tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.237197 (83 seq.)
>W1710796474 LJSC01000044 Alphaproteobacteria Gemmobacter sp. LW-1 [LJSC] 4543 4618 + Trp CCA [ENA] ¡û
>W1710913042 LNSD01000001 Alphaproteobacteria Sphingopyxis sp. H057 [LNSD] 209307 209232 - Trp CCA [ENA] ¡û
>W1710913087 LNSE01000001 Alphaproteobacteria Sphingopyxis sp. H067 [LNSE] 502470 502545 + Trp CCA [ENA] ¡û
>W1710913132 LNSF01000001 Alphaproteobacteria Sphingopyxis sp. H071 [LNSF] 209307 209232 - Trp CCA [ENA] ¡û
>W1710913176 LNSG01000001 Alphaproteobacteria Sphingopyxis sp. H073 [LNSG] 368179 368254 + Trp CCA [ENA] ¡û
>W1710913230 LNSH01000003 Alphaproteobacteria Sphingopyxis sp. H081 [LNSH] 209307 209232 - Trp CCA [ENA] ¡û
>W1710913286 LNSI01000006 Alphaproteobacteria Sphingopyxis sp. H100 [LNSI] 5364 5439 + Trp CCA [ENA] ¡û
>W1710913324 LNSJ01000004 Alphaproteobacteria Sphingopyxis sp. H107 [LNSJ] 163346 163271 - Trp CCA [ENA] ¡û
>W1710913391 LNSK01000006 Alphaproteobacteria Sphingopyxis sp. A083 [LNSK] 137870 137945 + Trp CCA [ENA] ¡û
>W1711127866 LURA01000099 Alphaproteobacteria Sphingopyxis sp. REDSEA-S22_B5 [LURA] 62326 62401 + Trp CCA [ENA] ¡û
>W1711127902 LURB01000082 Alphaproteobacteria Sphingopyxis sp. REDSEA-S23_B6 [LURB] 15914 15839 - Trp CCA [ENA] ¡û
>W1711127917 LURC01000250 Alphaproteobacteria Sphingopyxis sp. REDSEA-S24_B7 [LURC] 3627 3552 - Trp CCA [ENA] ¡û
>W1711127927 LURE01000001 Alphaproteobacteria Sphingopyxis sp. REDSEA-S29_B3 [LURE] 15967 15892 - Trp CCA [ENA] ¡û
>W1711128051 LURI01000004 Alphaproteobacteria Sphingopyxis sp. REDSEA-S42_B3 [LURI] 146938 147013 + Trp CCA [ENA] ¡û
>W1711386418 MEFH01000065 Alphaproteobacteria Sphingopyxis sp. SCN 67-31 [MEFH] 22468 22393 - Trp CCA [ENA] ¡û
>W131100403 AOUN01000002 Alphaproteobacteria Sphingopyxis sp. MC1 [AOUN] 387602 387527 - Trp CCA [ENA] ¡û
>W1711503962 MKUC01000055 Alphaproteobacteria Sphingopyxis sp. 65-8 [MKUC] 15090 15015 - Trp CCA [ENA] ¡û
>W1711504865 MKUZ01000001 Alphaproteobacteria Devosia sp. 66-22 [MKUZ] 11047 11122 + Trp CCA [ENA] ¡û
>W1711504923 MKVA01000005 Alphaproteobacteria Devosia sp. 67-54 [MKVA] 975735 975660 - Trp CCA [ENA] ¡û
>W1711506121 MKWD01000007 Alphaproteobacteria Rhodobacterales bacterium 65-51 [MKWD] 3487 3562 + Trp CCA [ENA] ¡û
>w012839 AAMU01000003 Alphaproteobacteria Parvularcula bermudensis HTCC2503 [AAMU] 420418 420341 - Trp CCA [ENA] ¡û
>WENV180284202 OBID01020810 [OBID] metagenome; sludge 888 963 + Trp CCA [ENA] ¢þ
>WENV181166929 OEIU01004354 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 2246 2171 - Trp CCA [ENA] ¢þ
>WENV181308270 OFIS01001820 [OFIS] sludge metagenome; sludge 2043 2118 + Trp CCA [ENA] ¢þ
>WENV181402243 OFTY01000306 [OFTY] sludge metagenome; sludge 23897 23822 - Trp CCA [ENA] ¢þ
>WENV183729046 PJTQ01003194 [PJTQ] soil metagenome; Soil (3) enriched on wood chips 1734 1809 + Trp CCA [ENA] ¢þ
>WENV183729376 PJTQ01030594 [PJTQ] soil metagenome; Soil (3) enriched on wood chips 507 582 + Trp CCA [ENA] ¢þ
>WENV183740353 PJUF01001321 [PJUF] feces metagenome; Chicken feces (3) enriched on wood chips 3959 4034 + Trp CCA [ENA] ¢þ
>WENV170305753 CESI01204989 [CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 380 305 - Trp CCA [ENA] ¢þ
