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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.161402 (173 seq.)
>W1710860668
LMDB01000012
Betaproteobacteria
Duganella sp. Root336D2 [LMDB]
234427
234351
-
Met
CAT
[ENA]
¡û
>W1710860669
LMDB01000012
Betaproteobacteria
Duganella sp. Root336D2 [LMDB]
234054
233978
-
Met
CAT
[ENA]
¡û
>W1710863134
LMEW01000023
Betaproteobacteria
Massilia sp. Root133 [LMEW]
91138
91062
-
Met
CAT
[ENA]
¡û
>W1710863135
LMEW01000023
Betaproteobacteria
Massilia sp. Root133 [LMEW]
90982
90906
-
Met
CAT
[ENA]
¡û
>W1710864587
LMFZ01000007
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
29612
29688
+
Met
CAT
[ENA]
¡û
>W1710864588
LMFZ01000007
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
38783
38859
+
Met
CAT
[ENA]
¡û
>W1710867082
LMHZ01000013
Betaproteobacteria
Noviherbaspirillum sp. Root189 [LMHZ]
61556
61632
+
Met
CAT
[ENA]
¡û
>W1710867249
LMIC01000048
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
112049
112125
+
Met
CAT
[ENA]
¡û
>W1710867250
LMIC01000048
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
112422
112498
+
Met
CAT
[ENA]
¡û
>W1711394672
MEQN01000087
Betaproteobacteria
Betaproteobacteria bacterium RBG_16_58_11 [MEQN]
4463
4539
+
Met
CAT
[ENA]
¡û
>W1711413740
MGWS01000033
Betaproteobacteria
Gallionellales bacterium GWA2_60_18 [MGWS]
69825
69749
-
Met
CAT
[ENA]
¡û
>W1711583483
MNXH01000032
Betaproteobacteria
Gallionellaceae bacterium CG1_02_60_948 [MNXH]
1668
1592
-
Met
CAT
[ENA]
¡û
>W131219579
ATYR01000018
Betaproteobacteria
Massilia alkalitolerans DSM 17462 [ATYR]
97208
97132
-
Met
CAT
[ENA]
¡û
>W131219580
ATYR01000018
Betaproteobacteria
Massilia alkalitolerans DSM 17462 [ATYR]
97058
96982
-
Met
CAT
[ENA]
¡û
>W131225152
AUDI01000011
Betaproteobacteria
Pseudoduganella violaceinigra DSM 15887 [AUDI]
49356
49280
-
Met
CAT
[ENA]
¡û
>W131225153
AUDI01000011
Betaproteobacteria
Pseudoduganella violaceinigra DSM 15887 [AUDI]
48179
48103
-
Met
CAT
[ENA]
¡û
>C171088476
CP019038
Betaproteobacteria
Massilia putida 6NM-7 [CP019038]
3078500
3078576
+
Met
CAT
-
¡û
>C171088477
CP019038
Betaproteobacteria
Massilia putida 6NM-7 [CP019038]
3078641
3078717
+
Met
CAT
-
¡û
>WENV180018313
FSYV01000526
[FSYV] metagenome; soil
31076
31152
+
Met
CAT
[ENA]
¡û
>WENV180022331
FTFY01000950
[FTFY] metagenome; soil
11125
11201
+
Met
CAT
[ENA]
¡û
>WENV180026707
FTIU01033320
[FTIU] metagenome; soil
291
367
+
Met
CAT
[ENA]
¡û
>WENV180028069
FTIZ01655975
[FTIZ] metagenome; soil
96
172
+
Met
CAT
[ENA]
¡û
>WENV180029884
FTJL01011982
[FTJL] metagenome; soil
487
563
+
Met
CAT
[ENA]
¡û
>WENV180035752
FTLB01003649
[FTLB] metagenome; soil
2
78
+
Met
CAT
[ENA]
¡û
>WENV180035768
FTLB01005477
[FTLB] metagenome; soil
100937
100861
-
Met
CAT
[ENA]
¡û
>WENV180041390
LLBZ010117231
