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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.237368 (237 seq.)
>W1710785258
LJHS01000002
Alphaproteobacteria
Rhizobium sp. AAP43 [LJHS]
57532
57607
+
Thr
CGT
[ENA]
¡û
>W1710785659
LJIB01000008
Alphaproteobacteria
Rhizobium sp. AAP116 [LJIB]
123573
123648
+
Thr
CGT
[ENA]
¡û
>W1710797044
LJSR01000003
Alphaproteobacteria
Rhizobium acidisoli [LJSR]
28789
28864
+
Thr
CGT
[ENA]
¡û
>W1710860429
LMCW01000001
Alphaproteobacteria
Rhizobium sp. Root1203 [LMCW]
1538
1463
-
Thr
CGT
[ENA]
¡û
>W1710860549
LMCZ01000001
Alphaproteobacteria
Rhizobium sp. Root1204 [LMCZ]
311525
311600
+
Thr
CGT
[ENA]
¡û
>W1710861500
LMDR01000001
Alphaproteobacteria
Rhizobium sp. Root1240 [LMDR]
1302013
1302088
+
Thr
CGT
[ENA]
¡û
>W1710863219
LMEY01000001
Alphaproteobacteria
Rhizobium sp. Root1334 [LMEY]
1007866
1007941
+
Thr
CGT
[ENA]
¡û
>W1710863345
LMFA01000023
Alphaproteobacteria
Rhizobium sp. Root482 [LMFA]
311601
311526
-
Thr
CGT
[ENA]
¡û
>W1710866872
LMHV01000012
Alphaproteobacteria
Rhizobium sp. Root708 [LMHV]
312043
311968
-
Thr
CGT
[ENA]
¡û
>W1710867353
LMIF01000001
Alphaproteobacteria
Rhizobium sp. Root73 [LMIF]
1008007
1008082
+
Thr
CGT
[ENA]
¡û
>W1710868551
LMJE01000001
Alphaproteobacteria
Rhizobium sp. Root274 [LMJE]
1302012
1302087
+
Thr
CGT
[ENA]
¡û
>W1710873049
LMMM01000012
Alphaproteobacteria
Rhizobium sp. Leaf262 [LMMM]
285970
286045
+
Thr
CGT
[ENA]
¡û
>W1710876367
LMPE01000003
Alphaproteobacteria
Rhizobium sp. Leaf341 [LMPE]
720901
720976
+
Thr
CGT
[ENA]
¡û
>W1710877390
LMQB01000023
Alphaproteobacteria
Rhizobium sp. Leaf371 [LMQB]
249393
249468
+
Thr
CGT
[ENA]
¡û
>W1710877468
LMQD01000001
Alphaproteobacteria
Rhizobium sp. Leaf383 [LMQD]
357215
357290
+
Thr
CGT
[ENA]
¡û
>W1710877524
LMQE01000001
Alphaproteobacteria
Rhizobium sp. Leaf384 [LMQE]
1351679
1351754
+
Thr
CGT
[ENA]
¡û
>W1710883235
LMVL01000040
Alphaproteobacteria
Agrobacterium vitis [LMVL]
139997
139922
-
Thr
CGT
[ENA]
¡û
>W1710916275
LNUW01000036
Alphaproteobacteria
Agrobacterium bohemicum R89-1 [LNUW]
256714
256789
+
Thr
CGT
[ENA]
¡û
>W1710935882
LOKU01000041
Alphaproteobacteria
Rhizobium sp. N122 [LOKU]
13200
13275
+
Thr
CGT
[ENA]
¡û
>W1711169157
LVYU01000139
Alphaproteobacteria
Rhizobium leguminosarum [LVYU]
32821
32896
+
Thr
CGT
[ENA]
¡û
>W1711172061
LWBS01000032
Alphaproteobacteria
Rhizobium leguminosarum [LWBS]
5233
5308
+
Thr
CGT
[ENA]
¡û
>W1711213623
LXKM01000023
Alphaproteobacteria
Agrobacterium sp. 13-626 [LXKM]
285722
285647
-
Thr
CGT
[ENA]
¡û
>W1711213695
LXKO01000001
Alphaproteobacteria
Rhizobium sp. AC44/96 [LXKO]
205709
205634
-
Thr
CGT
[ENA]
¡û
>W1711213764
LXKP01000016
Alphaproteobacteria
Agrobacterium sp. B131/95 [LXKP]
415988
415913
-
Thr
CGT
[ENA]
¡û
>W1711213802
LXKQ01000023
Alphaproteobacteria
Agrobacterium sp. B133/95 [LXKQ]
381582
381657
+
Thr
CGT
[ENA]
¡û
>W1711214015
LXKU01000020
Alphaproteobacteria
Agrobacterium rubi [LXKU]
473043
473118
+
Thr
CGT
[ENA]
¡û
>W1711305215
MAMO01000002
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii [MAMO]
110429
110504
+
Thr
CGT
[ENA]
¡û
>W1711315237
MAVS01000069
Alphaproteobacteria
Agrobacterium vitis [MAVS]
273336
273411
+
Thr
CGT
[ENA]
¡û
>W1711317052
MAWZ01000001
Alphaproteobacteria
Rhizobium sp. RSm-3 [MAWZ]
545118
545043
-
Thr
CGT
[ENA]
¡û
>W1711325897
MBEV01000003
Alphaproteobacteria
Agrobacterium vitis [MBEV]
133514
133439
-
Thr
CGT
[ENA]
¡û
>W1711325961
MBEX01000062
Alphaproteobacteria
