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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.162002 (202 seq.)
>C171094783
CP019469
Bacillota
Clostridioides difficile LEM1 [CP019469]
118124
118048
-
Asp
GTC
-
¡û
>C171100535
CP019870
Bacillota
Clostridioides difficile BR81 [CP019870]
4027219
4027143
-
Asp
GTC
-
¡û
>WENV180098034
MTBK01224061
[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
788
712
-
Asp
GTC
[ENA]
¢þ
>WENV180098729
MTBK01263448
[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
1408
1484
+
Asp
GTC
[ENA]
¢þ
>WENV180411999
OBUZ01014737
[OBUZ] human gut metagenome; faeces
225
301
+
Asp
GTC
[ENA]
¢þ
>W141101093
AVLE01000005
Bacillota
Clostridioides difficile Y307 [AVLE]
112
188
+
Asp
GTC
[ENA]
¡û
>W141102438
AVMR01000009
Bacillota
Clostridioides difficile P61 [AVMR]
251
327
+
Asp
GTC
[ENA]
¡û
>W141168193
AXUS01000015
Bacillota
Clostridioides mangenotii TR [AXUS]
89730
89654
-
Asp
GTC
[ENA]
¡û
>W141168235
AXUS01000043
Bacillota
Clostridioides mangenotii TR [AXUS]
1865
1941
+
Asp
GTC
[ENA]
¡û
>W141168294
AXUS01000073
Bacillota
Clostridioides mangenotii TR [AXUS]
456
380
-
Asp
GTC
[ENA]
¡û
>WENV170784342
MCHG01000966
[MCHG] permafrost metagenome; enrichment culture inoculated with soil; incubated with H2/CO2 at 20 degrees celsius and
416
492
+
Asp
GTC
[ENA]
¢þ
>WENV170976583
MTKZ01009542
[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
969
893
-
Asp
GTC
[ENA]
¢þ
>C181011311
CP011848
Bacillota
Clostridioides difficile DSM 27640 [CP011848]
35922
35998
+
Asp
GTC
-
¡û
>C181111734
CP025044
Bacillota
Clostridioides difficile R0104a [CP025044]
4114926
4115002
+
Asp
GTC
-
¡û
>C181111915
CP025046
Bacillota
Clostridioides difficile W0022a [CP025046]
4134457
4134533
+
Asp
GTC
-
¡û
>C181135466
CP026593
Bacillota
Clostridioides difficile 12-00008 [CP026593]
35922
35998
+
Asp
GTC
-
¡û
>C181135736
CP026596
Bacillota
Clostridioides difficile 10-00071 [CP026596]
35922
35998
+
Asp
GTC
-
¡û
>C181136497
CP026613
Bacillota
Clostridioides difficile R1 [CP026613]
36170
36246
+
Asp
GTC
-
¡û
>C181136517
CP026613
Bacillota
Clostridioides difficile R1 [CP026613]
38001
38077
+
Asp
GTC
-
¡û
>C181136538
CP026613
Bacillota
Clostridioides difficile R1 [CP026613]
138365
138441
+
Asp
GTC
-
¡û
>C181136587
CP026614
Bacillota
Clostridioides difficile R2 [CP026614]
36170
36246
+
Asp
GTC
-
¡û
>C181136607
CP026614
Bacillota
Clostridioides difficile R2 [CP026614]
38001
38077
+
Asp
GTC
-
¡û
>C181136628
CP026614
Bacillota
Clostridioides difficile R2 [CP026614]
138365
138441
+
Asp
GTC
-
¡û
>C181136684
CP026615
Bacillota
Clostridioides difficile R3 [CP026615]