[LLBZ] soil metagenome; soil from tomato rhizosphere
2153
2229
+
Met
CAT
[ENA]
¡û
>WENV180248431
OBEQ010108141
[OBEQ] groundwater metagenome; groundwater
710
786
+
Met
CAT
[ENA]
¡û
>WENV180255388
OBEQ010720570
[OBEQ] groundwater metagenome; groundwater
827
751
-
Met
CAT
[ENA]
¡û
>WENV180260750
OBEQ011227970
[OBEQ] groundwater metagenome; groundwater
4
80
+
Met
CAT
[ENA]
¡û
>WENV180260871
OBEQ011240151
[OBEQ] groundwater metagenome; groundwater
596
672
+
Met
CAT
[ENA]
¡û
>WENV180292960
OBIV01730757
[OBIV] soil metagenome; Clay
117
193
+
Met
CAT
[ENA]
¡û
>WENV180305170
OBJK01014479
[OBJK] human gut metagenome; Skin biopsy
267
191
-
Met
CAT
[ENA]
¡û
>WENV183695560
ORMF012409418
[ORMF] groundwater metagenome; groundwater
321
397
+
Met
CAT
[ENA]
¡û
>WENV183726689
PJTO01000068
[PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment
121921
121845
-
Met
CAT
[ENA]
¡û
>WENV183726690
PJTO01000068
[PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment
121771
121695
-
Met
CAT
[ENA]
¡û
>WENV183730099
PJTR01000664
[PJTR] soil metagenome; Soil (2) enriched on wood chips: beechwood xylan treatment
1132
1208
+
Met
CAT
[ENA]
¡û
>WENV183737269
PJUD01002342
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
3758
3682
-
Met
CAT
[ENA]
¡û
>WENV183737270
PJUD01002342
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
3608
3532
-
Met
CAT
[ENA]
¡û
>WENV183739181
PJUE01002721
[PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment
1657
1581
-
Met
CAT
[ENA]
¡û
>WENV170621750
FUWD013071632
[FUWD] metagenome; unknown
98
22
-
Met
CAT
[ENA]
¡û
>WENV170629937
FUWD013287319
[FUWD] metagenome; unknown
98
22
-
Met
CAT
[ENA]
¡û
>WENV170662547
JXWW01097401
[JXWW] soil metagenome; rice field; organic GM Plot
521
445
-
Met
CAT
[ENA]
¡û
>WENV170711066
LNFM01003428
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
2909
2985
+
Met
CAT
[ENA]
¡û
>WENV170712500
LNFM01014122
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
4305
4229
-
Met
CAT
[ENA]
¡û
>C181071842
CP022736
Betaproteobacteria
Herbaspirillum sp. meg3 [CP022736]
4409256
4409332
+
Met
CAT
-
¡û
>C191125967
CP034464
Betaproteobacteria
Undibacterium parvum DSM 23061 [CP034464]
3471839
3471763
-
Met
CAT
-
¡û
>C191138928
CP035311
Betaproteobacteria
Janthinobacterium sp. 17J80-10 [CP035311]
3679243
3679319
+
Met
CAT
-
¡û
>C191173959
CP040017
Betaproteobacteria
Pseudoduganella umbonata DSMZ 26121 [CP040017]
3868022
3868098
+
Met
CAT
-
¡û
>W141821354
JQNN01000001
Betaproteobacteria
Massilia sp. 9096 [JQNN]
3523011
3523087
+
Met
CAT
[ENA]
¡û
>W141821355
JQNN01000001
Betaproteobacteria
Massilia sp. 9096 [JQNN]
3523151
3523227
+
Met
CAT
[ENA]
¡û
>W1910548783
FZOT01000015
Betaproteobacteria
Noviherbaspirillum humi U15 [FZOT]
58561
58485
-
Met
CAT
[ENA]
¡û
>W1910698926
