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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.167755 (187 seq.)
>W1710785300
LJHT01000002
Betaproteobacteria
beta proteobacterium AAP51 [LJHT]
11671
11595
-
Gln
TTG
[ENA]
¡û
>W1710785633
LJIA01000007
Betaproteobacteria
beta proteobacterium AAP99 [LJIA]
208100
208024
-
Gln
TTG
[ENA]
¡û
>W1710860014
LMCN01000040
Betaproteobacteria
Rhizobacter sp. Root29 [LMCN]
17286
17362
+
Gln
TTG
[ENA]
¡û
>W1710861260
LMDM01000003
Betaproteobacteria
Rhizobacter sp. Root1238 [LMDM]
59099
59023
-
Gln
TTG
[ENA]
¡û
>W1710861556
LMDS01000004
Betaproteobacteria
Rhizobacter sp. Root404 [LMDS]
1489325
1489401
+
Gln
TTG
[ENA]
¡û
>W1710861858
LMDY01000012
Betaproteobacteria
Methylibium sp. Root1272 [LMDY]
76153
76229
+
Gln
TTG
[ENA]
¡û
>W1710866428
LMHL01000016
Betaproteobacteria
Rhizobacter sp. Root16D2 [LMHL]
57932
57856
-
Gln
TTG
[ENA]
¡û
>W1710893616
LNEY01000010
Betaproteobacteria
Burkholderiales bacterium Ga0077547 [LNEY]
20020
20096
+
Gln
TTG
[ENA]
¡û
>W1710944145
LOQE01000042
Betaproteobacteria
Tepidimonas taiwanensis [LOQE]
23589
23665
+
Gln
TTG
[ENA]
¡û
>W1711259920
LYVQ01000145
Betaproteobacteria
Pelomonas sp. KK5 [LYVQ]
5278
5202
-
Gln
TTG
[ENA]
¡û
>W1711268824
LZDH01000065
Betaproteobacteria
Tepidimonas fonticaldi [LZDH]
248213
248289
+
Gln
TTG
[ENA]
¡û
>W131178102
ARLH01000089
Betaproteobacteria
Caldimonas manganoxidans ATCC BAA-369 [ARLH]
121541
121465
-
Gln
TTG
[ENA]
¡û
>W1712103025
NIOG01000004
Betaproteobacteria
Roseateles terrae [NIOG]
442893
442817
-
Gln
TTG
[ENA]
¡û
>W1712105735
NISI01000007
Betaproteobacteria
Roseateles puraquae [NISI]
319535
319459
-
Gln
TTG
[ENA]
¡û
>C171065570
CP017668
Betaproteobacteria
Jeongeupia sp. USM3 [CP017668]
2683265
2683341
+
Gln
TTG
-
¡û
>W131214618
ATUI01000010
Betaproteobacteria
Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 [ATUI]
152018
151942
-
Gln
TTG
[ENA]
¡û
>W131171869
ARGN01000045
Betaproteobacteria
Chitiniphilus shinanonensis DSM 23277 [ARGN]
23535
23611
+
Gln
TTG
[ENA]
¡û
>W131220441
ATZJ01000015
Betaproteobacteria
Chitinilyticum litopenaei DSM 21440 [ATZJ]
2174
2098
-
Gln
TTG
[ENA]
¡û
>WENV180015706
FSSZ01000123
[FSSZ] metagenome; soil
887
811
-
Gln
TTG
[ENA]
¡û
>WENV180016790
FSVW01002247
[FSVW] metagenome; soil
902
826
-
Gln
TTG
[ENA]
¡û
>WENV180025982
FTIR01001432
[FTIR] metagenome; soil
11063
11139
+
Gln
TTG
[ENA]
¡û
>WENV180033920
FTKM01000903
[FTKM] metagenome; soil
1991
1915
-
Gln
TTG
[ENA]
¡û
>WENV180267187
OBEQ011824957
[OBEQ] groundwater metagenome; groundwater
313
389
+
Gln
TTG
[ENA]
¡û
>WENV180284525
OBID01052084
[OBID] metagenome; sludge
421
497
+
Gln
TTG
[ENA]
¡û
