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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
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|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.188464 (241 seq.)
>W1710799883
LJVG01000014
Gammaproteobacteria
Colwellia sp. MT2012 [LJVG]
99175
99099
-
Trp
CCA
[ENA]
¡û
>W1710799948
LJVG01000044
Gammaproteobacteria
Colwellia sp. MT2012 [LJVG]
192077
192001
-
Trp
CCA
[ENA]
¡û
>W1711055122
LRUI01000013
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [LRUI]
16995
16919
-
Trp
CCA
[ENA]
¡û
>W1711055130
LRUI01000018
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [LRUI]
7951
8027
+
Trp
CCA
[ENA]
¡û
>W1711078258
LSMS01000001
Gammaproteobacteria
Colwellia sp. Phe_37 [LSMS]
1377
1301
-
Trp
CCA
[ENA]
¡û
>W1711624649
MPHL01000004
Gammaproteobacteria
Colwellia sp. UCD-KL20 [MPHL]
179051
179127
+
Trp
CCA
[ENA]
¡û
>W1711767473
MUZV01000009
Gammaproteobacteria
Cognaticolwellia aestuarii [MUZV]
107337
107261
-
Trp
CCA
[ENA]
¡û
>W1711947514
NBOD01000008
Gammaproteobacteria
Cognaticolwellia aestuarii [NBOD]
98711
98787
+
Trp
CCA
[ENA]
¡û
>W1711947630
NBOF01000002
Gammaproteobacteria
Cognaticolwellia mytili [NBOF]
120505
120581
+
Trp
CCA
[ENA]
¡û
>W1711947721
NBOG01000004
Gammaproteobacteria
Cognaticolwellia sediminilitoris [NBOG]
244193
244269
+
Trp
CCA
[ENA]
¡û
>C171034496
CP014943
Gammaproteobacteria
Colwellia sp. PAMC 21821 [CP014943]
3367662
3367586
-
Trp
CCA
-
¡û
>C171066060
CP017689
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [CP017689]
451053
451129
+
Trp
CCA
-
¡û
>C171066093
CP017689
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [CP017689]
2992235
2992311
+
Trp
CCA
-
¡û
>C171118298
CP021376
Gammaproteobacteria
Oceanisphaera avium AMac2203 [CP021376]
1645696
1645620
-
Trp
CCA
-
¡û
>C171118352
CP021377
Gammaproteobacteria
Oceanisphaera profunda SM1222 [CP021377]
2403535
2403611
+
Trp
CCA
-
¡û
>C006827
CP000083
Gammaproteobacteria
Colwellia psychrerythraea 34H 34H; BAA-681 [CP000083]
5064160
5064084
-
Trp
CCA
[Ensembl]
¡û
>C006859
CP000083
Gammaproteobacteria
Colwellia psychrerythraea 34H 34H; BAA-681 [CP000083]
1139363
1139287
-
Trp
CCA
[Ensembl]
¡û
>WENV182540163
OJAE01000058
[OJAE] seawater metagenome; Sea water
1905
1981
+
Trp
CCA
[ENA]
¡û
>WENV182540211
OJAF01000137
[OJAF] seawater metagenome; Sea water
1306
1382
+
Trp
CCA
[ENA]
¡û
>WENV182542018
OJAV01000308
[OJAV] seawater metagenome; Sea water
7608
7532
-
Trp
CCA
[ENA]
¡û
>WENV182542709
OJAZ01000911
[OJAZ] seawater metagenome; Sea water
2485
2409
-
Trp
CCA
[ENA]
¡û
>WENV182542734
OJAZ01001350
[OJAZ] seawater metagenome; Sea water
7043
6967
-
Trp
CCA
[ENA]
¡û
>WENV182542906
OJAZ01006583
[OJAZ] seawater metagenome; Sea water
1683
1607
-
Trp
CCA
[ENA]
¡û
>WENV182543406
OJBB01000050
[OJBB] seawater metagenome; Sea water
52355
52279
-
Trp
CCA
[ENA]
¡û
>WENV182543505
OJBB01001391
[OJBB] seawater metagenome; Sea water
516
592
+
Trp
CCA
[ENA]
¡û
>WENV182543521
OJBB01002083
[OJBB] seawater metagenome; Sea water
590
666
+
Trp
CCA
[ENA]
¡û
>WENV182544571
OJBI01000007
[OJBI] seawater metagenome; Sea water
109840
109916
+
Trp
CCA
[ENA]
¡û
>WENV182545198
OJBM01008151
[OJBM] seawater metagenome; Sea water
113
37
-
Trp
CCA
[ENA]
¡û
>WENV182546417
OJBO01024011
[OJBO] seawater metagenome; Sea water
60
136
+
Trp
CCA
[ENA]
¡û