4058673
4058597
-
Asp
GTC
-
¡û
>C181136704
CP026615
Bacillota
Clostridioides difficile R3 [CP026615]
4056842
4056766
-
Asp
GTC
-
¡û
>C181136725
CP026615
Bacillota
Clostridioides difficile R3 [CP026615]
3956478
3956402
-
Asp
GTC
-
¡û
>C191009310
CP012309
Bacillota
Clostridioides difficile DSM 28668 [CP012309]
35998
36074
+
Asp
GTC
-
¡û
>C191009330
CP012309
Bacillota
Clostridioides difficile DSM 28668 [CP012309]
37830
37906
+
Asp
GTC
-
¡û
>C191016539
CP019857
Bacillota
Clostridioides difficile DSM 29745 [CP019857]
35996
36072
+
Asp
GTC
-
¡û
>C191016559
CP019857
Bacillota
Clostridioides difficile DSM 29745 [CP019857]
37828
37904
+
Asp
GTC
-
¡û
>C191016720
CP019860
Bacillota
Clostridioides difficile DSM 29632 [CP019860]
35962
36038
+
Asp
GTC
-
¡û
>W1930002421
BIWY01000300
Bacillota
Clostridioides difficile FD286 [BIWY]
1634
1558
-
Asp
GTC
[ENA]
¡û
>W1910155923
BINE01000009
Bacillota
Clostridioides difficile FD010 [BINE]
70
146
+
Asp
GTC
[ENA]
¡û
>W1910155955
BINE01000455
Bacillota
Clostridioides difficile FD010 [BINE]
1451
1375
-
Asp
GTC
[ENA]
¡û
>W1910156272
BINJ01000198
Bacillota
Clostridioides difficile FD015 [BINJ]
1981
1905
-
Asp
GTC
[ENA]
¡û
>W1910157554
BIOC01000393
Bacillota
Clostridioides difficile FD036 [BIOC]
400
324
-
Asp
GTC
[ENA]
¡û
>W1910157632
BIOD01000054
Bacillota
Clostridioides difficile FD037 [BIOD]
1459
1383
-
Asp
GTC
[ENA]
¡û
>W1910158095
BIOK01000082
Bacillota
Clostridioides difficile FD045 [BIOK]
715
791
+
Asp
GTC
[ENA]
¡û
>W1910158221
BIOM01000135
Bacillota
Clostridioides difficile FD047 [BIOM]
1131
1207
+
Asp
GTC
[ENA]
¡û
>W1910158322
BION01000145
Bacillota
Clostridioides difficile FD048 [BION]
266
190
-
Asp
GTC
[ENA]
¡û
>W1910158647
BIOT01000025
Bacillota
Clostridioides difficile FD054 [BIOT]
56211
56135
-
Asp
GTC
[ENA]
¡û
>W1910158706
BIOU01000107
Bacillota
Clostridioides difficile FD055 [BIOU]
2099
2023
-
Asp
GTC
[ENA]
¡û
>W1910158726
BIOU01000107
Bacillota
Clostridioides difficile FD055 [BIOU]
259
183
-
Asp
GTC
[ENA]
¡û
>W1910159016
BIOY01000142
Bacillota
Clostridioides difficile FD059 [BIOY]
1764
1840
+
Asp
GTC
[ENA]
¡û
>W1910159068
BIOZ01000047
Bacillota
Clostridioides difficile FD060 [BIOZ]
1690
1766
+
Asp
GTC
[ENA]
¡û
>W1910159215
BIPB01000121
Bacillota
Clostridioides difficile FD062 [BIPB]
19
95
+
Asp
GTC
[ENA]
¡û
>W1910159235
BIPB01000121
Bacillota
Clostridioides difficile FD062 [BIPB]
1859
1935
+
Asp
GTC
[ENA]
¡û
>W1910159409
BIPE01000039
Bacillota
Clostridioides difficile FD065 [BIPE]
75
151
+
Asp
GTC
[ENA]
¡û
>W1910159461
BIPE01000204
Bacillota
Clostridioides difficile FD065 [BIPE]
494
570
+
Asp
GTC
[ENA]
