tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.239009 (137 seq.)
>W1710878075 LMQQ01000001 Betaproteobacteria Methylophilus sp. Leaf414 [LMQQ] 66659 66584 - Val TAC [ENA] ¡û
>W1710878097 LMQQ01000006 Betaproteobacteria Methylophilus sp. Leaf414 [LMQQ] 23699 23624 - Val TAC [ENA] ¡û
>W1710878149 LMQS01000001 Betaproteobacteria Methylophilus sp. Leaf416 [LMQS] 973130 973205 + Val TAC [ENA] ¡û
>W1710878159 LMQS01000001 Betaproteobacteria Methylophilus sp. Leaf416 [LMQS] 66618 66543 - Val TAC [ENA] ¡û
>W1710878376 LMQX01000001 Betaproteobacteria Methylophilus sp. Leaf459 [LMQX] 972845 972920 + Val TAC [ENA] ¡û
>W1710878386 LMQX01000001 Betaproteobacteria Methylophilus sp. Leaf459 [LMQX] 66023 65948 - Val TAC [ENA] ¡û
>W1710893291 LNEP01000001 Betaproteobacteria Betaproteobacteria bacterium Ga0077540 [LNEP] 370284 370359 + Val TAC [ENA] ¡û
>W1710893316 LNEP01000015 Betaproteobacteria Betaproteobacteria bacterium Ga0077540 [LNEP] 22817 22742 - Val TAC [ENA] ¡û
>W1711224646 LXUF01000001 Betaproteobacteria Methylovorus sp. MM2 MM1 [LXUF] 1215614 1215689 + Val TAC [ENA] ¡û
>W131163880 ARAC01000001 Betaproteobacteria Methylophilus sp. 42 [ARAC] 1512729 1512804 + Val TAC [ENA] ¡û
>W131163894 ARAC01000001 Betaproteobacteria Methylophilus sp. 42 [ARAC] 602795 602720 - Val TAC [ENA] ¡û
>W131164727 ARBA01000002 Betaproteobacteria Methylotenera mobilis 13 [ARBA] 800981 801056 + Val TAC [ENA] ¡û
>W131164740 ARBA01000002 Betaproteobacteria Methylotenera mobilis 13 [ARBA] 393298 393223 - Val TAC [ENA] ¡û
>W131170287 ARFK01000004 Betaproteobacteria Methylophilus sp. 1 [ARFK] 933627 933702 + Val TAC [ENA] ¡û
>W131170295 ARFK01000004 Betaproteobacteria Methylophilus sp. 1 [ARFK] 23686 23611 - Val TAC [ENA] ¡û
>W131176239 ARJW01000015 Betaproteobacteria Methylophilus methylotrophus DSM 46235 = ATCC 53528 [ARJW] 154020 153945 - Val TAC [ENA] ¡û
>W131176247 ARJW01000016 Betaproteobacteria Methylophilus methylotrophus DSM 46235 = ATCC 53528 [ARJW] 873016 873091 + Val TAC [ENA] ¡û
>W131186192 ARVX01000001 Betaproteobacteria Methylotenera versatilis 79 [ARVX] 1962363 1962438 + Val TAC [ENA] ¡û
>W131186201 ARVX01000001 Betaproteobacteria Methylotenera versatilis 79 [ARVX] 917212 917137 - Val TAC [ENA] ¡û
>W131186388 ARWC01000001 Betaproteobacteria Methylotenera sp. 1P/1 [ARWC] 1201431 1201506 + Val TAC [ENA] ¡û
>W131186418 ARWC01000001 Betaproteobacteria Methylotenera sp. 1P/1 [ARWC] 572527 572452 - Val TAC [ENA] ¡û
>W131186551 ARWF01000001 Betaproteobacteria Methylotenera sp. 73s [ARWF] 233061 233136 + Val TAC [ENA] ¡û
>W131186563 ARWF01000001 Betaproteobacteria Methylotenera sp. 73s [ARWF] 1796682 1796607 - Val TAC [ENA] ¡û
>W131176256 ARJX01000027 Betaproteobacteria Aromatoleum toluclasticum ATCC 700605 [ARJX] 23003 22928 - Val TAC [ENA] ¡û
>WENV180343029 OBLJ01250433 [OBLJ] soil metagenome; Clay 147 222 + Val TAC [ENA] ¢þ
>WENV180399156 OBQG01002501 [OBQG] marine metagenome; ENV:00002010 627 552 - Val TAC [ENA] ¢þ
>WENV181187813 OEOE01000017 [OEOE] activated sludge metagenome; Activated Sludge 1390 1465 + Val TAC [ENA] ¢þ
