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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.257580 (213 seq.)
>W1710872686
LMME01000009
Alphaproteobacteria
Methylobacterium sp. Leaf85 [LMME]
52898
52973
+
Lys
CTT
[ENA]
¡û
>W1710872795
LMMG01000041
Alphaproteobacteria
Methylobacterium sp. Leaf86 [LMMG]
505347
505422
+
Lys
CTT
[ENA]
¡û
>W1710872871
LMMI01000012
Alphaproteobacteria
Methylobacterium sp. Leaf87 [LMMI]
276859
276934
+
Lys
CTT
[ENA]
¡û
>W1710872981
LMMK01000051
Alphaproteobacteria
Methylobacterium sp. Leaf88 [LMMK]
73589
73664
+
Lys
CTT
[ENA]
¡û
>W1710872993
LMML01000008
Alphaproteobacteria
Methylobacterium sp. Leaf89 [LMML]
4385
4310
-
Lys
CTT
[ENA]
¡û
>W1710873168
LMMP01000001
Alphaproteobacteria
Methylobacterium sp. Leaf91 [LMMP]
326307
326232
-
Lys
CTT
[ENA]
¡û
>W1710873342
LMMS01000001
Alphaproteobacteria
Methylobacterium sp. Leaf93 [LMMS]
543581
543506
-
Lys
CTT
[ENA]
¡û
>W1710873443
LMMU01000001
Alphaproteobacteria
Methylobacterium sp. Leaf99 [LMMU]
1083639
1083564
-
Lys
CTT
[ENA]
¡û
>W1710873528
LMMW01000001
Alphaproteobacteria
Methylobacterium sp. Leaf100 [LMMW]
395929
395854
-
Lys
CTT
[ENA]
¡û
>W1710873582
LMMX01000001
Alphaproteobacteria
Methylobacterium sp. Leaf102 [LMMX]
395631
395556
-
Lys
CTT
[ENA]
¡û
>W1710873714
LMMZ01000040
Alphaproteobacteria
Methylobacterium sp. Leaf104 [LMMZ]
181202
181277
+
Lys
CTT
[ENA]
¡û
>W1710873812
LMNB01000034
Alphaproteobacteria
Methylobacterium sp. Leaf106 [LMNB]
100879
100954
+
Lys
CTT
[ENA]
¡û
>W1710873882
LMND01000011
Alphaproteobacteria
Methylobacterium sp. Leaf108 [LMND]
42162
42237
+
Lys
CTT
[ENA]
¡û
>W1710873948
LMNE01000073
Alphaproteobacteria
Methylobacterium sp. Leaf111 [LMNE]
74038
74113
+
Lys
CTT
[ENA]
¡û
>W1710873996
LMNG01000001
Alphaproteobacteria
Methylobacterium sp. Leaf112 [LMNG]
415820
415895
+
Lys
CTT
[ENA]
¡û
>W1710874163
LMNJ01000022
Alphaproteobacteria
Methylobacterium sp. Leaf113 [LMNJ]
2259
2184
-
Lys
CTT
[ENA]
¡û
>W1710874267
LMNL01000034
Alphaproteobacteria
Methylobacterium sp. Leaf117 [LMNL]
136974
136899
-
Lys
CTT
[ENA]
¡û
>W1710874677
LMNU01000046
Alphaproteobacteria
Methylobacterium sp. Leaf125 [LMNU]
563
488
-
Lys
CTT
[ENA]
¡û
>W1710877780
LMQK01000002
Alphaproteobacteria
Methylobacterium sp. Leaf399 [LMQK]
41875
41950
+
Lys
CTT
[ENA]
¡û
>W1710878522
LMRA01000007
Alphaproteobacteria
Methylobacterium sp. Leaf465 [LMRA]
217432
217507
+
Lys
CTT
[ENA]
¡û
>W1710878618
LMRC01000011
Alphaproteobacteria
Methylobacterium sp. Leaf466 [LMRC]
42295
42370
+
Lys
CTT
[ENA]
¡û
>W1710878697
LMRE01000001
Alphaproteobacteria
Methylobacterium sp. Leaf469 [LMRE]
357385
357310
-
Lys
CTT
[ENA]
¡û
>W1710879182
LMRM01000008
Alphaproteobacteria
Methylobacterium sp. Leaf94 [LMRM]
132869
132944
+
Lys
CTT
[ENA]
¡û
>W1711166990
LVVY01000100
Alphaproteobacteria
Devosia elaeis S37 [LVVY]
4517
4442
-
Lys
CTT
[ENA]
¡û
>W131180129
ARMX01000024
Alphaproteobacteria
Novispirillum itersonii subsp. itersonii ATCC 12639 [ARMX]
77001
77076
+
Lys
CTT
[ENA]
¡û
>W131180130
ARMX01000024
Alphaproteobacteria
Novispirillum itersonii subsp. itersonii ATCC 12639 [ARMX]
