tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.158784 (121 seq.)
>W1710808945 LKDZ01000048 Betaproteobacteria Variovorax boronicumulans [LKDZ] 54275 54351 + Met CAT [ENA] ¡û
>W1710821702 LKTV01000080 Betaproteobacteria Variovorax paradoxus [LKTV] 18288 18364 + Met CAT [ENA] ¡û
>W1710821735 LKTW01000044 Betaproteobacteria Variovorax paradoxus [LKTW] 18383 18459 + Met CAT [ENA] ¡û
>W1710860157 LMCQ01000024 Betaproteobacteria Variovorax sp. Root318D1 [LMCQ] 444681 444757 + Met CAT [ENA] ¡û
>W1710861764 LMDW01000015 Betaproteobacteria Variovorax sp. Root411 [LMDW] 109909 109833 - Met CAT [ENA] ¡û
>W1710862483 LMEK01000012 Betaproteobacteria Variovorax sp. Root434 [LMEK] 595938 595862 - Met CAT [ENA] ¡û
>W1710863077 LMEV01000015 Betaproteobacteria Variovorax sp. Root473 [LMEV] 267090 267014 - Met CAT [ENA] ¡û
>W1710870516 LMKO01000023 Betaproteobacteria Xylophilus sp. Leaf220 [LMKO] 193639 193563 - Met CAT [ENA] ¡û
>W1710882305 LMTS01000027 Betaproteobacteria Variovorax sp. WDL1 [LMTS] 11981 11905 - Met CAT [ENA] ¡û
>W1711074173 LSJH01000102 Betaproteobacteria Xylophilus ampelinus [LSJH] 7342 7266 - Met CAT [ENA] ¡û
>W1711250056 LYMK01000001 Betaproteobacteria Variovorax sp. JS1663 [LYMK] 310114 310190 + Met CAT [ENA] ¡û
>W131178402 ARLO01000048 Betaproteobacteria Curvibacter lanceolatus ATCC 14669 [ARLO] 70251 70175 - Met CAT [ENA] ¡û
>W1711751201 MUNO01000010 Betaproteobacteria Polaromonas sp. A23 [MUNO] 107392 107316 - Met CAT [ENA] ¡û
>PL171000247 CP000531 Betaproteobacteria Polaromonas naphthalenivorans CJ2 plasmid:pPNAP02 143245 143169 - Met CAT [ENA] ¡û
>PL171000248 CP000532 Betaproteobacteria Polaromonas naphthalenivorans CJ2 plasmid:pPNAP03 141203 141279 + Met CAT [ENA] ¡û
>PL171000249 CP000533 Betaproteobacteria Polaromonas naphthalenivorans CJ2 plasmid:pPNAP04 112170 112094 - Met CAT [ENA] ¡û
>W131174633 ARIP01000061 Betaproteobacteria Variovorax paradoxus 4MFCol3.1 [ARIP] 134661 134585 - Met CAT [ENA] ¡û
>C017282 CP000529 Betaproteobacteria Polaromonas naphthalenivorans CJ2 [CP000529] 343179 343255 + Met CAT [Ensembl] ¡û
>C017327 CP000316 Betaproteobacteria Polaromonas sp. JS666 [CP000316] 512117 512193 + Met CAT [Ensembl] ¡û
>WENV181046943 ODXX01030415 [ODXX] human metagenome; G_DNA_Buccal mucosa 168 244 + fMet CAT [ENA] ¡û
>WENV181364807 OFPD01001771 [OFPD] sediment metagenome; Lake sediment 171 95 - fMet CAT [ENA] ¡û
>WENV181364915 OFPF01003950 [OFPF] sediment metagenome; Lake sediment 300 224 - fMet CAT [ENA] ¡û
>WENV181370026 OFQR01006596 [OFQR] freshwater metagenome; Freshwater Lake 463 539 + fMet CAT [ENA] ¡û
>WENV181370081 OFQR01012284 [OFQR] freshwater metagenome; Freshwater Lake 509 585 + fMet CAT [ENA] ¡û
