Select
|
Sequence ID |
Genome ID (or Accession No.) |
Phylum/Class (Sample source for ENV) |
Species |
Start |
End |
Direction |
AA |
Anticodon |
Genome/Seq. Info. |
Decision |
Identical group No.212101 (179 seq.) |
|
>W1710873733 |
LMNA01000006 |
Betaproteobacteria |
Pseudorhodoferax sp. Leaf274 [LMNA] |
4999 |
4923 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1710878084 |
LMQQ01000002 |
Betaproteobacteria |
Methylophilus sp. Leaf414 [LMQQ] |
3846 |
3770 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1710878165 |
LMQS01000002 |
Betaproteobacteria |
Methylophilus sp. Leaf416 [LMQS] |
4220 |
4144 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1710878402 |
LMQX01000012 |
Betaproteobacteria |
Methylophilus sp. Leaf459 [LMQX] |
1846 |
1922 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W1711223909 |
LXTQ01000003 |
Betaproteobacteria |
Methylobacillus sp. MM3 MM2 [LXTQ] |
3649 |
3573 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1711340011 |
MCAW01000025 |
Betaproteobacteria |
Methylophilales bacterium LSUCC0135 [MCAW] |
1890 |
1966 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W131163900 |
ARAC01000002 |
Betaproteobacteria |
Methylophilus sp. 42 [ARAC] |
497255 |
497179 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W131176218 |
ARJW01000001 |
Betaproteobacteria |
Methylophilus methylotrophus DSM 46235 = ATCC 53528 [ARJW] |
968 |
1044 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W131186392 |
ARWC01000001 |
Betaproteobacteria |
Methylotenera sp. 1P/1 [ARWC] |
2034591 |
2034667 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W131186404 |
ARWC01000001 |
Betaproteobacteria |
Methylotenera sp. 1P/1 [ARWC] |
2730879 |
2730955 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W131237260 |
AUNS01000015 |
Betaproteobacteria |
Burkholderiales bacterium JGI 0001003-L21 [AUNS] |
6356 |
6432 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>WENV001174 |
AACY020035727 |
Marine microbial communities from Global Ocean Sampling (GOS) |
|
1838 |
1914 |
+ |
Ile |
GAT |
[ENA] |
|
|
>C017350 |
CP000316 |
Betaproteobacteria |
Polaromonas sp. JS666 [CP000316] |
4451892 |
4451816 |
- |
Ile |
GAT |
[Ensembl] |
¡û |
|
>C026279 |
CP000542 |
Betaproteobacteria |
Verminephrobacter eiseniae EF01-2 [CP000542] |
1982294 |
1982370 |
+ |
Ile |
GAT |
[Ensembl] |
¡û |
|
>C026305 |
CP000542 |
Betaproteobacteria |
Verminephrobacter eiseniae EF01-2 [CP000542] |
3519884 |
3519808 |
- |
Ile |
GAT |
[Ensembl] |
¡û |
|
>C026320 |
CP000542 |
Betaproteobacteria |
Verminephrobacter eiseniae EF01-2 [CP000542] |
1028789 |
1028713 |
- |
Ile |
GAT |
[Ensembl] |
¡û |
|
>WENV016680 |
AACY020468189 |
Marine microbial communities from Global Ocean Sampling (GOS) |
|
1172 |
1096 |
- |
Ile |
GAT |
[ENA] |
|
|
>WENV180102315 |
OAOY01006527 |
[OAOY] marine metagenome; Water |
|
501 |
425 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180103134 |
OAPA01002810 |
[OAPA] marine metagenome; ENVO:00002010 |
|
528 |
604 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180311192 |
OBJT01159697 |
[OBJT] soil metagenome; soil |
|
77 |
1 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180355861 |
OBNJ01002020 |
[OBNJ] sediment metagenome; sediment |
|
1298 |
1222 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180360708 |
OBNU01012951 |
[OBNU] marine metagenome; ENVO:00000021 'freshwater lake |
|
628 |
552 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180362105 |
OBNW01039728 |
[OBNW] marine metagenome; ENVO:00002010, 'SEA WATER |
|
249 |
325 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180365215 |
OBOB01038182 |
[OBOB] marine metagenome; ENVO:00002019, 'BRACKISH WATER |
|
161 |
237 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180369014 |
OBOG01015597 |
[OBOG] marine metagenome; seawater |
|
249 |
325 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180369908 |
OBOH01010131 |
[OBOH] marine metagenome; ENVO:00002010 |
|
689 |
765 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180379993 |
OBOP01254475 |
[OBOP] marine metagenome; water |
|
156 |
80 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180393131 |
OBPP01083562 |
[OBPP] marine metagenome; ENVO:00002042 |
|
144 |
68 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180399166 |
OBQG01003763 |
[OBQG] marine metagenome; ENV:00002010 |
|
141 |
65 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180590852 |
OCOU01019566 |
[OCOU] marine metagenome; Water |