121193
121268
+
Lys
CTT
[ENA]
¡û
>W1711188770
LWQT01000010
Alphaproteobacteria
Paramagnetospirillum marisnigri [LWQT]
5218
5143
-
Lys
CTT
[ENA]
¡û
>W131223645
AUCF01000013
Alphaproteobacteria
Azospirillum halopraeferens DSM 3675 [AUCF]
156285
156210
-
Lys
CTT
[ENA]
¡û
>W131223660
AUCF01000027
Alphaproteobacteria
Azospirillum halopraeferens DSM 3675 [AUCF]
50992
51067
+
Lys
CTT
[ENA]
¡û
>W1711385862
MEET01000005
Alphaproteobacteria
Pelagibacterium sp. SCN 63-126 [MEET]
7805
7880
+
Lys
CTT
[ENA]
¡û
>W1711385943
MEEU01000029
Alphaproteobacteria
Pelagibacterium sp. SCN 63-23 [MEEU]
51004
50929
-
Lys
CTT
[ENA]
¡û
>W1711385954
MEEU01000049
Alphaproteobacteria
Pelagibacterium sp. SCN 63-23 [MEEU]
18326
18401
+
Lys
CTT
[ENA]
¡û
>W1711385979
MEEV01000002
Alphaproteobacteria
Pelagibacterium sp. SCN 64-44 [MEEV]
199037
199112
+
Lys
CTT
[ENA]
¡û
>W1711386016
MEEV01000025
Alphaproteobacteria
Pelagibacterium sp. SCN 64-44 [MEEV]
168183
168258
+
Lys
CTT
[ENA]
¡û
>W1711387089
MEGG01000030
Alphaproteobacteria
Pelagibacterium sp. SCN 63-17 [MEGG]
89604
89679
+
Lys
CTT
[ENA]
¡û
>W1711504826
MKUY01000003
Alphaproteobacteria
Devosia sp. 63-57 [MKUY]
604076
604001
-
Lys
CTT
[ENA]
¡û
>C171115922
CP021112
Alphaproteobacteria
Pseudorhodoplanes sinuspersici RIPI110 [CP021112]
3067663
3067738
+
Lys
CTT
-
¡û
>W131159759
AQVT01000001
Alphaproteobacteria
Methylobacterium sp. 88A [AQVT]
4369652
4369577
-
Lys
CTT
[ENA]
¡û
>W131166766
ARCS01000002
Alphaproteobacteria
Methylobacterium sp. 77 [ARCS]
3433014
3433089
+
Lys
CTT
[ENA]
¡û
>WENV180261936
OBEQ011340838
[OBEQ] groundwater metagenome; groundwater
6
81
+
Lys
CTT
[ENA]
¡û
>W141082079
ATSX01000002
Alphaproteobacteria
Commensalibacter papalotli (ex Servin-Garciduenas et al. 2014) MX01 [ATSX]
160006
159931
-
Lys
CTT
[ENA]
¡û
>W141226112
BAJU01000011
Alphaproteobacteria
Acetobacter okinawensis JCM 25146 [BAJU]
25105
25180
+
Lys
CTT
[ENA]
¡û
>W141277741
JAEV01000001
Alphaproteobacteria
Methylobacterium sp. 10 [JAEV]
867164
867089
-
Lys
CTT
[ENA]
¡û
>WENV183727111
PJTO01005274
[PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment
829
754
-
Lys
CTT
[ENA]
¡û
>WENV183728542
PJTQ01000121
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
36880
36955
+
Lys
CTT
[ENA]
¡û
>WENV183729523
PJTQ01059306
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
204
279
+
Lys
CTT
[ENA]
¡û
>WENV183729907
PJTR01000172
[PJTR] soil metagenome; Soil (2) enriched on wood chips: beechwood xylan treatment
73929
73854
-
Lys
CTT
[ENA]
¡û
>WENV183731460
PJTT01000005
[PJTT] soil metagenome; Soil (2) enriched on wood chips
186616
186541
-
Lys
CTT
[ENA]
¡û
>WENV183732522
PJTX01001453
[PJTX] soil metagenome; Soil enriched (2) on filter paper: beechwood xylan treatment
691
616
-
Lys
CTT
[ENA]
¡û
>WENV183734156
PJTZ01000112
[PJTZ] soil metagenome; Soil enriched (2) on filter paper
54291
54216
-
Lys
CTT
[ENA]
¡û
>WENV183736834
PJUD01000051
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
114564
114639
+
Lys
CTT
[ENA]
¡û
>WENV183737366
PJUD01004915
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