¡û
>W1910159837
BIPK01000045
Bacillota
Clostridioides difficile FD072 [BIPK]
30919
30843
-
Asp
GTC
[ENA]
¡û
>W1910159874
BIPK01000114
Bacillota
Clostridioides difficile FD072 [BIPK]
70
146
+
Asp
GTC
[ENA]
¡û
>W1910159894
BIPK01000114
Bacillota
Clostridioides difficile FD072 [BIPK]
1910
1986
+
Asp
GTC
[ENA]
¡û
>W1910159955
BIPL01000116
Bacillota
Clostridioides difficile FD073 [BIPL]
544
620
+
Asp
GTC
[ENA]
¡û
>W1910160020
BIPM01000098
Bacillota
Clostridioides difficile FD074 [BIPM]
1526
1450
-
Asp
GTC
[ENA]
¡û
>W1910160094
BIPN01000126
Bacillota
Clostridioides difficile FD075 [BIPN]
111
187
+
Asp
GTC
[ENA]
¡û
>W1910160459
BIPS01000143
Bacillota
Clostridioides difficile FD080 [BIPS]
1693
1769
+
Asp
GTC
[ENA]
¡û
>W1910163412
BIRK01000062
Bacillota
Clostridioides difficile FD128 [BIRK]
122
198
+
Asp
GTC
[ENA]
¡û
>W1910163434
BIRK01000102
Bacillota
Clostridioides difficile FD128 [BIRK]
243
319
+
Asp
GTC
[ENA]
¡û
>W1910163450
BIRK01000104
Bacillota
Clostridioides difficile FD128 [BIRK]
1494
1418
-
Asp
GTC
[ENA]
¡û
>W1910164031
BIRS01000127
Bacillota
Clostridioides difficile FD136 [BIRS]
529
605
+
Asp
GTC
[ENA]
¡û
>W1910164350
BIRX01000088
Bacillota
Clostridioides difficile FD141 [BIRX]
8136
8060
-
Asp
GTC
[ENA]
¡û
>W1910164939
BISF01000067
Bacillota
Clostridioides difficile FD149 [BISF]
2008
1932
-
Asp
GTC
[ENA]
¡û
>W1910165156
BISI01000173
Bacillota
Clostridioides difficile FD153 [BISI]
2034
1958
-
Asp
GTC
[ENA]
¡û
>W1910166711
BITE01000062
Bacillota
Clostridioides difficile FD184 [BITE]
185
261
+
Asp
GTC
[ENA]
¡û
>W1910166732
BITE01000121
Bacillota
Clostridioides difficile FD184 [BITE]
185
261
+
Asp
GTC
[ENA]
¡û
>W1910167486
BITP01000140
Bacillota
Clostridioides difficile FD195 [BITP]
179
255
+
Asp
GTC
[ENA]
¡û
>W1910167604
BITQ01000274
Bacillota
Clostridioides difficile FD196 [BITQ]
1458
1382
-
Asp
GTC
[ENA]
¡û
>W1910170359
BIVF01000143
Bacillota
Clostridioides difficile FD238 [BIVF]
7937
7861
-
Asp
GTC
[ENA]
¡û
>W1910170894
BIVM01000136
Bacillota
Clostridioides difficile FD246 [BIVM]
1418
1342
-
Asp
GTC
[ENA]
¡û
>W1910171178
BIVQ01000151
Bacillota
Clostridioides difficile FD252 [BIVQ]
939
863
-
Asp
GTC
[ENA]
¡û
>W1910171282
BIVS01000051
Bacillota
Clostridioides difficile FD254 [BIVS]
30922
30846
-
Asp
GTC
[ENA]
¡û
>W1910171319
BIVS01000151
Bacillota
Clostridioides difficile FD254 [BIVS]
42
118
+
Asp
GTC
[ENA]
¡û
>W1910171892
BIWB01000010
Bacillota
Clostridioides difficile FD263 [BIWB]
81
157
+
Asp
GTC
[ENA]
¡û
>W1910171944
BIWB01000346
Bacillota
Clostridioides difficile FD263 [BIWB]
2020
1944
-
Asp
GTC
[ENA]
¡û
>W1910171964
BIWB01000346
Bacillota