>WENV181370441 OFQS01013311 [OFQS] freshwater metagenome; Freshwater Lake 304 228 - fMet CAT [ENA] ¡û
>W141170143 AXXG01000001 Betaproteobacteria Variovorax sp. JGI 0001016-M12 [AXXG] 140526 140602 + Met CAT [ENA] ¡û
>W141170374 AXXS01000058 Betaproteobacteria Variovorax sp. JGI 0001013-M04 [AXXS] 695 619 - Met CAT [ENA] ¡û
>W141170376 AXXS01000062 Betaproteobacteria Variovorax sp. JGI 0001013-M04 [AXXS] 2404 2480 + Met CAT [ENA] ¡û
>C08007641 CP000316 Betaproteobacteria Polaromonas sp. JS666 [CP000316] 512117 512193 + Met CAT [Ensembl] ¡û
>W141266001 CCJP01000005 Betaproteobacteria Polaromonas sp. CG9_12 CJ2 [CCJP] 1658469 1658393 - Met CAT [ENA] ¡û
>W141276688 JADZ01000014 Betaproteobacteria Curvibacter gracilis ATCC BAA-807 [JADZ] 150700 150776 + Met CAT [ENA] ¡û
>WENV183661950 ORJL010151434 [ORJL] groundwater metagenome; groundwater 1943 1867 - fMet CAT [ENA] ¡û
>WENV183669808 ORJL010879485 [ORJL] groundwater metagenome; groundwater 283 359 + fMet CAT [ENA] ¡û
>WENV183670006 ORJL010898419 [ORJL] groundwater metagenome; groundwater 2814 2738 - fMet CAT [ENA] ¡û
>WENV183679328 ORMF010047949 [ORMF] groundwater metagenome; groundwater 146 222 + fMet CAT [ENA] ¡û
>WENV170011797 APMI01091681 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 1322 1398 + Met CAT [ENA] ¡û
>WENV170559286 CXWL01117778 [CXWL] groundwater metagenome; biofilm material 879 955 + Met CAT [ENA] ¡û
>WENV170609421 FUWD011394173 [FUWD] metagenome; unknown 305 229 - Met CAT [ENA] ¡û
>WENV170706860 LNAP01007693 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 1728 1652 - Met CAT [ENA] ¡û
>WENV170708726 LNAQ01000267 [LNAQ] soil metagenome; soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 9579 9503 - Met CAT [ENA] ¡û
>WENV170712585 LNFM01015220 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 2746 2822 + Met CAT [ENA] ¡û
>C181159378 CP027773 Betaproteobacteria Variovorax sp. PMC12 [CP027773, CP027774] 4416256 4416332 + Met CAT - ¡û
>C191073191 CP031013 Betaproteobacteria Polaromonas sp. SP1 [CP031013] 950445 950369 - Met CAT - ¡û
>W141565115 JIBH01000001 Betaproteobacteria Polaromonas sp. EUR3 1.2.1 [JIBH] 3726441 3726365 - Met CAT [ENA] ¡û
>W141695477 JMDZ01000008 Betaproteobacteria Polaromonas glacialis [JMDZ] 577987 577911 - Met CAT [ENA] ¡û
>W141695489 JMDZ01000017 Betaproteobacteria Polaromonas glacialis [JMDZ] 29061 28985 - Met CAT [ENA] ¡û
>W141695490 JMDZ01000031 Betaproteobacteria Polaromonas glacialis [JMDZ] 14352 14428 + Met CAT [ENA] ¡û
>W09101612 AAFQ02000004 Betaproteobacteria Polaromonas sp. JS666 [AAFQ] 124894 124970 + Met CAT [ENA] ¡û
>W09104852 AANM01000001 Betaproteobacteria Polaromonas naphthalenivorans CJ2 [AANM] 422898 422974 + Met CAT [ENA] ¡û