685
760
+
Lys
CTT
[ENA]
¡û
>WENV183739734
PJUF01000004
[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips
572672
572747
+
Lys
CTT
[ENA]
¡û
>WENV183740047
PJUF01000196
[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips
50433
50508
+
Lys
CTT
[ENA]
¡û
>WENV183743629
PJUJ01012664
[PJUJ] feces metagenome; Chicken feces enriched on filter paper: beechwood xylan treatment
550
475
-
Lys
CTT
[ENA]
¡û
>WENV183745044
PJUL01001590
[PJUL] feces metagenome; Chicken feces enriched on filter paper
3801
3876
+
Lys
CTT
[ENA]
¡û
>WENV183745118
PJUL01002581
[PJUL] feces metagenome; Chicken feces enriched on filter paper
3896
3821
-
Lys
CTT
[ENA]
¡û
>WENV170578006
FSSH01005656
[FSSH] freshwater metagenome; drinking water
3824
3749
-
Lys
CTT
[ENA]
¡û
>C181139129
CP026747
Alphaproteobacteria
Devosia sp. I507 [CP026747]
3090592
3090667
+
Lys
CTT
-
¡û
>C181179047
CP029479
Alphaproteobacteria
Phenylobacterium parvum HYN0004 [CP029479]
1158181
1158106
-
Lys
CTT
-
¡û
>C191071860
CP030126
Alphaproteobacteria
Indioceanicola profundi SCSIO 08040 [CP030126]
2094349
2094274
-
Lys
CTT
-
¡û
>C191071861
CP030126
Alphaproteobacteria
Indioceanicola profundi SCSIO 08040 [CP030126]
2094243
2094168
-
Lys
CTT
-
¡û
>W141561196
JHYG01000007
Alphaproteobacteria
Acidocella facilis ATCC 35904 [JHYG]
21104
21179
+
Lys
CTT
[ENA]
¡û
>W1910442995
FWFR01000003
Alphaproteobacteria
Oceanibacterium hippocampi CECT 7691 [FWFR]
386710
386635
-
Lys
CTT
[ENA]
¡û
>W1910871859
NCXK01000004
Alphaproteobacteria
Acetobacter fabarum KR [NCXK]
90688
90613
-
Lys
CTT
[ENA]
¡û
>W1910872355
NDFO01000014
Alphaproteobacteria
Acetobacter syzygii KR-1 [NDFO]
78587
78662
+
Lys
CTT
[ENA]
¡û
>W1910872400
NDFP01000013
Alphaproteobacteria
Acetobacter syzygii KR-2 [NDFP]
79111
79186
+
Lys
CTT
[ENA]
¡û
>W1911148425
NPEV01000046
Alphaproteobacteria
Rhodobium orientis DSM 11290 [NPEV]
6572
6647
+
Lys
CTT
[ENA]
¡û
>W1911497389
OCNJ01000005
Alphaproteobacteria
Caenispirillum bisanense USBA 140 [OCNJ]
218427
218502
+
Lys
CTT
[ENA]
¡û
>W1810053998
PDEU01000006
Alphaproteobacteria
Acetobacter fabarum OG2 [PDEU]
82409
82484
+
Lys
CTT
[ENA]
¡û
>W1810057212
PDHT01000024
Alphaproteobacteria
Methylobacterium sp. V23 [PDHT]
33016
33091
+
Lys
CTT
[ENA]
¡û
>W1810101808
PGTO01000010
Alphaproteobacteria
Paramagnetospirillum kuznetsovii LBB-42 [PGTO]
86169
86094
-
Lys
CTT
[ENA]
¡û
>W1810426226
PYVZ01000019
Alphaproteobacteria
Devosia indica IO390501 [PYVZ]
12081
12006
-
Lys
CTT
[ENA]
¡û
>W1810487208
QAYK01000004
Alphaproteobacteria
Methylobacterium sp. GV104 [QAYK]
249638
249563
-
Lys
CTT
[ENA]
¡û
>W1810489520
QBBV01000004
Alphaproteobacteria
Acuticoccus kandeliae J103 [QBBV]
376439
376364
-
Lys
CTT
[ENA]
¡û
>W1810576893
QENV01000002
Alphaproteobacteria
Devosia sp. PTEAB7WZ [QENV]
200772
200847
+
Lys
CTT
[ENA]
¡û
>W1810672704
QJTP01000004
Alphaproteobacteria
Methylobacterium sp. GV094 [QJTP]
249638
249563
-
Lys
CTT
[ENA]
¡û
>SRA1015450
SRR023846.63017
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
141
66
-
Lys
CTT
[SRA]
>SRA1015769
SRR023846.192203
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