>WENV180354908
OBNE01031667
[OBNE] groundwater metagenome; groundwater
64
140
+
Gln
TTG
[ENA]
¡û
>WENV180692712
OCZS010716062
[OCZS] soil metagenome; soil
105
181
+
Gln
TTG
[ENA]
¡û
>WENV180731549
ODGW01002025
[ODGW] human metagenome; G_DNA_Supragingival plaque
1692
1768
+
Gln
TTG
[ENA]
¡û
>WENV180751771
ODHS01153338
[ODHS] human metagenome; G_DNA_Supragingival plaque
242
166
-
Gln
TTG
[ENA]
¡û
>WENV180814805
ODJO01057378
[ODJO] human metagenome; G_DNA_Supragingival plaque
29
105
+
Gln
TTG
[ENA]
¡û
>WENV180833555
ODKC01095046
[ODKC] human metagenome; G_DNA_Supragingival plaque
218
142
-
Gln
TTG
[ENA]
¡û
>WENV180835441
ODKE01003402
[ODKE] human metagenome; G_DNA_Supragingival plaque
1316
1240
-
Gln
TTG
[ENA]
¡û
>WENV180934091
ODTR01022030
[ODTR] human metagenome; G_DNA_Supragingival plaque
211
135
-
Gln
TTG
[ENA]
¡û
>WENV180938607
ODTX01004070
[ODTX] human metagenome; G_DNA_Supragingival plaque
1313
1237
-
Gln
TTG
[ENA]
¡û
>WENV180981620
ODVE01037577
[ODVE] human metagenome; G_DNA_Supragingival plaque
884
808
-
Gln
TTG
[ENA]
¡û
>WENV180983466
ODVF01013722
[ODVF] human metagenome; G_DNA_Supragingival plaque
692
768
+
Gln
TTG
[ENA]
¡û
>WENV181049596
ODYD01000901
[ODYD] human metagenome; G_DNA_Supragingival plaque
9329
9253
-
Gln
TTG
[ENA]
¡û
>WENV181070316
OEAE01000767
[OEAE] human metagenome; G_DNA_Supragingival plaque
4529
4453
-
Gln
TTG
[ENA]
¡û
>WENV181081800
OEAS01389294
[OEAS] human metagenome; G_DNA_Supragingival plaque
168
92
-
Gln
TTG
[ENA]
¡û
>WENV181138159
OEGJ01139442
[OEGJ] human metagenome; G_DNA_Supragingival plaque
226
150
-
Gln
TTG
[ENA]
¡û
>WENV181166465
OEIU01000356
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
26396
26472
+
Gln
TTG
[ENA]
¡û
>WENV181171331
OEIV010199912
[OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
129
205
+
Gln
TTG
[ENA]
¡û
>WENV181223033
OFDC01001326
[OFDC] hot springs metagenome; Water
3931
3855
-
Gln
TTG
[ENA]
¡û
>WENV181227622
OFDN01023530
[OFDN] hot springs metagenome; Water
1576
1500
-
Gln
TTG
[ENA]
¡û
>WENV181364627
OFOZ01001892
[OFOZ] sediment metagenome; Lake sediment
188
264
+
Gln
TTG
[ENA]
¡û
>WENV181373297
OFQX01044498
[OFQX] wastewater metagenome; WWTP Novara (Effluent)
154
230
+
Gln
TTG
[ENA]
¡û
>WENV181378489
OFRB01011134
[OFRB] wastewater metagenome; Exp Tend CN 0WW
367
443
+
Gln
TTG
[ENA]
¡û
>WENV181390261
OFRO01032712
[OFRO] wastewater metagenome; Exp Tend NO 10WW
660
584
-
Gln
TTG
[ENA]
¡û
>WENV181411654
OGCI01036891
[OGCI] hot springs metagenome; Hot spring water
336
260
-
Gln
TTG
[ENA]
¡û
>WENV181414768
OGCL01001301
[OGCL] hot springs metagenome; Hot spring water
10242
10166
-
Gln
TTG
[ENA]
¡û
>WENV181415671
OGCL01018445
