01000002
Gammaproteobacteria
Shewanella putrefaciens NCTC10738 [UGYO]
245174
245265
+
Ser
GCT
[ENA]
¡û
>W2012023680
VFSK01000040
Gammaproteobacteria
Shewanella sp. LC6 [VFSK]
53468
53559
+
Ser
GCT
[ENA]
¡û
>W2012023711
VFSK01000134
Gammaproteobacteria
Shewanella sp. LC6 [VFSK]
2022
1931
-
Ser
GCT
[ENA]
¡û
>W2012070497
VKHR01000009
Gammaproteobacteria
Shewanella sp. TC10 [VKHR]
68501
68410
-
Ser
GCT
[ENA]
¡û
>W2012070502
VKHR01000009
Gammaproteobacteria
Shewanella sp. TC10 [VKHR]
67988
67897
-
Ser
GCT
[ENA]
¡û
>W2110029159
BMKO01000003
Gammaproteobacteria
Shewanella carassii CGMCC 1.16033 [BMKO]
301763
301854
+
Ser
GCT
[ENA]
¡û
>W2110029165
BMKO01000003
Gammaproteobacteria
Shewanella carassii CGMCC 1.16033 [BMKO]
302398
302489
+
Ser
GCT
[ENA]
¡û
>W2110034243
BMOP01000004
Gammaproteobacteria
Shewanella xiamenensis JCM 16212 [BMOP]
166508
166417
-
Ser
GCT
[ENA]
¡û
>W2110034249
BMOP01000004
Gammaproteobacteria
Shewanella xiamenensis JCM 16212 [BMOP]
165777
165686
-
Ser
GCT
[ENA]
¡û
>W2110048811
BMYE01000014
Gammaproteobacteria
Shewanella indica KCTC 23171 [BMYE]
95452
95361
-
Ser
GCT
[ENA]
¡û
>W2110048840
BMYE01000037
Gammaproteobacteria
Shewanella indica KCTC 23171 [BMYE]
521
430
-
Ser
GCT
[ENA]
¡û
>W2110069169
BPEV01000007
Gammaproteobacteria
Shewanella sp. KT0246 [BPEV]
29677
29586
-
Ser
GCT
[ENA]
¡û
>W2110399876
JADZGQ010000031
Gammaproteobacteria
Shewanella algae HUD-I2 [JADZGQ]
1148
1057
-
Ser
GCT
[ENA]
¡û
>W2110399882
JADZGQ010000031
Gammaproteobacteria
Shewanella algae HUD-I2 [JADZGQ]
509
418
-
Ser
GCT
[ENA]
¡û
>W2110400242
JADZGU010000028
Gammaproteobacteria
Shewanella algae A97 [JADZGU]
83113
83022
-
Ser
GCT
[ENA]
¡û
>W2110400248
JADZGU010000028
Gammaproteobacteria
Shewanella algae A97 [JADZGU]
82477
82386
-
Ser
GCT
[ENA]
¡û
>W2110400512
JADZGX010000031
Gammaproteobacteria
Shewanella algae A65 [JADZGX]
190685
190594
-
Ser
GCT
[ENA]
¡û
>W2110400518
JADZGX010000031
Gammaproteobacteria
Shewanella algae A65 [JADZGX]
190049
189958
-
Ser
GCT
[ENA]
¡û
>W2110400624
JADZGY010000022
Gammaproteobacteria
Shewanella algae A60 [JADZGY]
53560
53469
-
Ser
GCT
[ENA]
¡û
>W2110400630
JADZGY010000022
Gammaproteobacteria
Shewanella algae A60 [JADZGY]
52924
52833
-
Ser
GCT
[ENA]
¡û
>W2110400878
JADZHB010000027
Gammaproteobacteria
Shewanella algae A56 [JADZHB]
179340
179249
-
Ser
GCT
[ENA]
¡û
>W2110400884
JADZHB010000027
Gammaproteobacteria
Shewanella algae A56 [JADZHB]
178704
178613
-
Ser
GCT
[ENA]
¡û
>W2110400979
JADZHC010000057
Gammaproteobacteria
Shewanella algae A41 [JADZHC]
103633
103542
-
Ser
GCT
[ENA]
¡û
>W2110401250
JADZHF010000023
Gammaproteobacteria
Shewanella algae 950570 [JADZHF]