122
47
-
Lys
CTT
[SRA]
>SRA1016185
SRR023846.387284
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
107
32
-
Lys
CTT
[SRA]
>SRA1016245
SRR023846.416888
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
123
48
-
Lys
CTT
[SRA]
>SRA1016361
SRR023846.465912
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
35
110
+
Lys
CTT
[SRA]
>W2010100835
BJVT01000007
Alphaproteobacteria
Acetobacter syzygii NBRC 16604 [BJVT]
78936
79011
+
Lys
CTT
[ENA]
¡û
>W2010104840
BJYZ01000006
Alphaproteobacteria
Skermanella aerolata NBRC 106429 [BJYZ]
411444
411369
-
Lys
CTT
[ENA]
¡û
>W2010325988
CACVCH010000051
Alphaproteobacteria
Magnetospirillum sp. SS-4 [CACVCH]
1507
1432
-
Lys
CTT
[ENA]
¡û
>W2010406359
FWFR01000003
Alphaproteobacteria
Oceanibacterium hippocampi CECT 7691 [FWFR]
386710
386635
-
Lys
CTT
[ENA]
¡û
>W2010435380
JAAALA010000012
Alphaproteobacteria
Caulobacter sp. SLTY [JAAALA]
41278
41203
-
Lys
CTT
[ENA]
¡û
>W2010472582
JAAHTB010000022
Alphaproteobacteria
Methylobacterium sp. BTF04 [JAAHTB]
42052
42127
+
Lys
CTT
[ENA]
¡û
>W2010489490
JAAIYP010000037
Alphaproteobacteria
Magnetospirillum aberrantis SpK [JAAIYP]
70479
70554
+
Lys
CTT
[ENA]
¡û
>W2010574377
JAAVSS010000010
Alphaproteobacteria
Haematospirillum jordaniae H6179 [JAAVSS]
3267
3192
-
Lys
CTT
[ENA]
¡û
>W2010574417
JAAVST010000002
Alphaproteobacteria
Haematospirillum jordaniae H6172 [JAAVST]
276882
276957
+
Lys
CTT
[ENA]
¡û
>W2010574472
JAAVSU010000002
Alphaproteobacteria
Haematospirillum jordaniae H6167 [JAAVSU]
152352
152277
-
Lys
CTT
[ENA]
¡û
>W2010574520
JAAVSV010000002
Alphaproteobacteria
Haematospirillum jordaniae H5569 [JAAVSV]
109959
109884
-
Lys
CTT
[ENA]
¡û
>W2010574564
JAAVSW010000003
Alphaproteobacteria
Haematospirillum sp. H4890 [JAAVSW]
153522
153447
-
Lys
CTT
[ENA]
¡û
>W2010574613
JAAVSX010000002
Alphaproteobacteria
Haematospirillum jordaniae H4555 [JAAVSX]
277387
277462
+
Lys
CTT
[ENA]
¡û
>W2010574660
JAAVSY010000002
Alphaproteobacteria
Haematospirillum sp. H4485 [JAAVSY]
153522
153447
-
Lys
CTT
[ENA]
¡û
>W2010574704
JAAVSZ010000002
Alphaproteobacteria
Haematospirillum jordaniae H4011 [JAAVSZ]
155876
155801
-
Lys
CTT
[ENA]
¡û
>W2010574760
JAAVTA010000002
Alphaproteobacteria
Haematospirillum sp. H1815 [JAAVTA]
154572
154497
-
Lys
CTT
[ENA]
¡û
>W2010574810
JAAVTB010000002
Alphaproteobacteria
Haematospirillum jordaniae 18-209 [JAAVTB]
276880
276955
+
Lys
CTT
[ENA]
¡û
>W2010574863
JAAVTC010000002
Alphaproteobacteria
Haematospirillum jordaniae 16-489 [JAAVTC]
105167
105092
-
Lys
CTT
[ENA]
¡û
>W2010574913
JAAVTD010000002
Alphaproteobacteria
Haematospirillum jordaniae 16-449 [JAAVTD]
105107
105032
-
Lys
CTT
[ENA]
¡û
>W2010574963
JAAVTE010000002
Alphaproteobacteria
Haematospirillum jordaniae 16-385 [JAAVTE]
109825
109750
-
Lys
CTT
[ENA]
¡û
>W2010575007
JAAVTF010000002
Alphaproteobacteria
Haematospirillum sp. 15-248 [JAAVTF]
194076
194151
+
Lys
CTT
[ENA]
¡û
>W2010703520
JACHIE010000009
Alphaproteobacteria
Acetobacter lovaniensis DSM 4491 [JACHIE]
46154
46079
-
Lys
CTT
[ENA]
¡û
>W2010726317
JACIEW010000002
Alphaproteobacteria