>WENV182546979
OJBR01000042
[OJBR] seawater metagenome; Sea water
61734
61658
-
Trp
CCA
[ENA]
¡û
>WENV182547186
OJBR01006434
[OJBR] seawater metagenome; Sea water
82
158
+
Trp
CCA
[ENA]
¡û
>WENV182547499
OJBS01012771
[OJBS] seawater metagenome; Sea water
756
680
-
Trp
CCA
[ENA]
¡û
>WENV182549861
OJBZ01000134
[OJBZ] seawater metagenome; Sea water
4919
4843
-
Trp
CCA
[ENA]
¡û
>WENV182549879
OJBZ01000218
[OJBZ] seawater metagenome; Sea water
2276
2200
-
Trp
CCA
[ENA]
¡û
>WENV182554645
OJCW01000361
[OJCW] seawater metagenome; Sea water
5315
5239
-
Trp
CCA
[ENA]
¡û
>WENV182554664
OJCW01000700
[OJCW] seawater metagenome; Sea water
5315
5239
-
Trp
CCA
[ENA]
¡û
>WENV182556854
OJDH01000335
[OJDH] seawater metagenome; Sea water
6247
6171
-
Trp
CCA
[ENA]
¡û
>WENV182558606
OJDN01000010
[OJDN] seawater metagenome; Sea water
17240
17164
-
Trp
CCA
[ENA]
¡û
>WENV182558796
OJDN01003760
[OJDN] seawater metagenome; Sea water
2191
2115
-
Trp
CCA
[ENA]
¡û
>WENV182559098
OJDO01001156
[OJDO] seawater metagenome; Sea water
3816
3740
-
Trp
CCA
[ENA]
¡û
>WENV182559965
OJDR01000034
[OJDR] seawater metagenome; Sea water
55620
55696
+
Trp
CCA
[ENA]
¡û
>WENV182560233
OJDT01011740
[OJDT] seawater metagenome; Sea water
658
582
-
Trp
CCA
[ENA]
¡û
>WENV182560436
OJDU01001077
[OJDU] seawater metagenome; Sea water
1584
1508
-
Trp
CCA
[ENA]
¡û
>WENV182562230
OJDZ01000148
[OJDZ] seawater metagenome; Sea water
44043
44119
+
Trp
CCA
[ENA]
¡û
>WENV182562377
OJDZ01001616
[OJDZ] seawater metagenome; Sea water
3574
3650
+
Trp
CCA
[ENA]
¡û
>WENV182565161
OJEH01000061
[OJEH] seawater metagenome; Sea water
6311
6387
+
Trp
CCA
[ENA]
¡û
>WENV182565824
OJEI01000031
[OJEI] seawater metagenome; Sea water
4771
4695
-
Trp
CCA
[ENA]
¡û
>WENV182567207
OJEN01013963
[OJEN] seawater metagenome; Sea water
608
532
-
Trp
CCA
[ENA]
¡û
>WENV182567477
OJEO01001915
[OJEO] seawater metagenome; Sea water
1835
1759
-
Trp
CCA
[ENA]
¡û
>WENV182567547
OJEO01006203
[OJEO] seawater metagenome; Sea water
793
869
+
Trp
CCA
[ENA]
¡û
>WENV182567670
OJEP01000041
[OJEP] seawater metagenome; Sea water
50801
50725
-
Trp
CCA
[ENA]
¡û
>WENV182568189
OJER01000780
[OJER] seawater metagenome; Sea water
178
102
-
Trp
CCA
[ENA]
¡û
>WENV182568274
OJET01000018
[OJET] seawater metagenome; Sea water
27217
27293
+
Trp
CCA
[ENA]
¡û
>WENV182568864
OJEX01000229
[OJEX] seawater metagenome; Sea water
80
4
-
Trp
CCA
[ENA]
¡û
>WENV182575118
OJFU01000003
[OJFU] seawater metagenome; Sea water
20668
20592
-
Trp
CCA
[ENA]
¡û
>WENV182575509
OJFV01000011
[OJFV] seawater metagenome; Sea water
190984
190908
-
Trp
CCA
[ENA]
¡û
>WENV182575897
OJFX01000201
[OJFX] seawater metagenome; Sea water
11824
11748
-
Trp
CCA
[ENA]
¡û
>WENV182577400
OJGE01000246
[OJGE] seawater metagenome; Sea water
1952
2028
+
Trp
CCA
[ENA]
¡û
>WENV182578558
OJGO01001093
[OJGO] seawater metagenome; Sea water
4595
4671
+
Trp
CCA
[ENA]
¡û
>WENV182578559
OJGO01001119
[OJGO] seawater metagenome; Sea water
5686
5610
-
Trp
CCA
[ENA]
¡û
>WENV182578582
OJGO01001691
[OJGO] seawater metagenome; Sea water
2077
2153
+
Trp
CCA
[ENA]
¡û
>WENV182578801
OJGP01003609
[OJGP] seawater metagenome; Sea water
109
185
+
Trp
CCA
[ENA]
¡û
>WENV182578846
OJGP01006861
[OJGP] seawater metagenome; Sea water
1182
1106
-
Trp
CCA
[ENA]
¡û
>WENV182579693
OJGT01000007
[OJGT] seawater metagenome; Sea water
65927