377505
377414
-
Ser
GCT
[ENA]
¡û
>W2110401256
JADZHF010000023
Gammaproteobacteria
Shewanella algae 950570 [JADZHF]
376869
376778
-
Ser
GCT
[ENA]
¡û
>W2110401440
JADZHH010000032
Gammaproteobacteria
Shewanella algae 590722 [JADZHH]
84682
84591
-
Ser
GCT
[ENA]
¡û
>W2110401446
JADZHH010000032
Gammaproteobacteria
Shewanella algae 590722 [JADZHH]
84046
83955
-
Ser
GCT
[ENA]
¡û
>W2110401620
JADZHJ010000047
Gammaproteobacteria
Shewanella algae 97087 [JADZHJ]
212503
212412
-
Ser
GCT
[ENA]
¡û
>W2110401626
JADZHJ010000047
Gammaproteobacteria
Shewanella algae 97087 [JADZHJ]
211867
211776
-
Ser
GCT
[ENA]
¡û
>W2110401809
JADZHL010000027
Gammaproteobacteria
Shewanella algae CCUG-72638 [JADZHL]
94323
94232
-
Ser
GCT
[ENA]
¡û
>W2110401815
JADZHL010000027
Gammaproteobacteria
Shewanella algae CCUG-72638 [JADZHL]
93687
93596
-
Ser
GCT
[ENA]
¡û
>W2110401900
JADZHM010000028
Gammaproteobacteria
Shewanella algae CCUG-58400 [JADZHM]
379247
379156
-
Ser
GCT
[ENA]
¡û
>W2110401906
JADZHM010000028
Gammaproteobacteria
Shewanella algae CCUG-58400 [JADZHM]
378611
378520
-
Ser
GCT
[ENA]
¡û
>W2110402095
JADZHO010000026
Gammaproteobacteria
Shewanella algae CCUG-50501 [JADZHO]
379498
379407
-
Ser
GCT
[ENA]
¡û
>W2110402101
JADZHO010000026
Gammaproteobacteria
Shewanella algae CCUG-50501 [JADZHO]
378862
378771
-
Ser
GCT
[ENA]
¡û
>W2110402451
JADZHS010000046
Gammaproteobacteria
Shewanella algae CCUG-24987 [JADZHS]
83093
83002
-
Ser
GCT
[ENA]
¡û
>W2110402457
JADZHS010000046
Gammaproteobacteria
Shewanella algae CCUG-24987 [JADZHS]
82458
82367
-
Ser
GCT
[ENA]
¡û
>W2110402541
JADZHT010000033
Gammaproteobacteria
Shewanella algae CCUG-20533 [JADZHT]
83056
82965
-
Ser
GCT
[ENA]
¡û
>W2110402547
JADZHT010000033
Gammaproteobacteria
Shewanella algae CCUG-20533 [JADZHT]
82420
82329
-
Ser
GCT
[ENA]
¡û
>W2110402624
JADZHU010000024
Gammaproteobacteria
Shewanella algae CCUG-15259 [JADZHU]
283863
283772
-
Ser
GCT
[ENA]
¡û
>W2110402630
JADZHU010000024
Gammaproteobacteria
Shewanella algae CCUG-15259 [JADZHU]
283227
283136
-
Ser
GCT
[ENA]
¡û
>W2110402715
JADZHV010000018
Gammaproteobacteria
Shewanella algae CCUG-12945 [JADZHV]
390473
390382
-
Ser
GCT
[ENA]
¡û
>W2110402721
JADZHV010000018
Gammaproteobacteria
Shewanella algae CCUG-12945 [JADZHV]
389837
389746
-
Ser
GCT
[ENA]
¡û
>W2110402979
JADZHY010000020
Gammaproteobacteria
Shewanella algae CCUG-526 [JADZHY]
378905
378814
-
Ser
GCT
[ENA]
¡û
>W2110402985
JADZHY010000020
Gammaproteobacteria
Shewanella algae CCUG-526 [JADZHY]
378269
378178
-
Ser
GCT
[ENA]
¡û
>W2110556822
JAGJDZ010000004
Gammaproteobacteria
Shewanella sp. MMG014 [JAGJDZ]
300151
300242
+
Ser
GCT
[ENA]
¡û
>W2110556826
JAGJDZ010000004