Devosia subaequoris DSM 23447 [JACIEW]
243199
243124
-
Lys
CTT
[ENA]
¡û
>W2010731246
JACIIX010000002
Alphaproteobacteria
Novispirillum itersonii DSM 11590 [JACIIX]
60748
60823
+
Lys
CTT
[ENA]
¡û
>W2010731247
JACIIX010000002
Alphaproteobacteria
Novispirillum itersonii DSM 11590 [JACIIX]
95180
95255
+
Lys
CTT
[ENA]
¡û
>W2010940589
NCXK01000004
Alphaproteobacteria
Acetobacter fabarum KR [NCXK]
90688
90613
-
Lys
CTT
[ENA]
¡û
>W2010941058
NDFO01000014
Alphaproteobacteria
Acetobacter syzygii KR-1 [NDFO]
78587
78662
+
Lys
CTT
[ENA]
¡û
>W2010941103
NDFP01000013
Alphaproteobacteria
Acetobacter syzygii KR-2 [NDFP]
79111
79186
+
Lys
CTT
[ENA]
¡û
>W2011355096
RAQD01000005
Alphaproteobacteria
Pseudorhodoplanes sinuspersici CECT 8374 [RAQD]
400378
400303
-
Lys
CTT
[ENA]
¡û
>W2011513120
RZNJ01000002
Alphaproteobacteria
Arsenicitalea aurantiaca 42-50 [RZNJ]
854113
854038
-
Lys
CTT
[ENA]
¡û
>W2011958272
UZWD01000036
Alphaproteobacteria
Devosia sp. M6-77 [UZWD]
51507
51582
+
Lys
CTT
[ENA]
¡û
>W2011976660
VCMV01000014
Alphaproteobacteria
Microvirga sp. CDVBN77 [VCMV]
80028
79953
-
Lys
CTT
[ENA]
¡û
>W2012126894
VRUZ01000068
Alphaproteobacteria
Methylobacterium sp. WL69 [VRUZ]
9968
9893
-
Lys
CTT
[ENA]
¡û
>W2012127018
VRVC01000026
Alphaproteobacteria
Methylobacterium sp. WL19 [VRVC]
2921
2996
+
Lys
CTT
[ENA]
¡û
>W2012406893
WOTC01000009
Alphaproteobacteria
Acetobacter lovaniensis LMG 1617 [WOTC]
46170
46095
-
Lys
CTT
[ENA]
¡û
>W2012406924
WOTD01000005
Alphaproteobacteria
Acetobacter lambici LMG 27439 [WOTD]
64898
64973
+
Lys
CTT
[ENA]
¡û
>W2012406991
WOTE01000005
Alphaproteobacteria
Acetobacter ghanensis LMG 23848 [WOTE]
102120
102045
-
Lys
CTT
[ENA]
¡û
>W2012407074
WOTG01000005
Alphaproteobacteria
Acetobacter fabarum LMG 24244 [WOTG]
81330
81405
+
Lys
CTT
[ENA]
¡û
>W2012425659
WQRF01000001
Alphaproteobacteria
Devosia marina L53-10-65 [WQRF]
1325571
1325496
-
Lys
CTT
[ENA]
¡û
>W2110063515
BOPV01000001
Alphaproteobacteria
Rhodospirillales bacterium TMPK1 [BOPV]
2511000
2511075
+
Lys
CTT
[ENA]
¡û
>W2110202914
JACDXV010000001
Alphaproteobacteria
Devosia sp. CC-YST696 [JACDXV]
765819
765744
-
Lys
CTT
[ENA]
¡û
>W2110287215
JACYFU010000001
Alphaproteobacteria
Devosia sp. PTR5 [JACYFU]
398637
398712
+
Lys
CTT
[ENA]
¡û
>W2110325616
JADIJP010000004
Alphaproteobacteria
Methylobacterium sp. SD274 [JADIJP]
20813
20738
-
Lys
CTT
[ENA]
¡û
>W2110423837
JAEKMH010000001
Alphaproteobacteria
Devosia sediminis MSA67 [JAEKMH]
753326
753401
+
Lys
CTT
[ENA]
¡û
>W2110427756
JAEMEB010000003
Alphaproteobacteria
Devosia sp. MC521 [JAEMEB]
104582
104507
-
Lys
CTT
[ENA]
¡û
>W2110427757
JAEMEB010000003
Alphaproteobacteria
Devosia sp. MC521 [JAEMEB]
104452
104377
-
Lys
CTT
[ENA]
¡û
>W2110427758
JAEMEB010000003
Alphaproteobacteria
Devosia sp. MC521 [JAEMEB]
104317
104242
-
Lys
CTT
[ENA]
¡û
>W2110427759
JAEMEB010000003
Alphaproteobacteria
Devosia sp. MC521 [JAEMEB]
104182
104107
-
Lys
CTT
[ENA]
¡û
>W2110428942
JAEMNZ010000002
Alphaproteobacteria
Devosia sp. MC532 [JAEMNZ]
248047
248122
+
Lys
CTT
[ENA]
¡û
>W2110428943
JAEMNZ010000002
Alphaproteobacteria