MEQR01000069
Betaproteobacteria
Betaproteobacteria bacterium RBG_19FT_COMBO_58_11 [MEQR]
4773
4849
+
Met
CAT
[ENA]
¡û
>W1911802787
QYUO01000001
Betaproteobacteria
Herbaspirillum sp. K1R23-30 [QYUO]
2851038
2851114
+
Met
CAT
[ENA]
¡û
>W1810330114
PUIP01000002
Betaproteobacteria
Massilia phosphatilytica 12-OD1 [PUIP]
369939
370015
+
Met
CAT
[ENA]
¡û
>W1810330115
PUIP01000002
Betaproteobacteria
Massilia phosphatilytica 12-OD1 [PUIP]
370081
370157
+
Met
CAT
[ENA]
¡û
>W1810659456
QJKB01000004
Betaproteobacteria
Undibacterium pigrum DSM 19792 [QJKB]
46498
46422
-
Met
CAT
[ENA]
¡û
>C151082392
CP011409
Betaproteobacteria
Herbaspirillum hiltneri N3 [CP011409]
1528285
1528209
-
Met
CAT
-
¡û
>C151092622
CP012201
Betaproteobacteria
Massilia sp. NR 4-1 [CP012201]
5540291
5540215
-
Met
CAT
-
¡û
>W2010309989
CABWLS010000016
Betaproteobacteria
Massilia sp. 9I [CABWLS]
535715
535639
-
Met
CAT
[ENA]
¡û
>W2010430544
FZOT01000015
Betaproteobacteria
Noviherbaspirillum humi U15 [FZOT]
58561
58485
-
Met
CAT
[ENA]
¡û
>W2010488520
JAAIVB010000021
Betaproteobacteria
Noviherbaspirillum sp. 17J57-3 [JAAIVB]
21730
21654
-
Met
CAT
[ENA]
¡û
>W2010536030
JAAQOM010000022
Betaproteobacteria
Massilia sp. TW-1 [JAAQOM]
86334
86258
-
Met
CAT
[ENA]
¡û
>W2010536031
JAAQOM010000022
Betaproteobacteria
Massilia sp. TW-1 [JAAQOM]
86189
86113
-
Met
CAT
[ENA]
¡û
>W2010609460
JABMJK010000002
Betaproteobacteria
Duganella sp. SG902 [JABMJK]
119154
119078
-
Met
CAT
[ENA]
¡û
>W2010609461
JABMJK010000002
Betaproteobacteria
Duganella sp. SG902 [JABMJK]
119012
118936
-
Met
CAT
[ENA]
¡û
>W2010641321
JABWEB010000006
Betaproteobacteria
Massilia sp. BJB1822 [JABWEB]
70741
70817
+
Met
CAT
[ENA]
¡û
>W2010667412
JACBYS010000002
Betaproteobacteria
Duganella sp. 1224 [JACBYS]
634790
634866
+
Met
CAT
[ENA]
¡û
>W2010696397
JACHCU010000001
Betaproteobacteria
Herbaspirillum sp. SJZ102 [JACHCU]
666575
666499
-
Met
CAT
[ENA]
¡û
>W2010716103
JACHXD010000010
Betaproteobacteria
Massilia violacea CECT 8897 [JACHXD]
52927
53003
+
Met
CAT
[ENA]
¡û
>W2010716969
JACHXS010000002
Betaproteobacteria
Massilia umbonata CECT 7753 [JACHXS]
621149
621073
-
Met
CAT
[ENA]
¡û
>W2010717602
JACHYE010000011
Betaproteobacteria
Herbaspirillum sp. Sphag64 [JACHYE]
69161
69085
-
Met
CAT
[ENA]
¡û
>W2010832352
MEQR01000069
Betaproteobacteria
Betaproteobacteria bacterium RBG_19FT_COMBO_58_11 [MEQR]
4773
4849
+
Met
CAT
[ENA]
¡û
>W2010833508
MESE01000057
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36 [MESE]
136745
136821
+
Met
CAT
[ENA]
¡û
>W2011344418
QYUO01000001
Betaproteobacteria
Herbaspirillum sp. K1R23-30 [QYUO]
2851038
2851114
+
Met
CAT
[ENA]
¡û
>W2011580007
SHKT01000001
Betaproteobacteria
Duganella sp. BK054 [SHKT]
711157
711081
-
Met
CAT
[ENA]
¡û
>W2011580008
SHKT01000001