Agrobacterium vitis [MBEX]
68456
68381
-
Thr
CGT
[ENA]
¡û
>W1711325998
MBEY01000013
Alphaproteobacteria
Agrobacterium vitis [MBEY]
146319
146244
-
Thr
CGT
[ENA]
¡û
>W1711326042
MBEZ01000005
Alphaproteobacteria
Agrobacterium vitis [MBEZ]
137356
137281
-
Thr
CGT
[ENA]
¡û
>W1711326120
MBFA01000069
Alphaproteobacteria
Agrobacterium vitis [MBFA]
354408
354483
+
Thr
CGT
[ENA]
¡û
>W1711326140
MBFB01000013
Alphaproteobacteria
Agrobacterium vitis [MBFB]
471661
471736
+
Thr
CGT
[ENA]
¡û
>W1711326215
MBFC01000060
Alphaproteobacteria
Agrobacterium vitis [MBFC]
354466
354541
+
Thr
CGT
[ENA]
¡û
>W1711326230
MBFD01000011
Alphaproteobacteria
Agrobacterium vitis [MBFD]
354540
354615
+
Thr
CGT
[ENA]
¡û
>W1711326311
MBFE01000083
Alphaproteobacteria
Agrobacterium vitis [MBFE]
354407
354482
+
Thr
CGT
[ENA]
¡û
>W1711384900
MEDN01000004
Alphaproteobacteria
Agrobacterium sp. SCN 61-19 [MEDN]
102027
102102
+
Thr
CGT
[ENA]
¡û
>W1711489045
MKIM01000025
Alphaproteobacteria
Rhizobium oryziradicis [MKIM]
133422
133497
+
Thr
CGT
[ENA]
¡û
>W1711489103
MKIN01000020
Alphaproteobacteria
Allorhizobium taibaishanense [MKIN]
311275
311200
-
Thr
CGT
[ENA]
¡û
>W1711489182
MKIO01000040
Alphaproteobacteria
Xaviernesmea rhizosphaerae MH17 [MKIO]
119221
119296
+
Thr
CGT
[ENA]
¡û
>W1711606269
MOOY01000004
Alphaproteobacteria
Pararhizobium arenae MIM27 [MOOY]
504503
504578
+
Thr
CGT
[ENA]
¡û
>W1711636768
MPVZ01000003
Alphaproteobacteria
Rhizobium sp. P44RR-XXIV [MPVZ]
409637
409562
-
Thr
CGT
[ENA]
¡û
>W1711642814
MPZP01000052
Alphaproteobacteria
Rhizobium leguminosarum bv. viciae [MPZP]
12582
12507
-
Thr
CGT
[ENA]
¡û
>W1711667380
MRDL01000019
Alphaproteobacteria
Rhizobium leguminosarum bv. viciae USDA 2370 [MRDL]
27241
27166
-
Thr
CGT
[ENA]
¡û
>W1711667435
MRDM01000010
Alphaproteobacteria
Rhizobium laguerreae [MRDM]
559343
559268
-
Thr
CGT
[ENA]
¡û
>W1711959629
NBZE01000001
Alphaproteobacteria
Allorhizobium ampelinum vitis [NBZE]
354381
354456
+
Thr
CGT
[ENA]
¡û
>C171050010
CP016499
Alphaproteobacteria
Agrobacterium sp. RAC06 [CP016499]
2422807
2422882
+
Thr
CGT
-
¡û
>C171075917
CP018228
Alphaproteobacteria
Rhizobium leguminosarum Vaf-108 [CP018228]
3742471
3742546
+
Thr
CGT
-
¡û
>C171114969
CP020947
Alphaproteobacteria
Rhizobium sp. CIAT894 [CP020947]
548532
548457
-
Thr
CGT
-
¡û
>W131036057
AKIA01000022
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii TA1 [AKIA]
49176
49101
-
Thr
CGT
[ENA]
¡û
>W131036203
ALJF01000016
Alphaproteobacteria
Agrobacterium albertimagni AOL15 [ALJF]
123185
123260
+
Thr
CGT
[ENA]
¡û
>W131158491
AQUC01000006
Alphaproteobacteria
Rhizobium leguminosarum bv. viciae TOM [AQUC]
173419
173344
-
Thr
CGT
[ENA]
¡û
>W131158522
AQUD01000001
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii SRDI565 [AQUD]
4164638
4164563
-
Thr
CGT
[ENA]
¡û
>W131158813
AQUM01000001
Alphaproteobacteria
Rhizobium leguminosarum bv. viciae WSM1481 [AQUM]
3374394
3374319
-
Thr
CGT
[ENA]
¡û
>W131158877
AQUN01000001
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii SRDI943 [AQUN]
2730
2655
-
Thr
CGT
[ENA]
¡û
>W131160145
AQWI01000065
Alphaproteobacteria
Rhizobium leguminosarum bv. viciae Ps8 [AQWI]
49435
49360
-
Thr
CGT
[ENA]
¡û
>W131163356
AQZR01000001
Alphaproteobacteria
Rhizobium leguminosarum bv. phaseoli 4292 [AQZR]
4165925
4165850
-
Thr
CGT
[ENA]
¡û
>W131165051
ARBG01000194
Alphaproteobacteria
Rhizobium giardinii bv. giardinii H152 [ARBG]
405827
405752
-
Thr
CGT
[ENA]
¡û
>W131167237
ARDC01000005