>W09104853 AANM01000001 Betaproteobacteria Polaromonas naphthalenivorans CJ2 [AANM] 477744 477668 - Met CAT [ENA] ¡û
>W09104867 AANM01000010 Betaproteobacteria Polaromonas naphthalenivorans CJ2 [AANM] 108364 108288 - Met CAT [ENA] ¡û
>W09104889 AANM01000024 Betaproteobacteria Polaromonas naphthalenivorans CJ2 [AANM] 6667 6743 + Met CAT [ENA] ¡û
>W1910699893 MERZ01000331 Betaproteobacteria Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_61_11 [MERZ] 31842 31766 - Met CAT [ENA] ¡û
>W1910859511 NBZV01000026 Betaproteobacteria Polaromonas sp. AER18D-145 [NBZV] 5740 5664 - Met CAT [ENA] ¡û
>W1910859548 NBZW01000020 Betaproteobacteria Polaromonas sp. AET17H-212 [NBZW] 6406 6330 - Met CAT [ENA] ¡û
>W1910888713 NESA01000010 Betaproteobacteria Limnohabitans sp. JirII-31 [NESA] 65948 66024 + Met CAT [ENA] ¡û
>W1911647367 QAJK01000163 Betaproteobacteria Variovorax sp. KBW07 [QAJK] 311 235 - Met CAT [ENA] ¡û
>W1911775316 QXMN01000020 Betaproteobacteria Acidovorax cavernicola 1011MAR4D40.2 [QXMN] 92504 92580 + Met CAT [ENA] ¡û
>SRA1001919 SRR001308.131339 Metagenomic characterization of a wastewater treatment plant (SRP000180) 236 160 - Met CAT [SRA]
>SRA1001972 SRR001308.156409 Metagenomic characterization of a wastewater treatment plant (SRP000180) 236 160 - Met CAT [SRA]
>SRA1002213 SRR001308.306588 Metagenomic characterization of a wastewater treatment plant (SRP000180) 236 160 - Met CAT [SRA]
>SRA1003262 SRR002326.349191 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 109 185 + Met CAT [SRA]
>SRA1004189 SRR002328.190446 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 109 33 - Met CAT [SRA]
>SRA1004238 SRR002328.216529 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 130 206 + Met CAT [SRA]
>SRA1004304 SRR002328.258734 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 188 264 + Met CAT [SRA]
>W1810392039 PXZZ01000015 Betaproteobacteria Variovorax sp. WS11 [PXZZ] 22086 22010 - Met CAT [ENA] ¡û
>W1810682485 QKUE01000008 Betaproteobacteria Variovorax sp. GV004 [QKUE] 303072 303148 + Met CAT [ENA] ¡û
>SRA1014582 SRR023845.210504 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 83 159 + Met CAT [SRA]
>W2010108414 BKDI01000007 Betaproteobacteria Variovorax boronicumulans c24 [BKDI] 348712 348636 - fMet CAT [ENA] ¡û
>W2010717549 JACHYD010000005 Betaproteobacteria Variovorax sp. Sphag1J [JACHYD] 503449 503373 - fMet CAT [ENA] ¡û
>W2010721688 JACIBG010000005 Betaproteobacteria Variovorax sp. BK613 [JACIBG] 527675 527751 + fMet CAT [ENA] ¡û
>W2010782021 LMUW01000044 Betaproteobacteria Xenophilus sp. L33 [LMUW] 19342 19266 - fMet CAT [ENA] ¡û
>W2010833319 MERZ01000331 Betaproteobacteria Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_61_11 [MERZ] 31842 31766 - fMet CAT [ENA] ¡û
