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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.180358 (281 seq.)
>W1710860645
LMDB01000002
Betaproteobacteria
Duganella sp. Root336D2 [LMDB]
98092
98008
-
Leu
CAG
[ENA]
¡û
>W1710860646
LMDB01000002
Betaproteobacteria
Duganella sp. Root336D2 [LMDB]
96709
96625
-
Leu
CAG
[ENA]
¡û
>W1710860647
LMDB01000002
Betaproteobacteria
Duganella sp. Root336D2 [LMDB]
92462
92378
-
Leu
CAG
[ENA]
¡û
>W1710860648
LMDB01000002
Betaproteobacteria
Duganella sp. Root336D2 [LMDB]
92344
92260
-
Leu
CAG
[ENA]
¡û
>W1710861052
LMDJ01000012
Betaproteobacteria
Massilia sp. Root351 [LMDJ]
160786
160870
+
Leu
CAG
[ENA]
¡û
>W1710861053
LMDJ01000012
Betaproteobacteria
Massilia sp. Root351 [LMDJ]
162172
162256
+
Leu
CAG
[ENA]
¡û
>W1710861054
LMDJ01000012
Betaproteobacteria
Massilia sp. Root351 [LMDJ]
162399
162483
+
Leu
CAG
[ENA]
¡û
>W1710861055
LMDJ01000012
Betaproteobacteria
Massilia sp. Root351 [LMDJ]
162524
162608
+
Leu
CAG
[ENA]
¡û
>W1710861056
LMDJ01000012
Betaproteobacteria
Massilia sp. Root351 [LMDJ]
164324
164408
+
Leu
CAG
[ENA]
¡û
>W1710861057
LMDJ01000012
Betaproteobacteria
Massilia sp. Root351 [LMDJ]
164426
164510
+
Leu
CAG
[ENA]
¡û
>W1710862082
LMEC01000026
Betaproteobacteria
Massilia sp. Root418 [LMEC]
145770
145854
+
Leu
CAG
[ENA]
¡û
>W1710862083
LMEC01000026
Betaproteobacteria
Massilia sp. Root418 [LMEC]
147171
147255
+
Leu
CAG
[ENA]
¡û
>W1710862084
LMEC01000026
Betaproteobacteria
Massilia sp. Root418 [LMEC]
147418
147502
+
Leu
CAG
[ENA]
¡û
>W1710862085
LMEC01000026
Betaproteobacteria
Massilia sp. Root418 [LMEC]
147543
147627
+
Leu
CAG
[ENA]
¡û
>W1710862086
LMEC01000026
Betaproteobacteria
Massilia sp. Root418 [LMEC]
149316
149400
+
Leu
CAG
[ENA]
¡û
>W1710864579
LMFZ01000003
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
57422
57338
-
Leu
CAG
[ENA]
¡û
>W1710864580
LMFZ01000003
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
57304
57220
-
Leu
CAG
[ENA]
¡û
>W1710867244
LMIC01000034
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
104518
104434
-
Leu
CAG
[ENA]
¡û
>W1710867245
LMIC01000034
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
103135
103051
-
Leu
CAG
[ENA]
¡û
>W1710867246
LMIC01000034
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
98888
98804
-
Leu
CAG
[ENA]
¡û
>W1710867247
LMIC01000034
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
98770
98686
-
Leu
CAG
[ENA]
¡û
>W1710871762
LMLM01000002
Betaproteobacteria
Duganella sp. Leaf61 [LMLM]
27423
27507
+
Leu
CAG
[ENA]
¡û
>W1710871764
LMLM01000002
Betaproteobacteria
Duganella sp. Leaf61 [LMLM]
27780
27864
+
Leu
CAG
[ENA]
¡û
>W1710871765
LMLM01000002
Betaproteobacteria
Duganella sp. Leaf61 [LMLM]
27870
27954
+
Leu
CAG
[ENA]
¡û
>W1710871766
LMLM01000002
Betaproteobacteria
Duganella sp. Leaf61 [LMLM]
28135
28219
+
Leu
CAG
[ENA]
¡û
>W1710871767
LMLM01000002
Betaproteobacteria
Duganella sp. Leaf61 [LMLM]
28235
28319
+
Leu
CAG
[ENA]
¡û
>W1710874739
LMNW01000003
Betaproteobacteria
Duganella sp. Leaf126 [LMNW]
255215
255131
-
Leu
CAG
[ENA]
¡û
>W1710874740
LMNW01000003
Betaproteobacteria
Duganella sp. Leaf126 [LMNW]
255115
255031
-
Leu
CAG
[ENA]
¡û
>W1710874741
LMNW01000003
Betaproteobacteria
Duganella sp. Leaf126 [LMNW]
254826
254742
-
Leu
CAG
[ENA]
¡û
>W1710874742
LMNW01000003
Betaproteobacteria
Duganella sp. Leaf126 [LMNW]
254730
254646
-
Leu
CAG
[ENA]
¡û
>W1710874743
LMNW01000003
Betaproteobacteria
Duganella sp. Leaf126 [LMNW]
247506
247422
-
Leu
CAG
[ENA]
¡û
>W1710893458
LNEU01000015
Betaproteobacteria
Burkholderiales bacterium Ga0077544 [LNEU]
97732
97648
-
Leu
CAG
[ENA]
¡û
>W1711033332
LRHV01000008
Betaproteobacteria
Duganella sp. HH105 [LRHV]
233874
233790
-
Leu
CAG
[ENA]
¡û
>W1711033333
LRHV01000008
Betaproteobacteria
Duganella sp. HH105 [LRHV]
230651
230567
-
Leu
CAG
[ENA]
¡û
>W1711046614