>WENV170728815 LULF01001062 [LULF] marine metagenome; Red Sea water column Station 169 - depth 500m 5262 5187 - Trp CCA [ENA] ¢þ
>WENV170732577 LULJ01000137 [LULJ] marine metagenome; Red Sea water column Station 169 - depth 25m 16038 15963 - Trp CCA [ENA] ¢þ
>WENV170734950 LULK01034350 [LULK] marine metagenome; Red Sea water column Station 169 - depth 10m 632 707 + Trp CCA [ENA] ¢þ
>WENV170736061 LULL01036882 [LULL] marine metagenome; Red Sea water column Station 149 - depth 500m 473 548 + Trp CCA [ENA] ¢þ
>WENV170736251 LULM01000458 [LULM] marine metagenome; Red Sea water column Station 149 - depth 200m 6847 6772 - Trp CCA [ENA] ¢þ
>WENV170737561 LULO01000681 [LULO] marine metagenome; Red Sea water column Station 149 - depth 50m 15684 15609 - Trp CCA [ENA] ¢þ
>WENV170738374 LULP01000070 [LULP] marine metagenome; Red Sea water column Station 149 - depth 25m 15967 15892 - Trp CCA [ENA] ¢þ
>WENV170739431 LULQ01001268 [LULQ] marine metagenome; Red Sea water column Station 149 - depth 10m 3338 3263 - Trp CCA [ENA] ¢þ
>WENV170740631 LULR01022786 [LULR] marine metagenome; Red Sea water column Station 108 - depth 500m 1218 1143 - Trp CCA [ENA] ¢þ
>WENV170742107 LULU01001112 [LULU] marine metagenome; Red Sea water column Station 108 - depth 50m 3627 3552 - Trp CCA [ENA] ¢þ
>WENV170742708 LULV01000189 [LULV] marine metagenome; Red Sea water column Station 108 - depth 25m 15914 15839 - Trp CCA [ENA] ¢þ
>WENV170743447 LULW01000078 [LULW] marine metagenome; Red Sea water column Station 108 - depth 10m 62326 62401 + Trp CCA [ENA] ¢þ
>WENV170745688 LULY01027915 [LULY] marine metagenome; Red Sea water column Station 91 - depth 200m 572 497 - Trp CCA [ENA] ¢þ
>WENV170759502 LUMT01000002 [LUMT] marine metagenome; Red Sea water column Station 192 - depth 50m 146938 147013 + Trp CCA [ENA] ¢þ
>WENV170761436 LUMV01000369 [LUMV] marine metagenome; Red Sea water column Station 192 - depth 200m 15443 15368 - Trp CCA [ENA] ¢þ
>WENV170762587 LUMW01016878 [LUMW] marine metagenome; Red Sea water column Station 192 - depth 500m 671 596 - Trp CCA [ENA] ¢þ
>WENV170823004 MDSY01049898 [MDSY] marine metagenome; seawater 15222 15147 - Trp CCA [ENA] ¢þ
>WENV170827110 MDSY01123134 [MDSY] marine metagenome; seawater 3637 3562 - Trp CCA [ENA] ¢þ
>C181133082 CP026381 Alphaproteobacteria Sphingopyxis sp. MG [CP026381] 2366156 2366081 - Trp CCA - ¡û
>W1910501772 FYAT01000013 Alphaproteobacteria Sphingopyxis sp. P1IMeth2 [FYAT] 291068 291143 + Trp CCA [ENA] ¡û
>W1910549109 FZPA01000002 Alphaproteobacteria Sphingopyxis indica DS15 [FZPA] 333731 333656 - Trp CCA [ENA] ¡û
>W1910934238 NIWD01000003 Alphaproteobacteria Sphingopyxis sp. GW247-27LB [NIWD] 13097 13022 - Trp CCA [ENA] ¡û
>W1911411568 NWUR01000010 Alphaproteobacteria Sphingopyxis terrae DSM 24316 [NWUR] 176189 176114 - Trp CCA [ENA] ¡û
>W1911495344 OBMT01000001 Alphaproteobacteria Rhodobacter maris JA276 [OBMT] 704720 704645 - Trp CCA [ENA] ¡û
>W1911787283 QXXQ01000002 Alphaproteobacteria Gemmobacter lutimaris YJ-T1-11 [QXXQ] 46890 46965 + Trp CCA [ENA] ¡û
>W1810107967 PHFW01000002 Alphaproteobacteria Sphingopyxis lindanitolerans WS5A3p [PHFW] 713670 713595 - Trp CCA [ENA] ¡û