[OGCL] hot springs metagenome; Hot spring water
936
1012
+
Gln
TTG
[ENA]
¡û
>WENV183724879
PJQE01089165
[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
375
451
+
Gln
TTG
[ENA]
¡û
>WENV183725683
PJQF01007678
[PJQF] biofilm metagenome; biomolecule (vanillin) treated reverse osmosis membrane biofilm
597
521
-
Gln
TTG
[ENA]
¡û
>WENV183746417
POYD01005477
[POYD] biofilm metagenome; PVC pipe from biofilm reactor
515
439
-
Gln
TTG
[ENA]
¡û
>WENV170000022
AERA01001055
[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
29
105
+
Gln
TTG
[ENA]
¡û
>WENV170010534
APMI01019694
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
591
667
+
Gln
TTG
[ENA]
¡û
>WENV170018871
BBPD01001717
[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
33972
33896
-
Gln
TTG
[ENA]
¡û
>WENV170020214
BBPE01004256
[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
8357
8433
+
Gln
TTG
[ENA]
¡û
>WENV170551377
CXWJ01005966
[CXWJ] wastewater metagenome; activated sludge
9014
9090
+
Gln
TTG
[ENA]
¡û
>WENV170551805
CXWJ01023969
[CXWJ] wastewater metagenome; activated sludge
11
87
+
Gln
TTG
[ENA]
¡û
>WENV170552160
CXWJ01041977
[CXWJ] wastewater metagenome; activated sludge
11
87
+
Gln
TTG
[ENA]
¡û
>WENV170552301
CXWJ01053815
[CXWJ] wastewater metagenome; activated sludge
112
36
-
Gln
TTG
[ENA]
¡û
>WENV170554213
CXWK01054258
[CXWK] wastewater metagenome; activated sludge
1176
1100
-
Gln
TTG
[ENA]
¡û
>WENV170558699
CXWL01085706
[CXWL] groundwater metagenome; biofilm material
14912
14988
+
Gln
TTG
[ENA]
¡û
>WENV170651307
JRYF01006167
[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
2316
2392
+
Gln
TTG
[ENA]
¡û
>WENV170651308
JRYF01006168
[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
890
966
+
Gln
TTG
[ENA]
¡û
>WENV170653508
JRYJ01003066
[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
3097
3021
-
Gln
TTG
[ENA]
¡û
>WENV170707601
LNAP01026831
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
496
572
+
Gln
TTG
[ENA]
¡û
>WENV170709630
LNFM01000541
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
90536
90460
-
Gln
TTG
[ENA]
¡û
>WENV170713674
LNFM01038271
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
3696
3772
+
Gln
TTG
[ENA]
¡û
>C181064534
CP022423
Betaproteobacteria
Vitreoscilla filiformis ATCC 15551 [CP022423]
2828670
2828746
+
Gln
TTG
-
¡û
>C181103523
CP024645
Betaproteobacteria
Piscinibacter gummiphilus NBRC 109400 [CP024645]
1100863
1100787
-
Gln
TTG
-
¡û
>C191182082
CP040709
Betaproteobacteria
Inhella inkyongensis IMCC1713 [CP040709]
1079228
1079152
-
Gln
TTG
-
¡û
>W09101395
AAEM01000006
Betaproteobacteria
Methylibium petroleiphilum PM1 [AAEM]
107768
107692
-
Gln
TTG
[ENA]