>WENV181187837 OEOE01000172 [OEOE] activated sludge metagenome; Activated Sludge 10013 10088 + Val TAC [ENA] ¢þ
>WENV181189283 OEOF01017606 [OEOF] activated sludge metagenome; Activated Sludge 617 692 + Val TAC [ENA] ¢þ
>WENV181190222 OEOF01615070 [OEOF] activated sludge metagenome; Activated Sludge 76 1 - Val TAC [ENA] ¢þ
>WENV181222631 OFDC01000036 [OFDC] hot springs metagenome; Water 165821 165896 + Val TAC [ENA] ¢þ
>WENV181222667 OFDC01000065 [OFDC] hot springs metagenome; Water 7129 7204 + Val TAC [ENA] ¢þ
>WENV181222904 OFDC01000574 [OFDC] hot springs metagenome; Water 18926 18851 - Val TAC [ENA] ¢þ
>WENV181226981 OFDN01000721 [OFDN] hot springs metagenome; Water 5834 5759 - Val TAC [ENA] ¢þ
>WENV181293909 OFHG01040720 [OFHG] soil metagenome; Clay 11 86 + Val TAC [ENA] ¢þ
>WENV181364849 OFPE01002485 [OFPE] sediment metagenome; Lake sediment 536 461 - Val TAC [ENA] ¢þ
>WENV181379754 OFRD01007670 [OFRD] wastewater metagenome; Exp Tend CN 100WW 1431 1356 - Val TAC [ENA] ¢þ
>WENV181731354 OGQD01000476 [OGQD] human gut metagenome; faeces 29600 29675 + Val TAC [ENA] ¢þ
>WENV181732173 OGQD01013974 [OGQD] human gut metagenome; faeces 829 904 + Val TAC [ENA] ¢þ
>WENV181843787 OGVU01064328 [OGVU] freshwater metagenome; freshwater 165 90 - Val TAC [ENA] ¢þ
>W141220061 AZXN01000001 Betaproteobacteria Methylophilus sp. 5 [AZXN] 2657892 2657967 + Val TAC [ENA] ¡û
>W141220069 AZXN01000001 Betaproteobacteria Methylophilus sp. 5 [AZXN] 1685018 1684943 - Val TAC [ENA] ¡û
>W141231901 BAUS01000002 Betaproteobacteria Methylophilus sp. OH31 [BAUS] 936428 936503 + Val TAC [ENA] ¡û
>W141231909 BAUS01000002 Betaproteobacteria Methylophilus sp. OH31 [BAUS] 23672 23597 - Val TAC [ENA] ¡û
>W141237762 BBJR01000025 Betaproteobacteria Comamonas aquatica NBRC 14918 [BBJR] 105420 105345 - Val TAC [ENA] ¡û
>W141237763 BBJR01000025 Betaproteobacteria Comamonas aquatica NBRC 14918 [BBJR] 105285 105210 - Val TAC [ENA] ¡û
>WENV182559020 OJDN01044577 [OJDN] seawater metagenome; Sea water 393 468 + Val TAC [ENA] ¢þ
>WENV182560478 OJDU01002658 [OJDU] seawater metagenome; Sea water 1965 1890 - Val TAC [ENA] ¢þ
>WENV182589881 OJIG01005716 [OJIG] seawater metagenome; Sea water 171 96 - Val TAC [ENA] ¢þ
>W141319078 JBOK01000031 Betaproteobacteria Comamonas aquatica DA1877 [JBOK] 27506 27581 + Val TAC [ENA] ¡û
>W141319089 JBOK01000062 Betaproteobacteria Comamonas aquatica DA1877 [JBOK] 72 147 + Val TAC [ENA] ¡û
>W141319090 JBOK01000062 Betaproteobacteria Comamonas aquatica DA1877 [JBOK] 207 282 + Val TAC [ENA] ¡û
>W141350149 JCKJ01000001 Betaproteobacteria Methylophilaceae bacterium 11 [JCKJ] 2076246 2076321 + Val TAC [ENA] ¡û
>W141350163 JCKJ01000001 Betaproteobacteria Methylophilaceae bacterium 11 [JCKJ] 1434703 1434628 - Val TAC [ENA] ¡û
>WENV170558279 CXWL01061204 [CXWL] groundwater metagenome; biofilm material 4815 4890 + Val TAC [ENA] ¢þ
>WENV170577516 FSSH01000106 [FSSH] freshwater metagenome; drinking water 117375 117300 - Val TAC [ENA] ¢þ
>WENV170606755 FUWD010727143 [FUWD] metagenome; unknown 6 81 + Val TAC [ENA] ¢þ