Gammaproteobacteria
Shewanella sp. MMG014 [JAGJDZ]
300566
300657
+
Ser
GCT
[ENA]
¡û
>W2110565601
JAGQAI010000002
Gammaproteobacteria
Shewanella algae MAS2736 [JAGQAI]
1139082
1139173
+
Ser
GCT
[ENA]
¡û
>W2110565607
JAGQAI010000002
Gammaproteobacteria
Shewanella algae MAS2736 [JAGQAI]
1139718
1139809
+
Ser
GCT
[ENA]
¡û
>W2110566346
JAGQAS010000074
Gammaproteobacteria
Shewanella algae LC2016-1 [JAGQAS]
95089
94998
-
Ser
GCT
[ENA]
¡û
>W2110566353
JAGQAS010000074
Gammaproteobacteria
Shewanella algae LC2016-1 [JAGQAS]
94345
94254
-
Ser
GCT
[ENA]
¡û
>C201201537
CP047422
Gammaproteobacteria
Shewanella algae 18064-CSB-B-B [CP047422]
3260080
3260171
+
Ser
GCT
-
¡û
>C201201543
CP047422
Gammaproteobacteria
Shewanella algae 18064-CSB-B-B [CP047422]
3260716
3260807
+
Ser
GCT
-
¡û
>C211023139
AP024612
Gammaproteobacteria
Shewanella algae TUM17378 [AP024612]
3283531
3283440
-
Ser
GCT
-
¡û
>C211023145
AP024612
Gammaproteobacteria
Shewanella algae TUM17378 [AP024612]
3282895
3282804
-
Ser
GCT
-
¡û
>C211023240
AP024613
Gammaproteobacteria
Shewanella algae TUM17379 [AP024613]
3243305
3243214
-
Ser
GCT
-
¡û
>C211023246
AP024613
Gammaproteobacteria
Shewanella algae TUM17379 [AP024613]
3242669
3242578
-
Ser
GCT
-
¡û
>C211023442
AP024615
Gammaproteobacteria
Shewanella algae TUM17383 [AP024615]
3275786
3275695
-
Ser
GCT
-
¡û
>C211023448
AP024615
Gammaproteobacteria
Shewanella algae TUM17383 [AP024615]
3275150
3275059
-
Ser
GCT
-
¡û
>C211023542
AP024616
Gammaproteobacteria
Shewanella algae TUM17384 [AP024616]
3237625
3237534
-
Ser
GCT
-
¡û
>C211023548
AP024616
Gammaproteobacteria
Shewanella algae TUM17384 [AP024616]
3236989
3236898
-
Ser
GCT
-
¡û
>C211023644
AP024617
Gammaproteobacteria
Shewanella algae TUM17386 [AP024617]
1898207
1898116
-
Ser
GCT
-
¡û
>C211023650
AP024617
Gammaproteobacteria
Shewanella algae TUM17386 [AP024617]
1897571
1897480
-
Ser
GCT
-
¡û
>C211023708
AP024618
Gammaproteobacteria
Shewanella carassii TUM17387 [AP024618]
1398270
1398361
+
Ser
GCT
-
¡û
>C211023714
AP024618
Gammaproteobacteria
Shewanella carassii TUM17387 [AP024618]
1398905
1398996
+
Ser
GCT
-
¡û
>C211039250
CP031775
Gammaproteobacteria
Shewanella decolorationis Ni1-3 [CP031775]
3612732
3612641
-
Ser
GCT
-
¡û
>C211039256
CP031775
Gammaproteobacteria
Shewanella decolorationis Ni1-3 [CP031775]
3612004
3611913
-
Ser
GCT
-
¡û
>C211060941
CP043902
Gammaproteobacteria
Shewanella sp. LC6 [CP043902]
1372787
1372878
+
Ser
GCT
-
¡û
>C211060947
CP043902
Gammaproteobacteria
Shewanella sp. LC6 [CP043902]
1373518
1373609
+
Ser
GCT
-
¡û
>W2110703243
JAIVKG010000017
Gammaproteobacteria
Shewanella chilikensis SaN7-13 [JAIVKG]
61380