¡û
>W1910699709
MERU01000004
Betaproteobacteria
Burkholderiales bacterium RIFCSPHIGHO2_01_FULL_63_240 [MERU]
354475
354551
+
Gln
TTG
[ENA]
¡û
>W1910699926
MESA01000031
Betaproteobacteria
Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_63_20 [MESA]
148485
148409
-
Gln
TTG
[ENA]
¡û
>W1910700324
MESK01000051
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_12_FULL_64_99 [MESK]
25844
25920
+
Gln
TTG
[ENA]
¡û
>W1911502761
OEQA01000002
Betaproteobacteria
Ottowia sp. Marseille-P4747 [OEQA]
709865
709941
+
Gln
TTG
[ENA]
¡û
>W1911701446
QNUI01000079
Betaproteobacteria
Comamonadaceae bacterium YIM 73032 [QNUI]
14593
14517
-
Gln
TTG
[ENA]
¡û
>W1911702188
QOAZ01000023
Betaproteobacteria
Comamonadaceae bacterium SYSU G00088 [QOAZ]
50982
50906
-
Gln
TTG
[ENA]
¡û
>W1911740739
QUSW01000005
Betaproteobacteria
Rhizobacter sp. S-16 [QUSW]
461314
461238
-
Gln
TTG
[ENA]
¡û
>W1810068024
PDZG01000005
Betaproteobacteria
Iodobacter sp. BJB302 [PDZG]
223
147
-
Gln
TTG
[ENA]
¡û
>W1810068025
PDZG01000007
Betaproteobacteria
Iodobacter sp. BJB302 [PDZG]
89545
89621
+
Gln
TTG
[ENA]
¡û
>W1810081349
PEOG01000019
Betaproteobacteria
Roseateles chitinivorans HWN-4 [PEOG]
11776
11700
-
Gln
TTG
[ENA]
¡û
>W1810222837
POSP01000003
Betaproteobacteria
Paucibacter aquatile CR182 [POSP]
1884940
1885016
+
Gln
TTG
[ENA]
¡û
>W1810273249
PSNX01000001
Betaproteobacteria
Caldimonas caldifontis BCRC 80649 [PSNX]
15558
15634
+
Gln
TTG
[ENA]
¡û
>C151081650
CP011371
Betaproteobacteria
Caldimonas brevitalea DSM 7029 [CP011371]
1167541
1167617
+
Gln
TTG
[Ensembl]
¡û
>C151090620
CP012073
Betaproteobacteria
Ottowia sp. oral taxon 894 W10237 [CP012073]
1739473
1739397
-
Gln
TTG
-
¡û
>W2010437995
JAAAPN010000007
Betaproteobacteria
Aquabacterium fontiphilum CS-6 [JAAAPN]
57549
57473
-
Gln
TTG
[ENA]
¡û
>W2010495161
JAALCQ010000004
Betaproteobacteria
Rubrivivax sp. JA1026 [JAALCQ]
16798
16874
+
Gln
TTG
[ENA]
¡û
>W2010528606
JAAOCD010000001
Betaproteobacteria
Rubrivivax benzoatilyticus JA2-Mal [JAAOCD]
318492
318416
-
Gln
TTG
[ENA]
¡û
>W2010528664
JAAOCE010000005
Betaproteobacteria
Rubrivivax benzoatilyticus JA2-Glc [JAAOCE]
318145
318069
-
Gln
TTG
[ENA]
¡û
>W2010530453
JAAOLX010000006
Betaproteobacteria
Iodobacter sp. HSC-16F04 [JAAOLX]
231106
231030
-
Gln
TTG
[ENA]
¡û
>W2010530454
JAAOLX010000006
Betaproteobacteria
Iodobacter sp. HSC-16F04 [JAAOLX]
117967
117891
-
Gln
TTG
[ENA]
¡û
>W2010587368
JABBFW010000001
Betaproteobacteria
Azohydromonas sp. G-1-1-14 [JABBFW]
38026
38102
+
Gln
TTG
[ENA]
¡û
>W2010587417
JABBFW010000015
Betaproteobacteria
Azohydromonas sp. G-1-1-14 [JABBFW]
78999
78923
-
Gln
TTG
[ENA]
¡û
>W2010612406
JABRWJ010000015
