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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
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1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.238015 (71 seq.)
>W1710809616
LKEQ01000009
Alphaproteobacteria
Wolbachia endosymbiont of Trichogramma pretiosum [LKEQ]
83601
83529
-
Val
TAC
[ENA]
¡û
>W1711055060
LRUH01000044
Alphaproteobacteria
Wolbachia endosymbiont of Laodelphax striatellus of Laodelphax striatella [LRUH]
20214
20286
+
Val
TAC
[ENA]
¡û
>W1711088433
LSYX01000060
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYX]
444
372
-
Val
TAC
[ENA]
¡û
>W1711088496
LSYY01000168
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYY]
4268
4196
-
Val
TAC
[ENA]
¡û
>W1711258805
LYUV01000001
Alphaproteobacteria
Wolbachia endosymbiont of Nomada leucophthalma [LYUV]
45500
45428
-
Val
TAC
[ENA]
¡û
>W1711258839
LYUW01000002
Alphaproteobacteria
Wolbachia endosymbiont of Nomada flava [LYUW]
45659
45587
-
Val
TAC
[ENA]
¡û
>W1711258879
LYUX01000005
Alphaproteobacteria
Wolbachia endosymbiont of Nomada panzeri [LYUX]
6823
6895
+
Val
TAC
[ENA]
¡û
>W1711258910
LYUY01000003
Alphaproteobacteria
Wolbachia endosymbiont of Nomada ferruginata [LYUY]
22057
21985
-
Val
TAC
[ENA]
¡û
>W1711745721
MUJL01000115
Alphaproteobacteria
Wolbachia pipientis wUni [MUJL]
24297
24225
-
Val
TAC
[ENA]
¡û
>W1711745745
MUJM01000083
Alphaproteobacteria
Wolbachia pipientis wVitA [MUJM]
17302
17230
-
Val
TAC
[ENA]
¡û
>W1712108439
NJBR01000091
Alphaproteobacteria
Wolbachia endosymbiont of Wuchereria bancrofti [NJBR]
6215
6287
+
Val
TAC
[ENA]
¡û
>W131052823
AMZJ01000064
Alphaproteobacteria
Wolbachia endosymbiont of Diaphorina citri [AMZJ]
22788
22860
+
Val
TAC
[ENA]
¡û
>W131242646
CAOH01000082
Alphaproteobacteria
Wolbachia pipientis wBol1-b [CAOH]
124115
124187
+
Val
TAC
[ENA]
¡û
>W131243127
CAOU02000038
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila suzukii str. valsugana of Drosophila suzukii [CAOU]
8116
8044
-
Val
TAC
[ENA]
¡û
>C026840
AE017196
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila melanogaster wMel [AE017196]
1152220
1152148
-
Val
TAC
[Ensembl]
¡û
>C026882
AE017321
Alphaproteobacteria
Wolbachia endosymbiont strain TRS of Brugia malayi [AE017321]
523770
523698
-
Val
TAC
[Ensembl]
¡û
>w016795
AAQP01000026
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila willistoni of Drosophila willistoni TSC#14030-0811.24 [AAQP]
5696
5621
-
Val
TAC
[ENA]
¡û
>W141001031
ADHD01000439
Alphaproteobacteria
Wolbachia endosymbiont of Wuchereria bancrofti [ADHD]
578
506
-
Val
TAC
[ENA]
¡û
>w005393
AAGB01000004
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae [AAGB]
19173
19248
+
Val
TAC
[ENA]
¡û
>W141065613
AQQE01000003
Alphaproteobacteria
Wolbachia pipientis wMelPop [AQQE]
21514
21442
-
Val
TAC
[ENA]
¡û
>WENV181405260
OGCC01003760
[OGCC] insect metagenome; haemolymph
460
532
+
Val
TAC
[ENA]
¢þ
>WENV181405289
OGCD01000041
[OGCD] insect metagenome; haemolymph
9843
9915
+
Val
TAC
[ENA]
¢þ
>WENV181406121
OGCF01007444
[OGCF] insect metagenome; haemolymph
545
473
-
Val
TAC
[ENA]
¢þ
>W141145105
AWUH01000195
