tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.167468 (104 seq.)
>W1710821645 LKTU01000034 Betaproteobacteria Variovorax paradoxus [LKTU] 15953 16029 + Met CAT [ENA] ¡û
>W1710821688 LKTV01000039 Betaproteobacteria Variovorax paradoxus [LKTV] 15953 16029 + Met CAT [ENA] ¡û
>W1710821749 LKTW01000112 Betaproteobacteria Variovorax paradoxus [LKTW] 16380 16304 - Met CAT [ENA] ¡û
>W1710821789 LKTX01000028 Betaproteobacteria Variovorax paradoxus [LKTX] 16876 16952 + Met CAT [ENA] ¡û
>W1710860134 LMCQ01000019 Betaproteobacteria Variovorax sp. Root318D1 [LMCQ] 185656 185732 + Met CAT [ENA] ¡û
>W1710861752 LMDW01000004 Betaproteobacteria Variovorax sp. Root411 [LMDW] 15916 15992 + Met CAT [ENA] ¡û
>W1710862493 LMEK01000022 Betaproteobacteria Variovorax sp. Root434 [LMEK] 53261 53185 - Met CAT [ENA] ¡û
>W1710863068 LMEV01000003 Betaproteobacteria Variovorax sp. Root473 [LMEV] 46559 46483 - Met CAT [ENA] ¡û
>W1711250085 LYMK01000015 Betaproteobacteria Variovorax sp. JS1663 [LYMK] 98741 98665 - Met CAT [ENA] ¡û
>W131174616 ARIP01000036 Betaproteobacteria Variovorax paradoxus 4MFCol3.1 [ARIP] 1152 1228 + Met CAT [ENA] ¡û
>W131180328 ARNA01000040 Betaproteobacteria Variovorax paradoxus 110B [ARNA] 16119 16195 + Met CAT [ENA] ¡û
>WENV180026848 FTIU01289700 [FTIU] metagenome; soil 115 39 - Ile2 CAT [ENA] ¡û
>W141170372 AXXS01000036 Betaproteobacteria Variovorax sp. JGI 0001013-M04 [AXXS] 6766 6842 + Met CAT [ENA] ¡û
>WENV183741621 PJUG01000213 [PJUG] feces metagenome; Chicken feces (2) enriched on wood chips: beechwood xylan treatment 3958 3882 - Ile2 CAT [ENA] ¡û
>WENV183742112 PJUH01000315 [PJUH] feces metagenome; Chicken feces (2) enriched on wood chips: alkali lignin treatment 3958 3882 - Ile2 CAT [ENA] ¡û
>WENV170559453 CXWL01124157 [CXWL] groundwater metagenome; biofilm material 4455 4531 + Met CAT [ENA] ¡û
>WENV170707832 LNAP01035899 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 23 99 + Met CAT [ENA] ¡û
>WENV170708499 LNAP01088218 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 751 675 - Met CAT [ENA] ¡û
>WENV171003333 NNBT01005057 [NNBT] plant metagenome; symbiotic tissue sample KVJ10 1498 1574 + Met CAT [ENA] ¡û
>WENV171003594 NNBU01000667 [NNBU] plant metagenome; symbiotic tissue sample KVJ2 9854 9930 + Met CAT [ENA] ¡û
>WENV171003706 NNBV01000461 [NNBV] plant metagenome; symbiotic tissue sample KVS11 18182 18258 + Met CAT [ENA] ¡û
>W09119959 ACEE01000055 Betaproteobacteria Variovorax paradoxus S110 [ACEE] 20765 20689 - Met CAT [ENA] ¡û
>C141002560 CP003911 Betaproteobacteria Variovorax paradoxus B4 [CP003911, CP003912] 4752671 4752595 - Met CAT [Ensembl] ¡û
>W1910792834 MRCN01000012 Betaproteobacteria Variovorax boronicumulans ACN3 [MRCN] 37575 37651 + Met CAT [ENA] ¡û
>C09111113 CP001635 Betaproteobacteria Variovorax paradoxus [CP001635] 4579967 4579891 - Met CAT [Ensembl] ¡û