LROM01000076
Betaproteobacteria
Duganella phyllosphaerae [LROM]
1075
1159
+
Leu
CAG
[ENA]
¡û
>W1711046631
LROM01000122
Betaproteobacteria
Duganella phyllosphaerae [LROM]
22301
22385
+
Leu
CAG
[ENA]
¡û
>W1711046632
LROM01000122
Betaproteobacteria
Duganella phyllosphaerae [LROM]
23419
23503
+
Leu
CAG
[ENA]
¡û
>W1711046669
LRON01000006
Betaproteobacteria
Duganella sp. HH101 [LRON]
36803
36887
+
Leu
CAG
[ENA]
¡û
>W1711046670
LRON01000006
Betaproteobacteria
Duganella sp. HH101 [LRON]
40029
40113
+
Leu
CAG
[ENA]
¡û
>W1711046671
LRON01000006
Betaproteobacteria
Duganella sp. HH101 [LRON]
40276
40360
+
Leu
CAG
[ENA]
¡û
>W1711046672
LRON01000006
Betaproteobacteria
Duganella sp. HH101 [LRON]
40544
40628
+
Leu
CAG
[ENA]
¡û
>C171130540
LT671418
Betaproteobacteria
Herminiimonas arsenitoxidans AS8 [LT671418]
234596
234512
-
Leu
CAG
-
¡û
>W131050099
AMWD01000001
Betaproteobacteria
Janthinobacterium sp. HH01 [AMWD]
2836780
2836696
-
Leu
CAG
[ENA]
¡û
>W131050100
AMWD01000001
Betaproteobacteria
Janthinobacterium sp. HH01 [AMWD]
2833590
2833506
-
Leu
CAG
[ENA]
¡û
>W131050101
AMWD01000001
Betaproteobacteria
Janthinobacterium sp. HH01 [AMWD]
2833345
2833261
-
Leu
CAG
[ENA]
¡û
>W131050102
AMWD01000001
Betaproteobacteria
Janthinobacterium sp. HH01 [AMWD]
2832293
2832209
-
Leu
CAG
[ENA]
¡û
>W131176182
ARJV01000023
Betaproteobacteria
Duganella zoogloeoides ATCC 25935 [ARJV]
290851
290767
-
Leu
CAG
[ENA]
¡û
>W131176183
ARJV01000023
Betaproteobacteria
Duganella zoogloeoides ATCC 25935 [ARJV]
287974
287890
-
Leu
CAG
[ENA]
¡û
>W131176184
ARJV01000023
Betaproteobacteria
Duganella zoogloeoides ATCC 25935 [ARJV]
287132
287048
-
Leu
CAG
[ENA]
¡û
>W131179112
ARMC01000031
Betaproteobacteria
Oxalobacteraceae bacterium AB_14 [ARMC]
504396
504312
-
Leu
CAG
[ENA]
¡û
>W131179113
ARMC01000031
Betaproteobacteria
Oxalobacteraceae bacterium AB_14 [ARMC]
501187
501103
-
Leu
CAG
[ENA]
¡û
>W131179114
ARMC01000031
Betaproteobacteria
Oxalobacteraceae bacterium AB_14 [ARMC]
500927
500843
-
Leu
CAG
[ENA]
¡û
>W131179115
ARMC01000031
Betaproteobacteria
Oxalobacteraceae bacterium AB_14 [ARMC]
500662
500578
-
Leu
CAG
[ENA]
¡û
>W131225126
AUDI01000006
Betaproteobacteria
Pseudoduganella violaceinigra DSM 15887 [AUDI]
123889
123973
+
Leu
CAG
[ENA]
¡û
>W131225127
AUDI01000006
Betaproteobacteria
Pseudoduganella violaceinigra DSM 15887 [AUDI]
124007
124091
+
Leu
CAG
[ENA]
¡û
>C010387
CU207211
Betaproteobacteria
Herminiimonas arsenicoxydans [CU207211]
1295769
1295685
-
Leu
CAG
[Ensembl]
¡û
>C011126
CP000269
Betaproteobacteria
Janthinobacterium sp. Marseille [CP000269]
2385786
2385870
+
Leu
CAG
[Ensembl]
¡û
>WENV180018477
FSZM01000013
[FSZM] metagenome; soil
1
85
+
Leu
CAG
[ENA]
¢þ
>WENV180018478
FSZM01000013
[FSZM] metagenome; soil
5587
5671
+
Leu
CAG
[ENA]
¢þ
>WENV180018491
FSZM01000072
[FSZM] metagenome; soil
26976
27060
+
Leu
CAG
[ENA]
¢þ
>WENV180018492
FSZM01000072
[FSZM] metagenome; soil
28449
28533
+
Leu
CAG
[ENA]
¢þ
>WENV180022324
FTFY01000849
[FTFY] metagenome; soil
1319
1403
+
Leu
CAG
[ENA]
¢þ
>WENV180022343
FTFY01001154
[FTFY] metagenome; soil
30079
30163
+
Leu
CAG
[ENA]
¢þ
>WENV180024848
FTIJ01151505
[FTIJ] metagenome; soil
12
96
+
Leu
CAG
[ENA]
¢þ
>WENV180025746
FTIQ01016032
[FTIQ] metagenome; soil
1109
1025
-
Leu
CAG
[ENA]
¢þ
>WENV180025797
FTIQ01103838
[FTIQ] metagenome; soil
54
138
+
Leu
CAG
[ENA]
¢þ
>WENV180026503
FTIU01000384
[FTIU] metagenome; soil
2998
3082
+
Leu
CAG
[ENA]
¢þ
>WENV180026527
FTIU01001320
[FTIU] metagenome; soil
6241
6325
+
Leu
CAG
[ENA]
¢þ
>WENV180026665
FTIU01014362
[FTIU] metagenome; soil
1837
1753
-
Leu
CAG
[ENA]
¢þ
>WENV180029681
FTJL01000393
[FTJL] metagenome; soil
7539
7455
-
Leu
CAG
[ENA]
¢þ
>WENV180035096
FTKT01001613
[FTKT] metagenome; soil
2445
2361
-
Leu
CAG
[ENA]
¢þ
>WENV180035147
FTKT01002860
[FTKT] metagenome; soil
2506
2590
+