Betaproteobacteria
Duganella sp. BK054 [SHKT]
698518
698442
-
Met
CAT
[ENA]
¡û
>W2011676025
SPUM01000133
Betaproteobacteria
Massilia sp. ONC3 [SPUM]
224
148
-
Met
CAT
[ENA]
¡û
>W2011676273
SPVF01000063
Betaproteobacteria
Massilia sp. MC02 [SPVF]
11489
11413
-
Met
CAT
[ENA]
¡û
>W2011676359
SPVG01000279
Betaproteobacteria
Duganella sp. DN04 [SPVG]
138
214
+
Met
CAT
[ENA]
¡û
>W2012018713
VFNH01000002
Betaproteobacteria
Herbaspirillum sp. SJZ107 [VFNH]
537463
537387
-
Met
CAT
[ENA]
¡û
>W2012018714
VFNH01000002
Betaproteobacteria
Herbaspirillum sp. SJZ107 [VFNH]
537315
537239
-
Met
CAT
[ENA]
¡û
>W2012018745
VFNI01000002
Betaproteobacteria
Herbaspirillum sp. SJZ106 [VFNI]
666575
666499
-
Met
CAT
[ENA]
¡û
>W2012082007
VLKW01000003
Betaproteobacteria
Massilia flava CGMCC 1.10685 [VLKW]
302822
302898
+
Met
CAT
[ENA]
¡û
>W2012082008
VLKW01000003
Betaproteobacteria
Massilia flava CGMCC 1.10685 [VLKW]
302982
303058
+
Met
CAT
[ENA]
¡û
>W2012337181
WINI01000001
Betaproteobacteria
Glaciimonas sp. GS1 [WINI]
1159617
1159541
-
Met
CAT
[ENA]
¡û
>W2012357382
WKJK01000012
Betaproteobacteria
Duganella sp. FT80W [WKJK]
119174
119250
+
Met
CAT
[ENA]
¡û
>W2012399124
WNKX01000004
Betaproteobacteria
Pseudoduganella eburnea JCM 31587 [WNKX]
220747
220671
-
Met
CAT
[ENA]
¡û
>W2012399125
WNKX01000004
Betaproteobacteria
Pseudoduganella eburnea JCM 31587 [WNKX]
219531
219455
-
Met
CAT
[ENA]
¡û
>W2012399239
WNKY01000074
Betaproteobacteria
Duganella radicis KCTC 22382 [WNKY]
2013
1937
-
Met
CAT
[ENA]
¡û
>W2012426962
WSES01000004
Betaproteobacteria
Massilia sp. NEAU-DD11 [WSES]
402853
402929
+
Met
CAT
[ENA]
¡û
>W2012426963
WSES01000004
Betaproteobacteria
Massilia sp. NEAU-DD11 [WSES]
403009
403085
+
Met
CAT
[ENA]
¡û
>W2012469286
WWCJ01000006
Betaproteobacteria
Massilia guangdongensis DS3 [WWCJ]
209158
209234
+
Met
CAT
[ENA]
¡û
>W2012469287
WWCJ01000006
Betaproteobacteria
Massilia guangdongensis DS3 [WWCJ]
209262
209338
+
Met
CAT
[ENA]
¡û
>W2012469385
WWCK01000005
Betaproteobacteria
Duganella sp. FT9W FT55W [WWCK]
629157
629233
+
Met
CAT
[ENA]
¡û
>W2012469386
WWCK01000005
Betaproteobacteria
Duganella sp. FT9W FT55W [WWCK]
629299
629375
+
Met
CAT
[ENA]
¡û
>W2012469692
WWCO01000018
Betaproteobacteria
Duganella sp. FT94W [WWCO]
88629
88553
-
Met
CAT
[ENA]
¡û
>W2012469750
WWCP01000016
Betaproteobacteria
Duganella sp. FT50W [WWCP]
105502
105426
-
Met
CAT
[ENA]
¡û
>W2110097089
CAJEVT010000004
Betaproteobacteria
Herminiimonas sp. Marseille-P9896 [CAJEVT]
238685
238609
-
Met
CAT
[ENA]
¡û
>ENV09004055
ADIG01001566
Groundwater metagenome 4000601.lucy.pga.C1
370
294
-
Met
CAT
[ENA]
¡û
>W2110241558
JACOFS010000010
Betaproteobacteria
Undibacterium oligocarboniphilum CGMCC 1.12448 [JACOFS]
101585
101661
+
Met
CAT
[ENA]
¡û
>W2110242080
JACOGC010000008