65851
-
Trp
CCA
[ENA]
¡û
>WENV182580819
OJGW01015156
[OJGW] seawater metagenome; Sea water
1237
1313
+
Trp
CCA
[ENA]
¡û
>WENV182584428
OJHG01000219
[OJHG] seawater metagenome; Sea water
1593
1517
-
Trp
CCA
[ENA]
¡û
>WENV182585371
OJHH01013460
[OJHH] seawater metagenome; Sea water
485
409
-
Trp
CCA
[ENA]
¡û
>WENV182585376
OJHH01013941
[OJHH] seawater metagenome; Sea water
855
779
-
Trp
CCA
[ENA]
¡û
>WENV182586461
OJHK01000532
[OJHK] seawater metagenome; Sea water
995
919
-
Trp
CCA
[ENA]
¡û
>WENV182586587
OJHK01001526
[OJHK] seawater metagenome; Sea water
9007
9083
+
Trp
CCA
[ENA]
¡û
>WENV182587993
OJHO01000623
[OJHO] seawater metagenome; Sea water
8158
8234
+
Trp
CCA
[ENA]
¡û
>WENV182588215
OJHP01001798
[OJHP] seawater metagenome; Sea water
113
189
+
Trp
CCA
[ENA]
¡û
>WENV182588311
OJHR01001300
[OJHR] seawater metagenome; Sea water
1250
1174
-
Trp
CCA
[ENA]
¡û
>WENV182590611
OJIJ01000364
[OJIJ] seawater metagenome; Sea water
3511
3435
-
Trp
CCA
[ENA]
¡û
>WENV182592519
OJIR01002406
[OJIR] seawater metagenome; Sea water
441
517
+
Trp
CCA
[ENA]
¡û
>WENV182592531
OJIR01002897
[OJIR] seawater metagenome; Sea water
410
486
+
Trp
CCA
[ENA]
¡û
>WENV182594291
OJIV01003100
[OJIV] seawater metagenome; Sea water
819
743
-
Trp
CCA
[ENA]
¡û
>WENV183053722
OLGQ01000833
[OLGQ] seawater metagenome; Sea water
71
147
+
Trp
CCA
[ENA]
¡û
>WENV183055484
OLHD01000016
[OLHD] seawater metagenome; Sea water
7261
7337
+
Trp
CCA
[ENA]
¡û
>WENV183055679
OLHF01000033
[OLHF] seawater metagenome; Sea water
36263
36187
-
Trp
CCA
[ENA]
¡û
>WENV183056158
OLHI01000442
[OLHI] seawater metagenome; Sea water
398
474
+
Trp
CCA
[ENA]
¡û
>WENV183056373
OLHI01017251
[OLHI] seawater metagenome; Sea water
477
553
+
Trp
CCA
[ENA]
¡û
>WENV183057660
OLHM01000288
[OLHM] seawater metagenome; Sea water
15149
15073
-
Trp
CCA
[ENA]
¡û
>WENV183057718
OLHM01001333
[OLHM] seawater metagenome; Sea water
440
516
+
Trp
CCA
[ENA]
¡û
>WENV183057777
OLHM01004218
[OLHM] seawater metagenome; Sea water
672
596
-
Trp
CCA
[ENA]
¡û
>WENV183057977
OLHN01000315
[OLHN] seawater metagenome; Sea water
8434
8358
-
Trp
CCA
[ENA]
¡û
>WENV183060006
OLHW01003641
[OLHW] seawater metagenome; Sea water
562
638
+
Trp
CCA
[ENA]
¡û
>WENV183064714
OLII01000101
[OLII] seawater metagenome; Sea water
20205
20129
-
Trp
CCA
[ENA]
¡û
>WENV183064819
OLII01000998
[OLII] seawater metagenome; Sea water
9486
9410
-
Trp
CCA
[ENA]
¡û
>WENV183064883
OLII01002153
[OLII] seawater metagenome; Sea water
1388
1464
+
Trp
CCA
[ENA]
¡û
>WENV183522181
OMOM01000497
[OMOM] seawater metagenome; Sea water
16503
16427
-
Trp
CCA
[ENA]
¡û
>WENV170537170
CEWQ01018915
[CEWQ] marine metagenome genome assembly TARA_085_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
430
506
+
Trp
CCA
[ENA]
¡û
>WENV170537888
CEWR01036576
[CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
1324
1248
-
Trp
CCA
[ENA]
¡û
>WENV170568770
FLMP01076310
[FLMP] seawater metagenome; seawater
730
654
-
Trp
CCA
[ENA]
¡û
>WENV170609999
FUWD011620666
[FUWD] metagenome; unknown
86
10
-
Trp
CCA
[ENA]
¡û
>WENV170704246
LLEJ01000546
[LLEJ] bioreactor metagenome; day101 10degC chemostat 2011 inoculated with Wadden Sea sediment taken from the upper 2 cm of the
2504
2580
+
Trp
CCA
[ENA]
¡û
>WENV170704255
LLEJ01000658
[LLEJ] bioreactor metagenome; day101 10degC chemostat 2011 inoculated with Wadden Sea sediment taken from the upper 2 cm of the