Alphaproteobacteria
Wolbachia endosymbiont of Glossina morsitans morsitans [AWUH]
2968
2896
-
Val
TAC
[ENA]
¡û
>W141240224
CAGB01000117
Alphaproteobacteria
Wolbachia pipientis wAlbB [CAGB]
33549
33477
-
Val
TAC
[ENA]
¡û
>C08011417
AM999887
Alphaproteobacteria
Wolbachia endosymbiont of Culex quinquefasciatus Pel wPip [AM999887]
1023015
1022943
-
Val
TAC
[Ensembl]
¡û
>W09113853
ABZA01000001
Alphaproteobacteria
Wolbachia endosymbiont of Culex quinquefasciatus of Culex quinquefasciatus JHB [ABZA]
246900
246828
-
Val
TAC
[ENA]
¡û
>W09121823
ACFP01000226
Alphaproteobacteria
Wolbachia endosymbiont of Muscidifurax uniraptor [ACFP]
16471
16543
+
Val
TAC
[ENA]
¡û
>C181017558
CP015510
Alphaproteobacteria
Wolbachia endosymbiont of Folsomia candida Berlin [CP015510]
1015656
1015728
+
Val
TAC
-
¡û
>C181124891
CP025989
Alphaproteobacteria
Candidatus Fokinia solitaria [CP025989]
596219
596294
+
Val
TAC
-
¡û
>C191074332
CP031221
Alphaproteobacteria
Wolbachia pipientis wAlbB [CP031221]
1476661
1476589
-
Val
TAC
-
¡û
>C191123109
CP034333
Alphaproteobacteria
Wolbachia endosymbiont of Brugia malayi [CP034333]
936362
936290
-
Val
TAC
-
¡û
>C191123161
CP034334
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila mauritiana wMau [CP034334]
46346
46274
-
Val
TAC
-
¡û
>C191123195
CP034335
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila mauritiana wMau [CP034335]
46347
46275
-
Val
TAC
-
¡û
>C191188737
CP041215
Alphaproteobacteria
Wolbachia endosymbiont of Carposina sasakii [CP041215]
175683
175611
-
Val
TAC
-
¡û
>W141812295
JQAM01000036
Alphaproteobacteria
Wolbachia pipientis [JQAM]
62039
61967
-
Val
TAC
[ENA]
¡û
>W1910213468
FMKF01000070
Alphaproteobacteria
Wolbachia endosymbiont of Bemisia tabaci [FMKF]
2820
2748
-
Val
TAC
[ENA]
¡û
>W1910753967
MKIF01000095
Alphaproteobacteria
Wolbachia sp. wRi [MKIF]
333
405
+
Val
TAC
[ENA]
¡û
>W1910759047
MLZJ01000166
Alphaproteobacteria
Wolbachia sp. wMel_KL [MLZJ]
364
436
+
Val
TAC
[ENA]
¡û
>W1910760294
MNCG01000166
Alphaproteobacteria
Wolbachia sp. wMel_AMD [MNCG]
364
436
+
Val
TAC
[ENA]
¡û
>W1910794351
MRWX01000006
Alphaproteobacteria
Wolbachia pipientis wAus [MRWX]
25372
25444
+
Val
TAC
[ENA]
¡û
>W1910802369
MSYL01000288
Alphaproteobacteria
Wolbachia sp. wRi_2 [MSYL]
1358
1286
-
Val
TAC
[ENA]
¡û
>C09111271
CP001391
Alphaproteobacteria
Wolbachia sp. wRi [CP001391]
1274403
1274331
-
Val
TAC
[Ensembl]
¡û
>W1911239456
NSDR01000057
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_India [NSDR]
7892
7820
-
Val
TAC
[ENA]
¡û
>W1911239490
NSDS01000042
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_Hawaii [NSDS]
7838
7766
-
Val
TAC
[ENA]
¡û
>W1911239527
NSDT01000057
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_Indonesia [NSDT]
7892
7820
-
Val
TAC
[ENA]
¡û
>W1911281133
NTHL01000088
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila subpulchrella of Drosophila subpulchrella wSpc [NTHL]
8755
8683
-
Val
TAC
[ENA]
¡û
>W1911412172
NWVH01000127
Alphaproteobacteria
Wolbachia pipientis FL2016 [NWVH]
2951
3023
+
Val
TAC
[ENA]
¡û
>W1911412204
NWVI01000116
Alphaproteobacteria
Wolbachia pipientis HN2016 [NWVI]
3078
3150
+
Val