>WENV170705480 LNAO01000896 [LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 833 908 + Val TAC [ENA] ¢þ
>WENV170706419 LNAP01003043 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 9849 9774 - Val TAC [ENA] ¢þ
>WENV170706505 LNAP01003684 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 9361 9436 + Val TAC [ENA] ¢þ
>WENV170706927 LNAP01009090 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 5168 5093 - Val TAC [ENA] ¢þ
>WENV170709196 LNFM01000176 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 105716 105641 - Val TAC [ENA] ¢þ
>WENV170709453 LNFM01000368 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 22812 22737 - Val TAC [ENA] ¢þ
>WENV170709959 LNFM01000985 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 42418 42343 - Val TAC [ENA] ¢þ
>WENV170763889 LWDU01023843 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 258 183 - Val TAC [ENA] ¢þ
>WENV170961465 MLJW01000057 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 58910 58985 + Val TAC [ENA] ¢þ
>W141789909 JOUB01000005 Betaproteobacteria Delftia acidovorans [JOUB] 2253223 2253298 + Val TAC [ENA] ¡û
>W141819363 JQMG01000001 Betaproteobacteria Methylotenera sp. L2L1 [JQMG] 1933865 1933940 + Val TAC [ENA] ¡û
>W141819375 JQMG01000001 Betaproteobacteria Methylotenera sp. L2L1 [JQMG] 1523040 1522965 - Val TAC [ENA] ¡û
>W1910730020 MHBU01000001 Betaproteobacteria Methylotenera sp. RIFCSPLOWO2_02_FULL_45_14 [MHBU] 43633 43558 - Val TAC [ENA] ¡û
>W1910730039 MHBU01000029 Betaproteobacteria Methylotenera sp. RIFCSPLOWO2_02_FULL_45_14 [MHBU] 5126 5201 + Val TAC [ENA] ¡û
>W1910803587 MTBE01000017 Betaproteobacteria Diaphorobacter sp. LR2014-1 [MTBE] 1580 1655 + Val TAC [ENA] ¡û
>C09107797 CP001672 Betaproteobacteria Methylotenera mobilis JLW8 [CP001672] 1926927 1927002 + Val TAC [Ensembl] ¡û
>C09107808 CP001672 Betaproteobacteria Methylotenera mobilis JLW8 [CP001672] 1443473 1443398 - Val TAC [Ensembl] ¡û
>W1911244932 NSJF01000005 Betaproteobacteria Vandammella animalimorsus NML03-0146 [NSJF] 160870 160795 - Val TAC [ENA] ¡û
>W1911270513 NTBI01000004 Betaproteobacteria Vandammella animalimorsus NML91-0035 [NTBI] 197638 197713 + Val TAC [ENA] ¡û
>W1911623979 PQVH01000002 Betaproteobacteria Methylotenera oryzisoli La3113 [PQVH] 236970 237045 + Val TAC [ENA] ¡û
>W1911624004 PQVH01000012 Betaproteobacteria Methylotenera oryzisoli La3113 [PQVH] 161986 162061 + Val TAC [ENA] ¡û
>W1810088972 PGEJ01000004 Betaproteobacteria Alicycliphilus denitrificans CD02 [PGEJ] 230889 230814 - Val TAC [ENA] ¡û
>C151089452 CP012020 Betaproteobacteria Methylophilus sp. TWE2 [CP012020] 1550575 1550650 + Val TAC [Ensembl] ¡û
>C151089476 CP012020 Betaproteobacteria Methylophilus sp. TWE2 [CP012020] 575678 575603 - Val TAC [Ensembl] ¡û
>ENV09001315 ABSR01001258 Freshwater sediment metagenome lwMethylamine_C1 1064 1139 + Val TAC [ENA] ¡û
>ENV09001324 ABSR01001410 Freshwater sediment metagenome lwMethylamine_C1 2836 2911 + Val TAC [ENA] ¡û
>ENV09001336 ABSR01002106 Freshwater sediment metagenome lwMethylamine_C1 209 284 + Val TAC [ENA] ¡û