Clostridioides difficile FD263 [BIWB]
180
104
-
Asp
GTC
[ENA]
¡û
>W1910172715
BIWO01000173
Bacillota
Clostridioides difficile FD276 [BIWO]
820
896
+
Asp
GTC
[ENA]
¡û
>W1910173328
BIWX01000383
Bacillota
Clostridioides difficile FD285 [BIWX]
1418
1342
-
Asp
GTC
[ENA]
¡û
>W1910173778
BIXE01000063
Bacillota
Clostridioides difficile FD293 [BIXE]
1595
1671
+
Asp
GTC
[ENA]
¡û
>W1910174059
BIXI01000208
Bacillota
Clostridioides difficile FD297 [BIXI]
112
188
+
Asp
GTC
[ENA]
¡û
>W1910174968
BIXW01000034
Bacillota
Clostridioides difficile FD312 [BIXW]
35311
35387
+
Asp
GTC
[ENA]
¡û
>W1910214159
FMKP01000013
Bacillota
Clostridioides difficile [FMKP]
74489
74413
-
Asp
GTC
[ENA]
¡û
>W1910215440
FMLH01000026
Bacillota
Clostridioides difficile [FMLH]
905
981
+
Asp
GTC
[ENA]
¡û
>W1910378969
FULK01000012
Bacillota
Clostridioides difficile VRECD0133 [FULK]
919
995
+
Asp
GTC
[ENA]
¡û
>W1910379001
FULK01000013
Bacillota
Clostridioides difficile VRECD0133 [FULK]
601
677
+
Asp
GTC
[ENA]
¡û
>W1910379953
FULV01000016
Bacillota
Clostridioides difficile VRECD0163 [FULV]
57912
57836
-
Asp
GTC
[ENA]
¡û
>W1910381706
FUMO01000028
Bacillota
Clostridioides difficile VRECD0170 [FUMO]
348
272
-
Asp
GTC
[ENA]
¡û
>W1910382536
FUMY01000014
Bacillota
Clostridioides difficile VRECD0128 [FUMY]
53243
53167
-
Asp
GTC
[ENA]
¡û
>W1910382587
FUMY01000038
Bacillota
Clostridioides difficile VRECD0128 [FUMY]
1720
1644
-
Asp
GTC
[ENA]
¡û
>W1910382798
FUNB01000021
Bacillota
Clostridioides difficile VRECD0122 [FUNB]
69764
69688
-
Asp
GTC
[ENA]
¡û
>W1910384246
FUNS01000011
Bacillota
Clostridioides difficile VRECD0011 [FUNS]
55665
55589
-
Asp
GTC
[ENA]
¡û
>W1910385233
FUOD01000012
Bacillota
Clostridioides difficile VRECD0053 [FUOD]
55699
55623
-
Asp
GTC
[ENA]
¡û
>W1910387263
FUPB01000006
Bacillota
Clostridioides difficile VRECD0114 [FUPB]
986
1062
+
Asp
GTC
[ENA]
¡û
>W1910387597
FUPF01000008
Bacillota
Clostridioides difficile VRECD0143 [FUPF]
915
991
+
Asp
GTC
[ENA]
¡û
>W1910387605
FUPF01000008
Bacillota
Clostridioides difficile VRECD0143 [FUPF]
1718
1794
+
Asp
GTC
[ENA]
¡û
>W1910388643
FUPR01000012
Bacillota
Clostridioides difficile VRECD0156 [FUPR]
5431
5507
+
Asp
GTC
[ENA]
¡û
>W1910389351
FUPZ01000031
Bacillota
Clostridioides difficile VRECD0117 [FUPZ]
915
991
+
Asp
GTC
[ENA]
¡û
>W1910389412
FUQA01000015
Bacillota
Clostridioides difficile VRECD0153 [FUQA]
3460
3536
+
Asp
GTC
[ENA]
¡û
>W1910389692
FUQD01000042
Bacillota
Clostridioides difficile VRECD0158 [FUQD]
1488
1412
-
Asp
GTC
[ENA]
¡û
>W1910395760
FUSZ01000044
Bacillota
Clostridioides difficile CD67 [FUSZ]
945
1021
+
Asp
GTC
[ENA]
¡û
>W1910395770