Devosia sp. MC532 [JAEMNZ]
248177
248252
+
Lys
CTT
[ENA]
¡û
>W2110428944
JAEMNZ010000002
Alphaproteobacteria
Devosia sp. MC532 [JAEMNZ]
248312
248387
+
Lys
CTT
[ENA]
¡û
>W2110428945
JAEMNZ010000002
Alphaproteobacteria
Devosia sp. MC532 [JAEMNZ]
248447
248522
+
Lys
CTT
[ENA]
¡û
>W2110431640
JAENGO010000001
Alphaproteobacteria
Devosia sp. WQ 349K1 [JAENGO]
884491
884416
-
Lys
CTT
[ENA]
¡û
>W2110431641
JAENGO010000001
Alphaproteobacteria
Devosia sp. WQ 349K1 [JAENGO]
884361
884286
-
Lys
CTT
[ENA]
¡û
>W2110431642
JAENGO010000001
Alphaproteobacteria
Devosia sp. WQ 349K1 [JAENGO]
884226
884151
-
Lys
CTT
[ENA]
¡û
>W2110431643
JAENGO010000001
Alphaproteobacteria
Devosia sp. WQ 349K1 [JAENGO]
884091
884016
-
Lys
CTT
[ENA]
¡û
>W2110442584
JAERKS010000008
Alphaproteobacteria
Acetobacter okinawensis Dm-38 [JAERKS]
43417
43342
-
Lys
CTT
[ENA]
¡û
>W2110442648
JAERKT010000087
Alphaproteobacteria
Acetobacter okinawensis Dm-55 [JAERKT]
6675
6750
+
Lys
CTT
[ENA]
¡û
>W2110453987
JAETGP010000008
Alphaproteobacteria
Skermanella mucosa KEMB 2255-438 [JAETGP]
194359
194434
+
Lys
CTT
[ENA]
¡û
>W2110455660
JAEUWT010000009
Alphaproteobacteria
Skermanella rosea KEMB 2255-458 [JAEUWT]
184840
184915
+
Lys
CTT
[ENA]
¡û
>C211239234
CP067420
Alphaproteobacteria
Skermanella sp. TT6 [CP067420]
815037
814962
-
Lys
CTT
-
¡û
>C211381463
CP080590
Alphaproteobacteria
Devosia sp. SCS-3 [CP080590]
2439936
2439861
-
Lys
CTT
-
¡û
>C231221439
CP086106
Alphaproteobacteria
Skermanella mucosa KEMB 2255-438 [CP086106]
853958
853883
-
Lys
CTT
-
¡û
>C231221497
CP086111
Alphaproteobacteria
Skermanella rosea KEMB 2255-458 [CP086111]
788204
788129
-
Lys
CTT
-
¡û
>W2110752768
NKUG01000041
Alphaproteobacteria
Methylobacterium bullatum LMG 24788 [NKUG]
138
63
-
Lys
CTT
[ENA]
¡û
>C231483162
CP104002
Alphaproteobacteria
Devosia sp. SD17-2 [CP104002]
1701020
1701095
+
Lys
CTT
-
¡û
>C231483163
CP104002
Alphaproteobacteria
Devosia sp. SD17-2 [CP104002]
1701296
1701371
+
Lys
CTT
-
¡û
>C231483356
CP104007
Alphaproteobacteria
Devosia sp. FJ2-5-3 [CP104007]
1639242
1639317
+
Lys
CTT
-
¡û
>C231483357
CP104007
Alphaproteobacteria
Devosia sp. FJ2-5-3 [CP104007]
1639516
1639591
+
Lys
CTT
-
¡û
>C231516217
CP107532
Alphaproteobacteria
Methylobacterium sp. FF17 [CP107532]
2399034
2399109
+
Lys
CTT
-
¡û
>W2110775311
VMOA01000002
Alphaproteobacteria
Methylobacterium sp. W2 [VMOA]
182378
182303
-
Lys
CTT
[ENA]
¡û
>C241034292
CP030265
Alphaproteobacteria
Skermanella pratensis W17 [CP030265]
771889
771814
-
Lys
CTT
-
¡û
>C241180066
CP059902
Alphaproteobacteria
Devosia sp. MC521 [CP059902]
2406131
2406056
-
Lys
CTT
-
¡û
>C241180067
CP059902
Alphaproteobacteria
Devosia sp. MC521 [CP059902]
2406001
2405926
-
Lys
CTT
-
¡û
>C241180068
CP059902
Alphaproteobacteria
Devosia sp. MC521 [CP059902]
2405866
2405791
-
Lys
CTT
-
¡û
>C241180069
CP059902
Alphaproteobacteria
Devosia sp. MC521 [CP059902]
2405731
2405656
-
Lys
CTT
-
¡û
>C241269852
CP126539
Alphaproteobacteria
Devosia sp. RR2S18 [CP126539]
1512119
1512194
+
Lys
CTT
-
¡û
>C241276357
CP127251
Alphaproteobacteria
Devosia sp. YIM 151766 [CP127251]
1896013