Leu
CAG
[ENA]
¢þ
>WENV180040685
LLBZ010006586
[LLBZ] soil metagenome; soil from tomato rhizosphere
27578
27494
-
Leu
CAG
[ENA]
¢þ
>WENV180268505
OBEQ011974327
[OBEQ] groundwater metagenome; groundwater
529
445
-
Leu
CAG
[ENA]
¢þ
>WENV180308733
OBJR01152919
[OBJR] soil metagenome; soil
194
110
-
Leu
CAG
[ENA]
¢þ
>WENV180344454
OBLL01002423
[OBLL] soil metagenome; soil
281
197
-
Leu
CAG
[ENA]
¢þ
>WENV180345264
OBLM01173609
[OBLM] soil metagenome; soil
103
187
+
Leu
CAG
[ENA]
¢þ
>WENV180355148
OBNG01016814
[OBNG] sediment metagenome; sediment
300
216
-
Leu
CAG
[ENA]
¢þ
>WENV181838900
OGVN01031653
[OGVN] freshwater metagenome; freshwater
389
473
+
Leu
CAG
[ENA]
¢þ
>W141258904
CBXX010000013
Betaproteobacteria
Herbaspirillum sp. RV1423 [CBXX]
89237
89153
-
Leu
CAG
[ENA]
¡û
>W141258905
CBXX010000013
Betaproteobacteria
Herbaspirillum sp. RV1423 [CBXX]
87680
87596
-
Leu
CAG
[ENA]
¡û
>WENV183744311
PJUK01006530
[PJUK] feces metagenome; Chicken feces enriched on filter paper: alkali lignin treatment
97
181
+
Leu
CAG
[ENA]
¢þ
>WENV170558539
CXWL01077209
[CXWL] groundwater metagenome; biofilm material
2533
2617
+
Leu
CAG
[ENA]
¢þ
>WENV170558540
CXWL01077209
[CXWL] groundwater metagenome; biofilm material
2738
2822
+
Leu
CAG
[ENA]
¢þ
>WENV170559482
CXWL01125150
[CXWL] groundwater metagenome; biofilm material
1277
1193
-
Leu
CAG
[ENA]
¢þ
>WENV170708892
LNFM01000019
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
102893
102809
-
Leu
CAG
[ENA]
¢þ
>C181071863
CP022736
Betaproteobacteria
Herbaspirillum sp. meg3 [CP022736]
1974344
1974260
-
Leu
CAG
-
¡û
>C181071864
CP022736
Betaproteobacteria
Herbaspirillum sp. meg3 [CP022736]
1973766
1973682
-
Leu
CAG
-
¡û
>C181163979
CP028324
Betaproteobacteria
Pseudoduganella armeniaca ZMN-3 [CP028324]
2811909
2811825
-
Leu
CAG
-
¡û
>C181187731
CP030092
Betaproteobacteria
Massilia sp. YMA4 [CP030092]
2325709
2325793
+
Leu
CAG
-
¡û
>C191138922
CP035311
Betaproteobacteria
Janthinobacterium sp. 17J80-10 [CP035311]
2676494
2676578
+
Leu
CAG
-
¡û
>C191150787
CP036401
Betaproteobacteria
Pseudoduganella albidiflava DSM 17472 [CP036401]
4274766
4274850
+
Leu
CAG
-
¡û
>C191150788
CP036401
Betaproteobacteria
Pseudoduganella albidiflava DSM 17472 [CP036401]
4277664
4277748
+
Leu
CAG
-
¡û
>C191150789
CP036401
Betaproteobacteria
Pseudoduganella albidiflava DSM 17472 [CP036401]
4278051
4278135
+
Leu
CAG
-
¡û
>C191150790
CP036401
Betaproteobacteria
Pseudoduganella albidiflava DSM 17472 [CP036401]
4279494
4279578
+
Leu
CAG
-
¡û
>C191150791
CP036401
Betaproteobacteria
Pseudoduganella albidiflava DSM 17472 [CP036401]
4279659
4279743
+
Leu
CAG
-
¡û
>C191157323
CP038026
Betaproteobacteria
Pseudoduganella plicata DSM 17505 [CP038026]
5864364
5864280
-
Leu
CAG
-
¡û
>C191157324
CP038026
Betaproteobacteria
Pseudoduganella plicata DSM 17505 [CP038026]
5862822
5862738
-
Leu
CAG
-
¡û
>C191157325
CP038026
Betaproteobacteria
Pseudoduganella plicata DSM 17505 [CP038026]
5862694
5862610
-
Leu
CAG
-
¡û
>C191174032
CP040017
Betaproteobacteria
Pseudoduganella umbonata DSMZ 26121 [CP040017]
46650
46566
-
Leu
CAG
-
¡û
>C191174033
CP040017
Betaproteobacteria
Pseudoduganella umbonata DSMZ 26121 [CP040017]
46166
46082
-
Leu
CAG
-
¡û
>C191174034
CP040017
Betaproteobacteria
Pseudoduganella umbonata DSMZ 26121 [CP040017]
44545
44461
-
Leu
CAG
-
¡û
>C191174035
CP040017
Betaproteobacteria
Pseudoduganella umbonata DSMZ 26121 [CP040017]
44376
44292
-
Leu
CAG
-
¡û
>W1910700092
MESE01000094
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36 [MESE]
109946
109862
-
Leu
CAG
[ENA]
¡û
>W1911572382
PDBX01000001
Betaproteobacteria
Collimonas sp. PA-H2 [PDBX]
5470296
5470212
-
Leu
CAG
[ENA]
¡û
>W1911572384
PDBX01000001
Betaproteobacteria
Collimonas sp. PA-H2 [PDBX]
5041651
5041567
-
Leu
CAG
[ENA]
¡û
>W1911647604
QAJP01000004
Betaproteobacteria