>W1911496675 OCMW01000001 Betaproteobacteria Variovorax sp. YR752 [OCMW] 1527458 1527534 + Met CAT [ENA] ¡û
>W1911647349 QAJK01000065 Betaproteobacteria Variovorax sp. KBW07 [QAJK] 77526 77450 - Met CAT [ENA] ¡û
>W1911775319 QXMN01000023 Betaproteobacteria Acidovorax cavernicola 1011MAR4D40.2 [QXMN] 91221 91145 - Met CAT [ENA] ¡û
>W1810192698 PKMT01000001 Betaproteobacteria Variovorax sp. RO1 [PKMT] 634602 634678 + Met CAT [ENA] ¡û
>W1810486684 QAYA01000026 Betaproteobacteria Variovorax sp. GV040 [QAYA] 23343 23419 + Met CAT [ENA] ¡û
>W1810577526 QEOH01000004 Betaproteobacteria Variovorax sp. GV014 [QEOH] 210909 210833 - Met CAT [ENA] ¡û
>W1810672555 QJTM01000024 Betaproteobacteria Variovorax sp. GV035 [QJTM] 23343 23419 + Met CAT [ENA] ¡û
>W1810676123 QKLT01000027 Betaproteobacteria Variovorax sp. GV042 [QKLT] 23343 23419 + Met CAT [ENA] ¡û
>W1810682493 QKUE01000024 Betaproteobacteria Variovorax sp. GV004 [QKUE] 27463 27387 - Met CAT [ENA] ¡û
>W2010609300 JABMJH010000003 Betaproteobacteria Variovorax sp. SG533 [JABMJH] 288515 288591 + Ile2 CAT [ENA] ¡û
>W2010717550 JACHYD010000005 Betaproteobacteria Variovorax sp. Sphag1J [JACHYD] 102751 102675 - Ile2 CAT [ENA] ¡û
>W2010721699 JACIBG010000012 Betaproteobacteria Variovorax sp. BK613 [JACIBG] 118720 118644 - Ile2 CAT [ENA] ¡û
>W2010727662 JACIFZ010000005 Betaproteobacteria Variovorax guangxiensis 34/80 [JACIFZ] 11934 11858 - Ile2 CAT [ENA] ¡û
>W2010901296 MRCN01000012 Betaproteobacteria Variovorax boronicumulans ACN3 [MRCN] 37575 37651 + Ile2 CAT [ENA] ¡û
>W2011157579 OCMW01000001 Betaproteobacteria Variovorax sp. YR752 [OCMW] 1527458 1527534 + Ile2 CAT [ENA] ¡û
>W2011235333 QAJK01000065 Betaproteobacteria Variovorax sp. KBW07 [QAJK] 77526 77450 - Ile2 CAT [ENA] ¡û
>W2011328876 QXMN01000023 Betaproteobacteria Acidovorax cavernicola 1011MAR4D40.2 [QXMN] 91221 91145 - Ile2 CAT [ENA] ¡û
>W2011407890 RCZI01000005 Betaproteobacteria Variovorax guangxiensis S06.C [RCZI] 217574 217650 + Ile2 CAT [ENA] ¡û
>W2011407930 RCZJ01000005 Betaproteobacteria Variovorax ginsengisoli S09.D [RCZJ] 217574 217650 + Ile2 CAT [ENA] ¡û
>W2011482847 RQXU01000012 Betaproteobacteria Variovorax sp. T529 [RQXU] 14981 14905 - Ile2 CAT [ENA] ¡û
>W2011494442 RWKH01000007 Betaproteobacteria Variovorax sp. DXTD-1 [RWKH] 79631 79555 - Ile2 CAT [ENA] ¡û
>W2011494500 RWKI01000010 Betaproteobacteria Variovorax sp. MHTC-1 [RWKI] 81267 81343 + Ile2 CAT [ENA] ¡û
>W2011495747 RXFQ01000017 Betaproteobacteria Variovorax sp. 502 [RXFQ] 45153 45229 + Ile2 CAT [ENA] ¡û
>W2011495787 RXFR01000005 Betaproteobacteria Variovorax sp. 553 [RXFR] 96978 96902 - Ile2 CAT [ENA] ¡û
>W2011495836 RXFS01000005 Betaproteobacteria Variovorax sp. 679 [RXFS] 431318 431394 + Ile2 CAT [ENA] ¡û
>W2011498469 RXOE01000003 Betaproteobacteria Variovorax gossypii DSM 100435 [RXOE] 316832 316908 + Ile2 CAT [ENA] ¡û
>W2011624494 SLYJ01000024 Betaproteobacteria Variovorax sp. GV051 [SLYJ] 23343 23419 + Ile2 CAT [ENA] ¡û