>W2010936741 NBZV01000026 Betaproteobacteria Polaromonas sp. AER18D-145 [NBZV] 5740 5664 - fMet CAT [ENA] ¡û
>W2010936778 NBZW01000020 Betaproteobacteria Polaromonas sp. AET17H-212 [NBZW] 6406 6330 - fMet CAT [ENA] ¡û
>W2011482838 RQXU01000007 Betaproteobacteria Variovorax sp. T529 [RQXU] 48948 48872 - fMet CAT [ENA] ¡û
>W2011495794 RXFR01000007 Betaproteobacteria Variovorax sp. 553 [RXFR] 445439 445515 + fMet CAT [ENA] ¡û
>W2012046898 VIVL01000001 Betaproteobacteria Variovorax sp. T529 [VIVL] 513536 513612 + fMet CAT [ENA] ¡û
>W2012344176 WJBU01000015 Betaproteobacteria Caenimonas koreensis DSM 17982 EMB320 [WJBU] 101416 101492 + fMet CAT [ENA] ¡û
>W2110026318 BMIG01000016 Betaproteobacteria Polaromonas eurypsychrophila CGMCC 1.15322 [BMIG] 7206 7130 - fMet CAT [ENA] ¡û
>W2110363564 JADOVE010000019 Betaproteobacteria Polaromonas sp. CG_9.11 [JADOVE] 76310 76234 - fMet CAT [ENA] ¡û
>W2110363590 JADOVF010000008 Betaproteobacteria Polaromonas sp. CG_9.2 [JADOVF] 137775 137851 + fMet CAT [ENA] ¡û
>W2110363631 JADOVG010000008 Betaproteobacteria Polaromonas sp. CG_9.7 [JADOVG] 54341 54265 - fMet CAT [ENA] ¡û
>W2110395480 JADWYS010000001 Betaproteobacteria Caenimonas sp. DR4.4 [JADWYS] 2502206 2502130 - fMet CAT [ENA] ¡û
>W2110457146 JAEVYQ010000021 Betaproteobacteria Variovorax paradoxus BFB1_13 [JAEVYQ] 18392 18468 + fMet CAT [ENA] ¡û
>W2110541682 JAGGNU010000010 Betaproteobacteria Variovorax paradoxus ISL-3 [JAGGNU] 127418 127494 + fMet CAT [ENA] ¡û
>C201060720 CP035503 Betaproteobacteria Rhodoferax sp. CHu59-6-5 [CP035503] 4027891 4027815 - fMet CAT - ¡û
>C201172313 CP046023 Betaproteobacteria Polaromonas sp. Pch-P [CP046023] 1044523 1044599 + fMet CAT - ¡û
>C201307047 LR594671 Betaproteobacteria Variovorax sp. PBL-E5 [LR594671] 532863 532939 + fMet CAT - ¡û
>C211132318 CP060296 Betaproteobacteria Variovorax sp. PAMC28562 [CP060296] 1614222 1614298 + fMet CAT - ¡û
>C211172912 CP063166 Betaproteobacteria Variovorax paradoxus VAI-C [CP063166] 6368980 6368904 - fMet CAT - ¡û
>C231247380 CP087964 Betaproteobacteria Polaromonas sp. P1(28)-8 [CP087964] 520465 520541 + fMet CAT - ¡û
>C231247417 CP087965 Betaproteobacteria Polaromonas sp. P2-4 [CP087965] 3315052 3315128 + fMet CAT - ¡û
>C231247475 CP087966 Betaproteobacteria Polaromonas sp. P1-6 [CP087966] 2088922 2088846 - fMet CAT - ¡û
>C241150391 CP051461 Betaproteobacteria Polaromonas vacuolata KCTC 22033 [CP051461] 1586745 1586821 + fMet CAT - ¡û
>C241150408 CP051461 Betaproteobacteria Polaromonas vacuolata KCTC 22033 [CP051461] 3467713 3467637 - fMet CAT - ¡û
>C241342620 CP138513 Betaproteobacteria Variovorax paradoxus SPNA7 [CP138513] 5607777 5607701 - fMet CAT - ¡û