Herminiimonas sp. KBW02 [QAJP]
715723
715639
-
Leu
CAG
[ENA]
¡û
>W1911802878
QYUP01000155
Betaproteobacteria
Massilia cavernae K1S02-61 [QYUP]
9583
9499
-
Leu
CAG
[ENA]
¡û
>W1911802928
QYUQ01000002
Betaproteobacteria
Noviherbaspirillum sedimenti K1S02-23 [QYUQ]
396657
396573
-
Leu
CAG
[ENA]
¡û
>W1810068743
PDZP01000011
Betaproteobacteria
Janthinobacterium sp. BJB412 [PDZP]
6576
6660
+
Leu
CAG
[ENA]
¡û
>W1810068744
PDZP01000011
Betaproteobacteria
Janthinobacterium sp. BJB412 [PDZP]
8404
8488
+
Leu
CAG
[ENA]
¡û
>W1810068745
PDZP01000011
Betaproteobacteria
Janthinobacterium sp. BJB412 [PDZP]
8660
8744
+
Leu
CAG
[ENA]
¡û
>W1810068746
PDZP01000011
Betaproteobacteria
Janthinobacterium sp. BJB412 [PDZP]
8935
9019
+
Leu
CAG
[ENA]
¡û
>W1810068747
PDZP01000011
Betaproteobacteria
Janthinobacterium sp. BJB412 [PDZP]
9216
9300
+
Leu
CAG
[ENA]
¡û
>SRA1003412
SRR002326.451314
The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
204
120
-
Leu
CAG
[SRA]
>W1810297225
PTLZ01000002
Betaproteobacteria
Herminiimonas fonticola S-94 [PTLZ]
519389
519305
-
Leu
CAG
[ENA]
¡û
>W1810486610
QAXZ01000005
Betaproteobacteria
Massilia sp. GV045 [QAXZ]
488601
488517
-
Leu
CAG
[ENA]
¡û
>W1810486611
QAXZ01000005
Betaproteobacteria
Massilia sp. GV045 [QAXZ]
487190
487106
-
Leu
CAG
[ENA]
¡û
>W1810486612
QAXZ01000005
Betaproteobacteria
Massilia sp. GV045 [QAXZ]
486943
486859
-
Leu
CAG
[ENA]
¡û
>W1810486613
QAXZ01000005
Betaproteobacteria
Massilia sp. GV045 [QAXZ]
486808
486724
-
Leu
CAG
[ENA]
¡û
>W1810486614
QAXZ01000005
Betaproteobacteria
Massilia sp. GV045 [QAXZ]
485000
484916
-
Leu
CAG
[ENA]
¡û
>W1810487097
QAYI01000003
Betaproteobacteria
Massilia sp. GV016 [QAYI]
165600
165684
+
Leu
CAG
[ENA]
¡û
>W1810487098
QAYI01000003
Betaproteobacteria
Massilia sp. GV016 [QAYI]
167011
167095
+
Leu
CAG
[ENA]
¡û
>W1810487099
QAYI01000003
Betaproteobacteria
Massilia sp. GV016 [QAYI]
167258
167342
+
Leu
CAG
[ENA]
¡û
>W1810487100
QAYI01000003
Betaproteobacteria
Massilia sp. GV016 [QAYI]
167393
167477
+
Leu
CAG
[ENA]
¡û
>W1810487101
QAYI01000003
Betaproteobacteria
Massilia sp. GV016 [QAYI]
169201
169285
+
Leu
CAG
[ENA]
¡û
>W1810672474
QJTL01000005
Betaproteobacteria
Duganella sp. GV083 [QJTL]
318943
319027
+
Leu
CAG
[ENA]
¡û
>W1810672475
QJTL01000005
Betaproteobacteria
Duganella sp. GV083 [QJTL]
320817
320901
+
Leu
CAG
[ENA]
¡û
>W1810672476
QJTL01000005
Betaproteobacteria
Duganella sp. GV083 [QJTL]
321098
321182
+
Leu
CAG
[ENA]
¡û
>W1810672477
QJTL01000005
Betaproteobacteria
Duganella sp. GV083 [QJTL]
321210
321294
+
Leu
CAG
[ENA]
¡û
>W1810672584
QJTN01000003
Betaproteobacteria
Massilia sp. GV024 [QJTN]
165600
165684
+
Leu
CAG
[ENA]
¡û
>W1810672585
QJTN01000003
Betaproteobacteria
Massilia sp. GV024 [QJTN]
167011
167095
+
Leu
CAG
[ENA]
¡û
>W1810672586
QJTN01000003
Betaproteobacteria
Massilia sp. GV024 [QJTN]
167258
167342
+
Leu
CAG
[ENA]
¡û
>W1810672587
QJTN01000003
Betaproteobacteria
Massilia sp. GV024 [QJTN]
167393
167477
+
Leu
CAG
[ENA]
¡û
>W1810672588
QJTN01000003
Betaproteobacteria
Massilia sp. GV024 [QJTN]
169201
169285
+
Leu
CAG
[ENA]
¡û
>W1810677182
QKMN01000005
Betaproteobacteria
Duganella sp. GV053 [QKMN]
318943
319027
+
Leu
CAG
[ENA]
¡û
>W1810677183
QKMN01000005
Betaproteobacteria
Duganella sp. GV053 [QKMN]
320817
320901
+
Leu
CAG
[ENA]
¡û
>W1810677184
QKMN01000005
Betaproteobacteria
Duganella sp. GV053 [QKMN]
321098
321182
+
Leu
CAG
[ENA]
¡û
>W1810677185
QKMN01000005
Betaproteobacteria
Duganella sp. GV053 [QKMN]
321210
321294
+
Leu
CAG
[ENA]
¡û
>W1810693418
QLLJ01000005
Betaproteobacteria
Duganella sp. GV066 [QLLJ]
318943
319027
+
Leu
CAG
[ENA]
¡û
>W1810693419
QLLJ01000005
Betaproteobacteria
Duganella sp. GV066 [QLLJ]
320817
320901
+
Leu
CAG
[ENA]
¡û
>W1810693420
QLLJ01000005
Betaproteobacteria
Duganella sp. GV066 [QLLJ]
321098
321182
+
Leu
CAG
[ENA]
¡û