Betaproteobacteria
Undibacterium sp. FT31W [JACOGC]
9411
9335
-
Met
CAT
[ENA]
¡û
>W2110289216
JACYOX010000002
Betaproteobacteria
Noviherbaspirillum soli SUEMI10 [JACYOX]
303630
303554
-
Met
CAT
[ENA]
¡û
>W2110290369
JACYUA010000039
Betaproteobacteria
Massilia sp. CFBP 13647 CFBP13647 [JACYUA]
7750
7674
-
Met
CAT
[ENA]
¡û
>W2110290370
JACYUA010000039
Betaproteobacteria
Massilia sp. CFBP 13647 CFBP13647 [JACYUA]
7616
7540
-
Met
CAT
[ENA]
¡û
>W2110290440
JACYUC010000002
Betaproteobacteria
Oxalobacteraceae sp. CFBP 8763 CFBP8763 [JACYUC]
613340
613416
+
Met
CAT
[ENA]
¡û
>W2110290441
JACYUC010000002
Betaproteobacteria
Oxalobacteraceae sp. CFBP 8763 CFBP8763 [JACYUC]
613476
613552
+
Met
CAT
[ENA]
¡û
>W2110290566
JACYUE010000001
Betaproteobacteria
Oxalobacteraceae sp. CFBP 8761 CFBP8761 [JACYUE]
510542
510466
-
Met
CAT
[ENA]
¡û
>W2110290567
JACYUE010000001
Betaproteobacteria
Oxalobacteraceae sp. CFBP 8761 CFBP8761 [JACYUE]
510406
510330
-
Met
CAT
[ENA]
¡û
>W2110291261
JACYUX010000001
Betaproteobacteria
Oxalobacteraceae sp. CFBP 8753 CFBP8753 [JACYUX]
459358
459282
-
Met
CAT
[ENA]
¡û
>W2110291262
JACYUX010000001
Betaproteobacteria
Oxalobacteraceae sp. CFBP 8753 CFBP8753 [JACYUX]
459222
459146
-
Met
CAT
[ENA]
¡û
>W2110291337
JACYUY010000039
Betaproteobacteria
Massilia sp. CFBP 13721 CFBP13721 [JACYUY]
7738
7662
-
Met
CAT
[ENA]
¡û
>W2110291338
JACYUY010000039
Betaproteobacteria
Massilia sp. CFBP 13721 CFBP13721 [JACYUY]
7604
7528
-
Met
CAT
[ENA]
¡û
>W2110292663
JACYXF010000023
Betaproteobacteria
Noviherbaspirillum malthae CC-AFH3 [JACYXF]
16330
16406
+
Met
CAT
[ENA]
¡û
>W2110331054
JADKYX010000002
Betaproteobacteria
Massilia rhizosphaerae NEAU-GH312 [JADKYX]
31536
31612
+
Met
CAT
[ENA]
¡û
>W2110331055
JADKYX010000002
Betaproteobacteria
Massilia rhizosphaerae NEAU-GH312 [JADKYX]
31686
31762
+
Met
CAT
[ENA]
¡û
>W2110360978
JADOEL010000004
Betaproteobacteria
Herminiimonas contaminans Marseille-Q4544 [JADOEL]
238235
238159
-
Met
CAT
[ENA]
¡û
>W2110437936
JAEPBG010000001
Betaproteobacteria
Noviherbaspirillum pedocola DKR-6 [JAEPBG]
496389
496465
+
Met
CAT
[ENA]
¡û
>W2110566796
JAGQED010000027
Betaproteobacteria
Collimonas antrihumi DSM 104040 [JAGQED]
6288
6212
-
Met
CAT
[ENA]
¡û
>W2110566829
JAGQEE010000004
Betaproteobacteria
Collimonas sp. RLT1W51 [JAGQEE]
209001
209077
+
Met
CAT
[ENA]
¡û
>W2110566856
JAGQEF010000003
Betaproteobacteria
Collimonas sp. RXD172-2 [JAGQEF]
339715
339791
+
Met
CAT
[ENA]
¡û
>W2110566938
JAGQEG010000177
Betaproteobacteria
Collimonas sp. RXD178 [JAGQEG]
4343
4419
+
Met
CAT
[ENA]
¡û
>W2110570617
JAGSPJ010000002
Betaproteobacteria
Undibacterium sp. FT137W [JAGSPJ]
107204
107280
+
Met
CAT
[ENA]
¡û
>W2110570837
JAGSPN010000014
Betaproteobacteria
Undibacterium sp. LFS511W [JAGSPN]
110653
110729
+
Met