61471
+
Ser
GCT
[ENA]
¡û
>W2110703249
JAIVKG010000017
Gammaproteobacteria
Shewanella chilikensis SaN7-13 [JAIVKG]
62015
62106
+
Ser
GCT
[ENA]
¡û
>W2110704899
JAIVLE010000022
Gammaproteobacteria
Shewanella indica EaN35-4 [JAIVLE]
53800
53709
-
Ser
GCT
[ENA]
¡û
>W2110704905
JAIVLE010000022
Gammaproteobacteria
Shewanella indica EaN35-4 [JAIVLE]
53164
53073
-
Ser
GCT
[ENA]
¡û
>C211245519
CP068227
Gammaproteobacteria
Shewanella algae A59 [CP068227]
3169163
3169072
-
Ser
GCT
-
¡û
>C211245525
CP068227
Gammaproteobacteria
Shewanella algae A59 [CP068227]
3168527
3168436
-
Ser
GCT
-
¡û
>C211245830
CP068230
Gammaproteobacteria
Shewanella algae CECT 5071 [CP068230]
3283580
3283489
-
Ser
GCT
-
¡û
>C211245836
CP068230
Gammaproteobacteria
Shewanella algae CECT 5071 [CP068230]
3282944
3282853
-
Ser
GCT
-
¡û
>C211258824
CP069350
Gammaproteobacteria
Shewanella sp. LZH-2 [CP069350]
1281478
1281569
+
Ser
GCT
-
¡û
>C211258830
CP069350
Gammaproteobacteria
Shewanella sp. LZH-2 [CP069350]
1282209
1282300
+
Ser
GCT
-
¡û
>C211291897
CP071501
Gammaproteobacteria
Shewanella sp. FJAT-53720 [CP071501]
2874869
2874778
-
Ser
GCT
-
¡û
>C211291903
CP071501
Gammaproteobacteria
Shewanella sp. FJAT-53720 [CP071501]
2874231
2874140
-
Ser
GCT
-
¡û
>C211291989
CP071502
Gammaproteobacteria
Shewanella sp. FJAT-52962 [CP071502]
2950885
2950794
-
Ser
GCT
-
¡û
>C211291995
CP071502
Gammaproteobacteria
Shewanella sp. FJAT-52962 [CP071502]
2950247
2950156
-
Ser
GCT
-
¡û
>C211292063
CP071503
Gammaproteobacteria
Shewanella sp. FJAT-51800 [CP071503]
1350428
1350519
+
Ser
GCT
-
¡û
>C211292068
CP071503
Gammaproteobacteria
Shewanella sp. FJAT-51800 [CP071503]
1350942
1351033
+
Ser
GCT
-
¡û
>C211377726
CP080412
Gammaproteobacteria
Shewanella sp. FJAT-51754 [CP080412]
1369477
1369568
+
Ser
GCT
-
¡û
>C211377732
CP080412
Gammaproteobacteria
Shewanella sp. FJAT-51754 [CP080412]
1370205
1370296
+
Ser
GCT
-
¡û
>C211377827
CP080413
Gammaproteobacteria
Shewanella sp. FJAT-51860 [CP080413]
1077982
1078073
+
Ser
GCT
-
¡û
>C211377833
CP080413
Gammaproteobacteria
Shewanella sp. FJAT-51860 [CP080413]
1078717
1078808
+
Ser
GCT
-
¡û
>C211378020
CP080415
Gammaproteobacteria
Shewanella sp. FJAT-52076 [CP080415]
1220817
1220908
+
Ser
GCT
-
¡û
>C211378260
CP080417
Gammaproteobacteria
Shewanella sp. FJAT-53555 [CP080417]
3206225
3206134
-
Ser
GCT
-
¡û
>C211378265
CP080417
Gammaproteobacteria
Shewanella sp. FJAT-53555 [CP080417]
3205680
3205589
-
Ser
GCT
-
¡û
>C211378312
CP080418
Gammaproteobacteria
Shewanella sp. FJAT-53681 [CP080418]
1407480
1407571
+
Ser
GCT
-
¡û
>C211378317
CP080418
Gammaproteobacteria
Shewanella sp. FJAT-53681 [CP080418]
1408025