>ENV09001340 ABSR01002289 Freshwater sediment metagenome lwMethylamine_C1 581 506 - Val TAC [ENA] ¡û
>ENV09001381 ABSR01004080 Freshwater sediment metagenome lwMethylamine_C1 1458 1383 - Val TAC [ENA] ¡û
>ENV09001524 ABSR01024360 Freshwater sediment metagenome lwMethylamine_C1 349 274 - Val TAC [ENA] ¡û
>ENV09004004 ADIF01010131 Marine metagenome apSum_C1 395 320 - Val TAC [ENA] ¡û
>C10109362 CP002056 Betaproteobacteria Methylotenera versatilis 301 [CP002056] 2952121 2952046 - Val TAC [Ensembl] ¡û
>C10109370 CP002056 Betaproteobacteria Methylotenera versatilis 301 [CP002056] 1709356 1709281 - Val TAC [Ensembl] ¡û
>W1511431974 JUGE01000001 Betaproteobacteria Methylotenera sp. N17 [JUGE] 1734929 1735004 + Val TAC [ENA] ¡û
>W1511431994 JUGE01000001 Betaproteobacteria Methylotenera sp. N17 [JUGE] 1120720 1120645 - Val TAC [ENA] ¡û
>W1511432008 JUGF01000001 Betaproteobacteria Methylotenera versatilis 7 [JUGF] 750555 750480 - Val TAC [ENA] ¡û
>W1511432024 JUGF01000002 Betaproteobacteria Methylotenera versatilis 7 [JUGF] 1219377 1219452 + Val TAC [ENA] ¡û
>W1511433385 JUHE01000001 Betaproteobacteria Methylophilus sp. Q8 [JUHE] 584633 584708 + Val TAC [ENA] ¡û
>W1511433403 JUHE01000001 Betaproteobacteria Methylophilus sp. Q8 [JUHE] 2589147 2589072 - Val TAC [ENA] ¡û
>W1511433541 JUHH01000001 Betaproteobacteria Methylotenera sp. G11 [JUHH] 2279363 2279438 + Val TAC [ENA] ¡û
>W1511433559 JUHH01000001 Betaproteobacteria Methylotenera sp. G11 [JUHH] 711975 711900 - Val TAC [ENA] ¡û
>W1511517002 JXWN01000099 Betaproteobacteria Comamonas aquatica CJG [JXWN] 5001 4926 - Val TAC [ENA] ¡û
>W1511517003 JXWN01000099 Betaproteobacteria Comamonas aquatica CJG [JXWN] 4866 4791 - Val TAC [ENA] ¡û
>C161002866 CP016603 Betaproteobacteria Comamonas aquatica CJG [CP016603] 2732796 2732721 - Val TAC - ¡û
>C161002867 CP016603 Betaproteobacteria Comamonas aquatica CJG [CP016603] 2732661 2732586 - Val TAC - ¡û
>C161107886 LN906597 Betaproteobacteria Candidatus Ichthyocystis hellenicum [LN906597] 850975 851050 + Val TAC - ¡û
>W1610062749 BCNT01000001 Betaproteobacteria Comamonas terrae [BCNT] 576875 576800 - Val TAC [ENA] ¡û
>W1610077632 BCZP01000011 Betaproteobacteria Delftia acidovorans NBRC 14950 [BCZP] 8892 8817 - Val TAC [ENA] ¡û
>C131000333 AP012304 Betaproteobacteria Azoarcus sp. KH32C [AP012304] 3296178 3296103 - Val TAC [Ensembl] ¡û
>W1610459381 FKIH01000001 Betaproteobacteria Candidatus Ichthyocystis sparus 2013Ark19i [FKIH] 32997 33072 + Val TAC [ENA] ¡û
>W1610459449 FKII01000079 Betaproteobacteria Candidatus Ichthyocystis sparus 2013Ark19i [FKII] 32997 33072 + Val TAC [ENA] ¡û
>W1610459471 FKIJ01000012 Betaproteobacteria Candidatus Ichthyocystis sparus 2013Ark19i [FKIJ] 20851 20926 + Val TAC [ENA] ¡û
>W1610459500 FKIK01000006 Betaproteobacteria Candidatus Ichthyocystis sparus 2013Ark19i [FKIK] 32925 33000 + Val TAC [ENA] ¡û
>W1610459541 FKIL01000005 Betaproteobacteria Candidatus Ichthyocystis sparus 2013Ark19i [FKIL] 15440 15365 - Val TAC [ENA] ¡û
>W1610459564 FKIM01000001 Betaproteobacteria Candidatus Ichthyocystis sparus 2013Ark19i [FKIM] 22197 22122 - Val TAC [ENA] ¡û