1674
1750
+
Trp
CCA
[ENA]
¡û
>WENV170704828
LLEN01001433
[LLEN] bioreactor metagenome; day86 10degC chemostat 2012 inoculated with Wadden Sea sediment taken from the upper 2 cm of the
287
211
-
Trp
CCA
[ENA]
¡û
>WENV170780336
MAAA01029006
[MAAA] seawater metagenome; sample BD02T6 sea water enriched with oil for 6 days
805
881
+
Trp
CCA
[ENA]
¡û
>WENV170780338
MAAA01029100
[MAAA] seawater metagenome; sample BD02T6 sea water enriched with oil for 6 days
326
250
-
Trp
CCA
[ENA]
¡û
>WENV170780987
MAAB01028919
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
9250
9174
-
Trp
CCA
[ENA]
¡û
>WENV170780997
MAAB01028929
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
369
445
+
Trp
CCA
[ENA]
¡û
>WENV170781000
MAAB01028988
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
32567
32491
-
Trp
CCA
[ENA]
¡û
>WENV170781038
MAAB01029158
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
815
891
+
Trp
CCA
[ENA]
¡û
>WENV170781071
MAAB01029285
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
9433
9357
-
Trp
CCA
[ENA]
¡û
>WENV170781076
MAAB01029319
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
620
696
+
Trp
CCA
[ENA]
¡û
>WENV170781082
MAAB01029361
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
45561
45485
-
Trp
CCA
[ENA]
¡û
>WENV170781136
MAAB01029459
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
4172
4096
-
Trp
CCA
[ENA]
¡û
>WENV170781168
MAAB01029584
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
14487
14563
+
Trp
CCA
[ENA]
¡û
>WENV170781171
MAAB01029596
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
51668
51744
+
Trp
CCA
[ENA]
¡û
>WENV170781239
MAAB01030070
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
4667
4591
-
Trp
CCA
[ENA]
¡û
>WENV170781243
MAAB01030100
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
6301
6225
-
Trp
CCA
[ENA]
¡û
>WENV170781274
MAAB01030508
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
3860
3936
+
Trp
CCA
[ENA]
¡û
>WENV170781295
MAAB01031336
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
1710
1634
-
Trp
CCA
[ENA]
¡û
>WENV170781615
MAAB01038758
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
13415
13339
-
Trp
CCA
[ENA]
¡û
>WENV170782070
MAAC01007937
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
2026
1950
-
Trp
CCA
[ENA]
¡û
>WENV170782439
MAAC01009940
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
22015
22091
+
Trp
CCA
[ENA]
¡û
>WENV170782475
MAAC01010137
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
4845
4769
-
Trp
CCA
[ENA]
¡û
>WENV170782494
MAAC01010168
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
284
360
+
Trp
CCA
[ENA]
¡û
>WENV170782515
MAAC01010176
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
124620
124696
+
Trp
CCA
[ENA]
¡û
>WENV170782908
MAAC01012042
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
490
566
+
Trp
CCA
[ENA]
¡û
>WENV170782915
MAAC01012072
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
2021
1945
-
Trp
CCA
[ENA]
¡û
>WENV170782955
MAAC01012159
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
338
414
+
Trp
CCA
[ENA]
¡û
>WENV170783129
MAAC01013907
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
9823
9747
-
Trp
CCA
[ENA]
¡û
>WENV170783143
MAAC01014266
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
1785
1709
-
Trp
CCA