CAT
[ENA]
¡û
>C201251028
CP051685
Betaproteobacteria
Duganella sp. GN2-R2 [CP051685]
2763891
2763815
-
Met
CAT
-
¡û
>C201251029
CP051685
Betaproteobacteria
Duganella sp. GN2-R2 [CP051685]
2763750
2763674
-
Met
CAT
-
¡û
>W2110696216
JAIUCY010000005
Betaproteobacteria
Herbaspirillum seropedicae alder98 [JAIUCY]
209309
209385
+
Met
CAT
[ENA]
¡û
>C211168357
CP062941
Betaproteobacteria
Massilia sp. LPB0304 [CP062941]
2077432
2077356
-
Met
CAT
-
¡û
>C211168358
CP062941
Betaproteobacteria
Massilia sp. LPB0304 [CP062941]
2077294
2077218
-
Met
CAT
-
¡û
>C231003916
AP023423
Betaproteobacteria
Sideroxyarcus emersonii MIZ01 [AP023423]
372918
372994
+
Met
CAT
-
¡û
>C231064922
CP053748
Betaproteobacteria
Massilia sp. erpn [CP053748]
2796115
2796039
-
Met
CAT
-
¡û
>C231254087
CP088952
Betaproteobacteria
Massilia sp. DM-R-R2A-13 [CP088952]
3824220
3824296
+
Met
CAT
-
¡û
>C231323460
CP092780
Betaproteobacteria
Massilia sp. MB5 [CP092780]
501365
501441
+
Met
CAT
-
¡û
>C231468949
CP103371
Betaproteobacteria
Massilia sp. H6 [CP103371]
3779268
3779344
+
Met
CAT
-
¡û
>C231468950
CP103371
Betaproteobacteria
Massilia sp. H6 [CP103371]
3779416
3779492
+
Met
CAT
-
¡û
>C231623025
CP119520
Betaproteobacteria
Telluria mixta ACM 1762 [CP119520]
2931434
2931358
-
Met
CAT
-
¡û
>C231623026
CP119520
Betaproteobacteria
Telluria mixta ACM 1762 [CP119520]
2931292
2931216
-
Met
CAT
-
¡û
>C241007179
AP022853
Betaproteobacteria
Sulfurimicrobium lacus skT11 [AP022853]
802876
802800
-
Met
CAT
-
¡û
>C241113980
CP046904
Betaproteobacteria
Pseudoduganella flava DSM 26639 [CP046904]
2780174
2780250
+
Met
CAT
-
¡û
>C241113981
CP046904
Betaproteobacteria
Pseudoduganella flava DSM 26639 [CP046904]
2780334
2780410
+
Met
CAT
-
¡û
>C241145445
CP050451
Betaproteobacteria
Massilia sp. Se16.2.3 [CP050451]
42574
42650
+
Met
CAT
-
¡û
>C241145446
CP050451
Betaproteobacteria
Massilia sp. Se16.2.3 [CP050451]
42711
42787
+
Met
CAT
-
¡û
>C241145604
CP050454
Betaproteobacteria
Massilia sp. Dwa41.01b [CP050454]
4596719
4596795
+
Met
CAT
-
¡û
>C241145605
CP050454
Betaproteobacteria
Massilia sp. Dwa41.01b [CP050454]
4596856
4596932
+
Met
CAT
-
¡û
>C241380694
LR699166
Betaproteobacteria
Sideroxydans sp. CL21 [LR699166]
463010
463086
+
Met
CAT
-
¡û
>C10111854
CP001965
Betaproteobacteria
Sideroxydans lithotrophicus ES-1 [CP001965]
464460
464536
+
Met
CAT
[Ensembl]
¡û
>C11105070
CP002745
Betaproteobacteria
Collimonas fungivorans Ter331 [CP002745]
4165411
4165487
+
Met
CAT
[Ensembl]
¡û
>W1511310198
JPQD01000018
Betaproteobacteria
Massilia sp. JS1662 [JPQD]
79451
79375
-
Met
CAT
[ENA]
¡û
>W1511310199
JPQD01000018
Betaproteobacteria
Massilia sp. JS1662 [JPQD]
79296
79220
-
Met
CAT
[ENA]
¡û
>W1511683839
LFLT01000026
Betaproteobacteria
Herbaspirillum chlorophenolicum CPW301 [LFLT]