Betaproteobacteria
Aquincola sp. S2 [JABRWJ]
84518
84442
-
Gln
TTG
[ENA]
¡û
>W2010613210
JABSNM010000005
Betaproteobacteria
Leptothrix sp. C29 [JABSNM]
36792
36716
-
Gln
TTG
[ENA]
¡û
>W2010642106
JABWMJ010000005
Betaproteobacteria
Schlegelella sp. ID0723 [JABWMJ]
304195
304119
-
Gln
TTG
[ENA]
¡û
>W2010702687
JACHHN010000005
Betaproteobacteria
Silvimonas terrae DSM 18233 [JACHHN]
236588
236512
-
Gln
TTG
[ENA]
¡û
>W2010702732
JACHHO010000002
Betaproteobacteria
Inhella inkyongensis DSM 23958 [JACHHO]
392995
393071
+
Gln
TTG
[ENA]
¡û
>W2010703214
JACHHY010000008
Betaproteobacteria
Chitinivorax tropicus DSM 27165 [JACHHY]
174654
174730
+
Gln
TTG
[ENA]
¡û
>W2010708656
JACHLP010000011
Betaproteobacteria
Paucibacter oligotrophus S00239 [JACHLP]
83995
84071
+
Gln
TTG
[ENA]
¡û
>W2010716767
JACHXO010000005
Betaproteobacteria
Roseateles terrae CECT 7247 [JACHXO]
442875
442799
-
Gln
TTG
[ENA]
¡û
>W2010718392
JACHYS010000004
Betaproteobacteria
Mitsuaria sp. BK037 [JACHYS]
550994
550918
-
Gln
TTG
[ENA]
¡û
>W2010718436
JACHYT010000001
Betaproteobacteria
Mitsuaria sp. BK041 [JACHYT]
562781
562705
-
Gln
TTG
[ENA]
¡û
>W2010718494
JACHYU010000001
Betaproteobacteria
Mitsuaria sp. BK045 [JACHYU]
562781
562705
-
Gln
TTG
[ENA]
¡û
>W2010742993
JACJUG010000007
Betaproteobacteria
Mitsuaria sp. WAJ17 [JACJUG]
67679
67755
+
Gln
TTG
[ENA]
¡û
>W2010833135
MERU01000004
Betaproteobacteria
Burkholderiales bacterium RIFCSPHIGHO2_01_FULL_63_240 [MERU]
354475
354551
+
Gln
TTG
[ENA]
¡û
>W2010833352
MESA01000031
Betaproteobacteria
Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_63_20 [MESA]
148485
148409
-
Gln
TTG
[ENA]
¡û
>W2010833750
MESK01000051
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_12_FULL_64_99 [MESK]
25844
25920
+
Gln
TTG
[ENA]
¡û
>W2011161158
OEQA01000002
Betaproteobacteria
Ottowia sp. Marseille-P4747 [OEQA]
709865
709941
+
Gln
TTG
[ENA]
¡û
>W2011277986
QNUI01000079
Betaproteobacteria
Comamonadaceae bacterium YIM 73032 [QNUI]
14593
14517
-
Gln
TTG
[ENA]
¡û
>W2011278803
QOAZ01000023
Betaproteobacteria
Comamonadaceae bacterium SYSU G00088 [QOAZ]
50982
50906
-
Gln
TTG
[ENA]
¡û
>W2011306187
QUSW01000005
Betaproteobacteria
Rhizobacter sp. S-16 [QUSW]
461314
461238
-
Gln
TTG
[ENA]
¡û
>W2011410471
RDQK01000016
Betaproteobacteria
Comamonadaceae bacterium NML180581 [RDQK]
3996
4072
+
Gln
TTG
[ENA]
¡û
>W2011410539
RDQL01000025
Betaproteobacteria
Comamonadaceae bacterium NML161473 [RDQL]
4375
4299
-
Gln
TTG
[ENA]
¡û
>W2011410568
RDQM01000010
Betaproteobacteria
Comamonadaceae bacterium NML970147 [RDQM]
63330
63406
+
Gln
TTG
[ENA]
¡û
>W2011484179
RQYX01000031
Betaproteobacteria
Comamonadaceae bacterium OH3737_COT-264 [RQYX]