>W2011625452 SLYZ01000003 Betaproteobacteria Variovorax sp. GV008 [SLYZ] 210714 210638 - Ile2 CAT [ENA] ¡û
>W2011971339 VCCD02000002 Betaproteobacteria Variovorax sp. KBS0712 [VCCD] 578876 578800 - Ile2 CAT [ENA] ¡û
>W2012046904 VIVL01000001 Betaproteobacteria Variovorax sp. T529 [VIVL] 1212388 1212464 + Ile2 CAT [ENA] ¡û
>W2110079468 CAIGKF010000022 Betaproteobacteria Variovorax paradoxus [CAIGKF] 51703 51627 - Ile2 CAT [ENA] ¡û
>W2110134424 JAAAFX010000004 Betaproteobacteria Variovorax boronicumulans Xaverov 112 [JAAAFX] 2336104 2336180 + Ile2 CAT [ENA] ¡û
>W2110268649 JACVBS010000001 Betaproteobacteria Variovorax sp. VRV01 [JACVBS] 332869 332945 + Ile2 CAT [ENA] ¡û
>W2110408623 JAEFCB010000002 Betaproteobacteria Variovorax sp. IB41 [JAEFCB] 88991 89067 + Ile2 CAT [ENA] ¡û
>W2110457183 JAEVYQ010000624 Betaproteobacteria Variovorax paradoxus BFB1_13 [JAEVYQ] 5627 5703 + Ile2 CAT [ENA] ¡û
>W2110541742 JAGGNV010000048 Betaproteobacteria Variovorax paradoxus ISL-79 [JAGGNV] 61219 61295 + Ile2 CAT [ENA] ¡û
>W2110541795 JAGGNW010000026 Betaproteobacteria Variovorax paradoxus ISL-81 [JAGGNW] 13913 13837 - Ile2 CAT [ENA] ¡û
>C201306941 LR594659 Betaproteobacteria Variovorax sp. PBL-H6 [LR594659] 4894741 4894665 - Ile2 CAT - ¡û
>C211067341 CP046508 Betaproteobacteria Variovorax sp. RKNM96 [CP046508] 5849861 5849785 - Ile2 CAT - ¡û
>C211132304 CP060295 Betaproteobacteria Variovorax sp. PAMC26660 [CP060295] 1306739 1306663 - Ile2 CAT - ¡û
>C211132353 CP060296 Betaproteobacteria Variovorax sp. PAMC28562 [CP060296] 247499 247423 - Ile2 CAT - ¡û
>C211172915 CP063166 Betaproteobacteria Variovorax paradoxus VAI-C [CP063166] 5641723 5641647 - Ile2 CAT - ¡û
>W2110748887 MOWM01000044 Betaproteobacteria Variovorax sp. E3 [MOWM] 47673 47749 + Ile2 CAT [ENA] ¡û
>C231461160 CP102931 Betaproteobacteria Variovorax paradoxus JBCE486 [CP102931] 846869 846945 + Ile2 CAT - ¡û
>C241111939 CP046622 Betaproteobacteria Variovorax paradoxus CSUSB [CP046622] 4685949 4685873 - Ile2 CAT - ¡û
>C241251414 CP123990 Betaproteobacteria Variovorax paradoxus MGMM5 [CP123990] 2659799 2659875 + Ile2 CAT - ¡û
>C241342626 CP138513 Betaproteobacteria Variovorax paradoxus SPNA7 [CP138513] 4878603 4878527 - Ile2 CAT - ¡û
>C241342670 CP138515 Betaproteobacteria Variovorax paradoxus 2u118 [CP138515] 4663861 4663785 - Ile2 CAT - ¡û
>W1511352959 JROV01000272 Betaproteobacteria Variovorax paradoxus ZNC0006 [JROV] 334 258 - Met CAT [ENA] ¡û
>C11123590 CP002417 Betaproteobacteria Variovorax paradoxus EPS [CP002417] 5431476 5431400 - Met CAT [Ensembl] ¡û
>W1511508955 JXQQ01000136 Betaproteobacteria Variovorax paradoxus MEDvA23 [JXQQ] 13453 13377 - Met CAT [ENA] ¡û
>W1511555012 JZWI01000030 Betaproteobacteria Variovorax paradoxus TBEA6 [JZWI] 4674 4750 + Met CAT [ENA] ¡û
>C161073165 CP014517 Betaproteobacteria Variovorax sp. PAMC 28711 [CP014517] 2928576 2928652 + Met CAT [Ensembl] ¡û