[ENA]
¡û
>WENV170783146
MAAC01014317
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
76
1
-
Trp
CCA
[ENA]
¡û
>WENV170783168
MAAC01014634
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
274
350
+
Trp
CCA
[ENA]
¡û
>WENV170783196
MAAC01014827
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
19217
19141
-
Trp
CCA
[ENA]
¡û
>WENV170783219
MAAC01015067
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
1915
1991
+
Trp
CCA
[ENA]
¡û
>WENV170783225
MAAC01015099
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
6540
6616
+
Trp
CCA
[ENA]
¡û
>WENV170783233
MAAC01015210
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
39
115
+
Trp
CCA
[ENA]
¡û
>WENV170783657
MAAC01018341
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
16846
16770
-
Trp
CCA
[ENA]
¡û
>WENV170783673
MAAC01018361
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
6457
6533
+
Trp
CCA
[ENA]
¡û
>WENV170783979
MAAC01020240
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
77
1
-
Trp
CCA
[ENA]
¡û
>WENV170822139
MDSY01034562
[MDSY] marine metagenome; seawater
3288
3363
+
Trp
CCA
[ENA]
¡û
>C181169938
CP028924
Gammaproteobacteria
Colwellia sp. Arc7-D [CP028924]
2994548
2994624
+
Trp
CCA
-
¡û
>C191130458
CP034759
Gammaproteobacteria
Litorilituus sediminis JCM 17549 [CP034759]
1513905
1513981
+
Trp
CCA
-
¡û
>C191130481
CP034759
Gammaproteobacteria
Litorilituus sediminis JCM 17549 [CP034759]
2217677
2217601
-
Trp
CCA
-
¡û
>C191160586
CP038493
Gammaproteobacteria
Thalassotalea sp. HSM 43 [CP038493]
2902041
2901965
-
Trp
CCA
-
¡û
>C191160591
CP038493
Gammaproteobacteria
Thalassotalea sp. HSM 43 [CP038493]
1454480
1454404
-
Trp
CCA
-
¡û
>W1911585078
PIPQ01000001
Gammaproteobacteria
Aliidiomarina taiwanensis AIT1 [PIPQ]
196135
196211
+
Trp
CCA
[ENA]
¡û
>W1911585101
PIPQ01000002
Gammaproteobacteria
Aliidiomarina taiwanensis AIT1 [PIPQ]
164950
165026
+
Trp
CCA
[ENA]
¡û
>W1911770189
QXIO01000001
Gammaproteobacteria
Colwellia sp. RSH04 [QXIO]
124142
124218
+
Trp
CCA
[ENA]
¡û
>W1911770250
QXIO01000020
Gammaproteobacteria
Colwellia sp. RSH04 [QXIO]
508
584
+
Trp
CCA
[ENA]
¡û
>W1911811000
QZCH01000001
Gammaproteobacteria
Motilimonas sp. PLHSC7-2 [QZCH]
394551
394475
-
Trp
CCA
[ENA]
¡û
>W1911811062
QZCH01000048
Gammaproteobacteria
Motilimonas sp. PLHSC7-2 [QZCH]
12393
12317
-
Trp
CCA
[ENA]
¡û
>W1810155072
PJAI01000015
Gammaproteobacteria
Colwellia echini A3T [PJAI]
185170
185094
-
Trp
CCA
[ENA]
¡û
>W1810155094
PJAI01000058
Gammaproteobacteria
Colwellia echini A3T [PJAI]
19039
18963
-
Trp
CCA
[ENA]
¡û
>W1810155381
PJAQ01000066
Gammaproteobacteria
Colwellia sp. 12G3 [PJAQ]
548631
548555
-
Trp
CCA
[ENA]
¡û
>W1810155386
PJAQ01000067
Gammaproteobacteria
Colwellia sp. 12G3 [PJAQ]
22521
22445
-
Trp
CCA
[ENA]
¡û
>W1810155537
PJAU01000031
Gammaproteobacteria
Colwellia sp. 75C3 [PJAU]
265654
265578
-
Trp
CCA
[ENA]
¡û
>W1810155596
PJAU01000059
Gammaproteobacteria
Colwellia sp. 75C3 [PJAU]
359374
359450
+
Trp
CCA
[ENA]
¡û
>W1810155967
PJBA01000001
Gammaproteobacteria
Colwellia sp. Bg11-28 [PJBA]
200608
200684
+
Trp
CCA
[ENA]
¡û
>W1810156044
PJBA01000018
Gammaproteobacteria
Colwellia sp. Bg11-28 [PJBA]
1087590
1087514
-
Trp
CCA
[ENA]
¡û
>W1810701349
QMED01000006
Gammaproteobacteria
Algibacillus agarilyticus RQJ05 [QMED]
15191
15115
-
Trp
CCA
[ENA]
¡û
>W1810701378
QMED01000052
Gammaproteobacteria