>W1810693421
QLLJ01000005
Betaproteobacteria
Duganella sp. GV066 [QLLJ]
321210
321294
+
Leu
CAG
[ENA]
¡û
>W1810694380
QLLZ01000005
Betaproteobacteria
Duganella sp. GV039 [QLLZ]
318943
319027
+
Leu
CAG
[ENA]
¡û
>W1810694381
QLLZ01000005
Betaproteobacteria
Duganella sp. GV039 [QLLZ]
320817
320901
+
Leu
CAG
[ENA]
¡û
>W1810694382
QLLZ01000005
Betaproteobacteria
Duganella sp. GV039 [QLLZ]
321098
321182
+
Leu
CAG
[ENA]
¡û
>W1810694383
QLLZ01000005
Betaproteobacteria
Duganella sp. GV039 [QLLZ]
321210
321294
+
Leu
CAG
[ENA]
¡û
>W1810787981
QREC01000005
Betaproteobacteria
Duganella sp. GV023 [QREC]
318943
319027
+
Leu
CAG
[ENA]
¡û
>W1810787982
QREC01000005
Betaproteobacteria
Duganella sp. GV023 [QREC]
320817
320901
+
Leu
CAG
[ENA]
¡û
>W1810787983
QREC01000005
Betaproteobacteria
Duganella sp. GV023 [QREC]
321098
321182
+
Leu
CAG
[ENA]
¡û
>W1810787984
QREC01000005
Betaproteobacteria
Duganella sp. GV023 [QREC]
321210
321294
+
Leu
CAG
[ENA]
¡û
>W1810885071
QUNB01000004
Betaproteobacteria
Duganella sp. GV032 [QUNB]
318943
319027
+
Leu
CAG
[ENA]
¡û
>W1810885072
QUNB01000004
Betaproteobacteria
Duganella sp. GV032 [QUNB]
320817
320901
+
Leu
CAG
[ENA]
¡û
>W1810885073
QUNB01000004
Betaproteobacteria
Duganella sp. GV032 [QUNB]
321098
321182
+
Leu
CAG
[ENA]
¡û
>W1810885074
QUNB01000004
Betaproteobacteria
Duganella sp. GV032 [QUNB]
321210
321294
+
Leu
CAG
[ENA]
¡û
>W1810885195
QUND01000005
Betaproteobacteria
Duganella sp. GV046 [QUND]
318943
319027
+
Leu
CAG
[ENA]
¡û
>W1810885196
QUND01000005
Betaproteobacteria
Duganella sp. GV046 [QUND]
320817
320901
+
Leu
CAG
[ENA]
¡û
>W1810885197
QUND01000005
Betaproteobacteria
Duganella sp. GV046 [QUND]
321098
321182
+
Leu
CAG
[ENA]
¡û
>W1810885198
QUND01000005
Betaproteobacteria
Duganella sp. GV046 [QUND]
321210
321294
+
Leu
CAG
[ENA]
¡û
>W1810885829
QUNP01000005
Betaproteobacteria
Duganella sp. GV038 [QUNP]
318943
319027
+
Leu
CAG
[ENA]
¡û
>W1810885830
QUNP01000005
Betaproteobacteria
Duganella sp. GV038 [QUNP]
320817
320901
+
Leu
CAG
[ENA]
¡û
>W1810885831
QUNP01000005
Betaproteobacteria
Duganella sp. GV038 [QUNP]
321098
321182
+
Leu
CAG
[ENA]
¡û
>W1810885832
QUNP01000005
Betaproteobacteria
Duganella sp. GV038 [QUNP]
321210
321294
+
Leu
CAG
[ENA]
¡û
>W1810886080
QUNU01000005
Betaproteobacteria
Duganella sp. GV067 [QUNU]
318943
319027
+
Leu
CAG
[ENA]
¡û
>W1810886081
QUNU01000005
Betaproteobacteria
Duganella sp. GV067 [QUNU]
320817
320901
+
Leu
CAG
[ENA]
¡û
>W1810886082
QUNU01000005
Betaproteobacteria
Duganella sp. GV067 [QUNU]
321098
321182
+
Leu
CAG
[ENA]
¡û
>W1810886083
QUNU01000005
Betaproteobacteria
Duganella sp. GV067 [QUNU]
321210
321294
+
Leu
CAG
[ENA]
¡û
>W1810887531
QUQN01000004
Betaproteobacteria
Herbaspirillum sp. 3R-3a1 [QUQN]
388088
388004
-
Leu
CAG
[ENA]
¡û
>W1810887532
QUQN01000004
Betaproteobacteria
Herbaspirillum sp. 3R-3a1 [QUQN]
387759
387675
-
Leu
CAG
[ENA]
¡û
>W1810908132
QVIL01000008
Betaproteobacteria
Duganella sp. BJB489 [QVIL]
333975
333891
-
Leu
CAG
[ENA]
¡û
>W1810908133
QVIL01000008
Betaproteobacteria
Duganella sp. BJB489 [QVIL]
333703
333619
-
Leu
CAG
[ENA]
¡û
>W1810908134
QVIL01000008
Betaproteobacteria
Duganella sp. BJB489 [QVIL]
331765
331681
-
Leu
CAG
[ENA]
¡û
>W1810908135
QVIL01000008
Betaproteobacteria
Duganella sp. BJB489 [QVIL]
331520
331436
-
Leu
CAG
[ENA]
¡û
>W1810908199
QVIM01000008
Betaproteobacteria
Duganella sp. BJB488 [QVIM]
333991
333907
-
Leu
CAG
[ENA]
¡û
>W1810908200
QVIM01000008
Betaproteobacteria
Duganella sp. BJB488 [QVIM]
333719
333635
-
Leu
CAG
[ENA]
¡û
>W1810908201
QVIM01000008
Betaproteobacteria
Duganella sp. BJB488 [QVIM]
331781
331697
-
Leu
CAG
[ENA]
¡û
>W1810908202
QVIM01000008
Betaproteobacteria
Duganella sp. BJB488 [QVIM]
331536
331452
-
Leu
CAG
[ENA]
¡û
>W1810908230
QVIN01000001
Betaproteobacteria
Duganella sp. BJB480 [QVIN]
363340
363256
-
Leu
