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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
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1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.238020 (68 seq.)
>W1710809594
LKEQ01000006
Alphaproteobacteria
Wolbachia endosymbiont of Trichogramma pretiosum [LKEQ]
225958
225884
-
Val
GAC
[ENA]
¡û
>W1711055068
LRUH01000061
Alphaproteobacteria
Wolbachia endosymbiont of Laodelphax striatellus of Laodelphax striatella [LRUH]
133
206
+
Val
GAC
[ENA]
¡û
>W1711088448
LSYX01000097
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYX]
6516
6443
-
Val
GAC
[ENA]
¡û
>W1711088499
LSYY01000188
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYY]
10327
10254
-
Val
GAC
[ENA]
¡û
>W1711258828
LYUV01000053
Alphaproteobacteria
Wolbachia endosymbiont of Nomada leucophthalma [LYUV]
8342
8269
-
Val
GAC
[ENA]
¡û
>W1711258862
LYUW01000052
Alphaproteobacteria
Wolbachia endosymbiont of Nomada flava [LYUW]
1730
1803
+
Val
GAC
[ENA]
¡û
>W1711258897
LYUX01000054
Alphaproteobacteria
Wolbachia endosymbiont of Nomada panzeri [LYUX]
1730
1803
+
Val
GAC
[ENA]
¡û
>W1711258918
LYUY01000012
Alphaproteobacteria
Wolbachia endosymbiont of Nomada ferruginata [LYUY]
1730
1803
+
Val
GAC
[ENA]
¡û
>W1711466309
MJMG01000001
Alphaproteobacteria
Wolbachia pipientis [MJMG]
284786
284859
+
Val
GAC
[ENA]
¡û
>W1711745716
MUJL01000099
Alphaproteobacteria
Wolbachia pipientis wUni [MUJL]
20270
20343
+
Val
GAC
[ENA]
¡û
>W1711745739
MUJM01000064
Alphaproteobacteria
Wolbachia pipientis wVitA [MUJM]
3750
3823
+
Val
GAC
[ENA]
¡û
>W1712108423
NJBR01000022
Alphaproteobacteria
Wolbachia endosymbiont of Wuchereria bancrofti [NJBR]
20179
20106
-
Val
GAC
[ENA]
¡û
>W131052830
AMZJ01000074
Alphaproteobacteria
Wolbachia endosymbiont of Diaphorina citri [AMZJ]
4945
5020
+
Val
GAC
[ENA]
¡û
>W131242654
CAOH01000086
Alphaproteobacteria
Wolbachia pipientis wBol1-b [CAOH]
17205
17130
-
Val
GAC
[ENA]
¡û
>W131243120
CAOU02000035
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila suzukii str. valsugana of Drosophila suzukii [CAOU]
26513
26586
+
Val
GAC
[ENA]
¡û
>C026835
AE017196
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila melanogaster wMel [AE017196]
1004086
1004158
+
Val
GAC
[Ensembl]
¡û
>C026884
AE017321
Alphaproteobacteria
Wolbachia endosymbiont strain TRS of Brugia malayi [AE017321]
491215
491143
-
Val
GAC
[Ensembl]
¡û
>w016799
AAQP01000054
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila willistoni of Drosophila willistoni TSC#14030-0811.24 [AAQP]
3142
3065
-
Val
GAC
[ENA]
¡û
>W141001020
ADHD01000146
Alphaproteobacteria
Wolbachia endosymbiont of Wuchereria bancrofti [ADHD]
1162
1089
-
Val
GAC
[ENA]
¡û
>w005399
AAGB01000017
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae [AAGB]
3971
4048
+
Val
GAC
[ENA]
¡û
>W141065640
AQQE01000063
Alphaproteobacteria
Wolbachia pipientis wMelPop [AQQE]
39694
39767
+
Val
GAC
[ENA]
¡û
>WENV181405230
OGCC01000109
[OGCC] insect metagenome; haemolymph
79
152
+
Val
GAC
[ENA]