FUSZ01000045
Bacillota
Clostridioides difficile CD67 [FUSZ]
693
617
-
Asp
GTC
[ENA]
¡û
>W1910397188
FUTT01000028
Bacillota
Clostridioides difficile CD64 [FUTT]
358
282
-
Asp
GTC
[ENA]
¡û
>W1910397320
FUTV01000043
Bacillota
Clostridioides difficile CD43 [FUTV]
1553
1629
+
Asp
GTC
[ENA]
¡û
>W1910397742
FUUB01000026
Bacillota
Clostridioides difficile CD36 [FUUB]
903
979
+
Asp
GTC
[ENA]
¡û
>W1910398777
FUUQ01000043
Bacillota
Clostridioides difficile CD08 [FUUQ]
168
92
-
Asp
GTC
[ENA]
¡û
>W1910398779
FUUQ01000044
Bacillota
Clostridioides difficile CD08 [FUUQ]
22
98
+
Asp
GTC
[ENA]
¡û
>W1910585006
JYGE01000001
Bacillota
Peptostreptococcus russellii RT-10B [JYGE]
417
493
+
Asp
GTC
[ENA]
¡û
>W1910585026
JYGE01000006
Bacillota
Peptostreptococcus russellii RT-10B [JYGE]
26832
26756
-
Asp
GTC
[ENA]
¡û
>W1910585045
JYGE01000006
Bacillota
Peptostreptococcus russellii RT-10B [JYGE]
25051
24975
-
Asp
GTC
[ENA]
¡û
>W1910618387
LJCK01000072
Bacillota
Clostridioides difficile LIBA5809 [LJCK]
903
979
+
Asp
GTC
[ENA]
¡û
>W1910768905
MOPC01000064
Bacillota
Clostridioides difficile 5486-Y/ST2 [MOPC]
358
282
-
Asp
GTC
[ENA]
¡û
>W1910769289
MOPG01000045
Bacillota
Clostridioides difficile 5490-CF/ST37 [MOPG]
182
106
-
Asp
GTC
[ENA]
¡û
>W1910769725
MOPL01000152
Bacillota
Clostridioides difficile 5495-AF/ST41 [MOPL]
131
207
+
Asp
GTC
[ENA]
¡û
>W1910770433
MOPT01000038
Bacillota
Clostridioides difficile 5537-D/ST9 [MOPT]
131
207
+
Asp
GTC
[ENA]
¡û
>W1910770879
MOPX01000169
Bacillota
Clostridioides difficile 5542-Y/ST2 [MOPX]
85
9
-
Asp
GTC
[ENA]
¡û
>W1910770881
MOPX01000205
Bacillota
Clostridioides difficile 5542-Y/ST2 [MOPX]
358
282
-
Asp
GTC
[ENA]
¡û
>W1910771351
MOQC01000048
Bacillota
Clostridioides difficile 5550-AH/ST67 [MOQC]
182
106
-
Asp
GTC
[ENA]
¡û
>W1910771356
MOQC01000050
Bacillota
Clostridioides difficile 5550-AH/ST67 [MOQC]
669
745
+
Asp
GTC
[ENA]
¡û
>W1910772068
MOQL01000259
Bacillota
Clostridioides difficile 5616-DH/ST42 [MOQL]
131
207
+
Asp
GTC
[ENA]
¡û
>W1910772551
MOQR01000032
Bacillota
Clostridioides difficile 6589-DH/ST42 [MOQR]
131
207
+
Asp
GTC
[ENA]
¡û
>W1910775085
MOTK01000018
Bacillota
Clostridioides difficile 6624-Y/ST13 [MOTK]
91648
91572
-
Asp
GTC
[ENA]
¡û
>W1910775108
MOTK01000020
Bacillota
Clostridioides difficile 6624-Y/ST13 [MOTK]
868
944
+
Asp
GTC
[ENA]
¡û
>W1910775118
MOTK01000027
Bacillota
Clostridioides difficile 6624-Y/ST13 [MOTK]
937
1013
+
Asp
GTC
[ENA]
¡û
>W1910775138
MOTK01000027
Bacillota
Clostridioides difficile 6624-Y/ST13 [MOTK]
2769
2845
+
Asp
GTC
[ENA]
¡û
>W1910775142
MOTK01000028
Bacillota
Clostridioides difficile 6624-Y/ST13 [MOTK]