CAG
[ENA]
¡û
>W1810908231
QVIN01000001
Betaproteobacteria
Duganella sp. BJB480 [QVIN]
363068
362984
-
Leu
CAG
[ENA]
¡û
>W1810908232
QVIN01000001
Betaproteobacteria
Duganella sp. BJB480 [QVIN]
361130
361046
-
Leu
CAG
[ENA]
¡û
>W1810908233
QVIN01000001
Betaproteobacteria
Duganella sp. BJB480 [QVIN]
360885
360801
-
Leu
CAG
[ENA]
¡û
>W1810908308
QVIO01000002
Betaproteobacteria
Duganella sp. BJB476 [QVIO]
295778
295862
+
Leu
CAG
[ENA]
¡û
>W1810908309
QVIO01000002
Betaproteobacteria
Duganella sp. BJB476 [QVIO]
298977
299061
+
Leu
CAG
[ENA]
¡û
>W1810908310
QVIO01000002
Betaproteobacteria
Duganella sp. BJB476 [QVIO]
299213
299297
+
Leu
CAG
[ENA]
¡û
>W1810908311
QVIO01000002
Betaproteobacteria
Duganella sp. BJB476 [QVIO]
299479
299563
+
Leu
CAG
[ENA]
¡û
>W1810908382
QVIP01000002
Betaproteobacteria
Duganella sp. BJB475 [QVIP]
530023
529939
-
Leu
CAG
[ENA]
¡û
>W1810908383
QVIP01000002
Betaproteobacteria
Duganella sp. BJB475 [QVIP]
526824
526740
-
Leu
CAG
[ENA]
¡û
>W1810908384
QVIP01000002
Betaproteobacteria
Duganella sp. BJB475 [QVIP]
526588
526504
-
Leu
CAG
[ENA]
¡û
>W1810908385
QVIP01000002
Betaproteobacteria
Duganella sp. BJB475 [QVIP]
526322
526238
-
Leu
CAG
[ENA]
¡û
>SRA1015552
SRR023846.108504
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
213
129
-
Leu
CAG
[SRA]
>SRA1016503
SRR023846.534704
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
101
17
-
Leu
CAG
[SRA]
>C151062622
CP009962
Betaproteobacteria
Collimonas arenae Cal35 [CP009962]
3019158
3019074
-
Leu
CAG
[Ensembl]
¡û
>C151062624
CP009962
Betaproteobacteria
Collimonas arenae Cal35 [CP009962]
2559201
2559117
-
Leu
CAG
[Ensembl]
¡û
>C151082389
CP011409
Betaproteobacteria
Herbaspirillum hiltneri N3 [CP011409]
2418432
2418348
-
Leu
CAG
-
¡û
>C151082390
CP011409
Betaproteobacteria
Herbaspirillum hiltneri N3 [CP011409]
2418106
2418022
-
Leu
CAG
-
¡û
>C151092597
CP012201
Betaproteobacteria
Massilia sp. NR 4-1 [CP012201]
2379061
2379145
+
Leu
CAG
-
¡û
>C151092598
CP012201
Betaproteobacteria
Massilia sp. NR 4-1 [CP012201]
2380489
2380573
+
Leu
CAG
-
¡û
>C151092599
CP012201
Betaproteobacteria
Massilia sp. NR 4-1 [CP012201]
2380609
2380693
+
Leu
CAG
-
¡û
>C151100155
HG322949
Betaproteobacteria
Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 [HG322949]
3420269
3420353
+
Leu
CAG
[Ensembl]
¡û
>C151100156
HG322949
Betaproteobacteria
Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 [HG322949]
3420680
3420764
+
Leu
CAG
[Ensembl]
¡û
>C151100157
HG322949
Betaproteobacteria
Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 [HG322949]
3420987
3421071
+
Leu
CAG
[Ensembl]
¡û
>C11105064
CP002745
Betaproteobacteria
Collimonas fungivorans Ter331 [CP002745]
2287653
2287737
+
Leu
CAG
[Ensembl]
¡û
>C11105066
CP002745
Betaproteobacteria
Collimonas fungivorans Ter331 [CP002745]
2800032
2800116
+
Leu
CAG
[Ensembl]
¡û
>W1511683761
LFLS01000001
Betaproteobacteria
Herbaspirillum autotrophicum IAM 14942 [LFLS]
25081
24997
-
Leu
CAG
[ENA]
¡û
>W1511683874
LFLU01000004
Betaproteobacteria
Herbaspirillum rhizosphaerae UMS-37 [LFLU]
278430
278514
+
Leu
CAG
[ENA]
¡û
>W1511683875
LFLU01000004
Betaproteobacteria
Herbaspirillum rhizosphaerae UMS-37 [LFLU]
278991
279075
+
Leu
CAG
[ENA]
¡û
>C161053585
CP013232
Betaproteobacteria
Collimonas fungivorans Ter6 [CP013232]
2568514
2568598
+
Leu
CAG
[Ensembl]
¡û
>C161053587
CP013232
Betaproteobacteria
Collimonas fungivorans Ter6 [CP013232]
3272321
3272405
+
Leu
CAG
[Ensembl]
¡û
>C161053664
CP013233
Betaproteobacteria
Collimonas arenae Ter10 [CP013233]
2054774
2054690
-
Leu
CAG
-
¡û
>C161053685
CP013234
Betaproteobacteria
Collimonas pratensis Ter91 [CP013234]
2548137
2548221
+
Leu
CAG
[Ensembl]
¡û
>C161053687
CP013234
Betaproteobacteria
Collimonas pratensis Ter91 [CP013234]
3150302
3150386
+
Leu
CAG
[Ensembl]
¡û
>C161053761
CP013235
