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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
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|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.258056 (243 seq.)
>W1710777296
LJBJ02000016
Actinomycetota
Rothia kristinae [LJBJ]
31543
31470
-
Glu
CTC
[ENA]
¡û
>W1710996375
LQBJ01000011
Actinomycetota
Kocuria palustris [LQBJ]
158969
158896
-
Glu
CTC
[ENA]
¡û
>W1710996376
LQBJ01000011
Actinomycetota
Kocuria palustris [LQBJ]
158772
158699
-
Glu
CTC
[ENA]
¡û
>W1711095365
LTGT01000013
Actinomycetota
Rothia sp. HMSC069C03 [LTGT]
137
64
-
Glu
CTC
[ENA]
¡û
>W1711095396
LTGT01000053
Actinomycetota
Rothia sp. HMSC069C03 [LTGT]
15713
15786
+
Glu
CTC
[ENA]
¡û
>W1711098418
LTJO01000011
Actinomycetota
Rothia sp. HMSC064D08 [LTJO]
1616
1689
+
Glu
CTC
[ENA]
¡û
>W1711098427
LTJO01000015
Actinomycetota
Rothia sp. HMSC064D08 [LTJO]
135952
135879
-
Glu
CTC
[ENA]
¡û
>W1711104717
LTQB01000029
Actinomycetota
Rothia sp. HMSC062F03 [LTQB]
50682
50609
-
Glu
CTC
[ENA]
¡û
>W1711104727
LTQB01000044
Actinomycetota
Rothia sp. HMSC062F03 [LTQB]
9216
9141
-
Glu
CTC
[ENA]
¡û
>W1711107922
LTTG01000028
Actinomycetota
Rothia sp. HMSC065D02 [LTTG]
58624
58697
+
Glu
CTC
[ENA]
¡û
>W1711107933
LTTG01000032
Actinomycetota
Rothia sp. HMSC065D02 [LTTG]
132572
132499
-
Glu
CTC
[ENA]
¡û
>W1711109161
LTUK01000012
Actinomycetota
Rothia sp. HMSC069C01 [LTUK]
132637
132564
-
Glu
CTC
[ENA]
¡û
>W1711110674
LTVT01000036
Actinomycetota
Rothia sp. HMSC071C12 [LTVT]
23361
23288
-
Glu
CTC
[ENA]
¡û
>W1711111129
LTWE01000011
Actinomycetota
Rothia sp. HMSC061E04 [LTWE]
1784
1709
-
Glu
CTC
[ENA]
¡û
>W1711111426
LTWL01000034
Actinomycetota
Rothia sp. HMSC068E02 [LTWL]
655
728
+
Glu
CTC
[ENA]
¡û
>W1711111436
LTWL01000042
Actinomycetota
Rothia sp. HMSC068E02 [LTWL]
9294
9221
-
Glu
CTC
[ENA]
¡û
>W1711178734
LWGZ01000878
Actinomycetota
Rothia kristinae [LWGZ]
248
175
-
Glu
CTC
[ENA]
¡û
>W1711589207
MODZ01000007
Actinomycetota
Rothia kristinae [MODZ]
142685
142612
-
Glu
CTC
[ENA]
¡û
>WENV180008449
FLSB01031661
[FLSB] metagenome; saliva
809
881
+
Glu
CTC
[ENA]
¡û
>WENV180121882
OASS01004546
[OASS] human gut metagenome; faeces
99
24
-
Glu
CTC
[ENA]
¡û
>WENV180474884
OBYT01000122
[OBYT] human gut metagenome; faeces
175
248
+
Glu
CTC
[ENA]
¡û
>WENV180696475
ODCT01005154
[ODCT] human metagenome; G_DNA_Buccal mucosa
307
380
+
Glu
CTC
[ENA]
¡û
>WENV180697472
ODDE01000673
[ODDE] human metagenome; G_DNA_Supragingival plaque
8543
8470
-
Glu
CTC
[ENA]
¡û
>WENV180698231
ODDE01101289
[ODDE] human metagenome; G_DNA_Supragingival plaque
82
9
-
Glu
CTC
[ENA]
¡û
>WENV180704595
ODEJ01000001
[ODEJ] human metagenome; G_DNA_Tongue dorsum
137346
137421
+
Glu
CTC
[ENA]
¡û
>WENV180704604
ODEJ01000001
[ODEJ] human metagenome; G_DNA_Tongue dorsum
678958
678885
-
Glu
CTC
[ENA]
¡û
>WENV180717461
ODGE01000008
[ODGE] human metagenome; G_DNA_Buccal mucosa
275750
275677
-
Glu
CTC
[ENA]
¡û
>WENV180717469
ODGE01000010
[ODGE] human metagenome; G_DNA_Buccal mucosa
230598
230523
-
Glu
CTC
[ENA]
¡û
>WENV180717795
ODGE01002745
[ODGE] human metagenome; G_DNA_Buccal mucosa
1750
1677
-
Glu
CTC
[ENA]
¡û
>WENV180717840
ODGE01004244
[ODGE] human metagenome; G_DNA_Buccal mucosa
2041
1968