1895938
-
Lys
CTT
-
¡û
>W2310007455
BAPB01000024
Alphaproteobacteria
Acetobacter fabarum DSM 19596 [BAPB]
20578
20653
+
Lys
CTT
[ENA]
¡û
>W2310007514
BAPC01000031
Alphaproteobacteria
Acetobacter ghanensis DSM 18895 [BAPC]
6643
6718
+
Lys
CTT
[ENA]
¡û
>W2310007567
BAPE01000008
Alphaproteobacteria
Acetobacter lovaniensis NRIC 0474 [BAPE]
64937
65012
+
Lys
CTT
[ENA]
¡û
>W2310007984
BAPO01000066
Alphaproteobacteria
Acetobacter syzygii NRIC 0483 [BAPO]
78817
78892
+
Lys
CTT
[ENA]
¡û
>W2310012771
BPQD01000041
Alphaproteobacteria
Methylobacterium adhaesivum DSM 17169 [BPQD]
24218
24143
-
Lys
CTT
[ENA]
¡û
>W2310012856
BPQF01000031
Alphaproteobacteria
Methylobacterium bullatum DSM 21893 [BPQF]
32027
32102
+
Lys
CTT
[ENA]
¡û
>W2310013127
BPQL01000123
Alphaproteobacteria
Methylobacterium goesingense DSM 21331 [BPQL]
15226
15301
+
Lys
CTT
[ENA]
¡û
>W2310013300
BPQP01000019
Alphaproteobacteria
Methylobacterium iners DSM 19015 [BPQP]
46382
46457
+
Lys
CTT
[ENA]
¡û
>W2310013487
BPQT01000027
Alphaproteobacteria
Methylobacterium marchantiae DSM 21328 [BPQT]
3296
3221
-
Lys
CTT
[ENA]
¡û
>W2310024483
BSNS01000008
Alphaproteobacteria
Devosia nitrariae NBRC 112416 [BSNS]
57986
58061
+
Lys
CTT
[ENA]
¡û
>W1511541953
JZEX01000143
Alphaproteobacteria
Devosia geojensis BD-c194 [JZEX]
2925
3000
+
Lys
CTT
[ENA]
¡û
>W1511541974
JZEY01000054
Alphaproteobacteria
Devosia chinhatensis IPL18 [JZEY]
1872971
1872896
-
Lys
CTT
[ENA]
¡û
>W11179022
AGFR01000009
Alphaproteobacteria
Commensalibacter intestini A911 [AGFR]
294136
294211
+
Lys
CTT
[ENA]
¡û
>C161073353
CP014525
Alphaproteobacteria
Haematospirillum jordaniae H5569 [CP014525]
1271118
1271193
+
Lys
CTT
[Ensembl]
¡û
>C161105595
LN609302
Alphaproteobacteria
Acetobacter ghanensis LMG 23848T [LN609302]
404918
404843
-
Lys
CTT
[Ensembl]
¡û
>W1610026871
AVFK01000004
Alphaproteobacteria
Skermanella aerolata KACC 11604 [AVFK]
281531
281456
-
Lys
CTT
[ENA]
¡û
>W1610040937
BAMZ01000082
Alphaproteobacteria
Acetobacter syzygii 9H-2 [BAMZ]
78748
78823
+
Lys
CTT
[ENA]
¡û
>W1610735032
LMME01000009
Alphaproteobacteria
Methylobacterium sp. Leaf85 [LMME]
52898
52973
+
Lys
CTT
[ENA]
¡û
>W1610735141
LMMG01000041
Alphaproteobacteria
Methylobacterium sp. Leaf86 [LMMG]
505347
505422
+
Lys
CTT
[ENA]
¡û
>W1610735217
LMMI01000012
Alphaproteobacteria
Methylobacterium sp. Leaf87 [LMMI]
276859
276934
+
Lys
CTT
[ENA]
¡û
>W1610735327
LMMK01000051
Alphaproteobacteria
Methylobacterium sp. Leaf88 [LMMK]
73589
73664
+
Lys
CTT
[ENA]
¡û
>W1610735339
LMML01000008
Alphaproteobacteria
Methylobacterium sp. Leaf89 [LMML]
4385
4310
-
Lys
CTT
[ENA]
¡û
>W1610735514
LMMP01000001
Alphaproteobacteria
Methylobacterium sp. Leaf91 [LMMP]
326307
326232
-
Lys
CTT
[ENA]
¡û
>W1610735688
LMMS01000001
Alphaproteobacteria
Methylobacterium sp. Leaf93 [LMMS]
543581
543506
-
Lys
CTT
[ENA]
¡û
>W1610735789
LMMU01000001
Alphaproteobacteria
Methylobacterium sp. Leaf99 [LMMU]
1083639
1083564
-
Lys
CTT
[ENA]
¡û
>W1610735874
LMMW01000001
Alphaproteobacteria
Methylobacterium sp. Leaf100 [LMMW]
395929
395854
-
Lys
CTT
[ENA]
¡û
>W1610735928
LMMX01000001