Alphaproteobacteria
Rhizobium gallicum bv. gallicum R602sp [ARDC]
117912
117987
+
Thr
CGT
[ENA]
¡û
>W131167841
ARDP01000094
Alphaproteobacteria
Rhizobium leguminosarum bv. viciae Vc2 [ARDP]
5286
5361
+
Thr
CGT
[ENA]
¡û
>W131167935
ARDR01000040
Alphaproteobacteria
Rhizobium leguminosarum bv. viciae Vh3 [ARDR]
12454
12529
+
Thr
CGT
[ENA]
¡û
>W131168201
ARDW01000037
Alphaproteobacteria
Rhizobium leguminosarum bv. viciae 128C53 [ARDW]
27456
27381
-
Thr
CGT
[ENA]
¡û
>W131174603
ARIO01000042
Alphaproteobacteria
Rhizobium sp. 2MFCol3.1 [ARIO]
161434
161359
-
Thr
CGT
[ENA]
¡û
>W131181100
ARNQ01000027
Alphaproteobacteria
Pannonibacter phragmitetus DSM 14782 [ARNQ]
16179
16254
+
Thr
CGT
[ENA]
¡û
>W131183164
ARRT01000006
Alphaproteobacteria
Rhizobium leguminosarum bv. viciae 248 [ARRT]
173126
173051
-
Thr
CGT
[ENA]
¡û
>W131214098
ATTN01000027
Alphaproteobacteria
Rhizobium leguminosarum bv. phaseoli FA23 [ATTN]
46995
47070
+
Thr
CGT
[ENA]
¡û
>W131214171
ATTP01000008
Alphaproteobacteria
Rhizobium leguminosarum bv. viciae GB30 [ATTP]
258160
258235
+
Thr
CGT
[ENA]
¡û
>W131219341
ATYN01000001
Alphaproteobacteria
Rhizobium leguminosarum bv. viciae UPM1137 [ATYN]
340874
340949
+
Thr
CGT
[ENA]
¡û
>W131219492
ATYQ01000001
Alphaproteobacteria
Rhizobium leguminosarum bv. viciae VF39 [ATYQ]
208039
208114
+
Thr
CGT
[ENA]
¡û
>C018730
AM236080
Alphaproteobacteria
Rhizobium johnstonii 3841 [AM236080]
580094
580019
-
Thr
CGT
[Ensembl]
¡û
>W141022636
AJUI01000025
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii CC278f [AJUI]
50989
51064
+
Thr
CGT
[ENA]
¡û
>W141170622
AXYP01000081
Alphaproteobacteria
Rhizobium sp. JGI 0001019-L19 [AXYP]
1475
1550
+
Thr
CGT
[ENA]
¡û
>W08007064
ABJS01000067
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii WSM1325 [ABJS]
32166
32094
-
Thr
CGT
[ENA]
¡û
>W08007882
ABKO01000002
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii WSM2304 [ABKO]
548132
548060
-
Thr
CGT
[ENA]
¡û
>W08010601
ABRD01002363
Alphaproteobacteria
Rhizobium etli CIAT 894 [ABRD] CIAT 894 [ABRD]
2002
1930
-
Thr
CGT
[ENA]
¡û
>W141220309
AZXS01000068
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii CC283b [AZXS]
27866
27791
-
Thr
CGT
[ENA]
¡û
>W141236094
BAYX01000010
Alphaproteobacteria
Rhizobium rhizogenes NBRC 13257 [BAYX]
105734
105809
+
Thr
CGT
[ENA]
¡û
>W141237957
BBJU01000010
Alphaproteobacteria
Agrobacterium rubi NBRC 13261 [BBJU]
195381
195456
+
Thr
CGT
[ENA]
¡û
>W141277014
JAEG01000004
Alphaproteobacteria
Ciceribacter selenitireducens ATCC BAA-1503 [JAEG]
204758
204683
-
Thr
CGT
[ENA]
¡û
>WENV170936356
MDTG01273888
[MDTG] marine metagenome; seawater
4596
4671
+
Thr
CGT
[ENA]
¢þ
>WENV171003551
NNBU01000375
[NNBU] plant metagenome; symbiotic tissue sample KVJ2
3285
3210
-
Thr
CGT
[ENA]
¢þ
>W141485689
JFZP01000019
Alphaproteobacteria
Rhizobium rhizogenes [JFZP]
424398
424323
-
Thr
CGT
[ENA]
¡û
>C181068719
CP022564
Alphaproteobacteria
Rhizobium leguminosarum bv. viciae BIHB 1148 [CP022564]
2635141
2635216
+
Thr
CGT
-
¡û
>C181070658
CP022665
Alphaproteobacteria
Rhizobium leguminosarum bv. viciae BIHB 1217 [CP022665]
1659143
1659218
+
Thr
CGT
-
¡û
>C181110714
CP025012
Alphaproteobacteria
Rhizobium leguminosarum Norway [CP025012]
161006
160931
-
Thr
CGT
-
¡û
>C181118175
CP025509
Alphaproteobacteria
Rhizobium leguminosarum bv. viciae UPM791 [CP025509]
169339
169264
-
Thr
CGT
-
¡û
>C181192353
CP030760
Alphaproteobacteria
Rhizobium leguminosarum ATCC 14479 [CP030760]
3656891