-
Glu
CTC
[ENA]
¡û
>WENV180718967
ODGI01020653
[ODGI] human metagenome; G_DNA_Buccal mucosa
101
174
+
Glu
CTC
[ENA]
¡û
>WENV180733403
ODGZ01000019
[ODGZ] human metagenome; G_DNA_Supragingival plaque
13221
13294
+
Glu
CTC
[ENA]
¡û
>WENV180733428
ODGZ01000029
[ODGZ] human metagenome; G_DNA_Supragingival plaque
14656
14729
+
Glu
CTC
[ENA]
¡û
>WENV180734414
ODGZ01008197
[ODGZ] human metagenome; G_DNA_Supragingival plaque
3325
3252
-
Glu
CTC
[ENA]
¡û
>WENV180741052
ODHG01013470
[ODHG] human metagenome; G_DNA_Buccal mucosa
226
153
-
Glu
CTC
[ENA]
¡û
>WENV180746201
ODHM01016779
[ODHM] human metagenome; G_DNA_Buccal mucosa
595
670
+
Glu
CTC
[ENA]
¡û
>WENV180754983
ODHU01005894
[ODHU] human metagenome; G_DNA_Supragingival plaque
1054
981
-
Glu
CTC
[ENA]
¡û
>WENV180755374
ODHU01140532
[ODHU] human metagenome; G_DNA_Supragingival plaque
82
9
-
Glu
CTC
[ENA]
¡û
>WENV180757535
ODHW01000599
[ODHW] human metagenome; G_DNA_Tongue dorsum
17311
17236
-
Glu
CTC
[ENA]
¡û
>WENV180757750
ODHW01001636
[ODHW] human metagenome; G_DNA_Tongue dorsum
2906
2981
+
Glu
CTC
[ENA]
¡û
>WENV180763846
ODIA01006645
[ODIA] human metagenome; G_DNA_Tongue dorsum
3545
3472
-
Glu
CTC
[ENA]
¡û
>WENV180774509
ODIJ01028976
[ODIJ] human metagenome; G_DNA_Tongue dorsum
74
1
-
Glu
CTC
[ENA]
¡û
>WENV180774763
ODIJ01070041
[ODIJ] human metagenome; G_DNA_Tongue dorsum
201
274
+
Glu
CTC
[ENA]
¡û
>WENV180775528
ODIK01000935
[ODIK] human metagenome; G_DNA_Tongue dorsum
74
1
-
Glu
CTC
[ENA]
¡û
>WENV180775776
ODIK01004053
[ODIK] human metagenome; G_DNA_Tongue dorsum
83
10
-
Glu
CTC
[ENA]
¡û
>WENV180791582
ODIU01029899
[ODIU] human metagenome; G_DNA_Buccal mucosa
2
75
+
Glu
CTC
[ENA]
¡û
>WENV180800467
ODJD01000030
[ODJD] human metagenome; G_DNA_Supragingival plaque
74956
74883
-
Glu
CTC
[ENA]
¡û
>WENV180800780
ODJD01001019
[ODJD] human metagenome; G_DNA_Supragingival plaque
8066
7993
-
Glu
CTC
[ENA]
¡û
>WENV180805700
ODJH01000126
[ODJH] human metagenome; G_DNA_Tongue dorsum
45100
45027
-
Glu
CTC
[ENA]
¡û
>WENV180805875
ODJH01000406
[ODJH] human metagenome; G_DNA_Tongue dorsum
14454
14527
+
Glu
CTC
[ENA]
¡û
>WENV180821203
ODJS01001795
[ODJS] human metagenome; G_DNA_Tongue dorsum
5674
5747
+
Glu
CTC
[ENA]
¡û
>WENV180834103
ODKD01002940
[ODKD] human metagenome; G_DNA_Supragingival plaque
3288
3215
-
Glu
CTC
[ENA]
¡û
>WENV180843491
ODKN01003687
[ODKN] human metagenome; G_DNA_Supragingival plaque
5208
5135
-
Glu
CTC
[ENA]
¡û
>WENV180844677
ODKN01280365
[ODKN] human metagenome; G_DNA_Supragingival plaque
1
74
+
Glu
CTC
[ENA]
¡û
>WENV180862852
ODLF01013974
[ODLF] human metagenome; G_DNA_Buccal mucosa
471
546
+
Glu
CTC
[ENA]
¡û
>WENV180864113
ODLH01011119
[ODLH] human metagenome; G_DNA_Tongue dorsum
634
707
+
Glu
CTC
[ENA]
¡û
>WENV180865097
ODLI01019037
[ODLI] human metagenome; G_DNA_Buccal mucosa
188
261
+
Glu
CTC
[ENA]
¡û
>WENV180873471
ODLP01007038
[ODLP] human metagenome; G_DNA_Tongue dorsum
89
16
-
Glu
CTC
[ENA]
¡û
>WENV180873532
ODLP01009545
[ODLP] human metagenome; G_DNA_Tongue dorsum
1747
1820
+
Glu
CTC
[ENA]
¡û
>WENV180873822
ODLP01029952
[ODLP] human metagenome; G_DNA_Tongue dorsum
533
606
+
Glu
CTC
[ENA]
¡û
>WENV180879152
ODLZ01000104
[ODLZ] human metagenome; G_DNA_Tongue dorsum
45390
45315
-