|
259 |
335 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180591414 |
OCOV01019748 |
[OCOV] marine metagenome; ENVO:01000301 |
|
455 |
531 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180688363 |
OCZA010100977 |
[OCZA] marine metagenome; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
483 |
407 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180731643 |
ODGW01004712 |
[ODGW] human metagenome; G_DNA_Supragingival plaque |
|
2187 |
2111 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180801487 |
ODJD01039939 |
[ODJD] human metagenome; G_DNA_Supragingival plaque |
|
38 |
114 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180835630 |
ODKE01006804 |
[ODKE] human metagenome; G_DNA_Supragingival plaque |
|
1307 |
1383 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180934068 |
ODTR01018221 |
[ODTR] human metagenome; G_DNA_Supragingival plaque |
|
111 |
187 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180938998 |
ODTX01011830 |
[ODTX] human metagenome; G_DNA_Supragingival plaque |
|
854 |
930 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180983812 |
ODVF01042292 |
[ODVF] human metagenome; G_DNA_Supragingival plaque |
|
138 |
214 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181009746 |
ODWE01182279 |
[ODWE] human metagenome; G_DNA_Supragingival plaque |
|
99 |
175 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181049777 |
ODYD01002116 |
[ODYD] human metagenome; G_DNA_Supragingival plaque |
|
3637 |
3561 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181070716 |
OEAE01006652 |
[OEAE] human metagenome; G_DNA_Supragingival plaque |
|
2316 |
2240 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181084401 |
OEAV01198094 |
[OEAV] human metagenome; G_DNA_Supragingival plaque |
|
128 |
52 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181120492 |
OEFK01004885 |
[OEFK] marine metagenome; ENVO:00002010 seawater |
|
135 |
211 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181144472 |
OEHO01023586 |
[OEHO] metagenome; unknown |
|
273 |
349 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181164544 |
OEIR01223377 |
[OEIR] soil metagenome; soil |
|
214 |
138 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181187902 |
OEOE01001648 |
[OEOE] activated sludge metagenome; Activated Sludge |
|
2274 |
2198 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181187961 |
OEOE01006537 |
[OEOE] activated sludge metagenome; Activated Sludge |
|
789 |
713 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181307969 |
OFIS01000066 |
[OFIS] sludge metagenome; sludge |
|
135764 |
135840 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181365269 |
OFPN01000006 |
[OFPN] sediment metagenome; Lake sediment |
|
33248 |
33172 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181365384 |
OFPQ01000008 |
[OFPQ] sediment metagenome; Lake sediment |
|
1955 |
2031 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181367093 |
OFPT01000097 |
[OFPT] freshwater metagenome; Freshwater Lake |
|
217 |
141 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181368031 |
OFQG01000002 |
[OFQG] freshwater metagenome; Freshwater Lake |
|
3111 |
3187 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181368280 |
OFQL01000112 |
[OFQL] freshwater metagenome; Freshwater Lake |
|
9074 |
8998 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181370051 |
OFQR01009186 |
[OFQR] freshwater metagenome; Freshwater Lake |
|
237 |
161 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181370295 |
OFQS01002482 |
[OFQS] freshwater metagenome; Freshwater Lake |
|
173 |
249 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181384872 |
OFRI01017895 |
[OFRI] wastewater metagenome; Exp Tend VB 90WW |
|
345 |
421 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181386632 |
OFRL01009000 |
[OFRL] wastewater metagenome; Lake Maggiore Cannobio |
|
1399 |
1323 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181395647 |
OFSB01000125 |
[OFSB] freshwater metagenome; Freshwater Lake |
|
11889 |
11965 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181402190 |
OFTY01000210 |
[OFTY] sludge metagenome; sludge |
|
1601 |
1525 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181402633 |
OFTY01010506 |
[OFTY] sludge metagenome; sludge |
|
1025 |
949 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181593485 |
OGKS01037171 |
[OGKS] metagenome; Human gut stool |
|
127 |