Alphaproteobacteria
Methylobacterium sp. Leaf102 [LMMX]
395631
395556
-
Lys
CTT
[ENA]
¡û
>W1610736060
LMMZ01000040
Alphaproteobacteria
Methylobacterium sp. Leaf104 [LMMZ]
181202
181277
+
Lys
CTT
[ENA]
¡û
>W1610736158
LMNB01000034
Alphaproteobacteria
Methylobacterium sp. Leaf106 [LMNB]
100879
100954
+
Lys
CTT
[ENA]
¡û
>W1610736228
LMND01000011
Alphaproteobacteria
Methylobacterium sp. Leaf108 [LMND]
42162
42237
+
Lys
CTT
[ENA]
¡û
>W1610736294
LMNE01000073
Alphaproteobacteria
Methylobacterium sp. Leaf111 [LMNE]
74038
74113
+
Lys
CTT
[ENA]
¡û
>W1610736342
LMNG01000001
Alphaproteobacteria
Methylobacterium sp. Leaf112 [LMNG]
415820
415895
+
Lys
CTT
[ENA]
¡û
>W1610736509
LMNJ01000022
Alphaproteobacteria
Methylobacterium sp. Leaf113 [LMNJ]
2259
2184
-
Lys
CTT
[ENA]
¡û
>W1610736613
LMNL01000034
Alphaproteobacteria
Methylobacterium sp. Leaf117 [LMNL]
136974
136899
-
Lys
CTT
[ENA]
¡û
>W1610737023
LMNU01000046
Alphaproteobacteria
Methylobacterium sp. Leaf125 [LMNU]
563
488
-
Lys
CTT
[ENA]
¡û
>W1610740126
LMQK01000002
Alphaproteobacteria
Methylobacterium sp. Leaf399 [LMQK]
41875
41950
+
Lys
CTT
[ENA]
¡û
>W1610740868
LMRA01000007
Alphaproteobacteria
Methylobacterium sp. Leaf465 [LMRA]
217432
217507
+
Lys
CTT
[ENA]
¡û
>W1610740964
LMRC01000011
Alphaproteobacteria
Methylobacterium sp. Leaf466 [LMRC]
42295
42370
+
Lys
CTT
[ENA]
¡û
>W1610741043
LMRE01000001
Alphaproteobacteria
Methylobacterium sp. Leaf469 [LMRE]
357385
357310
-
Lys
CTT
[ENA]
¡û
>W1610741528
LMRM01000008
Alphaproteobacteria
Methylobacterium sp. Leaf94 [LMRM]
132869
132944
+
Lys
CTT
[ENA]
¡û
>W1610977530
LVVY01000100
Alphaproteobacteria
Devosia elaeis S37 [LVVY]
4517
4442
-
Lys
CTT
[ENA]
¡û
>W1610990889
LWQT01000010
Alphaproteobacteria
Paramagnetospirillum marisnigri [LWQT]
5218
5143
-
Lys
CTT
[ENA]
¡û
>WENV077705
AAFX01091226
Soil microbial communities from Minnesota Farm
674
749
+
Lys
CTT
[ENA]
>W1710023036
AVFK01000004
Alphaproteobacteria
Skermanella aerolata KACC 11604 [AVFK]
281531
281456
-
Lys
CTT
[ENA]
¡û
>W1710038135
BAMZ01000082
Alphaproteobacteria
Acetobacter syzygii 9H-2 [BAMZ]
78748
78823
+
Lys
CTT
[ENA]
¡û
>W1710516652
FNCS01000003
Alphaproteobacteria
Pelagibacterium luteolum [FNCS]
51278
51203
-
Lys
CTT
[ENA]
¡û
>W1710563173
FOPM01000006
Alphaproteobacteria
Methylobacterium gossipiicola [FOPM]
89815
89740
-
Lys
CTT
[ENA]
¡û
>W1710579476
FPCK01000001
Alphaproteobacteria
Devosia crocina [FPCK]
1139481
1139556
+
Lys
CTT
[ENA]
¡û
>W1710582164
FPKU01000001
Alphaproteobacteria
Devosia enhydra [FPKU]
1273358
1273283
-
Lys
CTT
[ENA]
¡û
>W1710609389
FXWK01000001
Alphaproteobacteria
Devosia lucknowensis [FXWK]
1562211
1562136
-
Lys
CTT
[ENA]
¡û
>W1710624592
JOPB01000005
Alphaproteobacteria
Commensalibacter intestini [JOPB]
281956
282031
+
Lys
CTT
[ENA]
¡û
>W1710624689
JOPD01000016
Alphaproteobacteria
Acetobacter sp. DsW_54 [JOPD]
19534
19609
+
Lys
CTT
[ENA]
¡û
>W1710624898
JOPJ01000050
Alphaproteobacteria
Acetobacter okinawensis [JOPJ]
96194
96269
+
Lys
CTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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