1408116
+
Ser
GCT
-
¡û
>C211378505
CP080420
Gammaproteobacteria
Shewanella sp. FJAT-53764 [CP080420]
1398280
1398371
+
Ser
GCT
-
¡û
>C211378510
CP080420
Gammaproteobacteria
Shewanella sp. FJAT-53764 [CP080420]
1398824
1398915
+
Ser
GCT
-
¡û
>C211378695
CP080422
Gammaproteobacteria
Shewanella sp. FJAT-54031 [CP080422]
1377681
1377772
+
Ser
GCT
-
¡û
>C211378700
CP080422
Gammaproteobacteria
Shewanella sp. FJAT-54031 [CP080422]
1378226
1378317
+
Ser
GCT
-
¡û
>C231024937
AP026070
Gammaproteobacteria
Shewanella sp. NFH-SH190041 [AP026070]
3341214
3341123
-
Ser
GCT
-
¡û
>C231024943
AP026070
Gammaproteobacteria
Shewanella sp. NFH-SH190041 [AP026070]
3340578
3340487
-
Ser
GCT
-
¡û
>C231161974
CP079718
Gammaproteobacteria
Shewanella xiamenensis HD6416 [CP079718]
1633707
1633798
+
Ser
GCT
-
¡û
>C231161980
CP079718
Gammaproteobacteria
Shewanella xiamenensis HD6416 [CP079718]
1634436
1634527
+
Ser
GCT
-
¡û
>C231307084
CP091833
Gammaproteobacteria
Shewanella xiamenensis HD6452 [CP091833]
3598465
3598374
-
Ser
GCT
-
¡û
>C231307090
CP091833
Gammaproteobacteria
Shewanella xiamenensis HD6452 [CP091833]
3597733
3597642
-
Ser
GCT
-
¡û
>W2110751369
MWWO01000001
Gammaproteobacteria
Shewanella xiamenensis 111D [MWWO]
275235
275144
-
Ser
GCT
[ENA]
¡û
>W2110751375
MWWO01000001
Gammaproteobacteria
Shewanella xiamenensis 111D [MWWO]
274504
274413
-
Ser
GCT
[ENA]
¡û
>W2110751411
MWWP01000002
Gammaproteobacteria
Shewanella xiamenensis 111B [MWWP]
666597
666688
+
Ser
GCT
[ENA]
¡û
>W2110751417
MWWP01000002
Gammaproteobacteria
Shewanella xiamenensis 111B [MWWP]
667326
667417
+
Ser
GCT
[ENA]
¡û
>C231320721
CP092630
Gammaproteobacteria
Shewanella xiamenensis CQ-Y1 [CP092630]
1289721
1289812
+
Ser
GCT
-
¡û
>W1510077696
CDQH01000018
Gammaproteobacteria
Shewanella algae MARS 14 [CDQH]
938277
938186
-
Ser
GCT
[ENA]
¡û
>W1510077698
CDQH01000018
Gammaproteobacteria
Shewanella algae MARS 14 [CDQH]
937973
937882
-
Ser
GCT
[ENA]
¡û
>W1510077704
CDQH01000018
Gammaproteobacteria
Shewanella algae MARS 14 [CDQH]
937337
937246
-
Ser
GCT
[ENA]
¡û
>W2130033883
JAGQAT010000057
Gammaproteobacteria
Shewanella algae 08MAS2314 [JAGQAT]
60474
60565
+
Ser
GCT
[ENA]
¡û
>W2130033888
JAGQAT010000057
Gammaproteobacteria
Shewanella algae 08MAS2314 [JAGQAT]
61004
61095
+
Ser
GCT
[ENA]
¡û
>C241288177
CP129401
Gammaproteobacteria
Shewanella algae MCCC 1A11468 [CP129401]
3229064
3228973
-
Ser
GCT
-
¡û
>C241288183
CP129401
Gammaproteobacteria
Shewanella algae MCCC 1A11468 [CP129401]
3228428
3228337
-
Ser
GCT
-
¡û
>C241375602
CP143635
Gammaproteobacteria
Shewanella xiamenensis 8M38 [CP143635]
3502468
3502377
-
Ser
GCT
-
¡û
>C241375608
CP143635