Betaproteobacteria
Collimonas arenae Ter282 [CP013235]
2506037
2505953
-
Leu
CAG
[Ensembl]
¡û
>C161053762
CP013235
Betaproteobacteria
Collimonas arenae Ter282 [CP013235]
2055110
2055026
-
Leu
CAG
[Ensembl]
¡û
>C161053809
CP013236
Betaproteobacteria
Collimonas pratensis Ter291 [CP013236]
2991392
2991308
-
Leu
CAG
[Ensembl]
¡û
>C161053811
CP013236
Betaproteobacteria
Collimonas pratensis Ter291 [CP013236]
2447384
2447300
-
Leu
CAG
[Ensembl]
¡û
>WENV057634
AACY023300883
Marine microbial communities from Global Ocean Sampling (GOS)
126
210
+
Leu
CAG
[ENA]
>W121086367
AKJW01000021
Betaproteobacteria
Herbaspirillum sp. CF444 [AKJW]
42362
42278
-
Leu
CAG
[ENA]
¡û
>W121086368
AKJW01000021
Betaproteobacteria
Herbaspirillum sp. CF444 [AKJW]
41805
41721
-
Leu
CAG
[ENA]
¡û
>W1610722991
LMDB01000002
Betaproteobacteria
Duganella sp. Root336D2 [LMDB]
98092
98008
-
Leu
CAG
[ENA]
¡û
>W1610722992
LMDB01000002
Betaproteobacteria
Duganella sp. Root336D2 [LMDB]
96709
96625
-
Leu
CAG
[ENA]
¡û
>W1610722993
LMDB01000002
Betaproteobacteria
Duganella sp. Root336D2 [LMDB]
92462
92378
-
Leu
CAG
[ENA]
¡û
>W1610722994
LMDB01000002
Betaproteobacteria
Duganella sp. Root336D2 [LMDB]
92344
92260
-
Leu
CAG
[ENA]
¡û
>W1610723398
LMDJ01000012
Betaproteobacteria
Massilia sp. Root351 [LMDJ]
160786
160870
+
Leu
CAG
[ENA]
¡û
>W1610723399
LMDJ01000012
Betaproteobacteria
Massilia sp. Root351 [LMDJ]
162172
162256
+
Leu
CAG
[ENA]
¡û
>W1610723400
LMDJ01000012
Betaproteobacteria
Massilia sp. Root351 [LMDJ]
162399
162483
+
Leu
CAG
[ENA]
¡û
>W1610723401
LMDJ01000012
Betaproteobacteria
Massilia sp. Root351 [LMDJ]
162524
162608
+
Leu
CAG
[ENA]
¡û
>W1610723402
LMDJ01000012
Betaproteobacteria
Massilia sp. Root351 [LMDJ]
164324
164408
+
Leu
CAG
[ENA]
¡û
>W1610723403
LMDJ01000012
Betaproteobacteria
Massilia sp. Root351 [LMDJ]
164426
164510
+
Leu
CAG
[ENA]
¡û
>W1610724428
LMEC01000026
Betaproteobacteria
Massilia sp. Root418 [LMEC]
145770
145854
+
Leu
CAG
[ENA]
¡û
>W1610724429
LMEC01000026
Betaproteobacteria
Massilia sp. Root418 [LMEC]
147171
147255
+
Leu
CAG
[ENA]
¡û
>W1610724430
LMEC01000026
Betaproteobacteria
Massilia sp. Root418 [LMEC]
147418
147502
+
Leu
CAG
[ENA]
¡û
>W1610724431
LMEC01000026
Betaproteobacteria
Massilia sp. Root418 [LMEC]
147543
147627
+
Leu
CAG
[ENA]
¡û
>W1610724432
LMEC01000026
Betaproteobacteria
Massilia sp. Root418 [LMEC]
149316
149400
+
Leu
CAG
[ENA]
¡û
>W1610726925
LMFZ01000003
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
57422
57338
-
Leu
CAG
[ENA]
¡û
>W1610726926
LMFZ01000003
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
57304
57220
-
Leu
CAG
[ENA]
¡û
>W1610729590
LMIC01000034
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
104518
104434
-
Leu
CAG
[ENA]
¡û
>W1610729591
LMIC01000034
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
103135
103051
-
Leu
CAG
[ENA]
¡û
>W1610729592
LMIC01000034
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
98888
98804
-
Leu
CAG
[ENA]
¡û
>W1610729593
LMIC01000034
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
98770
98686
-
Leu
CAG
[ENA]
¡û
>W1610734108
LMLM01000002
Betaproteobacteria
Duganella sp. Leaf61 [LMLM]
27423
27507
+
Leu
CAG
[ENA]
¡û
>W1610734110
LMLM01000002
Betaproteobacteria
Duganella sp. Leaf61 [LMLM]
27780
27864
+
Leu
CAG
[ENA]
¡û
>W1610734111
LMLM01000002
Betaproteobacteria
Duganella sp. Leaf61 [LMLM]
27870
27954
+
Leu
CAG
[ENA]
¡û
>W1610734112
LMLM01000002
Betaproteobacteria
Duganella sp. Leaf61 [LMLM]
28135
28219
+
Leu
CAG
[ENA]
¡û
>W1610734113
LMLM01000002
Betaproteobacteria
Duganella sp. Leaf61 [LMLM]
28235
28319
+
Leu
CAG
[ENA]
¡û
>W1610737085
LMNW01000003
Betaproteobacteria
Duganella sp. Leaf126 [LMNW]
255215
255131
-
Leu
CAG
[ENA]
¡û
>W1610737086
LMNW01000003
Betaproteobacteria
Duganella sp. Leaf126 [LMNW]
255115
255031
-
Leu
CAG
[ENA]
¡û
>W1610737087
LMNW01000003