203 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>W141169548 |
AXVZ01000037 |
Betaproteobacteria |
Rhizobacter sp. JGI 0001009-E21 [AXVZ] |
2138 |
2062 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>WENV181835341 |
OGVI01000018 |
[OGVI] freshwater metagenome; freshwater |
|
5128 |
5052 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181835594 |
OGVI01005092 |
[OGVI] freshwater metagenome; freshwater |
|
719 |
643 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181836694 |
OGVJ01019897 |
[OGVJ] freshwater metagenome; freshwater |
|
590 |
514 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181839598 |
OGVO01004060 |
[OGVO] freshwater metagenome; freshwater |
|
2060 |
1984 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181841127 |
OGVQ01004624 |
[OGVQ] freshwater metagenome; freshwater |
|
80 |
156 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181842094 |
OGVS01031972 |
[OGVS] freshwater metagenome; freshwater |
|
187 |
111 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181843099 |
OGVU01000658 |
[OGVU] freshwater metagenome; freshwater |
|
3934 |
4010 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181843356 |
OGVU01010291 |
[OGVU] freshwater metagenome; freshwater |
|
265 |
341 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181843670 |
OGVU01043213 |
[OGVU] freshwater metagenome; freshwater |
|
11 |
87 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181844067 |
OGVV01006960 |
[OGVV] freshwater metagenome; freshwater |
|
674 |
598 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181844257 |
OGVV01030813 |
[OGVV] freshwater metagenome; freshwater |
|
22 |
98 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181845131 |
OGVX01000294 |
[OGVX] freshwater metagenome; freshwater |
|
2219 |
2295 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181848064 |
OGVZ01001772 |
[OGVZ] freshwater metagenome; freshwater |
|
3257 |
3333 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181857176 |
OGWN01062562 |
[OGWN] freshwater metagenome; freshwater |
|
97 |
173 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181857300 |
OGWO01000489 |
[OGWO] freshwater metagenome; freshwater |
|
216 |
292 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181857767 |
OGWO01043149 |
[OGWO] freshwater metagenome; freshwater |
|
180 |
256 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>C08007664 |
CP000316 |
Betaproteobacteria |
Polaromonas sp. JS666 [CP000316] |
4451892 |
4451819 |
- |
Ile |
GAT |
[Ensembl] |
¡û |
|
>W141220071 |
AZXN01000001 |
Betaproteobacteria |
Methylophilus sp. 5 [AZXN] |
1103888 |
1103812 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W141220073 |
AZXN01000001 |
Betaproteobacteria |
Methylophilus sp. 5 [AZXN] |
1097989 |
1097913 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W141220077 |
AZXN01000001 |
Betaproteobacteria |
Methylophilus sp. 5 [AZXN] |
490887 |
490811 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W141231918 |
BAUS01000005 |
Betaproteobacteria |
Methylophilus sp. OH31 [BAUS] |
1850 |
1926 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W141234419 |
BAWN01000023 |
Betaproteobacteria |
Serpentinimonas barnesii H1 [BAWN] |
1913 |
1989 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>WENV182865721 |
OKRQ01000670 |
[OKRQ] freshwater metagenome; freshwater |
|
2430 |
2354 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183510992 |
OMHV01000226 |
[OMHV] human oral metagenome; human oral |
|
2315 |
2239 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>W141350133 |
JCKJ01000001 |
Betaproteobacteria |
Methylophilaceae bacterium 11 [JCKJ] |
105508 |
105584 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W141350145 |
JCKJ01000001 |
Betaproteobacteria |
Methylophilaceae bacterium 11 [JCKJ] |
806904 |
806980 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>WENV183662056 |
ORJL010161124 |
[ORJL] groundwater metagenome; groundwater |
|
892 |
816 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183691744 |
ORMF011810746 |
[ORMF] groundwater metagenome; groundwater |
|
321 |
397 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183698710 |
OZSS01003564 |
[OZSS] metagenome; Seawater sample |
|
4153 |
4077 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183727009 |
PJTO01001717 |
[PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment |
|
2429 |
2353 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183727936 |
PJTP01007715 |
[PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment |
|
27 |
103 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183729266 |
PJTQ01016201 |
[PJTQ] soil metagenome; Soil (3) enriched on wood chips |
|
923 |
847 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183737328 |
PJUD01003741 |
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment |
|
2429 |
2353 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183739312 |
PJUE01007272 |
[PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment |
|
1328 |
1252 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183740526 |
PJUF01003127 |
[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips |
|
929 |
853 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183746225 |
POVV01016217 |
[POVV] bioreactor metagenome; anaerobic chemostat enrichment culture, galacturonate as sole carbon source, pH 8; inoculated with |
|
383 |
459 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>ENV08001365 |
ABMW01168918 |
freshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) |
|
78 |
2 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>WENV020495 |
AACY020554669 |
Marine microbial communities from Global Ocean Sampling (GOS) |
|
2115 |
2039 |
- |
Ile |
GAT |
[ENA] |
|
|
>WENV170002285 |
AGSF01004616 |
[AGSF] microbial mat metagenome; purple microbial (photo and chemo synthetic) mats found in low oxygen high sulfur sink holes |
|
189 |
113 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170019862 |
BBPE01001061 |
[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California |
|
812 |
736 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170158823 |
CEOK01021253 |
[CEOK] marine metagenome genome assembly TARA_030_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
554 |
478 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170168366 |
CEOP01082826 |
[CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
118 |
194 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170180452 |
CEOW01096340 |
[CEOW] marine metagenome genome assembly TARA_058_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
97 |
173 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170207350 |
CEPU01071440 |
[CEPU] marine metagenome genome assembly TARA_041_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
45 |
121 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170296430 |
CESE01002607 |
[CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
391 |
315 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170301361 |
CESH01028315 |
[CESH] marine metagenome genome assembly TARA_094_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
1250 |
1326 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170306075 |
CESJ01000996 |
[CESJ] marine metagenome genome assembly TARA_084_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
728 |
652 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170325190 |
CEST01001700 |
[CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
119 |
195 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170413111 |
CEUK01080274 |
[CEUK] marine metagenome genome assembly TARA_125_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
39 |
115 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170417876 |
CEUM01008584 |
[CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
409 |
485 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170473489 |
CEVH01042126 |
[CEVH] marine metagenome genome assembly TARA_141_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
232 |
308 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170523080 |
CEWG01164938 |
[CEWG] marine metagenome genome assembly TARA_102_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
361 |
285 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170574760 |
FLYN01008267 |
[FLYN] hot springs metagenome; Sediment |
|
223 |
147 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170575098 |
FLYN01031711 |
[FLYN] hot springs metagenome; Sediment |
|
474 |
550 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170600032 |
FUWD010103553 |
[FUWD] metagenome; unknown |
|
287 |
211 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170600401 |
FUWD010123479 |
[FUWD] metagenome; unknown |
|
327 |
403 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170606007 |
FUWD010589685 |
[FUWD] metagenome; unknown |
|
571 |
495 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170705401 |
LNAO01000105 |
[LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with |
|
2923 |
2847 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170705447 |
LNAO01000471 |
[LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with |
|
2499 |
2423 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170708084 |
LNAP01048981 |
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with |
|
452 |
528 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170961639 |
MLJW01000287 |
[MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for |
|
2489 |
2413 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170961703 |
MLJW01000583 |
[MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for |
|
11989 |
12065 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>C181121014 |
CP025628 |
Betaproteobacteria |
Candidatus Kinetoplastibacterium sorsogonicusi MF-08 [CP025628] |
592145 |
592069 |
- |
Ile |
GAT |
- |
¡û |
|
>C191073166 |
CP031013 |
Betaproteobacteria |
Polaromonas sp. SP1 [CP031013] |
1901029 |
1901105 |
+ |
Ile |
GAT |
- |
¡û |
|
>W09101011 |
AADX02000005 |
Betaproteobacteria |
Methylobacillus flagellatus KT [AADX] |
170863 |
170787 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W09101613 |
AAFQ02000005 |
Betaproteobacteria |
Polaromonas sp. JS666 [AAFQ] |
278579 |
278503 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W09106018 |
AASQ01000001 |
Betaproteobacteria |
Verminephrobacter eiseniae EF01-2 [AASQ] |
132163 |
132239 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W09106051 |
AASQ01000025 |
Betaproteobacteria |
Verminephrobacter eiseniae EF01-2 [AASQ] |
56094 |
56170 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W1910015384 |
BDOQ01000005 |
Betaproteobacteria |
Novimethylophilus kurashikiensis La2-4 [BDOQ] |
1951 |
2027 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W1910207439 |
FLMQ01000034 |
Betaproteobacteria |
Thiomonas delicata DSM 16361 [FLMQ] |
129743 |
129667 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1910211111 |
FMBP01000011 |
Betaproteobacteria |
Thiomonas sp. X19 [FMBP] |
450185 |
450109 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1910547769 |
FZOA01000016 |
Betaproteobacteria |
Methylobacillus rhizosphaerae Ca-68 [FZOA] |
3650 |
3574 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>C09107550 |
CP001674 |
Betaproteobacteria |
Methylovorus glucosotrophus SIP3-4 [CP001674] |
76556 |
76632 |
+ |
Ile |
GAT |
[Ensembl] |
¡û |
|
>C09107560 |
CP001674 |
Betaproteobacteria |
Methylovorus glucosotrophus SIP3-4 [CP001674] |
667876 |
667952 |
+ |
Ile |
GAT |
[Ensembl] |
¡û |
|
>WENV026126 |
AACY020942159 |
Marine microbial communities from Global Ocean Sampling (GOS) |
|
66 |
142 |
+ |
Ile |
GAT |
[ENA] |
|
|
>W1911502764 |
OEQA01000002 |
Betaproteobacteria |
Ottowia massiliensis Marseille-P4747 [OEQA] |
666773 |
666697 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1911502766 |
OEQA01000002 |
Betaproteobacteria |
Ottowia massiliensis Marseille-P4747 [OEQA] |
661357 |
661281 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>SRA1001455 |
SRR001064.388829 |
Tilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152) |
|
78 |
2 |
- |
Ile |
GAT |
[SRA] |
|
|
>W1810666655 |
QJOU01000031 |
Betaproteobacteria |
Piscinibacter caeni MQ-18 [QJOU] |
20270 |
20194 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>SRA1014438 |
SRR023845.143697 |
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) |
|
85 |
9 |
- |
Ile |
GAT |
[SRA] |
|
|
>SRA1014870 |
SRR023845.354694 |
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) |
|
133 |
209 |
+ |
Ile |
GAT |
[SRA] |
|
|
>SRA1015051 |
SRR023845.436772 |
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) |
|
85 |
9 |
- |
Ile |
GAT |
[SRA] |
|
|
>SRA1015110 |
SRR023845.464124 |
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) |
|
85 |
9 |
- |
Ile |
GAT |
[SRA] |
|
|
>SRA1015209 |
SRR023845.499990 |
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) |
|
85 |
9 |
- |
Ile |
GAT |
[SRA] |
|
|
>SRA1015269 |
SRR023845.532369 |
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) |
|
177 |
101 |
- |
Ile |
GAT |
[SRA] |
|
|
>C151002097 |
AP014568 |
Betaproteobacteria |
Serpentinimonas raichei A1 [AP014568] |
2548557 |
2548633 |
+ |
Ile |
GAT |
[Ensembl] |
¡û |
|
>C151002099 |
AP014568 |
Betaproteobacteria |
Serpentinimonas raichei A1 [AP014568] |
2554532 |
2554608 |
+ |
Ile |
GAT |
[Ensembl] |
¡û |
|
>C151002141 |
AP014569 |
Betaproteobacteria |