¢þ
>WENV181405281
OGCD01000015
[OGCD] insect metagenome; haemolymph
9614
9687
+
Val
GAC
[ENA]
¢þ
>WENV181406099
OGCF01000203
[OGCF] insect metagenome; haemolymph
4180
4107
-
Val
GAC
[ENA]
¢þ
>W141145076
AWUH01000020
Alphaproteobacteria
Wolbachia endosymbiont of Glossina morsitans morsitans [AWUH]
1413
1486
+
Val
GAC
[ENA]
¡û
>W141240205
CAGB01000003
Alphaproteobacteria
Wolbachia pipientis wAlbB [CAGB]
4032
4107
+
Val
GAC
[ENA]
¡û
>C08011413
AM999887
Alphaproteobacteria
Wolbachia endosymbiont of Culex quinquefasciatus Pel wPip [AM999887]
1194022
1193947
-
Val
GAC
[Ensembl]
¡û
>W09113849
ABZA01000001
Alphaproteobacteria
Wolbachia endosymbiont of Culex quinquefasciatus of Culex quinquefasciatus JHB [ABZA]
419742
419667
-
Val
GAC
[ENA]
¡û
>W09121809
ACFP01000154
Alphaproteobacteria
Wolbachia endosymbiont of Muscidifurax uniraptor [ACFP]
1016
1089
+
Val
GAC
[ENA]
¡û
>C191074337
CP031221
Alphaproteobacteria
Wolbachia pipientis wAlbB [CP031221]
1119055
1118982
-
Val
GAC
-
¡û
>C191123111
CP034333
Alphaproteobacteria
Wolbachia endosymbiont of Brugia malayi [CP034333]
903807
903734
-
Val
GAC
-
¡û
>C191123132
CP034334
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila mauritiana wMau [CP034334]
250420
250493
+
Val
GAC
-
¡û
>C191123166
CP034335
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila mauritiana wMau [CP034335]
250422
250495
+
Val
GAC
-
¡û
>C191188722
CP041215
Alphaproteobacteria
Wolbachia endosymbiont of Carposina sasakii [CP041215]
1437526
1437453
-
Val
GAC
-
¡û
>W141812288
JQAM01000030
Alphaproteobacteria
Wolbachia pipientis [JQAM]
3855
3928
+
Val
GAC
[ENA]
¡û
>W1910753963
MKIF01000082
Alphaproteobacteria
Wolbachia sp. wRi [MKIF]
258
331
+
Val
GAC
[ENA]
¡û
>W1910759043
MLZJ01000151
Alphaproteobacteria
Wolbachia sp. wMel_KL [MLZJ]
3815
3888
+
Val
GAC
[ENA]
¡û
>W1910760290
MNCG01000152
Alphaproteobacteria
Wolbachia sp. wMel_AMD [MNCG]
3815
3888
+
Val
GAC
[ENA]
¡û
>W1910794371
MRWX01000047
Alphaproteobacteria
Wolbachia pipientis wAus [MRWX]
7906
7833
-
Val
GAC
[ENA]
¡û
>C09111265
CP001391
Alphaproteobacteria
Wolbachia sp. wRi [CP001391]
1168180
1168253
+
Val
GAC
[Ensembl]
¡û
>W1911239452
NSDR01000044
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_India [NSDR]
9711
9638
-
Val
GAC
[ENA]
¡û
>W1911239493
NSDS01000053
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_Hawaii [NSDS]
9657
9584
-
Val
GAC
[ENA]
¡û
>W1911239541
NSDT01000103
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_Indonesia [NSDT]
9711
9638
-
Val
GAC
[ENA]
¡û
>W1911281120
NTHL01000078
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila subpulchrella of Drosophila subpulchrella wSpc [NTHL]
10574
10501
-
Val
GAC
[ENA]
¡û
>W1911412163
NWVH01000070
Alphaproteobacteria
Wolbachia pipientis FL2016 [NWVH]
368
441
+
Val
GAC
[ENA]
¡û
>W1911412202
NWVI01000097
Alphaproteobacteria
Wolbachia pipientis HN2016 [NWVI]
10293
10220
-
Val
GAC
[ENA]
¡û
>W1911412245
NWVJ01000066
Alphaproteobacteria
Wolbachia pipientis HN2016 [NWVJ]
16580
16507
-
Val
GAC
[ENA]