3656816
-
Thr
CGT
-
¡û
>C191093679
CP032684
Alphaproteobacteria
Rhizobium sp. CCGE531 [CP032684]
653608
653533
-
Thr
CGT
-
¡û
>C191093730
CP032689
Alphaproteobacteria
Rhizobium sp. CCGE532 [CP032689]
651110
651035
-
Thr
CGT
-
¡û
>C191133565
CP034998
Alphaproteobacteria
Rhizobium acidisoli FH23 [CP034998]
159719
159644
-
Thr
CGT
-
¡û
>W141712233
JMQK01000012
Alphaproteobacteria
Pseudorhizobium marinum MGL06 [JMQK]
13832
13907
+
Thr
CGT
[ENA]
¡û
>W141739430
JNNU01000004
Alphaproteobacteria
Neorhizobium vignae [JNNU]
27957
28032
+
Thr
CGT
[ENA]
¡û
>W141776082
JOKI01000003
Alphaproteobacteria
Pseudorhizobium pelagicum R1-200B2 [JOKI]
23171
23096
-
Thr
CGT
[ENA]
¡û
>W141776158
JOKJ01000039
Alphaproteobacteria
Pseudorhizobium pelagicum R2-400B4 [JOKJ]
13469
13544
+
Thr
CGT
[ENA]
¡û
>W141815999
JQJO01000001
Alphaproteobacteria
Rhizobium sp. OK665 [JQJO]
506548
506473
-
Thr
CGT
[ENA]
¡û
>W141816221
JQJS01000009
Alphaproteobacteria
Rhizobium leguminosarum [JQJS]
106698
106623
-
Thr
CGT
[ENA]
¡û
>W141816467
JQJW01000005
Alphaproteobacteria
Rhizobium rhizogenes [JQJW]
111766
111841
+
Thr
CGT
[ENA]
¡û
>W141816490
JQJX01000002
Alphaproteobacteria
Rhizobium rhizogenes [JQJX]
768984
769059
+
Thr
CGT
[ENA]
¡û
>W141817772
JQLA01000008
Alphaproteobacteria
Rhizobium sp. OK494 [JQLA]
171523
171448
-
Thr
CGT
[ENA]
¡û
>W141817828
JQLB01000005
Alphaproteobacteria
Rhizobium sp. YR060 [JQLB]
418142
418067
-
Thr
CGT
[ENA]
¡û
>W141817918
JQLD01000004
Alphaproteobacteria
Rhizobium sp. YR519 [JQLD]
125350
125425
+
Thr
CGT
[ENA]
¡û
>W141819253
JQME01000001
Alphaproteobacteria
Rhizobium sp. CF258 [JQME]
502079
502154
+
Thr
CGT
[ENA]
¡û
>W141819299
JQMF01000001
Alphaproteobacteria
Rhizobium sp. CF097 [JQMF]
377803
377878
+
Thr
CGT
[ENA]
¡û
>W141821297
JQNM01000001
Alphaproteobacteria
Rhizobium sp. YR295 [JQNM]
681200
681125
-
Thr
CGT
[ENA]
¡û
>W1910226231
FMUD01000014
Alphaproteobacteria
Agrobacterium sp. DSM 25558 [FMUD]
76006
76081
+
Thr
CGT
[ENA]
¡û
>W1910226274
FMUE01000004
Alphaproteobacteria
Agrobacterium rosae DSM 25559 [FMUE]
46167
46242
+
Thr
CGT
[ENA]
¡û
>W1910501467
FYAN01000003
Alphaproteobacteria
Pannonibacter sp. I15F10I1 [FYAN]
99763
99688
-
Thr
CGT
[ENA]
¡û
>W1910501511
FYAO01000005
Alphaproteobacteria
Pannonibacter sp. P2PFMT1 [FYAO]
172974
173049
+
Thr
CGT
[ENA]
¡û
>W1910501568
FYAP01000008
Alphaproteobacteria
Pannonibacter sp. CS1GBFMT1 [FYAP]
172974
173049
+
Thr
CGT
[ENA]
¡û
>W1910501609
FYAQ01000006
Alphaproteobacteria
Pannonibacter sp. TSB10GB1 [FYAQ]
172974
173049
+
Thr
CGT
[ENA]
¡û
>W1910636623
LODW01000071
Alphaproteobacteria
Rhizobium hidalgonense FH14 [LODW]
25041
24966
-
Thr
CGT
[ENA]
¡û
>W1910636686
LOID01000001
Alphaproteobacteria
Rhizobium sp. N4311 [LOID]
551201
551126
-
Thr
CGT
[ENA]
¡û
>W1910839932
MZMU01000003
Alphaproteobacteria
Rhizobium leguminosarum Tri-43 [MZMU]
340141
340066
-
Thr
CGT
[ENA]
¡û
>W1910841931
NAON01000004
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii CCGM4 [NAON]
62142
62067
-
Thr
CGT
[ENA]
¡û
>W1910841981
NAOO01000004
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii CCGM5 [NAOO]
62141
62066
-
Thr
CGT
[ENA]
¡û
>W1910842022
NAOP01000002
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii CCGM6 [NAOP]
272782
272707
-
Thr
CGT
[ENA]
¡û
>C09100711
CP000628
Alphaproteobacteria
Rhizobium rhizogenes K84 [CP000628, CP000629]
624456
624381
-
Thr
CGT
[Ensembl]
¡û
>C09100932
CP000633
Alphaproteobacteria
Allorhizobium ampelinum S4 [CP000633, CP000634]