Serpentinimonas maccroryi B1 [AP014569] |
2579825 |
2579901 |
+ |
Ile |
GAT |
[Ensembl] |
¡û |
|
>C151002143 |
AP014569 |
Betaproteobacteria |
Serpentinimonas maccroryi B1 [AP014569] |
2585748 |
2585824 |
+ |
Ile |
GAT |
[Ensembl] |
¡û |
|
>C151090603 |
CP012073 |
Betaproteobacteria |
Ottowia sp. oral taxon 894 W10237 [CP012073] |
1777952 |
1778028 |
+ |
Ile |
GAT |
- |
¡û |
|
>C151090605 |
CP012073 |
Betaproteobacteria |
Ottowia sp. oral taxon 894 W10237 [CP012073] |
1783368 |
1783444 |
+ |
Ile |
GAT |
- |
¡û |
|
>C151090607 |
CP012073 |
Betaproteobacteria |
Ottowia sp. oral taxon 894 W10237 [CP012073] |
1788784 |
1788860 |
+ |
Ile |
GAT |
- |
¡û |
|
>C151104256 |
LN827929 |
Betaproteobacteria |
Candidatus Methylopumilus planktonicus MMS-10A-171 [LN827929] |
939592 |
939516 |
- |
Ile |
GAT |
[Ensembl] |
¡û |
|
>WENV032714 |
AACY021468897 |
Marine microbial communities from Global Ocean Sampling (GOS) |
|
269 |
193 |
- |
Ile |
GAT |
[ENA] |
|
|
>W1510021376 |
BBYR01000090 |
Betaproteobacteria |
Piscinibacter sakaiensis 201-F6 [BBYR] |
1850 |
1926 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>C11114185 |
CP002252 |
Betaproteobacteria |
Methylovorus sp. MP688 [CP002252] |
76432 |
76508 |
+ |
Ile |
GAT |
[Ensembl] |
¡û |
|
>C11114195 |
CP002252 |
Betaproteobacteria |
Methylovorus sp. MP688 [CP002252] |
669531 |
669607 |
+ |
Ile |
GAT |
[Ensembl] |
¡û |
|
>W1511429846 |
JUEA01000035 |
Betaproteobacteria |
Comamonadaceae bacterium BICA1-1 [JUEA] |
4612 |
4536 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1511431970 |
JUGE01000001 |
Betaproteobacteria |
Methylotenera sp. N17 [JUGE] |
520457 |
520533 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W1511431978 |
JUGE01000001 |
Betaproteobacteria |
Methylotenera sp. N17 [JUGE] |
2567048 |
2567124 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>C161029928 |
CP010951 |
Betaproteobacteria |
Ramlibacter tataouinensis 5-10 [CP010951] |
2498609 |
2498685 |
+ |
Ile |
GAT |
[Ensembl] |
¡û |
|
>C161029930 |
CP010951 |
Betaproteobacteria |
Ramlibacter tataouinensis 5-10 [CP010951] |
2504095 |
2504171 |
+ |
Ile |
GAT |
[Ensembl] |
¡û |
|
>C161030824 |
CP011001 |
Betaproteobacteria |
Methylophilales bacterium MBRSF5 [CP011001] |
349138 |
349214 |
+ |
Ile |
GAT |
[Ensembl] |
¡û |
|
>C161030883 |
CP011002 |
Betaproteobacteria |
Methylophilales bacterium MBRS-H7 [CP011002] |
216904 |
216828 |
- |
Ile |
GAT |
[Ensembl] |
¡û |
|
>C161030917 |
CP011003 |
Betaproteobacteria |
Methylophilales bacterium MBRSG12 [CP011003] |
216904 |
216828 |
- |
Ile |
GAT |
[Ensembl] |
¡û |
|
>WENV005690 |
AACY020159143 |
Marine microbial communities from Global Ocean Sampling (GOS) |
|
2338 |
2414 |
+ |
Ile |
GAT |
[ENA] |
|
|
>W121084913 |
AKIV01000055 |
Betaproteobacteria |
Polaromonas sp. CF318 [AKIV] |
35656 |
35580 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1610076224 |
BCYO01000058 |
Betaproteobacteria |
Polaromonas jejuensis NBRC 106434 [BCYO] |
3677 |
3601 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1610736079 |
LMNA01000006 |
Betaproteobacteria |
Pseudorhodoferax sp. Leaf274 [LMNA] |
4999 |
4923 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1610740430 |
LMQQ01000002 |
Betaproteobacteria |
Methylophilus sp. Leaf414 [LMQQ] |
3846 |
3770 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1610740511 |
LMQS01000002 |
Betaproteobacteria |
Methylophilus sp. Leaf416 [LMQS] |
4220 |
4144 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1610740748 |
LMQX01000012 |
Betaproteobacteria |
Methylophilus sp. Leaf459 [LMQX] |
1846 |
1922 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W1611008280 |
LXTQ01000003 |
Betaproteobacteria |
Methylobacillus sp. MM3 MM2 [LXTQ] |
3649 |
3573 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>ENV000947 |
AY196471 |
Environmental sample from ENV division of INSDC |
|
147 |
69 |
- |
Ile |
GAT |
[ENA] |
|
|
>ENV004026 |
DQ190811 |
Environmental sample from ENV division of INSDC |
|
27 |
103 |
+ |
Ile |
GAT |
[ENA] |
|
|
>W1710074039 |
BCYO01000058 |
Betaproteobacteria |
Polaromonas jejuensis NBRC 106434 [BCYO] |
3677 |
3601 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1710578321 |
FPBM01000011 |
Betaproteobacteria |
Polaromonas sp. YR568 [FPBM] |
110557 |
110633 |
+ |
Ile |
GAT |
[ENA] |
¡û |
Select
|
Sequence ID |
Genome ID (or Accession No.) |
Phylum/Class (Sample source for ENV) |
Species |
Start |
End |
Direction |
AA |
Anticodon |
Genome/Seq. Info. |
Decision |