618
694
+
Asp
GTC
[ENA]
¡û
>W1910775474
MOTO01000029
Bacillota
Clostridioides difficile 6630-DH/ST42 [MOTO]
131
207
+
Asp
GTC
[ENA]
¡û
>W1910778502
MPEW01000026
Bacillota
Clostridioides difficile 7456-DH/ST42 [MPEW]
358
282
-
Asp
GTC
[ENA]
¡û
>W1910778534
MPEW01000280
Bacillota
Clostridioides difficile 7456-DH/ST42 [MPEW]
1031
1107
+
Asp
GTC
[ENA]
¡û
>W1910779559
MPFI01000046
Bacillota
Clostridioides difficile 7476-Y/ST2 [MPFI]
131
207
+
Asp
GTC
[ENA]
¡û
>W1910780395
MPFS01000344
Bacillota
Clostridioides difficile 7496-D/ST9 [MPFS]
131
207
+
Asp
GTC
[ENA]
¡û
>W1910780816
MPFX01000207
Bacillota
Clostridioides difficile 7503-Y/ST2 [MPFX]
131
207
+
Asp
GTC
[ENA]
¡û
>W1910781017
MPFZ01000590
Bacillota
Clostridioides difficile 6631-DH/ST42 [MPFZ]
131
207
+
Asp
GTC
[ENA]
¡û
>W1910781320
MPGD01000036
Bacillota
Clostridioides difficile 7486-A/ST43 [MPGD]
863
939
+
Asp
GTC
[ENA]
¡û
>W1910781511
MPGF01000027
Bacillota
Clostridioides difficile 7462-DH/ST42 [MPGF]
131
207
+
Asp
GTC
[ENA]
¡û
>W1910783257
MPJQ01000025
Bacillota
Clostridioides difficile 6617-A/ST43 [MPJQ]
131
207
+
Asp
GTC
[ENA]
¡û
>W1910871884
NCXL01000031
Bacillota
Clostridioides difficile LC693 [NCXL]
49030
48954
-
Asp
GTC
[ENA]
¡û
>W1910871925
NCXL01000110
Bacillota
Clostridioides difficile LC693 [NCXL]
15
91
+
Asp
GTC
[ENA]
¡û
>W1911517712
OEZY01000024
Bacillota
Clostridioides difficile WA151 [OEZY]
163
239
+
Asp
GTC
[ENA]
¡û
>W1810721069
QNRS01000001
Bacillota
Garciella nitratireducens GHB3 [QNRS]
205623
205547
-
Asp
GTC
[ENA]
¡û
>W1810723110
QNWA01000023
Bacillota
Clostridioides difficile GZ14 [QNWA]
51265
51189
-
Asp
GTC
[ENA]
¡û
>W1810723146
QNWA01000047
Bacillota
Clostridioides difficile GZ14 [QNWA]
35
111
+
Asp
GTC
[ENA]
¡û
>W1810723883
QNWN01000026
Bacillota
Clostridioides difficile 6 [QNWN]
51265
51189
-
Asp
GTC
[ENA]
¡û
>W1810723919
QNWN01000050
Bacillota
Clostridioides difficile 6 [QNWN]
35
111
+
Asp
GTC
[ENA]
¡û
>W1810724423
QNWV01000054
Bacillota
Clostridioides difficile ZR58 [QNWV]
15
91
+
Asp
GTC
[ENA]
¡û
>W1810724432
QNWV01000058
Bacillota
Clostridioides difficile ZR58 [QNWV]
573
497
-
Asp
GTC
[ENA]
¡û
>W10119212
ADVM01000096
Bacillota
Clostridioides difficile NAP07 [ADVM]
166
242
+
Asp
GTC
[ENA]
¡û
>C10102879
FN665654
Bacillota
Clostridioides difficile 2007855 [FN665654]
30453
30529
+
Asp
GTC
[Ensembl]
¡û
>C10103021
FN538970
Bacillota
Clostridioides difficile CD196 [FN538970]
30629
30705
+
Asp
GTC
[Ensembl]
¡û
>W11125432
ADVM01000096
Bacillota
Clostridioides difficile NAP07 [ADVM]
166
242
+
Asp
GTC
[ENA]
¡û
>W1610129836
CZZJ01000162
Bacillota
Clostridioides difficile [CZZJ]