17559
17483
-
Gln
TTG
[ENA]
¡û
>W2011522102
SACM01000002
Betaproteobacteria
Inhella sp. CCP-18 [SACM]
275073
274997
-
Gln
TTG
[ENA]
¡û
>W2011522339
SACR01000002
Betaproteobacteria
Ideonella sp. KYPY4 [SACR]
359340
359416
+
Gln
TTG
[ENA]
¡û
>W2011522473
SACT01000001
Betaproteobacteria
Rubrivivax sp. ICH-3 [SACT]
262898
262822
-
Gln
TTG
[ENA]
¡û
>W2011538241
SCMV01000075
Betaproteobacteria
Comamonadaceae bacterium 2PF [SCMV]
3373
3449
+
Gln
TTG
[ENA]
¡û
>W2011540178
SCOH01000063
Betaproteobacteria
Chitinivorax sp. B [SCOH]
3948
3872
-
Gln
TTG
[ENA]
¡û
>W2011603060
SIXI01000001
Betaproteobacteria
Aquabacterium sp. KMB7 [SIXI]
305079
305155
+
Gln
TTG
[ENA]
¡û
>W2011622727
SLXD01000001
Betaproteobacteria
Rubrivivax gelatinosus DSM 1709 [SLXD]
20877
20953
+
Gln
TTG
[ENA]
¡û
>W2011622833
SLXF01000002
Betaproteobacteria
Schlegelella thermodepolymerans DSM 15264 [SLXF]
609384
609308
-
Gln
TTG
[ENA]
¡û
>W2011627297
SMAH01000010
Betaproteobacteria
Tepidimonas ignava DSM 12034 [SMAH]
87049
86973
-
Gln
TTG
[ENA]
¡û
>W2011648951
SNXE01000003
Betaproteobacteria
Kinneretia asaccharophila DSM 25082 [SNXE]
362911
362987
+
Gln
TTG
[ENA]
¡û
>W2011650631
SNYL01000004
Betaproteobacteria
Tepidicella xavieri DSM 19605 [SNYL]
33863
33787
-
Gln
TTG
[ENA]
¡û
>W2011696996
SUMF01000019
Betaproteobacteria
Chitiniphilus sp. HX-2-15 [SUMF]
25519
25595
+
Gln
TTG
[ENA]
¡û
>W2011701386
SWAR01000009
Betaproteobacteria
Rivibacter sp. C1-9 [SWAR]
66485
66409
-
Gln
TTG
[ENA]
¡û
>W2011825016
UGHR01000003
Betaproteobacteria
Iodobacter fluviatilis NCTC11159 [UGHR]
237054
236978
-
Gln
TTG
[ENA]
¡û
>W2011825017
UGHR01000003
Betaproteobacteria
Iodobacter fluviatilis NCTC11159 [UGHR]
121512
121436
-
Gln
TTG
[ENA]
¡û
>W2012062115
VJNA01000012
Betaproteobacteria
Tepidimonas aquatica CLN-1 [VJNA]
2667
2591
-
Gln
TTG
[ENA]
¡û
>W2012062229
VJNC01000010
Betaproteobacteria
Tepidimonas ignava SPS-1037 [VJNC]
87081
87005
-
Gln
TTG
[ENA]
¡û
>W2012062761
VJOL01000024
Betaproteobacteria
Tepidimonas thermarum AA-1 [VJOL]
16311
16387
+
Gln
TTG
[ENA]
¡û
>W2012062830
VJOM01000034
Betaproteobacteria
Tepidimonas taiwanensis I1-1 [VJOM]
2567
2491
-
Gln
TTG
[ENA]
¡û
>W2012062856
VJON01000016
Betaproteobacteria
Tepidimonas sp. SPSP-6 [VJON]
40719
40643
-
Gln
TTG
[ENA]
¡û
>W2012062923
VJOO01000015
Betaproteobacteria
Tepidimonas fonticaldi AT-A2 [VJOO]
7135
7059
-
Gln
TTG
[ENA]
¡û
>W2012106181
VOPW01000001
Betaproteobacteria
Piscinibacter aquaticus KACC 15278 [VOPW]
3281320
3281396
+
Gln
TTG
[ENA]
¡û
>W2012108160
VOSR01000184
Betaproteobacteria
Mitsuaria sp. TWR114 [VOSR]
1645
1721
+
Gln
TTG
[ENA]
¡û
>W2110030991
BMLY01000002
Betaproteobacteria