>W1610072214 BCUT01000005 Betaproteobacteria Variovorax paradoxus NBRC 15149 [BCUT] 275215 275291 + Met CAT [ENA] ¡û
>W1610072239 BCUU01000003 Betaproteobacteria Variovorax soli NBRC 106424 [BCUU] 95777 95701 - Met CAT [ENA] ¡û
>W121084970 AKIW01000064 Betaproteobacteria Variovorax sp. CF313 [AKIW] 15763 15687 - Met CAT [ENA] ¡û
>W1610685650 LKTV01000039 Betaproteobacteria Variovorax paradoxus [LKTV] 15953 16029 + Met CAT [ENA] ¡û
>W1610685711 LKTW01000112 Betaproteobacteria Variovorax paradoxus [LKTW] 16380 16304 - Met CAT [ENA] ¡û
>W1610722480 LMCQ01000019 Betaproteobacteria Variovorax sp. Root318D1 [LMCQ] 185656 185732 + Met CAT [ENA] ¡û
>W1610724098 LMDW01000004 Betaproteobacteria Variovorax sp. Root411 [LMDW] 15916 15992 + Met CAT [ENA] ¡û
>W1610724839 LMEK01000022 Betaproteobacteria Variovorax sp. Root434 [LMEK] 53261 53185 - Met CAT [ENA] ¡û
>W1610725414 LMEV01000003 Betaproteobacteria Variovorax sp. Root473 [LMEV] 46559 46483 - Met CAT [ENA] ¡û
>W1710069416 BCUT01000005 Betaproteobacteria Variovorax paradoxus NBRC 15149 [BCUT] 275215 275291 + Met CAT [ENA] ¡û
>W1710069441 BCUU01000003 Betaproteobacteria Variovorax soli NBRC 106424 [BCUU] 95777 95701 - Met CAT [ENA] ¡û
>W1710506177 FMUJ01000002 Betaproteobacteria Variovorax sp. EL159 [FMUJ] 6654 6730 + Met CAT [ENA] ¡û
>W1710512952 FMZU01000015 Betaproteobacteria Variovorax sp. CF079 [FMZU] 139906 139830 - Met CAT [ENA] ¡û
>W1710517943 FNDR01000004 Betaproteobacteria Variovorax sp. OV700 [FNDR] 134367 134291 - Met CAT [ENA] ¡û
>W1710530055 FNOL01000035 Betaproteobacteria Variovorax sp. YR634 [FNOL] 33840 33764 - Met CAT [ENA] ¡û
>W1710531384 FNPM01000017 Betaproteobacteria Variovorax sp. YR266 [FNPM] 18512 18588 + Met CAT [ENA] ¡û
>W1710534029 FNRO01000003 Betaproteobacteria Variovorax sp. YR216 [FNRO] 606159 606235 + Met CAT [ENA] ¡û
>W1710538182 FNUI01000031 Betaproteobacteria Variovorax sp. NFACC28 [FNUI] 15990 15914 - Met CAT [ENA] ¡û
>W1710542729 FNZJ01000013 Betaproteobacteria Variovorax sp. OK202 [FNZJ] 185167 185091 - Met CAT [ENA] ¡û
>W1710545322 FOBJ01000027 Betaproteobacteria Variovorax sp. YR750 [FOBJ] 15791 15867 + Met CAT [ENA] ¡û
>W1710554314 FOII01000025 Betaproteobacteria Variovorax sp. OV084 [FOII] 15978 16054 + Met CAT [ENA] ¡û
>W1710558170 FOLP01000013 Betaproteobacteria Variovorax sp. OK212 [FOLP] 185167 185091 - Met CAT [ENA] ¡û
>W1710562290 FOOV01000045 Betaproteobacteria Variovorax sp. NFACC27 [FOOV] 16175 16099 - Met CAT [ENA] ¡û
>W1710571845 FOWG01000001 Betaproteobacteria Variovorax sp. PDC80 [FOWG] 1195323 1195247 - Met CAT [ENA] ¡û
>W1710572137 FOWL01000016 Betaproteobacteria Variovorax sp. OK605 [FOWL] 142695 142771 + Met CAT [ENA] ¡û
>W1710573298 FOXJ01000004 Betaproteobacteria Variovorax sp. 770b2 [FOXJ] 185439 185515 + Met CAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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