422318
422393
+
Thr
CGT
[Ensembl]
¡û
>C09108856
CP001622
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii WSM1325 [CP001622]
171140
171065
-
Thr
CGT
[Ensembl]
¡û
>C09108907
CP001191
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii WSM2304 [CP001191]
161309
161234
-
Thr
CGT
[Ensembl]
¡û
>W1911408915
NWSJ01000057
Alphaproteobacteria
Rhizobium anhuiense J3 [NWSJ]
11978
12053
+
Thr
CGT
[ENA]
¡û
>W1911408947
NWSK01000027
Alphaproteobacteria
Rhizobium anhuiense S10 [NWSK]
86294
86369
+
Thr
CGT
[ENA]
¡û
>W1911408989
NWSL01000029
Alphaproteobacteria
Rhizobium anhuiense Y27 [NWSL]
537
462
-
Thr
CGT
[ENA]
¡û
>W1911409002
NWSM01000005
Alphaproteobacteria
Rhizobium anhuiense JX3 [NWSM]
86307
86382
+
Thr
CGT
[ENA]
¡û
>W1911409059
NWSN01000004
Alphaproteobacteria
Rhizobium anhuiense C15 [NWSN]
95586
95661
+
Thr
CGT
[ENA]
¡û
>W1911409218
NWSQ01000035
Alphaproteobacteria
Rhizobium sp. L43 [NWSQ]
23951
23876
-
Thr
CGT
[ENA]
¡û
>W1911409232
NWSR01000004
Alphaproteobacteria
Rhizobium sp. L18 [NWSR]
295650
295575
-
Thr
CGT
[ENA]
¡û
>W1911409396
NWSV01000029
Alphaproteobacteria
Rhizobium chutanense C5 [NWSV]
34945
34870
-
Thr
CGT
[ENA]
¡û
>W1911409524
NWSY01000040
Alphaproteobacteria
Rhizobium hidalgonense FH14 [NWSY]
25041
24966
-
Thr
CGT
[ENA]
¡û
>W1911422574
NXEJ01000001
Alphaproteobacteria
Agrobacterium rosae NCPPB 1650 [NXEJ]
326799
326724
-
Thr
CGT
[ENA]
¡û
>W1911551805
PCDP01000038
Alphaproteobacteria
Rhizobium tubonense CCBAU 85046 [PCDP]
227301
227376
+
Thr
CGT
[ENA]
¡û
>W1911767366
QXER01000010
Alphaproteobacteria
Pannonibacter phragmitetus 954 [QXER]
224448
224523
+
Thr
CGT
[ENA]
¡û
>W1911767416
QXES01000004
Alphaproteobacteria
Pannonibacter phragmitetus H1-4 [QXES]
1079510
1079435
-
Thr
CGT
[ENA]
¡û
>W1810084206
PEQT01000002
Alphaproteobacteria
Agrobacterium rosae B20.3 [PEQT]
674054
674129
+
Thr
CGT
[ENA]
¡û
>W1810089065
PGEL01000022
Alphaproteobacteria
Agrobacterium bohemicum R90 [PGEL]
256714
256789
+
Thr
CGT
[ENA]
¡û
>W1810195500
PKRP01000002
Alphaproteobacteria
Rhizobium sp. TH135 [PKRP]
26167
26092
-
Thr
CGT
[ENA]
¡û
>W1810195918
PKSP01000010
Alphaproteobacteria
Rhizobium sp. KAs_5_22 [PKSP]
3513366
3513441
+
Thr
CGT
[ENA]
¡û
>W1810232542
PPCN01000006
Alphaproteobacteria
Roseibium marinum DSM 17023 [PPCN]
77607
77532
-
Thr
CGT
[ENA]
¡û
>W1810345973
PVBF01000001
Alphaproteobacteria
Neorhizobium tomejilense T20_22 [PVBF]
545081
545006
-
Thr
CGT
[ENA]
¡û
>W1810346042
PVBG01000012
Alphaproteobacteria
Neorhizobium tomejilense T17_20 [PVBG]
164986
165061
+
Thr
CGT
[ENA]
¡û
>W1810346065
PVBH01000001
Alphaproteobacteria
Neorhizobium tomejilense T11_12 [PVBH]
530486
530411
-
Thr
CGT
[ENA]
¡û
>W1810346132
PVBI01000005
Alphaproteobacteria
Neorhizobium sp. T25_13 [PVBI]
66721
66796
+
Thr
CGT
[ENA]
¡û
>W1810346167
PVBJ01000002
Alphaproteobacteria
Neorhizobium sp. T25_27 [PVBJ]
557764
557689
-
Thr
CGT
[ENA]
¡û
>W1810346239
PVBK01000014
Alphaproteobacteria
Neorhizobium sp. T7_12 [PVBK]
2121
2046
-
Thr
CGT
[ENA]
¡û
>W1810346240
PVBK01000015
Alphaproteobacteria
Neorhizobium sp. T7_12 [PVBK]
5888
5963
+
Thr
CGT
[ENA]
¡û
>W1810346290
PVBL01000026
Alphaproteobacteria
Neorhizobium sp. T6_25 [PVBL]
18648
18723
+
Thr
CGT
[ENA]
¡û
>W1810504544
QBLB01000004
Alphaproteobacteria
Rhizobium leguminosarum bv. viciae USDA 2370 [QBLB]
27289
27214
-
Thr
CGT
[ENA]
¡û
>W1810532660
QCYM01000009
Alphaproteobacteria
Labrenzia sp. 011 [QCYM]
124255
124330
+
Thr
CGT
[ENA]
¡û