Algibacillus agarilyticus RQJ05 [QMED]
16655
16579
-
Trp
CCA
[ENA]
¡û
>W1810735861
QOLD01000016
Gammaproteobacteria
Candidatus Colwellia aromaticivorans Bin11-node4 [QOLD]
16428
16352
-
Trp
CCA
[ENA]
¡û
>W1810735905
QOLD01000070
Gammaproteobacteria
Candidatus Colwellia aromaticivorans Bin11-node4 [QOLD]
41580
41656
+
Trp
CCA
[ENA]
¡û
>W1810758132
QPID01000017
Gammaproteobacteria
Corallincola holothuriorum C4 [QPID]
4925
5001
+
Trp
CCA
[ENA]
¡û
>W2010688828
JACGUR010000167
Gammaproteobacteria
Colwellia sp. MB3u-64 [JACGUR]
236850
236926
+
Trp
CCA
[ENA]
¡û
>W2010688855
JACGUS010000077
Gammaproteobacteria
Colwellia sp. MB3u-55 [JACGUS]
5203
5127
-
Trp
CCA
[ENA]
¡û
>W2010688966
JACGUT010000084
Gammaproteobacteria
Colwellia sp. MB3u-41 [JACGUT]
377217
377141
-
Trp
CCA
[ENA]
¡û
>W2010688995
JACGUU010000063
Gammaproteobacteria
Colwellia sp. MB3u-28 [JACGUU]
377214
377138
-
Trp
CCA
[ENA]
¡û
>W2010689093
JACGUV010000219
Gammaproteobacteria
Colwellia sp. MB3u-22 [JACGUV]
299619
299543
-
Trp
CCA
[ENA]
¡û
>W2010689105
JACGUW010000010
Gammaproteobacteria
Colwellia sp. MB02u-7 [JACGUW]
302814
302738
-
Trp
CCA
[ENA]
¡û
>W2010689213
JACGUX010000087
Gammaproteobacteria
Colwellia sp. MB02u-14 [JACGUX]
315828
315904
+
Trp
CCA
[ENA]
¡û
>W2010689309
JACGUZ010000056
Gammaproteobacteria
Colwellia sp. Bg11-12 [JACGUZ]
192280
192204
-
Trp
CCA
[ENA]
¡û
>W2010689412
JACGVA010000062
Gammaproteobacteria
Colwellia sp. MB3u-8 [JACGVA]
105404
105480
+
Trp
CCA
[ENA]
¡û
>W2010689486
JACGVB010000091
Gammaproteobacteria
Colwellia sp. MB3u-70 [JACGVB]
105404
105480
+
Trp
CCA
[ENA]
¡û
>W2010689548
JACGVC010000045
Gammaproteobacteria
Colwellia sp. MB3u-45 [JACGVC]
69558
69482
-
Trp
CCA
[ENA]
¡û
>W2010689617
JACGVD010000073
Gammaproteobacteria
Colwellia sp. MB3u-43 [JACGVD]
38456
38380
-
Trp
CCA
[ENA]
¡û
>W2010689742
JACGVF010000066
Gammaproteobacteria
Colwellia sp. MB02u-9 [JACGVF]
15182
15258
+
Trp
CCA
[ENA]
¡û
>W2010689836
JACGVG010000032
Gammaproteobacteria
Colwellia sp. MB02u-6 [JACGVG]
18857
18933
+
Trp
CCA
[ENA]
¡û
>W2010689940
JACGVH010000060
Gammaproteobacteria
Colwellia sp. MB02u-19 [JACGVH]
63189
63265
+
Trp
CCA
[ENA]
¡û
>W2010690138
JACGVK010000110
Gammaproteobacteria
Colwellia sp. MB02u-10 [JACGVK]
17300
17376
+
Trp
CCA
[ENA]
¡û
>W2010690181
JACGVL010000041
Gammaproteobacteria
Colwellia sp. MB02u-1 [JACGVL]
63189
63265
+
Trp
CCA
[ENA]
¡û
>W2010690328
JACGVN010000005
Gammaproteobacteria
Colwellia sp. BRX8-9 [JACGVN]
234435
234359
-
Trp
CCA
[ENA]
¡û
>W2010690427
JACGVP010000007
Gammaproteobacteria
Colwellia sp. BRX8-7 [JACGVP]
17626
17702
+
Trp
CCA
[ENA]
¡û
>W2010690742
JACGVT010000060
Gammaproteobacteria
Colwellia sp. BRX8-3 [JACGVT]
184
108
-
Trp
CCA
[ENA]
¡û
>W2010690794
JACGVU010000085
Gammaproteobacteria
Colwellia sp. BRX8-2 [JACGVU]
19090
19166
+
Trp
CCA
[ENA]
¡û
>W2010690863
JACGVV010000028
Gammaproteobacteria
Colwellia sp. BRX10-9 [JACGVV]
35637
35561
-
Trp
CCA
[ENA]
¡û
>W2010690905
JACGVW010000003
Gammaproteobacteria
Colwellia sp. BRX10-7 [JACGVW]
261288
261212
-
Trp
CCA
[ENA]
¡û
>W2010691002
JACGVX010000044
Gammaproteobacteria
Colwellia sp. BRX10-6 [JACGVX]
11665
11589
-
Trp
CCA
[ENA]
¡û
>W2010691147
JACGVZ010000026
Gammaproteobacteria
Colwellia sp. BRX10-4 [JACGVZ]
5186
5110
-
Trp
CCA
[ENA]
¡û
>W2010691214
JACGWA010000009
Gammaproteobacteria