Betaproteobacteria
Duganella sp. Leaf126 [LMNW]
254826
254742
-
Leu
CAG
[ENA]
¡û
>W1610737088
LMNW01000003
Betaproteobacteria
Duganella sp. Leaf126 [LMNW]
254730
254646
-
Leu
CAG
[ENA]
¡û
>W1610737089
LMNW01000003
Betaproteobacteria
Duganella sp. Leaf126 [LMNW]
247506
247422
-
Leu
CAG
[ENA]
¡û
>W1610753724
LNEU01000015
Betaproteobacteria
Burkholderiales bacterium Ga0077544 [LNEU]
97732
97648
-
Leu
CAG
[ENA]
¡û
>W1710515859
FNCD01000004
Betaproteobacteria
Duganella sp. OV458 [FNCD]
234448
234364
-
Leu
CAG
[ENA]
¡û
>W1710515860
FNCD01000004
Betaproteobacteria
Duganella sp. OV458 [FNCD]
232593
232509
-
Leu
CAG
[ENA]
¡û
>W1710515862
FNCD01000004
Betaproteobacteria
Duganella sp. OV458 [FNCD]
231408
231324
-
Leu
CAG
[ENA]
¡û
>W1710519299
FNEQ01000005
Betaproteobacteria
Duganella sp. OV510 [FNEQ]
225947
226031
+
Leu
CAG
[ENA]
¡û
>W1710519300
FNEQ01000005
Betaproteobacteria
Duganella sp. OV510 [FNEQ]
227802
227886
+
Leu
CAG
[ENA]
¡û
>W1710519302
FNEQ01000005
Betaproteobacteria
Duganella sp. OV510 [FNEQ]
228987
229071
+
Leu
CAG
[ENA]
¡û
>W1710530372
FNOR01000014
Betaproteobacteria
Collimonas sp. OK242 [FNOR]
2997
2913
-
Leu
CAG
[ENA]
¡û
>W1710530381
FNOR01000022
Betaproteobacteria
Collimonas sp. OK242 [FNOR]
46962
46878
-
Leu
CAG
[ENA]
¡û
>W1710545153
FOBG01000001
Betaproteobacteria
Duganella sp. CF402 [FOBG]
485877
485793
-
Leu
CAG
[ENA]
¡û
>W1710545154
FOBG01000001
Betaproteobacteria
Duganella sp. CF402 [FOBG]
484003
483919
-
Leu
CAG
[ENA]
¡û
>W1710545156
FOBG01000001
Betaproteobacteria
Duganella sp. CF402 [FOBG]
481807
481723
-
Leu
CAG
[ENA]
¡û
>W1710547596
FODC01000004
Betaproteobacteria
Duganella sp. CF517 [FODC]
356365
356281
-
Leu
CAG
[ENA]
¡û
>W1710547597
FODC01000004
Betaproteobacteria
Duganella sp. CF517 [FODC]
354364
354280
-
Leu
CAG
[ENA]
¡û
>W1710547598
FODC01000004
Betaproteobacteria
Duganella sp. CF517 [FODC]
354083
353999
-
Leu
CAG
[ENA]
¡û
>W1710556433
FOKF01000001
Betaproteobacteria
Collimonas sp. OK607 [FOKF]
271292
271376
+
Leu
CAG
[ENA]
¡û
>W1710556454
FOKF01000018
Betaproteobacteria
Collimonas sp. OK607 [FOKF]
76632
76548
-
Leu
CAG
[ENA]
¡û
>W1710557513
FOLC01000001
Betaproteobacteria
Collimonas sp. OK412 [FOLC]
432106
432190
+
Leu
CAG
[ENA]
¡û
>W1710557520
FOLC01000003
Betaproteobacteria
Collimonas sp. OK412 [FOLC]
36166
36250
+
Leu
CAG
[ENA]
¡û
>W1710564203
FOQI01000001
Betaproteobacteria
Collimonas sp. OK307 [FOQI]
377345
377429
+
Leu
CAG
[ENA]
¡û
>W1710564223
FOQI01000010
Betaproteobacteria
Collimonas sp. OK307 [FOQI]
37960
37876
-
Leu
CAG
[ENA]
¡û
>W1710568811
FOTW01000014
Betaproteobacteria
Rugamonas rubra [FOTW]
156353
156269
-
Leu
CAG
[ENA]
¡û
>W1710578399
FPBO01000015
Betaproteobacteria
Pseudoduganella namucuonensis [FPBO]
98045
98129
+
Leu
CAG
[ENA]
¡û
>W1710578400
FPBO01000015
Betaproteobacteria
Pseudoduganella namucuonensis [FPBO]
98290
98374
+
Leu
CAG
[ENA]
¡û
>W1710578401
FPBO01000015
Betaproteobacteria
Pseudoduganella namucuonensis [FPBO]
99895
99979
+
Leu
CAG
[ENA]
¡û
>W1710578402
FPBO01000015
Betaproteobacteria
Pseudoduganella namucuonensis [FPBO]
100016
100100
+
Leu
CAG
[ENA]
¡û
>W1710585997
FQWU01000002
Betaproteobacteria
Massilia sp. CF038 [FQWU]
378922
379006
+
Leu
CAG
[ENA]
¡û
>W1710585998
FQWU01000002
Betaproteobacteria
Massilia sp. CF038 [FQWU]
379111
379195
+
Leu
CAG
[ENA]
¡û
>W1710593024
FRCX01000007
Betaproteobacteria
Duganella sacchari [FRCX]
442809
442725
-
Leu
CAG
[ENA]
¡û
>W1710593025
FRCX01000007
Betaproteobacteria
Duganella sacchari [FRCX]
442506
442422
-
Leu
CAG
[ENA]
¡û
>W1710593026
FRCX01000007
Betaproteobacteria
Duganella sacchari [FRCX]
441443
441359
-
Leu
CAG
[ENA]
¡û
>W1710593027
FRCX01000007
Betaproteobacteria
Duganella sacchari [FRCX]
441330
441246
-
Leu
CAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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