>W1810670692
QJRY01000001
Alphaproteobacteria
Rhizobium wuzhouense W44 [QJRY]
974033
974108
+
Thr
CGT
[ENA]
¡û
>W1810671282
QJSR01000001
Alphaproteobacteria
Rhizobium sp. PP-CC-3A-592 [QJSR]
1203945
1204020
+
Thr
CGT
[ENA]
¡û
>W1810671356
QJSS01000012
Alphaproteobacteria
Rhizobium sp. PP-WC-1G-195 [QJSS]
11868
11793
-
Thr
CGT
[ENA]
¡û
>W1810671458
QJSV01000001
Alphaproteobacteria
Rhizobium sp. PP-F2F-G20b [QJSV]
929786
929861
+
Thr
CGT
[ENA]
¡û
>W1810694699
QLMF01000003
Alphaproteobacteria
Rhizobium etli R22G [QLMF]
125893
125818
-
Thr
CGT
[ENA]
¡û
>C151016681
CP007045
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii WSM1689 [CP007045]
169309
169234
-
Thr
CGT
[Ensembl]
¡û
>C151016915
CP007067
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii CB782 [CP007067]
148495
148420
-
Thr
CGT
[Ensembl]
¡û
>C151083099
CP011479
Alphaproteobacteria
Hoeflea sp. IMCC20628 [CP011479]
3886215
3886140
-
Thr
CGT
[Ensembl]
¡û
>C151101676
HG938353
Alphaproteobacteria
Neorhizobium galegae bv. orientalis str. HAMBI 540 [HG938353]
101442
101367
-
Thr
CGT
[Ensembl]
¡û
>C151101723
HG938355
Alphaproteobacteria
Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI HAMBI 1141 [HG938355]
107652
107577
-
Thr
CGT
[Ensembl]
¡û
>W1510052863
CCRG01000003
Alphaproteobacteria
Neorhizobium galegae bv. officinalis [CCRG]
328463
328388
-
Thr
CGT
[ENA]
¡û
>W1510052903
CCRH01000001
Alphaproteobacteria
Neorhizobium galegae bv. officinalis [CCRH]
555854
555929
+
Thr
CGT
[ENA]
¡û
>W1510052955
CCRI01000003
Alphaproteobacteria
Neorhizobium galegae bv. officinalis [CCRI]
189444
189369
-
Thr
CGT
[ENA]
¡û
>W1510052992
CCRJ01000002
Alphaproteobacteria
Neorhizobium galegae bv. orientalis [CCRJ]
439855
439930
+
Thr
CGT
[ENA]
¡û
>W1510053037
CCRK01000001
Alphaproteobacteria
Neorhizobium galegae bv. officinalis [CCRK]
226392
226317
-
Thr
CGT
[ENA]
¡û
>W1510053112
CCRL01000018
Alphaproteobacteria
Neorhizobium galegae bv. orientalis [CCRL]
93877
93802
-
Thr
CGT
[ENA]
¡û
>W1510053147
CCRM01000015
Alphaproteobacteria
Neorhizobium galegae bv. orientalis [CCRM]
93874
93799
-
Thr
CGT
[ENA]
¡û
>W1510053167
CCRN01000001
Alphaproteobacteria
Neorhizobium galegae bv. orientalis [CCRN]
481282
481207
-
Thr
CGT
[ENA]
¡û
>W1511347470
JRJG01000014
Alphaproteobacteria
Hoeflea sp. BAL378 [JRJG]
1768
1843
+
Thr
CGT
[ENA]
¡û
>W1511358843
JRXL01000012
Alphaproteobacteria
Rhizobium brockwellii bv. trifolii CC275e [JRXL]
656135
656060
-
Thr
CGT
[ENA]
¡û
>W1511432736
JUGS01000008
Alphaproteobacteria
Rhizobium rhizogenes CF262 [JUGS]
288971
288896
-
Thr
CGT
[ENA]
¡û
>W1511433443
JUHF01000008
Alphaproteobacteria
Rhizobium rhizogenes CF263 [JUHF]
2580032
2580107
+
Thr
CGT
[ENA]
¡û
>W1511433505
JUHG01000014
Alphaproteobacteria
Rhizobium rhizogenes OV677 [JUHG]
419620
419545
-
Thr
CGT
[ENA]
¡û
>W1511433627
JUHJ01000003
Alphaproteobacteria
Rhizobium sp. YR528 [JUHJ]
436178
436103
-
Thr
CGT
[ENA]
¡û
>W1511433692
JUHK01000009
Alphaproteobacteria
Rhizobium tropici CF286 [JUHK]
102871
102946
+
Thr
CGT
[ENA]
¡û
>W1511433962
JUHP01000002
Alphaproteobacteria
Rhizobium rhizogenes YR530 [JUHP]
289023
288948
-
Thr
CGT
[ENA]
¡û
>W1511433991
JUHQ01000006
Alphaproteobacteria
Rhizobium tropici YR635 [JUHQ]
109322
109397
+
Thr
CGT
[ENA]
¡û
>W1511434099
JUHS01000010
Alphaproteobacteria
Rhizobium leguminosarum CF307 [JUHS]
185627
185552
-
Thr
CGT
[ENA]
¡û
>W1511434129
JUHT01000010
Alphaproteobacteria
Rhizobium lusitanum YR374 [JUHT]
136577
136652
+
Thr
CGT