Colwellia sp. BRX10-3 [JACGWA]
81917
81993
+
Trp
CCA
[ENA]
¡û
>W2010691236
JACGWB010000002
Gammaproteobacteria
Colwellia sp. BRX10-2 [JACGWB]
17407
17483
+
Trp
CCA
[ENA]
¡û
>W2010691347
JACGWC010000025
Gammaproteobacteria
Colwellia sp. BRX10-1 [JACGWC]
35461
35385
-
Trp
CCA
[ENA]
¡û
>W2010691528
JACGWF010000005
Gammaproteobacteria
Colwellia sp. 6M3 [JACGWF]
37024
37100
+
Trp
CCA
[ENA]
¡û
>W2011194471
PIPQ01000001
Gammaproteobacteria
Aliidiomarina taiwanensis AIT1 [PIPQ]
196135
196211
+
Trp
CCA
[ENA]
¡û
>W2011194494
PIPQ01000002
Gammaproteobacteria
Aliidiomarina taiwanensis AIT1 [PIPQ]
164950
165026
+
Trp
CCA
[ENA]
¡û
>W2011327528
QXIO01000001
Gammaproteobacteria
Colwellia sp. RSH04 [QXIO]
124142
124218
+
Trp
CCA
[ENA]
¡û
>W2011327589
QXIO01000020
Gammaproteobacteria
Colwellia sp. RSH04 [QXIO]
508
584
+
Trp
CCA
[ENA]
¡û
>W2011345658
QZCH01000001
Gammaproteobacteria
Motilimonas sp. PLHSC7-2 [QZCH]
394551
394475
-
Trp
CCA
[ENA]
¡û
>W2011345720
QZCH01000048
Gammaproteobacteria
Motilimonas sp. PLHSC7-2 [QZCH]
12393
12317
-
Trp
CCA
[ENA]
¡û
>W2011528009
SAWY01000001
Gammaproteobacteria
Litorilituus sp. RZ04 [SAWY]
192037
192113
+
Trp
CCA
[ENA]
¡û
>W2011528050
SAWY01000034
Gammaproteobacteria
Litorilituus sp. RZ04 [SAWY]
243
319
+
Trp
CCA
[ENA]
¡û
>W2011702403
SWDB01000028
Gammaproteobacteria
Thalassotalea sp. ZS-4 [SWDB]
64709
64785
+
Trp
CCA
[ENA]
¡û
>W2011702411
SWDB01000043
Gammaproteobacteria
Thalassotalea sp. ZS-4 [SWDB]
592
668
+
Trp
CCA
[ENA]
¡û
>W2011753408
SZVP01000004
Gammaproteobacteria
Colwellia sp. OISW-25 [SZVP]
126157
126233
+
Trp
CCA
[ENA]
¡û
>W2011753419
SZVP01000006
Gammaproteobacteria
Colwellia sp. OISW-25 [SZVP]
147489
147565
+
Trp
CCA
[ENA]
¡û
>W2011970865
VCBC01000015
Gammaproteobacteria
Thalassotalea litorea MCCC 1K03283 [VCBC]
93396
93472
+
Trp
CCA
[ENA]
¡û
>W2011970872
VCBC01000025
Gammaproteobacteria
Thalassotalea litorea MCCC 1K03283 [VCBC]
16899
16823
-
Trp
CCA
[ENA]
¡û
>W2012068530
VKDD01000002
Gammaproteobacteria
Thalassomonas sp. M1454 [VKDD]
1269655
1269731
+
Trp
CCA
[ENA]
¡û
>W2012068567
VKDD01000004
Gammaproteobacteria
Thalassomonas sp. M1454 [VKDD]
388039
388115
+
Trp
CCA
[ENA]
¡û
>W2012071323
VKKH01000009
Gammaproteobacteria
Aliiglaciecola sp. M165 [VKKH]
270735
270659
-
Trp
CCA
[ENA]
¡û
>W2012105271
VOLP01000018
Gammaproteobacteria
Colwellia hornerae IC037 [VOLP]
70089
70013
-
Trp
CCA
[ENA]
¡û
>W2012105330
VOLQ01000016
Gammaproteobacteria
Colwellia hornerae IC036 [VOLQ]
70165
70089
-
Trp
CCA
[ENA]
¡û
>W2012105409
VOLR01000019
Gammaproteobacteria
Colwellia hornerae ACAM 607 [VOLR]
70165
70089
-
Trp
CCA
[ENA]
¡û
>W2012105444
VOLS01000008
Gammaproteobacteria
Colwellia sp. C1TZA3 [VOLS]
58943
59019
+
Trp
CCA
[ENA]
¡û
>W2012105527
VOLT01000002
Gammaproteobacteria
Colwellia demingiae ACAM 459 [VOLT]
317836
317760
-
Trp
CCA
[ENA]
¡û
>W2012105528
VOLT01000003
Gammaproteobacteria
Colwellia demingiae ACAM 459 [VOLT]
503116
503192
+
Trp
CCA
[ENA]
¡û
>W2110051533
BNAH01000005
Gammaproteobacteria
Thalassotalea profundi CGMCC 1.15922 [BNAH]
275779
275703
-
Trp
CCA
[ENA]
¡û
>W2110522070
JAGDFX010000002
Gammaproteobacteria
Oceanisphaera sp. DM8 [JAGDFX]
22071
22147
+
Trp
CCA
[ENA]
¡û
>W2110611694
JAHKPR010000010
Gammaproteobacteria
Colwellia sp. E2M01 [JAHKPR]
89257
89181
-
Trp
CCA
[ENA]
¡û
>W2110611821
JAHKPT010000035
Gammaproteobacteria