62994
63070
+
Met
CAT
[ENA]
¡û
>C161043179
CP012640
Betaproteobacteria
Massilia sp. WG5 [CP012640]
5461201
5461277
+
Met
CAT
-
¡û
>C161053591
CP013232
Betaproteobacteria
Collimonas fungivorans Ter6 [CP013232]
4600118
4600194
+
Met
CAT
[Ensembl]
¡û
>C161053646
CP013233
Betaproteobacteria
Collimonas arenae Ter10 [CP013233]
3668650
3668726
+
Met
CAT
-
¡û
>C161053690
CP013234
Betaproteobacteria
Collimonas pratensis Ter91 [CP013234]
4554384
4554460
+
Met
CAT
[Ensembl]
¡û
>C161053790
CP013236
Betaproteobacteria
Collimonas pratensis Ter291 [CP013236]
4579952
4580028
+
Met
CAT
[Ensembl]
¡û
>W121085183
AKJA01000129
Betaproteobacteria
Herbaspirillum sp. YR522 [AKJA]
69221
69297
+
Met
CAT
[ENA]
¡û
>W1610723014
LMDB01000012
Betaproteobacteria
Duganella sp. Root336D2 [LMDB]
234427
234351
-
Met
CAT
[ENA]
¡û
>W1610723015
LMDB01000012
Betaproteobacteria
Duganella sp. Root336D2 [LMDB]
234054
233978
-
Met
CAT
[ENA]
¡û
>W1610725480
LMEW01000023
Betaproteobacteria
Massilia sp. Root133 [LMEW]
91138
91062
-
Met
CAT
[ENA]
¡û
>W1610725481
LMEW01000023
Betaproteobacteria
Massilia sp. Root133 [LMEW]
90982
90906
-
Met
CAT
[ENA]
¡û
>W1610726933
LMFZ01000007
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
29612
29688
+
Met
CAT
[ENA]
¡û
>W1610726934
LMFZ01000007
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
38783
38859
+
Met
CAT
[ENA]
¡û
>W1610729428
LMHZ01000013
Betaproteobacteria
Noviherbaspirillum sp. Root189 [LMHZ]
61556
61632
+
Met
CAT
[ENA]
¡û
>W1610729595
LMIC01000048
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
112049
112125
+
Met
CAT
[ENA]
¡û
>W1610729596
LMIC01000048
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
112422
112498
+
Met
CAT
[ENA]
¡û
>W1710512803
FMZS01000001
Betaproteobacteria
Massilia sp. PDC64 [FMZS]
837367
837443
+
Met
CAT
[ENA]
¡û
>W1710512804
FMZS01000001
Betaproteobacteria
Massilia sp. PDC64 [FMZS]
837515
837591
+
Met
CAT
[ENA]
¡û
>W1710557612
FOLD01000037
Betaproteobacteria
Massilia yuzhufengensis [FOLD]
4420
4344
-
Met
CAT
[ENA]
¡û
>W1710557613
FOLD01000037
Betaproteobacteria
Massilia yuzhufengensis [FOLD]
4283
4207
-
Met
CAT
[ENA]
¡û
>W1710561489
FOOF01000001
Betaproteobacteria
Duganella sp. CF458 [FOOF]
315015
315091
+
Met
CAT
[ENA]
¡û
>W1710561490
FOOF01000001
Betaproteobacteria
Duganella sp. CF458 [FOOF]
323744
323820
+
Met
CAT
[ENA]
¡û
>W1710564226
FOQI01000013
Betaproteobacteria
Collimonas sp. OK307 [FOQI]
119164
119240
+
Met
CAT
[ENA]
¡û
>W1710578376
FPBO01000002
Betaproteobacteria
Pseudoduganella namucuonensis [FPBO]
423809
423885
+
Met
CAT
[ENA]
¡û
>W1710578377
FPBO01000002
Betaproteobacteria
Pseudoduganella namucuonensis [FPBO]
423985
424061
+
Met
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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