Gammaproteobacteria
Shewanella xiamenensis 8M38 [CP143635]
3501737
3501646
-
Ser
GCT
-
¡û
>W2310006327
ABLONE010000010
Gammaproteobacteria
Shewanella algae OTH-19-VL-WA-NY-0079 [ABLONE]
82632
82541
-
Ser
GCT
[ENA]
¡û
>W2310006333
ABLONE010000010
Gammaproteobacteria
Shewanella algae OTH-19-VL-WA-NY-0079 [ABLONE]
81996
81905
-
Ser
GCT
[ENA]
¡û
>W2310020075
BRZX01000005
Gammaproteobacteria
Shewanella xiamenensis NUITM-VS3 [BRZX]
72014
72105
+
Ser
GCT
[ENA]
¡û
>W2310020081
BRZX01000005
Gammaproteobacteria
Shewanella xiamenensis NUITM-VS3 [BRZX]
72745
72836
+
Ser
GCT
[ENA]
¡û
>W2310025236
BSOL01000011
Gammaproteobacteria
Shewanella decolorationis NBRC 103170 [BSOL]
130596
130505
-
Ser
GCT
[ENA]
¡û
>W2310025242
BSOL01000011
Gammaproteobacteria
Shewanella decolorationis NBRC 103170 [BSOL]
129868
129777
-
Ser
GCT
[ENA]
¡û
>W1511302137
JPII01000029
Gammaproteobacteria
Shewanella sp. cp20 [JPII]
190721
190812
+
Ser
GCT
[ENA]
¡û
>W1511302142
JPII01000029
Gammaproteobacteria
Shewanella sp. cp20 [JPII]
191265
191356
+
Ser
GCT
[ENA]
¡û
>W1511306525
JPMA01000012
Gammaproteobacteria
Shewanella algae C6G3 [JPMA]
126
217
+
Ser
GCT
[ENA]
¡û
>W1511403522
JTLE01000094
Gammaproteobacteria
Shewanella sp. ZOR0012 [JTLE]
813992
814083
+
Ser
GCT
[ENA]
¡û
>W1511477938
JWGX01000025
Gammaproteobacteria
Shewanella sp. ECSMB14102 [JWGX]
64991
64900
-
Ser
GCT
[ENA]
¡û
>W1511477944
JWGX01000025
Gammaproteobacteria
Shewanella sp. ECSMB14102 [JWGX]
64356
64265
-
Ser
GCT
[ENA]
¡û
>W1511477948
JWGX01000025
Gammaproteobacteria
Shewanella sp. ECSMB14102 [JWGX]
63947
63856
-
Ser
GCT
[ENA]
¡û
>W1511477950
JWGX01000025
Gammaproteobacteria
Shewanella sp. ECSMB14102 [JWGX]
63724
63633
-
Ser
GCT
[ENA]
¡û
>W1511477952
JWGX01000025
Gammaproteobacteria
Shewanella sp. ECSMB14102 [JWGX]
63501
63410
-
Ser
GCT
[ENA]
¡û
>W1610617909
LGYY01000263
Gammaproteobacteria
Shewanella sp. Sh95 [LGYY]
6626
6535
-
Ser
GCT
[ENA]
¡û
>W1610617915
LGYY01000263
Gammaproteobacteria
Shewanella sp. Sh95 [LGYY]
5895
5804
-
Ser
GCT
[ENA]
¡û
>W1610685431
LKTL01000006
Gammaproteobacteria
Shewanella sp. P1-14-1 [LKTL]
209137
209225
+
Ser
GCT
[ENA]
¡û
>W1710692497
JZWJ01000135
Gammaproteobacteria
Shewanella xiamenensis [JZWJ]
179087
179178
+
Ser
GCT
[ENA]
¡û
>W1710692503
JZWJ01000135
Gammaproteobacteria
Shewanella xiamenensis [JZWJ]
179818
179909
+
Ser
GCT
[ENA]
¡û
>W1710744084
LGYY01000263
Gammaproteobacteria
Shewanella sp. Sh95 [LGYY]
6626
6535
-
Ser
GCT
[ENA]
¡û
>W1710744090
LGYY01000263
Gammaproteobacteria
Shewanella sp. Sh95 [LGYY]
5895
5804
-
Ser
GCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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