Silvimonas amylolytica CGMCC 1.8860 [BMLY]
487207
487131
-
Gln
TTG
[ENA]
¡û
>W2110119971
CAJPFZ010000093
Betaproteobacteria
Burkholderiaceae bacterium [CAJPFZ]
2573
2649
+
Gln
TTG
[ENA]
¡û
>W2110362785
JADOUB010000001
Betaproteobacteria
Rubrivivax gelatinosus CBS [JADOUB]
2714540
2714464
-
Gln
TTG
[ENA]
¡û
>W2110406152
JAEDAL010000001
Betaproteobacteria
Inhella gelatinilytica 4Y10 [JAEDAL]
118801
118877
+
Gln
TTG
[ENA]
¡û
>W2110445484
JAERQZ010000001
Betaproteobacteria
Piscinibacter sp. HJYY11 [JAERQZ]
2369081
2369157
+
Gln
TTG
[ENA]
¡û
>W2110445549
JAERRA010000001
Betaproteobacteria
Piscinibacter sp. Jin2 [JAERRA]
609667
609591
-
Gln
TTG
[ENA]
¡û
>C201095188
CP041335
Betaproteobacteria
Chitinolyticbacter meiyuanensis SYBC-H1 [CP041335]
4172967
4172891
-
Gln
TTG
-
¡û
>C201095463
CP041352
Betaproteobacteria
Casimicrobium huifangae SJ-1 [CP041352]
555309
555385
+
Gln
TTG
-
¡û
>C211190762
CP064338
Betaproteobacteria
Schlegelella thermodepolymerans DSM 15344 [CP064338]
3109049
3108973
-
Gln
TTG
-
¡û
>C211406006
CP083911
Betaproteobacteria
Tepidimonas taiwanensis LMG 22826 [CP083911]
357433
357357
-
Gln
TTG
-
¡û
>W1510021368
BBYR01000055
Betaproteobacteria
Piscinibacter sakaiensis 201-F6 [BBYR]
1984
1908
-
Gln
TTG
[ENA]
¡û
>W2110753301
NRRI01000031
Betaproteobacteria
Rubrivivax gelatinosus DSM 1709 [NRRI]
20909
20985
+
Gln
TTG
[ENA]
¡û
>W2110754532
NSLA01000013
Betaproteobacteria
Rubrivivax gelatinosus IM 456 [NSLA]
28964
28888
-
Gln
TTG
[ENA]
¡û
>C231388579
CP097636
Betaproteobacteria
Aquincola tertiaricarbonis RN12 [CP097635, CP097636]
477917
477841
-
Gln
TTG
-
¡û
>C231502985
CP106753
Betaproteobacteria
Chitiniphilus sp. CD1 [CP106753]
888054
887978
-
Gln
TTG
-
¡û
>C231529473
CP110257
Betaproteobacteria
Schlegelella aquatica LMG 23380 [CP110257]
2714083
2714007
-
Gln
TTG
-
¡û
>C231533236
CP110416
Betaproteobacteria
Caldimonas thermodepolymerans DSM 15264 [CP110416]
3289788
3289712
-
Gln
TTG
-
¡û
>W2310025990
BSOZ01000024
Betaproteobacteria
Chitiniphilus shinanonensis NBRC 104970 [BSOZ]
33687
33611
-
Gln
TTG
[ENA]
¡û
>WENV11100380
AERA01001055
[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
29
105
+
Gln
TTG
[ENA]
¡û
>W1511348490
JRKM01000001
Betaproteobacteria
Aquabacterium sp. NJ1 [JRKM]
864575
864651
+
Gln
TTG
[ENA]
¡û
>W1511403226
JTKY01000025
Betaproteobacteria
Tepidimonas taiwanensis VT154-175 [JTKY]
2495
2419
-
Gln
TTG
[ENA]
¡û
>W1511432406
JUGM01000016
Betaproteobacteria
Methylibium sp. CF059 [JUGM]
177143
177067
-
Gln
TTG
[ENA]
¡û
>W1511433148
JUGZ01000018
Betaproteobacteria
Methylibium sp. CF468 [JUGZ]
56836
56760
-
Gln
TTG
[ENA]
¡û
>W1511433180
JUHA01000002
Betaproteobacteria