Glu
CTC
[ENA]
¡û
>WENV180879224
ODLZ01000232
[ODLZ] human metagenome; G_DNA_Tongue dorsum
21743
21668
-
Glu
CTC
[ENA]
¡û
>WENV180879683
ODLZ01001729
[ODLZ] human metagenome; G_DNA_Tongue dorsum
2193
2120
-
Glu
CTC
[ENA]
¡û
>WENV180880171
ODLZ01009355
[ODLZ] human metagenome; G_DNA_Tongue dorsum
448
375
-
Glu
CTC
[ENA]
¡û
>WENV180884001
ODMC01030462
[ODMC] human metagenome; G_DNA_Tongue dorsum
577
504
-
Glu
CTC
[ENA]
¡û
>WENV180890210
ODMO01000272
[ODMO] human metagenome; G_DNA_Tongue dorsum
17789
17864
+
Glu
CTC
[ENA]
¡û
>WENV180891640
ODMQ01003312
[ODMQ] human metagenome; G_DNA_Supragingival plaque
1807
1734
-
Glu
CTC
[ENA]
¡û
>WENV180891805
ODMQ01015925
[ODMQ] human metagenome; G_DNA_Supragingival plaque
720
647
-
Glu
CTC
[ENA]
¡û
>WENV180897076
ODNI01006208
[ODNI] human metagenome; G_DNA_Tongue dorsum
2
75
+
Glu
CTC
[ENA]
¡û
>WENV180899942
ODOJ01000151
[ODOJ] human metagenome; G_DNA_Tongue dorsum
41437
41510
+
Glu
CTC
[ENA]
¡û
>WENV180899999
ODOJ01000227
[ODOJ] human metagenome; G_DNA_Tongue dorsum
23078
23005
-
Glu
CTC
[ENA]
¡û
>WENV180901615
ODOK01000846
[ODOK] human metagenome; G_DNA_Tongue dorsum
1604
1531
-
Glu
CTC
[ENA]
¡û
>WENV180901923
ODOK01008491
[ODOK] human metagenome; G_DNA_Tongue dorsum
2205
2278
+
Glu
CTC
[ENA]
¡û
>WENV180921204
ODTJ01000001
[ODTJ] human metagenome; G_DNA_Supragingival plaque
205181
205254
+
Glu
CTC
[ENA]
¡û
>WENV180921267
ODTJ01000012
[ODTJ] human metagenome; G_DNA_Supragingival plaque
59169
59242
+
Glu
CTC
[ENA]
¡û
>WENV180932334
ODTP01044216
[ODTP] human metagenome; G_DNA_Tongue dorsum
818
745
-
Glu
CTC
[ENA]
¡û
>WENV180945832
ODUD01000174
[ODUD] human metagenome; G_DNA_Tongue dorsum
24441
24514
+
Glu
CTC
[ENA]
¡û
>WENV180945852
ODUD01000278
[ODUD] human metagenome; G_DNA_Tongue dorsum
8240
8315
+
Glu
CTC
[ENA]
¡û
>WENV180952760
ODUI01001978
[ODUI] human metagenome; G_DNA_Tongue dorsum
2
75
+
Glu
CTC
[ENA]
¡û
>WENV180959617
ODUM01001721
[ODUM] human metagenome; G_DNA_Tongue dorsum
7255
7180
-
Glu
CTC
[ENA]
¡û
>WENV180959647
ODUM01001844
[ODUM] human metagenome; G_DNA_Tongue dorsum
8613
8686
+
Glu
CTC
[ENA]
¡û
>WENV180987901
ODVL01000004
[ODVL] human metagenome; G_DNA_Tongue dorsum
97535
97460
-
Glu
CTC
[ENA]
¡û
>WENV180987992
ODVL01000027
[ODVL] human metagenome; G_DNA_Tongue dorsum
103259
103184
-
Glu
CTC
[ENA]
¡û
>WENV180992134
ODVO01060882
[ODVO] human metagenome; G_DNA_Buccal mucosa
130
203
+
Glu
CTC
[ENA]
¡û
>WENV181006320
ODWA01009609
[ODWA] human metagenome; G_DNA_Buccal mucosa
1
74
+
Glu
CTC
[ENA]
¡û
>WENV181010591
ODWH01078563
[ODWH] human metagenome; G_DNA_Buccal mucosa
99
26
-
Glu
CTC
[ENA]
¡û
>WENV181012085
ODWJ01011195
[ODWJ] human metagenome; G_DNA_Buccal mucosa
159
232
+
Glu
CTC
[ENA]
¡û
>WENV181018749
ODWU01000056
[ODWU] human metagenome; G_DNA_Supragingival plaque
72059
71986
-
Glu
CTC
[ENA]
¡û
>WENV181020293
ODWU01105079
[ODWU] human metagenome; G_DNA_Supragingival plaque
99
172
+
Glu
CTC
[ENA]
¡û
>WENV181020329
ODWU01117456
[ODWU] human metagenome; G_DNA_Supragingival plaque
82
9
-
Glu
CTC
[ENA]
¡û
>WENV181037726
ODXQ01000003
[ODXQ] human metagenome; G_DNA_Tongue dorsum
28681
28756
+
Glu
CTC
[ENA]
¡û
>WENV181039598
ODXQ01031739
[ODXQ] human metagenome; G_DNA_Tongue dorsum
582
507
-
Glu