[ENA]
¡û
>W1511434163
JUHU01000001
Alphaproteobacteria
Rhizobium leguminosarum OV152 [JUHU]
111001
111076
+
Thr
CGT
[ENA]
¡û
>W1511509169
JXQV01000011
Alphaproteobacteria
Agrobacterium tumefaciens MEJ076 [JXQV]
29522
29447
-
Thr
CGT
[ENA]
¡û
>W1511681337
LFIO01000459
Alphaproteobacteria
Rhizobium ecuadorense CNPSO 671 [LFIO]
36960
36885
-
Thr
CGT
[ENA]
¡û
>C161050764
CP013068
Alphaproteobacteria
Pannonibacter phragmitetus 31801 [CP013068]
1705933
1706008
+
Thr
CGT
[Ensembl]
¡û
>C161057993
CP013630
Alphaproteobacteria
Rhizobium sp. N324 [CP013630]
553800
553725
-
Thr
CGT
-
¡û
>C161058042
CP013636
Alphaproteobacteria
Rhizobium sp. N541 [CP013636]
572303
572228
-
Thr
CGT
-
¡û
>C161058091
CP013643
Alphaproteobacteria
Rhizobium sp. N941 [CP013643]
572303
572228
-
Thr
CGT
[Ensembl]
¡û
>C161095825
CP016286
Alphaproteobacteria
Rhizobium leguminosarum Vaf10 [CP016286]
4622855
4622780
-
Thr
CGT
-
¡û
>W121002985
AEYF01000044
Alphaproteobacteria
Rhizobium sp. CCGE 510 [AEYF]
366867
366942
+
Thr
CGT
[ENA]
¡û
>W121044145
AHZC01000419
Alphaproteobacteria
Rhizobium sp. PDO1-076 [AHZC]
41922
41847
-
Thr
CGT
[ENA]
¡û
>W121068158
AJUF01000009
Alphaproteobacteria
Rhizobium leguminosarum bv. viciae WSM1455 [AJUF]
499906
499831
-
Thr
CGT
[ENA]
¡û
>W121068238
AJUH01000020
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii WU95 [AJUH]
472404
472329
-
Thr
CGT
[ENA]
¡û
>W121068281
AJUJ01000051
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii WSM2012 [AJUJ]
12503
12578
+
Thr
CGT
[ENA]
¡û
>W121068348
AJUK01000027
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii WSM2297 [AJUK]
477933
477858
-
Thr
CGT
[ENA]
¡û
>W121069006
AJVM01000063
Alphaproteobacteria
Rhizobium sp. AP16 [AJVM]
132081
132006
-
Thr
CGT
[ENA]
¡û
>W121084282
AKHZ01000014
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii WSM597 [AKHZ]
249637
249712
+
Thr
CGT
[ENA]
¡û
>W121086615
AKKC01000115
Alphaproteobacteria
Rhizobium sp. CF080 [AKKC]
12180
12105
-
Thr
CGT
[ENA]
¡û
>W1610436547
FJUR01000001
Alphaproteobacteria
Rhizobium sp. 9140 [FJUR]
1202492
1202417
-
Thr
CGT
[ENA]
¡û
>W1610514479
FMAF01000008
Alphaproteobacteria
Rhizobium lusitanum [FMAF]
26741
26816
+
Thr
CGT
[ENA]
¡û
>W1610540277
JSEP01000005
Alphaproteobacteria
Labrenzia sp. OB1 [JSEP]
35116
35191
+
Thr
CGT
[ENA]
¡û
>W1610616412
LGLV01000004
Alphaproteobacteria
Pararhizobium polonicum [LGLV]
267830
267905
+
Thr
CGT
[ENA]
¡û
>W1610649064
LJHS01000002
Alphaproteobacteria
Rhizobium sp. AAP43 [LJHS]
57532
57607
+
Thr
CGT
[ENA]
¡û
>W1610649465
LJIB01000008
Alphaproteobacteria
Rhizobium sp. AAP116 [LJIB]
123573
123648
+
Thr
CGT
[ENA]
¡û
>W1610661001
LJSR01000003
Alphaproteobacteria
Rhizobium acidisoli [LJSR]
28789
28864
+
Thr
CGT
[ENA]
¡û
>W1610720585
LMAU01000005
Alphaproteobacteria
Tsuneonella troitsensis [LMAU]
75716
75641
-
Thr
CGT
[ENA]
¡û
>W1610722775
LMCW01000001
Alphaproteobacteria
Rhizobium sp. Root1203 [LMCW]
1538
1463
-
Thr
CGT
[ENA]
¡û
>W1610722895
LMCZ01000001
Alphaproteobacteria
Rhizobium sp. Root1204 [LMCZ]
311525
311600
+
Thr
CGT
[ENA]
¡û
>W1610723846
LMDR01000001
Alphaproteobacteria
Rhizobium sp. Root1240 [LMDR]
1302013
1302088
+
Thr
CGT
[ENA]
¡û
>W1610725565
LMEY01000001
Alphaproteobacteria
Rhizobium sp. Root1334 [LMEY]
1007866
1007941
+
Thr
CGT
[ENA]
¡û
>W1610725691
LMFA01000023
Alphaproteobacteria
Rhizobium sp. Root482 [LMFA]
311601
311526
-
Thr
CGT
[ENA]
¡û
>W1610729218
LMHV01000012
Alphaproteobacteria
Rhizobium sp. Root708 [LMHV]