>W1810504080 QBKP01000004 Alphaproteobacteria Gemmobacter caeni DSM 21823 [QBKP] 49896 49971 + Trp CCA [ENA] ¡û
>W1810887570 QUQO01000001 Alphaproteobacteria Parvularcula marina SM1705 [QUQO] 872002 871927 - Trp CCA [ENA] ¡û
>C151051493 CP009452 Alphaproteobacteria Sphingopyxis sp. 113P3 [CP009452] 1399874 1399949 + Trp CCA - ¡û
>C10110138 CP002156 Alphaproteobacteria Parvularcula bermudensis HTCC2503 [CP002156] 2592371 2592296 - Trp CCA [Ensembl] ¡û
>W1511324671 JQFJ01000002 Alphaproteobacteria Sphingopyxis sp. MWB1 [JQFJ] 959596 959521 - Trp CCA [ENA] ¡û
>C161040510 CP012199 Alphaproteobacteria Sphingopyxis granuli TFA [CP012199] 3406133 3406058 - Trp CCA [Ensembl] ¡û
>C161055636 CP013342 Alphaproteobacteria Sphingopyxis terrae subsp. terrae NBRC 15098 203-1 [CP013342] 385608 385533 - Trp CCA [Ensembl] ¡û
>W1610071378 BCUA01000040 Alphaproteobacteria Sphingopyxis granuli NBRC 100800 [BCUA] 32622 32547 - Trp CCA [ENA] ¡û
>W1610077694 BCZQ01000021 Alphaproteobacteria Sphingopyxis terrae NBRC 15098 [BCZQ] 31669 31594 - Trp CCA [ENA] ¡û
>W1610660431 LJSC01000044 Alphaproteobacteria Gemmobacter sp. LW-1 [LJSC] 4543 4618 + Trp CCA [ENA] ¡û
>W1610771401 LNSD01000001 Alphaproteobacteria Sphingopyxis sp. H057 [LNSD] 209307 209232 - Trp CCA [ENA] ¡û
>W1610771446 LNSE01000001 Alphaproteobacteria Sphingopyxis sp. H067 [LNSE] 502470 502545 + Trp CCA [ENA] ¡û
>W1610771491 LNSF01000001 Alphaproteobacteria Sphingopyxis sp. H071 [LNSF] 209307 209232 - Trp CCA [ENA] ¡û
>W1610771535 LNSG01000001 Alphaproteobacteria Sphingopyxis sp. H073 [LNSG] 368179 368254 + Trp CCA [ENA] ¡û
>W1610771589 LNSH01000003 Alphaproteobacteria Sphingopyxis sp. H081 [LNSH] 209307 209232 - Trp CCA [ENA] ¡û
>W1610771645 LNSI01000006 Alphaproteobacteria Sphingopyxis sp. H100 [LNSI] 5364 5439 + Trp CCA [ENA] ¡û
>W1610771683 LNSJ01000004 Alphaproteobacteria Sphingopyxis sp. H107 [LNSJ] 163346 163271 - Trp CCA [ENA] ¡û
>W1610771750 LNSK01000006 Alphaproteobacteria Sphingopyxis sp. A083 [LNSK] 137870 137945 + Trp CCA [ENA] ¡û
>W1610938980 LURA01000099 Alphaproteobacteria Sphingopyxis sp. REDSEA-S22_B5 [LURA] 62326 62401 + Trp CCA [ENA] ¡û
>W1610939016 LURB01000082 Alphaproteobacteria Sphingopyxis sp. REDSEA-S23_B6 [LURB] 15914 15839 - Trp CCA [ENA] ¡û
>W1610939031 LURC01000250 Alphaproteobacteria Sphingopyxis sp. REDSEA-S24_B7 [LURC] 3627 3552 - Trp CCA [ENA] ¡û
>W1610939041 LURE01000001 Alphaproteobacteria Sphingopyxis sp. REDSEA-S29_B3 [LURE] 15967 15892 - Trp CCA [ENA] ¡û
>W1610939165 LURI01000004 Alphaproteobacteria Sphingopyxis sp. REDSEA-S42_B3 [LURI] 146938 147013 + Trp CCA [ENA] ¡û
>W1710068743 BCUA01000040 Alphaproteobacteria Sphingopyxis granuli NBRC 100800 [BCUA] 32622 32547 - Trp CCA [ENA] ¡û
>W1710075332 BCZQ01000021 Alphaproteobacteria Sphingopyxis terrae NBRC 15098 [BCZQ] 31669 31594 - Trp CCA [ENA] ¡û
>W1710540039 FNWK01000001 Alphaproteobacteria Sphingopyxis sp. YR583 [FNWK] 338073 337998 - Trp CCA [ENA] ¡û
>W1710602866 FUYP01000001 Alphaproteobacteria Sphingopyxis flava [FUYP] 220498 220423 - Trp CCA [ENA] ¡û
>W1710609444 FXWL01000002 Alphaproteobacteria Sphingopyxis terrae ummariensis [FXWL] 606418 606343 - Trp CCA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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