Methylibium sp. YR605 [JUHA]
102277
102201
-
Gln
TTG
[ENA]
¡û
>W11150933
AEWG01000141
Betaproteobacteria
Rubrivivax benzoatilyticus JA2 [AEWG]
27402
27326
-
Gln
TTG
[ENA]
¡û
>C121001129
AP012320
Betaproteobacteria
Rubrivivax gelatinosus IL144 [AP012320]
902729
902653
-
Gln
TTG
[Ensembl]
¡û
>C161059580
CP013692
Betaproteobacteria
Paucibacter sp. KCTC 42545 [CP013692]
374510
374434
-
Gln
TTG
[Ensembl]
¡û
>C161060316
CP013729
Betaproteobacteria
Roseateles depolymerans KCTC 42856 [CP013729]
1234812
1234736
-
Gln
TTG
[Ensembl]
¡û
>W121060113
AJFF01000305
Betaproteobacteria
Rubrivivax gelatinosus CBS [AJFF]
3862
3786
-
Gln
TTG
[ENA]
¡û
>W1610074111
BCWK01000002
Betaproteobacteria
Caldimonas taiwanensis NBRC 104434 [BCWK]
118180
118104
-
Gln
TTG
[ENA]
¡û
>W1610076227
BCYP01000001
Betaproteobacteria
Roseateles chitosanitabidus NBRC 102408 [BCYP]
235770
235694
-
Gln
TTG
[ENA]
¡û
>W1610604914
LFRI01000516
Betaproteobacteria
Aquabacterium parvum [LFRI]
165703
165779
+
Gln
TTG
[ENA]
¡û
>W1610649106
LJHT01000002
Betaproteobacteria
beta proteobacterium AAP51 [LJHT]
11671
11595
-
Gln
TTG
[ENA]
¡û
>W1610649439
LJIA01000007
Betaproteobacteria
beta proteobacterium AAP99 [LJIA]
208100
208024
-
Gln
TTG
[ENA]
¡û
>W1610722360
LMCN01000040
Betaproteobacteria
Rhizobacter sp. Root29 [LMCN]
17286
17362
+
Gln
TTG
[ENA]
¡û
>W1610723606
LMDM01000003
Betaproteobacteria
Rhizobacter sp. Root1238 [LMDM]
59099
59023
-
Gln
TTG
[ENA]
¡û
>W1610728774
LMHL01000016
Betaproteobacteria
Rhizobacter sp. Root16D2 [LMHL]
57932
57856
-
Gln
TTG
[ENA]
¡û
>W1610753882
LNEY01000010
Betaproteobacteria
Burkholderiales bacterium Ga0077547 [LNEY]
20020
20096
+
Gln
TTG
[ENA]
¡û
>W1610800445
LOQE01000042
Betaproteobacteria
Tepidimonas taiwanensis [LOQE]
23589
23665
+
Gln
TTG
[ENA]
¡û
>W1611029636
LZDH01000065
Betaproteobacteria
Tepidimonas fonticaldi [LZDH]
248213
248289
+
Gln
TTG
[ENA]
¡û
>W1710071229
BCWK01000002
Betaproteobacteria
Caldimonas taiwanensis NBRC 104434 [BCWK]
118180
118104
-
Gln
TTG
[ENA]
¡û
>W1710074042
BCYP01000001
Betaproteobacteria
Roseateles chitosanitabidus NBRC 102408 [BCYP]
235770
235694
-
Gln
TTG
[ENA]
¡û
>W1710544491
FOAV01000014
Betaproteobacteria
Roseateles sp. YR242 [FOAV]
92820
92744
-
Gln
TTG
[ENA]
¡û
>W1710575443
FOZE01000001
Betaproteobacteria
Mitsuaria sp. PDC51 [FOZE]
558443
558367
-
Gln
TTG
[ENA]
¡û
>W1710592644
FRCQ01000003
Betaproteobacteria
Rhizobacter sp. OV335 [FRCQ]
56711
56635
-
Gln
TTG
[ENA]
¡û
>W1710726357
LFRI01000516
Betaproteobacteria
Aquabacterium parvum [LFRI]
165703
165779
+
Gln
TTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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