CTC
[ENA]
¡û
>WENV181043093
ODXU01041787
[ODXU] human metagenome; G_DNA_Buccal mucosa
308
381
+
Glu
CTC
[ENA]
¡û
>WENV181049247
ODYD01000002
[ODYD] human metagenome; G_DNA_Supragingival plaque
132053
131980
-
Glu
CTC
[ENA]
¡û
>WENV181049340
ODYD01000035
[ODYD] human metagenome; G_DNA_Supragingival plaque
65305
65378
+
Glu
CTC
[ENA]
¡û
>WENV181050247
ODYD01010302
[ODYD] human metagenome; G_DNA_Supragingival plaque
82
9
-
Glu
CTC
[ENA]
¡û
>WENV181052999
ODYH01004626
[ODYH] human metagenome; G_DNA_Buccal mucosa
60
133
+
Glu
CTC
[ENA]
¡û
>WENV181065670
ODYV01000004
[ODYV] human metagenome; G_DNA_Buccal mucosa
143320
143395
+
Glu
CTC
[ENA]
¡û
>WENV181065710
ODYV01000025
[ODYV] human metagenome; G_DNA_Buccal mucosa
62197
62124
-
Glu
CTC
[ENA]
¡û
>WENV181069034
ODZZ01008754
[ODZZ] human metagenome; G_DNA_Tongue dorsum
621
694
+
Glu
CTC
[ENA]
¡û
>WENV181069176
ODZZ01017001
[ODZZ] human metagenome; G_DNA_Tongue dorsum
1346
1419
+
Glu
CTC
[ENA]
¡û
>WENV181069846
OEAE01000013
[OEAE] human metagenome; G_DNA_Supragingival plaque
28712
28785
+
Glu
CTC
[ENA]
¡û
>WENV181069913
OEAE01000046
[OEAE] human metagenome; G_DNA_Supragingival plaque
22375
22448
+
Glu
CTC
[ENA]
¡û
>WENV181069972
OEAE01000079
[OEAE] human metagenome; G_DNA_Supragingival plaque
359
432
+
Glu
CTC
[ENA]
¡û
>WENV181070610
OEAE01003998
[OEAE] human metagenome; G_DNA_Supragingival plaque
1148
1221
+
Glu
CTC
[ENA]
¡û
>WENV181081063
OEAS01121216
[OEAS] human metagenome; G_DNA_Supragingival plaque
616
543
-
Glu
CTC
[ENA]
¡û
>WENV181081425
OEAS01206694
[OEAS] human metagenome; G_DNA_Supragingival plaque
356
283
-
Glu
CTC
[ENA]
¡û
>WENV181103031
OECT01021670
[OECT] human metagenome; G_DNA_Tongue dorsum
589
662
+
Glu
CTC
[ENA]
¡û
>WENV181104966
OEED01000583
[OEED] human metagenome; G_DNA_Tongue dorsum
12363
12436
+
Glu
CTC
[ENA]
¡û
>WENV181105618
OEED01009132
[OEED] human metagenome; G_DNA_Tongue dorsum
646
719
+
Glu
CTC
[ENA]
¡û
>WENV181108424
OEEJ01000021
[OEEJ] human metagenome; G_DNA_Tongue dorsum
181169
181094
-
Glu
CTC
[ENA]
¡û
>WENV181108472
OEEJ01000028
[OEEJ] human metagenome; G_DNA_Tongue dorsum
55660
55585
-
Glu
CTC
[ENA]
¡û
>WENV181112993
OEEL01008032
[OEEL] human metagenome; G_DNA_Tongue dorsum
589
662
+
Glu
CTC
[ENA]
¡û
>WENV181113192
OEEL01014491
[OEEL] human metagenome; G_DNA_Tongue dorsum
1602
1675
+
Glu
CTC
[ENA]
¡û
>WENV181125851
OEFU01060547
[OEFU] human metagenome; G_DNA_Saliva
145
218
+
Glu
CTC
[ENA]
¡û
>WENV181130529
OEFY01020262
[OEFY] human metagenome; G_DNA_Throat
691
766
+
Glu
CTC
[ENA]
¡û
>WENV181135791
OEGI01000001
[OEGI] human metagenome; G_DNA_Supragingival plaque
202052
202125
+
Glu
CTC
[ENA]
¡û
>WENV181135799
OEGI01000001
[OEGI] human metagenome; G_DNA_Supragingival plaque
664133
664060
-
Glu
CTC
[ENA]
¡û
>WENV181146523
OEHQ01008152
[OEHQ] human metagenome; G_DNA_Supragingival plaque
2600
2527
-
Glu
CTC
[ENA]
¡û
>WENV181176544
OEJR01011037
[OEJR] human metagenome; G_DNA_Saliva
170
97
-
Glu
CTC
[ENA]
¡û
>WENV181187746
OENZ01002446
[OENZ] human gut metagenome; human gut
540
613
+
Glu
CTC
[ENA]
¡û
>WENV182401793
OIER01017724
[OIER] human gut metagenome; human gut
731
658
-
Glu
CTC
[ENA]
¡û
>W141279369
JAGG01000001
Actinomycetota
Microbacterium sp. KROCY2 [JAGG]
2418281