TAC
[ENA]
¡û
>W1911412244
NWVJ01000061
Alphaproteobacteria
Wolbachia pipientis HN2016 [NWVJ]
1450
1522
+
Val
TAC
[ENA]
¡û
>W1911412286
NWVK01000077
Alphaproteobacteria
Wolbachia pipientis FL2016 [NWVK]
537
465
-
Val
TAC
[ENA]
¡û
>W1911545108
OUNE01000050
Alphaproteobacteria
Wolbachia endosymbiont of Aleurodicus dispersus WBAD (OUNE) of Aleurodicus dispersus WBAD [OUNE]
23768
23840
+
Val
TAC
[ENA]
¡û
>W1911545135
OUNF01000018
Alphaproteobacteria
Wolbachia endosymbiont of Aleurodicus floccissimus WBAF (OUNF) of Aleurodicus floccissimus WBAF [OUNF]
34139
34067
-
Val
TAC
[ENA]
¡û
>W1810758336
QPIP01000010
Alphaproteobacteria
Wolbachia endosymbiont of Cylisticus convexus of Cylisticus convexus Wcon [QPIP]
26868
26796
-
Val
TAC
[ENA]
¡û
>C151001128
AP013028
Alphaproteobacteria
Wolbachia endosymbiont of Cimex lectularius wCle [AP013028]
755342
755417
+
Val
TAC
[Ensembl]
¡û
>C151102216
LK055284
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wAu [LK055284]
1152184
1152112
-
Val
TAC
[Ensembl]
¡û
>W1510562619
CTEH01000074
Alphaproteobacteria
Wolbachia endosymbiont of Culex molestus wPip_Mol of Culex molestus [CTEH]
126
54
-
Val
TAC
[ENA]
¡û
>W1511183983
JMCJ01000966
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus of Dactylopius coccus wCoc1 [JMCJ]
756
684
-
Val
TAC
[ENA]
¡û
>W1511536234
JYPC01000104
Alphaproteobacteria
Wolbachia endosymbiont of Operophtera brumata of Operophtera brumata Ob_Wba [JYPC]
6052
5980
-
Val
TAC
[ENA]
¡û
>W11145948
AERW01000236
Alphaproteobacteria
Wolbachia endosymbiont of Nasonia vitripennis wVitB of Nasonia vitripennis [AERW]
3844
3772
-
Val
TAC
[ENA]
¡û
>W11185734
CACK01000098
Alphaproteobacteria
Wolbachia endosymbiont of Culex pipiens molestus [CACK]
4867
4939
+
Val
TAC
[ENA]
¡û
>C131009116
CP003883
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wNo [CP003883]
653398
653470
+
Val
TAC
[Ensembl]
¡û
>C131009156
CP003884
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wHa [CP003884]
1179504
1179432
-
Val
TAC
[Ensembl]
¡û
>W1610673722
LKEQ01000009
Alphaproteobacteria
Wolbachia endosymbiont of Trichogramma pretiosum [LKEQ]
83601
83529
-
Val
TAC
[ENA]
¡û
>W1610896106
LRUH01000044
Alphaproteobacteria
Wolbachia endosymbiont of Laodelphax striatellus of Laodelphax striatella [LRUH]
20214
20286
+
Val
TAC
[ENA]
¡û
>W1610922972
LSYX01000060
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYX]
444
372
-
Val
TAC
[ENA]
¡û
>W1610923035
LSYY01000168
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYY]
4268
4196
-
Val
TAC
[ENA]
¡û
>W1611021070
LYUV01000001
Alphaproteobacteria
Wolbachia endosymbiont of Nomada leucophthalma [LYUV]
45500
45428
-
Val
TAC
[ENA]
¡û
>W1611021104
LYUW01000002
Alphaproteobacteria
Wolbachia endosymbiont of Nomada flava [LYUW]
45659
45587
-
Val
TAC
[ENA]
¡û
>W1611021144
LYUX01000005
Alphaproteobacteria
Wolbachia endosymbiont of Nomada panzeri [LYUX]
6823
6895
+
Val
TAC
[ENA]
¡û
>W1611021175
LYUY01000003
Alphaproteobacteria
Wolbachia endosymbiont of Nomada ferruginata [LYUY]
22057
21985
-
Val
TAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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