Aliiglaciecola lipolytica D2R05 [JAHKPT]
360400
360476
+
Trp
CCA
[ENA]
¡û
>W2110612232
JAHKQD010000030
Gammaproteobacteria
Colwellia sp. C2M11 [JAHKQD]
16141
16065
-
Trp
CCA
[ENA]
¡û
>W2110612254
JAHKQD010000053
Gammaproteobacteria
Colwellia sp. C2M11 [JAHKQD]
174549
174625
+
Trp
CCA
[ENA]
¡û
>W2110612721
JAHKQO010000007
Gammaproteobacteria
Paraglaciecola arctica A3R16 [JAHKQO]
311395
311471
+
Trp
CCA
[ENA]
¡û
>C231046429
CP040755
Gammaproteobacteria
Colwellia sp. M166 [CP040755]
1087380
1087456
+
Trp
CCA
-
¡û
>C241058599
CP041638
Gammaproteobacteria
Thalassotalea sp. PS06 [CP041638]
3374871
3374795
-
Trp
CCA
-
¡û
>C241058628
CP041638
Gammaproteobacteria
Thalassotalea sp. PS06 [CP041638]
1098124
1098048
-
Trp
CCA
-
¡û
>C241116607
CP047130
Gammaproteobacteria
Colwellia sp. 20A7 [CP047130]
4010519
4010443
-
Trp
CCA
-
¡û
>C241116638
CP047130
Gammaproteobacteria
Colwellia sp. 20A7 [CP047130]
1373753
1373677
-
Trp
CCA
-
¡û
>W2130036363
JAHKPW010000062
Gammaproteobacteria
Colwellia sp. D2M02 [JAHKPW]
268
344
+
Trp
CCA
[ENA]
¡û
>W2130036385
JAHKPW010000070
Gammaproteobacteria
Colwellia sp. D2M02 [JAHKPW]
153099
153023
-
Trp
CCA
[ENA]
¡û
>W1511322690
JQDZ01000018
Gammaproteobacteria
Thalassotalea sp. ND16A [JQDZ]
91371
91447
+
Trp
CCA
[ENA]
¡û
>W1511322734
JQDZ01000107
Gammaproteobacteria
Thalassotalea sp. ND16A [JQDZ]
16740
16664
-
Trp
CCA
[ENA]
¡û
>W1511322896
JQEC01000041
Gammaproteobacteria
Colwellia psychrerythraea GAB14E [JQEC]
1543
1619
+
Trp
CCA
[ENA]
¡û
>W1511322906
JQEC01000055
Gammaproteobacteria
Colwellia psychrerythraea GAB14E [JQEC]
23294
23218
-
Trp
CCA
[ENA]
¡û
>W1511322943
JQED01000005
Gammaproteobacteria
Colwellia psychrerythraea ND2E [JQED]
323626
323550
-
Trp
CCA
[ENA]
¡û
>W1511322994
JQED01000055
Gammaproteobacteria
Colwellia psychrerythraea ND2E [JQED]
384483
384407
-
Trp
CCA
[ENA]
¡û
>W1610663840
LJVG01000014
Gammaproteobacteria
Colwellia sp. MT2012 [LJVG]
99175
99099
-
Trp
CCA
[ENA]
¡û
>W1610663905
LJVG01000044
Gammaproteobacteria
Colwellia sp. MT2012 [LJVG]
192077
192001
-
Trp
CCA
[ENA]
¡û
>W1610667811
LJYX01000006
Gammaproteobacteria
Colwellia sp. TT2012 [LJYX]
531661
531585
-
Trp
CCA
[ENA]
¡û
>W1610667878
LJYX01000021
Gammaproteobacteria
Colwellia sp. TT2012 [LJYX]
638264
638188
-
Trp
CCA
[ENA]
¡û
>W1610896168
LRUI01000013
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [LRUI]
16995
16919
-
Trp
CCA
[ENA]
¡û
>W1610896176
LRUI01000018
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [LRUI]
7951
8027
+
Trp
CCA
[ENA]
¡û
>W1610917274
LSMS01000001
Gammaproteobacteria
Colwellia sp. Phe_37 [LSMS]
1377
1301
-
Trp
CCA
[ENA]
¡û
>W1710087334
BDQM01000002
Gammaproteobacteria
Colwellia marinimaniae [BDQM]
150531
150607
+
Trp
CCA
[ENA]
¡û
>W1710087374
BDQM01000046
Gammaproteobacteria
Colwellia marinimaniae [BDQM]
20679
20603
-
Trp
CCA
[ENA]
¡û
>W1710545220
FOBI01000001
Gammaproteobacteria
Colwellia chukchiensis [FOBI]
86162
86238
+
Trp
CCA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
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(Sample source for ENV)
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Start
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Direction
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Representative sequence of each cluster
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