2418208
-
Glu
CTC
[ENA]
¡û
>W141279370
JAGG01000001
Actinomycetota
Microbacterium sp. KROCY2 [JAGG]
2418084
2418011
-
Glu
CTC
[ENA]
¡û
>WENV183511387
OMJG01000157
[OMJG] food metagenome; Cotija cheese
25645
25572
-
Glu
CTC
[ENA]
¡û
>W141531773
JHEL01000015
Actinomycetota
Curtobacterium sp. S6 [JHEL]
639822
639749
-
Glu
CTC
[ENA]
¡û
>W1910334114
FSNK01000216
Actinomycetota
Mycobacteroides abscessus subsp. abscessus 133 [FSNK]
2455
2382
-
Glu
CTC
[ENA]
¡û
>W1910431591
FVUK01000006
Actinomycetota
Mycobacteroides abscessus subsp. bolletii 137 [FVUK]
186379
186452
+
Glu
CTC
[ENA]
¡û
>W1910431592
FVUK01000006
Actinomycetota
Mycobacteroides abscessus subsp. bolletii 137 [FVUK]
186642
186715
+
Glu
CTC
[ENA]
¡û
>W1910442286
FWFC01000005
Actinomycetota
Kocuria sp. Marseille-P3598 [FWFC]
205745
205818
+
Glu
CTC
[ENA]
¡û
>W1911114541
NOIQ01000001
Actinomycetota
Kocuria koreensis JCM 15915 [NOIQ]
463607
463680
+
Glu
CTC
[ENA]
¡û
>W1911114603
NOIR01000002
Actinomycetota
Kocuria sp. 257 [NOIR]
530135
530062
-
Glu
CTC
[ENA]
¡û
>W1911114632
NOIS01000001
Actinomycetota
Kocuria sp. 36 [NOIS]
729271
729344
+
Glu
CTC
[ENA]
¡û
>W1911114741
NOIU01000002
Actinomycetota
Kocuria halotolerans JCM 31975 [NOIU]
862799
862726
-
Glu
CTC
[ENA]
¡û
>W1911114762
NOIV01000001
Actinomycetota
Kocuria kristinae ATCC 27570 [NOIV]
337453
337526
+
Glu
CTC
[ENA]
¡û
>W1911200080
NREL01000007
Actinomycetota
Mycobacterium abscessus subsp. abscessus A324 [NREL]
31264
31191
-
Glu
CTC
[ENA]
¡û
>W1911200104
NREM01000001
Actinomycetota
Mycobacterium abscessus subsp. abscessus A229 [NREM]
200837
200764
-
Glu
CTC
[ENA]
¡û
>W1911567764
PCPU01000011
Actinomycetota
Arthrobacter sp. MYb224 [PCPU]
17239
17312
+
Glu
CTC
[ENA]
¡û
>W1911567767
PCPU01000017
Actinomycetota
Arthrobacter sp. MYb224 [PCPU]
2596
2669
+
Glu
CTC
[ENA]
¡û
>W1911709346
QPKL01000007
Actinomycetota
Kocuria sp. CPCC 104605 [QPKL]
39777
39850
+
Glu
CTC
[ENA]
¡û
>W1911709347
QPKL01000007
Actinomycetota
Kocuria sp. CPCC 104605 [QPKL]
39946
40021
+
Glu
CTC
[ENA]
¡û
>W1810188836
PKIQ01000002
Actinomycetota
Rothia mucilaginosa UMB0024 [PKIQ]
12048
12121
+
Glu
CTC
[ENA]
¡û
>W1810188843
PKIQ01000002
Actinomycetota
Rothia mucilaginosa UMB0024 [PKIQ]
537143
537068
-
Glu
CTC
[ENA]
¡û
>W1810201543
POAF01000007
Actinomycetota
Glutamicibacter soli NHPC-3 [POAF]
83822
83747
-
Glu
CTC
[ENA]
¡û
>W1810201544
POAF01000007
Actinomycetota
Glutamicibacter soli NHPC-3 [POAF]
83712
83637
-
Glu
CTC
[ENA]
¡û
>W1810201545
POAF01000007
Actinomycetota
Glutamicibacter soli NHPC-3 [POAF]
83602
83527
-
Glu
CTC
[ENA]
¡û
>W1810201555
POAF01000017
Actinomycetota
Glutamicibacter soli NHPC-3 [POAF]
1571
1498
-
Glu
CTC
[ENA]
¡û
>W1810418601
PYQD01000316
Actinomycetota
Mycobacterium tuberculosis AUH17 [PYQD]
368
295
-
Glu
CTC
[ENA]
¡û
>C151095244
CP012507
Actinomycetota
Kocuria palustris MU14/1 [CP012507]
999923
999996
+
Glu
CTC
-
¡û
>C151095245
CP012507
Actinomycetota
Kocuria palustris MU14/1 [CP012507]
1000120
1000193
+
Glu
CTC
-
¡û
>W2010405650
FWFC01000005
Actinomycetota
Kocuria sp. Marseille-P3598 [FWFC]
205745
205818
+
Glu
CTC
[ENA]
¡û
>W2010534852
JAAOZS010000003
Actinomycetota
Kocuria sp. JC486 [JAAOZS]
194724
194797
+
Glu
CTC
[ENA]
¡û
>W2010534853
JAAOZS010000003