>W1511352952 JROV01000070 Betaproteobacteria Variovorax paradoxus ZNC0006 [JROV] 2533 2457 - Met CAT [ENA] ¡û
>W1511508912 JXQQ01000008 Betaproteobacteria Variovorax paradoxus MEDvA23 [JXQQ] 303389 303465 + Met CAT [ENA] ¡û
>W1511555008 JZWI01000022 Betaproteobacteria Variovorax paradoxus TBEA6 [JZWI] 19450 19374 - Met CAT [ENA] ¡û
>WENV058506 AACY023331432 Marine microbial communities from Global Ocean Sampling (GOS) 430 354 - Met CAT [ENA]
>WENV058858 AACY023344693 Marine microbial communities from Global Ocean Sampling (GOS) 1050 974 - Met CAT [ENA]
>W121084918 AKIV01000065 Betaproteobacteria Polaromonas sp. CF318 [AKIV] 75091 75167 + Met CAT [ENA] ¡û
>W1610072251 BCUU01000023 Betaproteobacteria Variovorax soli NBRC 106424 [BCUU] 23069 22993 - Met CAT [ENA] ¡û
>W1610076220 BCYO01000029 Betaproteobacteria Polaromonas jejuensis NBRC 106434 [BCYO] 5686 5610 - Met CAT [ENA] ¡û
>W121084952 AKIW01000018 Betaproteobacteria Variovorax sp. CF313 [AKIW] 56633 56709 + Met CAT [ENA] ¡û
>W1610685664 LKTV01000080 Betaproteobacteria Variovorax paradoxus [LKTV] 18288 18364 + Met CAT [ENA] ¡û
>W1610722503 LMCQ01000024 Betaproteobacteria Variovorax sp. Root318D1 [LMCQ] 444681 444757 + Met CAT [ENA] ¡û
>W1610724110 LMDW01000015 Betaproteobacteria Variovorax sp. Root411 [LMDW] 109909 109833 - Met CAT [ENA] ¡û
>W1610732862 LMKO01000023 Betaproteobacteria Xylophilus sp. Leaf220 [LMKO] 193639 193563 - Met CAT [ENA] ¡û
>W1610744231 LMTS01000027 Betaproteobacteria Variovorax sp. WDL1 [LMTS] 11981 11905 - Met CAT [ENA] ¡û
>W1610913478 LSJH01000102 Betaproteobacteria Xylophilus ampelinus [LSJH] 7342 7266 - Met CAT [ENA] ¡û
>W1710069453 BCUU01000023 Betaproteobacteria Variovorax soli NBRC 106424 [BCUU] 23069 22993 - Met CAT [ENA] ¡û
>W1710074035 BCYO01000029 Betaproteobacteria Polaromonas jejuensis NBRC 106434 [BCYO] 5686 5610 - Met CAT [ENA] ¡û
>W1710512938 FMZU01000006 Betaproteobacteria Variovorax sp. CF079 [FMZU] 232065 232141 + Met CAT [ENA] ¡û
>W1710523411 FNHX01000009 Betaproteobacteria Polaromonas sp. JS666 [FNHX] 75146 75222 + Met CAT [ENA] ¡û
>W1710531358 FNPM01000003 Betaproteobacteria Variovorax sp. YR266 [FNPM] 43853 43777 - Met CAT [ENA] ¡û
>W1710542714 FNZJ01000005 Betaproteobacteria Variovorax sp. OK202 [FNZJ] 400469 400545 + Met CAT [ENA] ¡û
>W1710557395 FOKZ01000008 Betaproteobacteria Polaromonas sp. OV174 [FOKZ] 56698 56622 - Met CAT [ENA] ¡û
>W1710562285 FOOV01000025 Betaproteobacteria Variovorax sp. NFACC27 [FOOV] 60524 60448 - Met CAT [ENA] ¡û
>W1710578310 FPBM01000005 Betaproteobacteria Polaromonas sp. YR568 [FPBM] 151803 151727 - Met CAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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