431
355
-
Asp
GTC
[ENA]
¡û
>W1610129854
CZZJ01000195
Bacillota
Clostridioides difficile [CZZJ]
139
63
-
Asp
GTC
[ENA]
¡û
>W1610135099
FABW01000383
Bacillota
Clostridioides difficile [FABW]
530
454
-
Asp
GTC
[ENA]
¡û
>W1610135132
FABW01000459
Bacillota
Clostridioides difficile [FABW]
139
63
-
Asp
GTC
[ENA]
¡û
>W1610144381
FAGA01000357
Bacillota
Clostridioides difficile [FAGA]
79
3
-
Asp
GTC
[ENA]
¡û
>W1610147356
FAHL01000074
Bacillota
Clostridioides difficile [FAHL]
1829
1753
-
Asp
GTC
[ENA]
¡û
>W1610147373
FAHL01000085
Bacillota
Clostridioides difficile [FAHL]
527
451
-
Asp
GTC
[ENA]
¡û
>W1610148415
FAHY01000346
Bacillota
Clostridioides difficile [FAHY]
528
452
-
Asp
GTC
[ENA]
¡û
>W1610148420
FAHY01000354
Bacillota
Clostridioides difficile [FAHY]
435
359
-
Asp
GTC
[ENA]
¡û
>W1610148436
FAHY01000381
Bacillota
Clostridioides difficile [FAHY]
261
185
-
Asp
GTC
[ENA]
¡û
>W1610148683
FAIB01000151
Bacillota
Clostridioides difficile [FAIB]
694
618
-
Asp
GTC
[ENA]
¡û
>W1610148698
FAIB01000160
Bacillota
Clostridioides difficile [FAIB]
527
451
-
Asp
GTC
[ENA]
¡û
>W1610148703
FAIB01000169
Bacillota
Clostridioides difficile [FAIB]
433
357
-
Asp
GTC
[ENA]
¡û
>W1610148708
FAIB01000174
Bacillota
Clostridioides difficile [FAIB]
260
184
-
Asp
GTC
[ENA]
¡û
>W1610148716
FAIB01000187
Bacillota
Clostridioides difficile [FAIB]
260
184
-
Asp
GTC
[ENA]
¡û
>W1610148848
FAID01000120
Bacillota
Clostridioides difficile [FAID]
79
3
-
Asp
GTC
[ENA]
¡û
>W1610151961
FAJN01000108
Bacillota
Clostridioides difficile [FAJN]
528
452
-
Asp
GTC
[ENA]
¡û
>W1610151966
FAJN01000115
Bacillota
Clostridioides difficile [FAJN]
71
147
+
Asp
GTC
[ENA]
¡û
>W1610154802
FAKU01000139
Bacillota
Clostridioides difficile [FAKU]
431
355
-
Asp
GTC
[ENA]
¡û
>W1610154819
FAKU01000164
Bacillota
Clostridioides difficile [FAKU]
139
63
-
Asp
GTC
[ENA]
¡û
>W1610157332
FALX01000075
Bacillota
Clostridioides difficile [FALX]
17252
17176
-
Asp
GTC
[ENA]
¡û
>W1610157341
FALX01000281
Bacillota
Clostridioides difficile [FALX]
140
216
+
Asp
GTC
[ENA]
¡û
>W1610157366
FALX01000349
Bacillota
Clostridioides difficile [FALX]
527
451
-
Asp
GTC
[ENA]
¡û
>W1610160655
FANI01000172
Bacillota
Clostridioides difficile [FANI]
816
740
-
Asp
GTC
[ENA]
¡û
>W1610160664
FANI01000179
Bacillota
Clostridioides difficile [FANI]
723
647
-
Asp
GTC
[ENA]
¡û
>W1610160672
FANI01000181
Bacillota
Clostridioides difficile [FANI]
695
619
-
Asp
GTC
[ENA]
¡û
>W1710131503
CZZJ01000162
Bacillota
Clostridioides difficile [CZZJ]
431
355
-
Asp
GTC
[ENA]
¡û
>W1710131521
CZZJ01000195
Bacillota
Clostridioides difficile [CZZJ]
139
63
-
Asp
GTC