Actinomycetota
Kocuria sp. JC486 [JAAOZS]
194911
194984
+
Glu
CTC
[ENA]
¡û
>W2010575322
JAAVUN010000005
Actinomycetota
Kocuria subflava YIM 13062 [JAAVUN]
74825
74752
-
Glu
CTC
[ENA]
¡û
>W2010575323
JAAVUN010000005
Actinomycetota
Kocuria subflava YIM 13062 [JAAVUN]
74656
74581
-
Glu
CTC
[ENA]
¡û
>W2011009052
NOIQ01000001
Actinomycetota
Kocuria koreensis JCM 15915 [NOIQ]
463607
463680
+
Glu
CTC
[ENA]
¡û
>W2011009114
NOIR01000002
Actinomycetota
Kocuria sp. 257 [NOIR]
530135
530062
-
Glu
CTC
[ENA]
¡û
>W2011009143
NOIS01000001
Actinomycetota
Kocuria sp. 36 [NOIS]
729271
729344
+
Glu
CTC
[ENA]
¡û
>W2011009252
NOIU01000002
Actinomycetota
Kocuria halotolerans JCM 31975 [NOIU]
862799
862726
-
Glu
CTC
[ENA]
¡û
>W2011009273
NOIV01000001
Actinomycetota
Kocuria kristinae ATCC 27570 [NOIV]
337453
337526
+
Glu
CTC
[ENA]
¡û
>W2011048296
NREL01000007
Actinomycetota
Mycobacterium abscessus subsp. abscessus A324 [NREL]
31264
31191
-
Glu
CTC
[ENA]
¡û
>W2011048320
NREM01000001
Actinomycetota
Mycobacterium abscessus subsp. abscessus A229 [NREM]
200837
200764
-
Glu
CTC
[ENA]
¡û
>W2011283451
QPKL01000007
Actinomycetota
Kocuria sp. CPCC 104605 [QPKL]
39777
39850
+
Glu
CTC
[ENA]
¡û
>W2011283452
QPKL01000007
Actinomycetota
Kocuria sp. CPCC 104605 [QPKL]
39946
40021
+
Glu
CTC
[ENA]
¡û
>W2011375923
RBLM01000002
Actinomycetota
Kocuria sp. HSID16901 [RBLM]
183931
184004
+
Glu
CTC
[ENA]
¡û
>W2011451975
RKMF01000009
Actinomycetota
Kocuria sp. M5W7-7 [RKMF]
22136
22063
-
Glu
CTC
[ENA]
¡û
>W2011451976
RKMF01000009
Actinomycetota
Kocuria sp. M5W7-7 [RKMF]
21949
21876
-
Glu
CTC
[ENA]
¡û
>W2011538515
SCNB01000002
Actinomycetota
Kocuria sp. 2SI [SCNB]
147304
147377
+
Glu
CTC
[ENA]
¡û
>W2011538516
SCNB01000002
Actinomycetota
Kocuria sp. 2SI [SCNB]
147501
147574
+
Glu
CTC
[ENA]
¡û
>W2011649575
SNXQ01000007
Actinomycetota
Kocuria sp. AG109 [SNXQ]
448811
448884
+
Glu
CTC
[ENA]
¡û
>W2011754013
SZWF01000001
Actinomycetota
Kocuria sp. SCSIO 13007 [SZWF]
308084
308157
+
Glu
CTC
[ENA]
¡û
>W2011754014
SZWF01000001
Actinomycetota
Kocuria sp. SCSIO 13007 [SZWF]
308275
308348
+
Glu
CTC
[ENA]
¡û
>W2011754015
SZWF01000001
Actinomycetota
Kocuria sp. SCSIO 13007 [SZWF]
308466
308539
+
Glu
CTC
[ENA]
¡û
>W2011760386
UASQ01000001
Actinomycetota
Rothia kristinae NCTC11038 [UASQ]
355032
354959
-
Glu
CTC
[ENA]
¡û
>W2011987277
VDOR01000003
Actinomycetota
Kocuria palustris DE0549 [VDOR]
243965
243892
-
Glu
CTC
[ENA]
¡û
>W2011987278
VDOR01000003
Actinomycetota
Kocuria palustris DE0549 [VDOR]
243761
243688
-
Glu
CTC
[ENA]
¡û
>W2011987772
VDPH01000001
Actinomycetota
Rothia mucilaginosa DE0531 [VDPH]
85244
85171
-
Glu
CTC
[ENA]
¡û
>W2012006720
VEKI01000001
Actinomycetota
Rothia kristinae DE0322 [VEKI]
255453
255526
+
Glu
CTC
[ENA]
¡û
>W2012406454
WOGT01000001
Actinomycetota
Kocuria koreensis JCM 15915 [WOGT]
573575
573648
+
Glu
CTC
[ENA]
¡û
>W2110074562
CABFMC010000005
Actinomycetota
Rothia dentocariosa [CABFMC]
295687
295614
-
Glu
CTC
[ENA]
¡û
>W2110074569
CABFMC010000006
Actinomycetota
Rothia dentocariosa [CABFMC]
151634
151561
-
Glu
CTC
[ENA]
¡û
>W2110371588
JADPWM010000021
Actinomycetota
Rothia kristinae GM [JADPWM]
25715
25788
+
Glu
CTC
[ENA]
¡û
>W2110459198
JAFBCR010000001
Actinomycetota