>W1610506943 FLSL01000021 Betaproteobacteria Candidatus Ichthyocystis hellenicum 2013Arg42i [FLSL] 184 109 - Val TAC [ENA] ¡û
>W1610506958 FLSL01000081 Betaproteobacteria Candidatus Ichthyocystis hellenicum 2013Arg42i [FLSL] 20934 21009 + Val TAC [ENA] ¡û
>W1610506992 FLSL01000176 Betaproteobacteria Candidatus Ichthyocystis hellenicum 2013Arg42i [FLSL] 11652 11577 - Val TAC [ENA] ¡û
>W1610740421 LMQQ01000001 Betaproteobacteria Methylophilus sp. Leaf414 [LMQQ] 66659 66584 - Val TAC [ENA] ¡û
>W1610740443 LMQQ01000006 Betaproteobacteria Methylophilus sp. Leaf414 [LMQQ] 23699 23624 - Val TAC [ENA] ¡û
>W1610740495 LMQS01000001 Betaproteobacteria Methylophilus sp. Leaf416 [LMQS] 973130 973205 + Val TAC [ENA] ¡û
>W1610740505 LMQS01000001 Betaproteobacteria Methylophilus sp. Leaf416 [LMQS] 66618 66543 - Val TAC [ENA] ¡û
>W1610740722 LMQX01000001 Betaproteobacteria Methylophilus sp. Leaf459 [LMQX] 972845 972920 + Val TAC [ENA] ¡û
>W1610740732 LMQX01000001 Betaproteobacteria Methylophilus sp. Leaf459 [LMQX] 66023 65948 - Val TAC [ENA] ¡û
>W1610753557 LNEP01000001 Betaproteobacteria Betaproteobacteria bacterium Ga0077540 [LNEP] 370284 370359 + Val TAC [ENA] ¡û
>W1610753582 LNEP01000015 Betaproteobacteria Betaproteobacteria bacterium Ga0077540 [LNEP] 22817 22742 - Val TAC [ENA] ¡û
>W1710060225 BCNT01000001 Betaproteobacteria Comamonas terrae [BCNT] 576875 576800 - Val TAC [ENA] ¡û
>W1710075270 BCZP01000011 Betaproteobacteria Delftia acidovorans NBRC 14950 [BCZP] 8892 8817 - Val TAC [ENA] ¡û
>W1710459009 FKIH01000001 Betaproteobacteria Candidatus Ichthyocystis sparus 2013Ark19i [FKIH] 32997 33072 + Val TAC [ENA] ¡û
>W1710459077 FKII01000079 Betaproteobacteria Candidatus Ichthyocystis sparus 2013Ark19i [FKII] 32997 33072 + Val TAC [ENA] ¡û
>W1710459099 FKIJ01000012 Betaproteobacteria Candidatus Ichthyocystis sparus 2013Ark19i [FKIJ] 20851 20926 + Val TAC [ENA] ¡û
>W1710459128 FKIK01000006 Betaproteobacteria Candidatus Ichthyocystis sparus 2013Ark19i [FKIK] 32925 33000 + Val TAC [ENA] ¡û
>W1710459169 FKIL01000005 Betaproteobacteria Candidatus Ichthyocystis sparus 2013Ark19i [FKIL] 15440 15365 - Val TAC [ENA] ¡û
>W1710459192 FKIM01000001 Betaproteobacteria Candidatus Ichthyocystis sparus 2013Ark19i [FKIM] 22197 22122 - Val TAC [ENA] ¡û
>W1710499161 FLSL01000021 Betaproteobacteria Candidatus Ichthyocystis hellenicum 2013Arg42i [FLSL] 184 109 - Val TAC [ENA] ¡û
>W1710499176 FLSL01000081 Betaproteobacteria Candidatus Ichthyocystis hellenicum 2013Arg42i [FLSL] 20934 21009 + Val TAC [ENA] ¡û
>W1710499210 FLSL01000176 Betaproteobacteria Candidatus Ichthyocystis hellenicum 2013Arg42i [FLSL] 11652 11577 - Val TAC [ENA] ¡û
>W1710520785 FNFX01000002 Betaproteobacteria Methylophilus rhizosphaerae [FNFX] 50099 50024 - Val TAC [ENA] ¡û
>W1710520798 FNFX01000005 Betaproteobacteria Methylophilus rhizosphaerae [FNFX] 234862 234937 + Val TAC [ENA] ¡û
>W1710530901 FNPE01000015 Betaproteobacteria Delftia lacustris [FNPE] 162589 162664 + Val TAC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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