¡û
>W1911412279
NWVK01000045
Alphaproteobacteria
Wolbachia pipientis FL2016 [NWVK]
4300
4373
+
Val
GAC
[ENA]
¡û
>W1911545121
OUNE01000115
Alphaproteobacteria
Wolbachia endosymbiont of Aleurodicus dispersus WBAD (OUNE) of Aleurodicus dispersus WBAD [OUNE]
310
383
+
Val
GAC
[ENA]
¡û
>W1911545160
OUNF01000402
Alphaproteobacteria
Wolbachia endosymbiont of Aleurodicus floccissimus WBAF (OUNF) of Aleurodicus floccissimus WBAF [OUNF]
4689
4762
+
Val
GAC
[ENA]
¡û
>W1810758327
QPIP01000001
Alphaproteobacteria
Wolbachia endosymbiont of Cylisticus convexus of Cylisticus convexus Wcon [QPIP]
67051
66978
-
Val
GAC
[ENA]
¡û
>C151001147
AP013028
Alphaproteobacteria
Wolbachia endosymbiont of Cimex lectularius wCle [AP013028]
496988
496914
-
Val
GAC
[Ensembl]
¡û
>C151102220
LK055284
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wAu [LK055284]
1038557
1038484
-
Val
GAC
[Ensembl]
¡û
>W1510562599
CTEH01000001
Alphaproteobacteria
Wolbachia endosymbiont of Culex molestus wPip_Mol of Culex molestus [CTEH]
145295
145220
-
Val
GAC
[ENA]
¡û
>W1511183981
JMCJ01000948
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus of Dactylopius coccus wCoc1 [JMCJ]
454
527
+
Val
GAC
[ENA]
¡û
>W1511536212
JYPC01000008
Alphaproteobacteria
Wolbachia endosymbiont of Operophtera brumata of Operophtera brumata Ob_Wba [JYPC]
1705
1778
+
Val
GAC
[ENA]
¡û
>W11145955
AERW01000263
Alphaproteobacteria
Wolbachia endosymbiont of Nasonia vitripennis wVitB of Nasonia vitripennis [AERW]
2432
2359
-
Val
GAC
[ENA]
¡û
>W11185719
CACK01000039
Alphaproteobacteria
Wolbachia endosymbiont of Culex pipiens molestus [CACK]
2829
2754
-
Val
GAC
[ENA]
¡û
>C131009121
CP003883
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wNo [CP003883]
854785
854860
+
Val
GAC
[Ensembl]
¡û
>C131009151
CP003884
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wHa [CP003884]
1031265
1031338
+
Val
GAC
[Ensembl]
¡û
>W1610673700
LKEQ01000006
Alphaproteobacteria
Wolbachia endosymbiont of Trichogramma pretiosum [LKEQ]
225958
225884
-
Val
GAC
[ENA]
¡û
>W1610896114
LRUH01000061
Alphaproteobacteria
Wolbachia endosymbiont of Laodelphax striatellus of Laodelphax striatella [LRUH]
133
206
+
Val
GAC
[ENA]
¡û
>W1610922987
LSYX01000097
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYX]
6516
6443
-
Val
GAC
[ENA]
¡û
>W1610923038
LSYY01000188
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYY]
10327
10254
-
Val
GAC
[ENA]
¡û
>W1611021093
LYUV01000053
Alphaproteobacteria
Wolbachia endosymbiont of Nomada leucophthalma [LYUV]
8342
8269
-
Val
GAC
[ENA]
¡û
>W1611021127
LYUW01000052
Alphaproteobacteria
Wolbachia endosymbiont of Nomada flava [LYUW]
1730
1803
+
Val
GAC
[ENA]
¡û
>W1611021162
LYUX01000054
Alphaproteobacteria
Wolbachia endosymbiont of Nomada panzeri [LYUX]
1730
1803
+
Val
GAC
[ENA]
¡û
>W1611021183
LYUY01000012
Alphaproteobacteria
Wolbachia endosymbiont of Nomada ferruginata [LYUY]
1730
1803
+
Val
GAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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