Kocuria palustris TAGA27 [JAFBCR]
2655101
2655174
+
Glu
CTC
[ENA]
¡û
>W2110459199
JAFBCR010000001
Actinomycetota
Kocuria palustris TAGA27 [JAFBCR]
2655298
2655371
+
Glu
CTC
[ENA]
¡û
>W2110477239
JAFDPC010000001
Actinomycetota
Kocuria palustris F5_7S_P11C [JAFDPC]
335640
335713
+
Glu
CTC
[ENA]
¡û
>W2110477240
JAFDPC010000001
Actinomycetota
Kocuria palustris F5_7S_P11C [JAFDPC]
335837
335910
+
Glu
CTC
[ENA]
¡û
>W2110477415
JAFDPI010000001
Actinomycetota
Kocuria palustris F5_7S_P2A [JAFDPI]
463092
463019
-
Glu
CTC
[ENA]
¡û
>W2110477416
JAFDPI010000001
Actinomycetota
Kocuria palustris F5_7S_P2A [JAFDPI]
462895
462822
-
Glu
CTC
[ENA]
¡û
>W2110477454
JAFDPJ010000001
Actinomycetota
Kocuria palustris F5_7S_P2B [JAFDPJ]
335279
335352
+
Glu
CTC
[ENA]
¡û
>W2110477455
JAFDPJ010000001
Actinomycetota
Kocuria palustris F5_7S_P2B [JAFDPJ]
335476
335549
+
Glu
CTC
[ENA]
¡û
>W2110477649
JAFDPR010000001
Actinomycetota
Kocuria palustris F5_7S_P7 [JAFDPR]
335506
335579
+
Glu
CTC
[ENA]
¡û
>W2110477650
JAFDPR010000001
Actinomycetota
Kocuria palustris F5_7S_P7 [JAFDPR]
335703
335776
+
Glu
CTC
[ENA]
¡û
>W2110477699
JAFDPS010000001
Actinomycetota
Kocuria palustris F5_7S_P8 [JAFDPS]
159497
159424
-
Glu
CTC
[ENA]
¡û
>W2110477700
JAFDPS010000001
Actinomycetota
Kocuria palustris F5_7S_P8 [JAFDPS]
159300
159227
-
Glu
CTC
[ENA]
¡û
>W2110477737
JAFDPT010000001
Actinomycetota
Kocuria palustris F6_1S_P_2 [JAFDPT]
335279
335352
+
Glu
CTC
[ENA]
¡û
>W2110477738
JAFDPT010000001
Actinomycetota
Kocuria palustris F6_1S_P_2 [JAFDPT]
335476
335549
+
Glu
CTC
[ENA]
¡û
>W2110478205
JAFDQD010000001
Actinomycetota
Kocuria palustris F6_7S_B_1 [JAFDQD]
335516
335589
+
Glu
CTC
[ENA]
¡û
>W2110478206
JAFDQD010000001
Actinomycetota
Kocuria palustris F6_7S_B_1 [JAFDQD]
335713
335786
+
Glu
CTC
[ENA]
¡û
>C201019904
AP022830
Actinomycetota
Kocuria sp. TGY1120_3 [AP022830]
1154325
1154398
+
Glu
CTC
-
¡û
>W2110696590
JAIUDH010000003
Actinomycetota
Rothia kristinae alder54 [JAIUDH]
102738
102665
-
Glu
CTC
[ENA]
¡û
>C211103722
CP056080
Actinomycetota
Rothia nasimurium E1706032 [CP056080]
993304
993377
+
Glu
CTC
-
¡û
>C211103723
CP056080
Actinomycetota
Rothia nasimurium E1706032 [CP056080]
993621
993694
+
Glu
CTC
-
¡û
>C211148930
CP061539
Actinomycetota
Rothia terrae KJZ-14 [CP061539]
1064412
1064485
+
Glu
CTC
-
¡û
>C211148931
CP061539
Actinomycetota
Rothia terrae KJZ-14 [CP061539]
1064638
1064711
+
Glu
CTC
-
¡û
>C211214274
CP065738
Actinomycetota
Rothia kristinae FDAARGOS_864 [CP065738]
2337236
2337163
-
Glu
CTC
-
¡û
>C211222098
CP066078
Actinomycetota
Rothia kristinae FDAARGOS_1001 [CP066078]
2455434
2455507
+
Glu
CTC
-
¡û
>C211370748
CP079819
Actinomycetota
Rothia aeria LPB0401 [CP079819]
767777
767850
+
Glu
CTC
-
¡û
>C211370772
CP079819
Actinomycetota
Rothia aeria LPB0401 [CP079819]
1319885
1319812
-
Glu
CTC
-
¡û
>W10111892
ADDW01000001
Actinomycetota
Rothia dentocariosa M567 [ADDW]
200099
200172
+
Glu
CTC
[ENA]
¡û
>W10111903
ADDW01000002
Actinomycetota
Rothia dentocariosa M567 [ADDW]
176674
176601
-
Glu
CTC
[ENA]
¡û
>C231378415
CP097094
Actinomycetota
Rothia mucilaginosa [CP097094]
835695
835768
+
Glu
CTC
-
¡û
>C231378437
CP097094
Actinomycetota
Rothia mucilaginosa [CP097094]
1380888
1380815
-
Glu
CTC
-
¡û