[ENA]
¡û
>W1710136766
FABW01000383
Bacillota
Clostridioides difficile [FABW]
530
454
-
Asp
GTC
[ENA]
¡û
>W1710136799
FABW01000459
Bacillota
Clostridioides difficile [FABW]
139
63
-
Asp
GTC
[ENA]
¡û
>W1710146048
FAGA01000357
Bacillota
Clostridioides difficile [FAGA]
79
3
-
Asp
GTC
[ENA]
¡û
>W1710149023
FAHL01000074
Bacillota
Clostridioides difficile [FAHL]
1829
1753
-
Asp
GTC
[ENA]
¡û
>W1710149040
FAHL01000085
Bacillota
Clostridioides difficile [FAHL]
527
451
-
Asp
GTC
[ENA]
¡û
>W1710150082
FAHY01000346
Bacillota
Clostridioides difficile [FAHY]
528
452
-
Asp
GTC
[ENA]
¡û
>W1710150087
FAHY01000354
Bacillota
Clostridioides difficile [FAHY]
435
359
-
Asp
GTC
[ENA]
¡û
>W1710150103
FAHY01000381
Bacillota
Clostridioides difficile [FAHY]
261
185
-
Asp
GTC
[ENA]
¡û
>W1710150350
FAIB01000151
Bacillota
Clostridioides difficile [FAIB]
694
618
-
Asp
GTC
[ENA]
¡û
>W1710150365
FAIB01000160
Bacillota
Clostridioides difficile [FAIB]
527
451
-
Asp
GTC
[ENA]
¡û
>W1710150370
FAIB01000169
Bacillota
Clostridioides difficile [FAIB]
433
357
-
Asp
GTC
[ENA]
¡û
>W1710150375
FAIB01000174
Bacillota
Clostridioides difficile [FAIB]
260
184
-
Asp
GTC
[ENA]
¡û
>W1710150383
FAIB01000187
Bacillota
Clostridioides difficile [FAIB]
260
184
-
Asp
GTC
[ENA]
¡û
>W1710150515
FAID01000120
Bacillota
Clostridioides difficile [FAID]
79
3
-
Asp
GTC
[ENA]
¡û
>W1710153628
FAJN01000108
Bacillota
Clostridioides difficile [FAJN]
528
452
-
Asp
GTC
[ENA]
¡û
>W1710153633
FAJN01000115
Bacillota
Clostridioides difficile [FAJN]
71
147
+
Asp
GTC
[ENA]
¡û
>W1710156469
FAKU01000139
Bacillota
Clostridioides difficile [FAKU]
431
355
-
Asp
GTC
[ENA]
¡û
>W1710156486
FAKU01000164
Bacillota
Clostridioides difficile [FAKU]
139
63
-
Asp
GTC
[ENA]
¡û
>W1710158999
FALX01000075
Bacillota
Clostridioides difficile [FALX]
17252
17176
-
Asp
GTC
[ENA]
¡û
>W1710159008
FALX01000281
Bacillota
Clostridioides difficile [FALX]
140
216
+
Asp
GTC
[ENA]
¡û
>W1710159033
FALX01000349
Bacillota
Clostridioides difficile [FALX]
527
451
-
Asp
GTC
[ENA]
¡û
>W1710162322
FANI01000172
Bacillota
Clostridioides difficile [FANI]
816
740
-
Asp
GTC
[ENA]
¡û
>W1710162331
FANI01000179
Bacillota
Clostridioides difficile [FANI]
723
647
-
Asp
GTC
[ENA]
¡û
>W1710162339
FANI01000181
Bacillota
Clostridioides difficile [FANI]
695
619
-
Asp
GTC
[ENA]
¡û
>W1710566313
FORW01000003
Bacillota
Terrisporobacter glycolicus [FORW]
286632
286556
-
Asp
GTC
[ENA]
¡û
>W1710600848
FUWV01000004
Bacillota
Garciella nitratireducens DSM 15102 [FUWV]
83790
83714
-
Asp
GTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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