312043
311968
-
Thr
CGT
[ENA]
¡û
>W1610729699
LMIF01000001
Alphaproteobacteria
Rhizobium sp. Root73 [LMIF]
1008007
1008082
+
Thr
CGT
[ENA]
¡û
>W1610730897
LMJE01000001
Alphaproteobacteria
Rhizobium sp. Root274 [LMJE]
1302012
1302087
+
Thr
CGT
[ENA]
¡û
>W1610735395
LMMM01000012
Alphaproteobacteria
Rhizobium sp. Leaf262 [LMMM]
285970
286045
+
Thr
CGT
[ENA]
¡û
>W1610738713
LMPE01000003
Alphaproteobacteria
Rhizobium sp. Leaf341 [LMPE]
720901
720976
+
Thr
CGT
[ENA]
¡û
>W1610739736
LMQB01000023
Alphaproteobacteria
Rhizobium sp. Leaf371 [LMQB]
249393
249468
+
Thr
CGT
[ENA]
¡û
>W1610739814
LMQD01000001
Alphaproteobacteria
Rhizobium sp. Leaf383 [LMQD]
357215
357290
+
Thr
CGT
[ENA]
¡û
>W1610739870
LMQE01000001
Alphaproteobacteria
Rhizobium sp. Leaf384 [LMQE]
1351679
1351754
+
Thr
CGT
[ENA]
¡û
>W1610745161
LMVL01000040
Alphaproteobacteria
Agrobacterium vitis [LMVL]
139997
139922
-
Thr
CGT
[ENA]
¡û
>W1610774514
LNUW01000036
Alphaproteobacteria
Agrobacterium bohemicum R89-1 [LNUW]
256714
256789
+
Thr
CGT
[ENA]
¡û
>W1610978952
LVYU01000139
Alphaproteobacteria
Rhizobium leguminosarum [LVYU]
32821
32896
+
Thr
CGT
[ENA]
¡û
>W1610980666
LWBS01000032
Alphaproteobacteria
Rhizobium leguminosarum [LWBS]
5233
5308
+
Thr
CGT
[ENA]
¡û
>W1610990639
LWMO01000047
Alphaproteobacteria
Rhizobium anhuiense WYCCWR10015 [LWMO]
53287
53362
+
Thr
CGT
[ENA]
¡û
>W1610995841
LXFU01000025
Alphaproteobacteria
Rhizobium sp. WYCCWR10014 [LXFU]
280508
280433
-
Thr
CGT
[ENA]
¡û
>W1611000627
LXKM01000023
Alphaproteobacteria
Agrobacterium sp. 13-626 [LXKM]
285722
285647
-
Thr
CGT
[ENA]
¡û
>W1611000699
LXKO01000001
Alphaproteobacteria
Rhizobium sp. AC44/96 [LXKO]
205709
205634
-
Thr
CGT
[ENA]
¡û
>W1611000768
LXKP01000016
Alphaproteobacteria
Agrobacterium sp. B131/95 [LXKP]
415988
415913
-
Thr
CGT
[ENA]
¡û
>W1611000806
LXKQ01000023
Alphaproteobacteria
Agrobacterium sp. B133/95 [LXKQ]
381582
381657
+
Thr
CGT
[ENA]
¡û
>W1611001019
LXKU01000020
Alphaproteobacteria
Agrobacterium rubi [LXKU]
473043
473118
+
Thr
CGT
[ENA]
¡û
>W1611054757
MAMO01000002
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii [MAMO]
110429
110504
+
Thr
CGT
[ENA]
¡û
>W1710436283
FJUR01000001
Alphaproteobacteria
Rhizobium sp. 9140 [FJUR]
1202492
1202417
-
Thr
CGT
[ENA]
¡û
>W1710500169
FMAF01000008
Alphaproteobacteria
Rhizobium lusitanum [FMAF]
26741
26816
+
Thr
CGT
[ENA]
¡û
>W1710552189
FOGR01000002
Alphaproteobacteria
Rhizobium sp. NFR03 [FOGR]
463087
463012
-
Thr
CGT
[ENA]
¡û
>W1710556790
FOKM01000002
Alphaproteobacteria
Rhizobium sp. NFR07 [FOKM]
594653
594578
-
Thr
CGT
[ENA]
¡û
>W1710596532
FTMQ01000001
Alphaproteobacteria
Rhizobium sp. RU33A [FTMQ]
450744
450669
-
Thr
CGT
[ENA]
¡û
>W1710606423
FWXU01000037
Alphaproteobacteria
Rhizobium sp. RU36D [FWXU]
20389
20464
+
Thr
CGT
[ENA]
¡û
>W1710643298
JSEP01000005
Alphaproteobacteria
Labrenzia sp. OB1 [JSEP]
35116
35191
+
Thr
CGT
[ENA]
¡û
>W1710737658
LGLV01000004
Alphaproteobacteria
Pararhizobium polonicum [LGLV]
267830
267905
+
Thr
CGT
[ENA]
¡û
Select
Sequence ID
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(or Accession No.)
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(Sample source for ENV)
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Direction
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Genome/Seq. Info.
Decision
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Representative sequence of each cluster
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