>C231551788
CP113782
Actinomycetota
Rothia kristinae ND-2018N [CP113782]
1001357
1001430
+
Glu
CTC
-
¡û
>C241006845
AP022834
Actinomycetota
Kocuria sp. TGY1127_2 [AP022834]
1205544
1205617
+
Glu
CTC
-
¡û
>W2310027348
BSQO01000002
Actinomycetota
Kocuria sp. NBRC 114282 [BSQO]
488478
488551
+
Glu
CTC
[ENA]
¡û
>W2310027349
BSQO01000002
Actinomycetota
Kocuria sp. NBRC 114282 [BSQO]
488675
488748
+
Glu
CTC
[ENA]
¡û
>C10110705
AP011540
Actinomycetota
Rothia mucilaginosa DY-18 [AP011540]
824749
824822
+
Glu
CTC
[Ensembl]
¡û
>C10110728
AP011540
Actinomycetota
Rothia mucilaginosa DY-18 [AP011540]
1359053
1358978
-
Glu
CTC
[Ensembl]
¡û
>W11114869
ADDW01000001
Actinomycetota
Rothia dentocariosa M567 [ADDW]
200099
200172
+
Glu
CTC
[ENA]
¡û
>W11114880
ADDW01000002
Actinomycetota
Rothia dentocariosa M567 [ADDW]
176674
176601
-
Glu
CTC
[ENA]
¡û
>W1511459339
JVKI01000002
Actinomycetota
Leifsonia xyli 356_LXYL [JVKI]
14647
14720
+
Glu
CTC
[ENA]
¡û
>C161002134
AP014938
Actinomycetota
Rothia mucilaginosa NUM-Rm6536 [AP014938]
1846289
1846362
+
Glu
CTC
[Ensembl]
¡û
>C161002159
AP014938
Actinomycetota
Rothia mucilaginosa NUM-Rm6536 [AP014938]
91269
91196
-
Glu
CTC
[Ensembl]
¡û
>W1610069432
BCSM01000001
Actinomycetota
Rothia kristinae NBRC 15354 [BCSM]
69328
69255
-
Glu
CTC
[ENA]
¡û
>W1610112201
CZJR01000058
Actinomycetota
Kocuria palustris [CZJR]
90567
90494
-
Glu
CTC
[ENA]
¡û
>W1610112202
CZJR01000058
Actinomycetota
Kocuria palustris [CZJR]
90370
90297
-
Glu
CTC
[ENA]
¡û
>W1610590100
LDRD01000084
Actinomycetota
Rothia kristinae [LDRD]
12654
12581
-
Glu
CTC
[ENA]
¡û
>W1610590137
LDRE01000079
Actinomycetota
Rothia kristinae [LDRE]
12679
12606
-
Glu
CTC
[ENA]
¡û
>W1610590200
LDRG01000016
Actinomycetota
Rothia kristinae [LDRG]
3626
3699
+
Glu
CTC
[ENA]
¡û
>W1610590294
LDRI01000041
Actinomycetota
Rothia kristinae [LDRI]
12654
12581
-
Glu
CTC
[ENA]
¡û
>W1610590347
LDRJ01000077
Actinomycetota
Rothia kristinae [LDRJ]
340
413
+
Glu
CTC
[ENA]
¡û
>W1610641482
LJBJ02000016
Actinomycetota
Rothia kristinae [LJBJ]
31543
31470
-
Glu
CTC
[ENA]
¡û
>W1610851032
LQBJ01000011
Actinomycetota
Kocuria palustris [LQBJ]
158969
158896
-
Glu
CTC
[ENA]
¡û
>W1610851033
LQBJ01000011
Actinomycetota
Kocuria palustris [LQBJ]
158772
158699
-
Glu
CTC
[ENA]
¡û
>W1610986781
LWGZ01000878
Actinomycetota
Rothia kristinae [LWGZ]
248
175
-
Glu
CTC
[ENA]
¡û
>W1710066805
BCSM01000001
Actinomycetota
Rothia kristinae NBRC 15354 [BCSM]
69328
69255
-
Glu
CTC
[ENA]
¡û
>W1710114905
CZJR01000058
Actinomycetota
Kocuria palustris [CZJR]
90567
90494
-
Glu
CTC
[ENA]
¡û
>W1710114906
CZJR01000058
Actinomycetota
Kocuria palustris [CZJR]
90370
90297
-
Glu
CTC
[ENA]
¡û
>W1710709380
LDRD01000084
Actinomycetota
Rothia kristinae [LDRD]
12654
12581
-
Glu
CTC
[ENA]
¡û
>W1710709417
LDRE01000079
Actinomycetota
Rothia kristinae [LDRE]
12679
12606
-
Glu
CTC
[ENA]
¡û
>W1710709480
LDRG01000016
Actinomycetota
Rothia kristinae [LDRG]
3626
3699
+
Glu
CTC
[ENA]
¡û
>W1710709574
LDRI01000041
Actinomycetota
Rothia kristinae [LDRI]
12654
12581
-
Glu
CTC
[ENA]
¡û
>W1710709627
LDRJ01000077
Actinomycetota
Rothia kristinae [LDRJ]
340
413
+
Glu
CTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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