tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.259905 (60 seq.)
>W1710785572 LJHZ01000017 Alphaproteobacteria Novosphingobium sp. AAP93 [LJHZ] 49944 50019 + Trp CCA [ENA] ¡û
>W131045549 AMRN01000017 Alphaproteobacteria Thalassospira profundimaris WP0211 [AMRN] 194 269 + Trp CCA [ENA] ¡û
>W1710989418 LPVX01000018 Alphaproteobacteria Thalassospira sp. MCCC 1A02491 [LPVX] 249 324 + Trp CCA [ENA] ¡û
>W1710989518 LPVZ01000014 Alphaproteobacteria Thalassospira sp. MCCC 1A01148 [LPVZ] 232 307 + Trp CCA [ENA] ¡û
>W1710991077 LPXK01000005 Alphaproteobacteria Thalassospira sp. MCCC 1A02898 [LPXK] 15624 15549 - Trp CCA [ENA] ¡û
>W1711078073 LSMN01000002 Alphaproteobacteria Thalassospira sp. Nap_22 [LSMN] 267 342 + Trp CCA [ENA] ¡û
>W1711220340 LXQI01000037 Alphaproteobacteria Erythrobacter sp. ANT-B3C2 [LXQI] 80151 80226 + Trp CCA [ENA] ¡û
>WENV180041075 LLBZ010040430 [LLBZ] soil metagenome; soil from tomato rhizosphere 76 1 - Trp CCA [ENA] ¡û
>WENV180690454 OCZS010007204 [OCZS] soil metagenome; soil 1139 1214 + Trp CCA [ENA] ¡û
>WENV170199312 CEPL01100842 [CEPL] marine metagenome genome assembly TARA_045_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 208 283 + Trp CCA [ENA] ¡û
>WENV170222031 CEQC01074948 [CEQC] marine metagenome genome assembly TARA_076_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2 77 + Trp CCA [ENA] ¡û
>WENV170222602 CEQD01044874 [CEQD] marine metagenome genome assembly TARA_042_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3106 3181 + Trp CCA [ENA] ¡û
>WENV170230602 CEQH01052540 [CEQH] marine metagenome genome assembly TARA_076_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 93 168 + Trp CCA [ENA] ¡û
>WENV170255581 CEQX01006770 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 554 479 - Trp CCA [ENA] ¡û
>WENV170260470 CEQZ01049076 [CEQZ] marine metagenome genome assembly TARA_070_MES_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 199 274 + Trp CCA [ENA] ¡û
>WENV170263018 CERC01012305 [CERC] marine metagenome genome assembly TARA_070_MES_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6828 6753 - Trp CCA [ENA] ¡û
>WENV170267339 CERF01071122 [CERF] marine metagenome genome assembly TARA_072_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 650 575 - Trp CCA [ENA] ¡û
>WENV170276804 CERO01032243 [CERO] marine metagenome genome assembly TARA_068_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2106 2031 - Trp CCA [ENA] ¡û
>WENV170356941 CETJ01083991 [CETJ] marine metagenome genome assembly TARA_122_MES_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 128 53 - Trp CCA [ENA] ¡û
>WENV170519963 CEWE01263645 [CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4602 4527 - Trp CCA [ENA] ¡û
>WENV170653535 JRYJ01004761 [JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated 237 312 + Trp CCA [ENA] ¡û
>WENV170842564 MDSZ01243042 [MDSZ] marine metagenome; seawater 248 323 + Trp CCA [ENA] ¡û
>WENV170991210 MWWA01134294 [MWWA] soil metagenome; MS5-1 sample; Antarctic (ecotone) soil 352 427 + Trp CCA [ENA] ¡û
>C181202071 CP031555 Alphaproteobacteria Thalassospira indica PB8BT [CP031555] 1882064 1882139 + Trp CCA - ¡û
>W1910574326 JPWB01000016 Alphaproteobacteria Thalassospira profundimaris R8-17 [JPWB] 173 248 + Trp CCA [ENA] ¡û
>W1910574369 JPWC01000023 Alphaproteobacteria Thalassospira profundimaris R4-5 [JPWC] 37 112 + Trp CCA [ENA] ¡û
>W1910574460 JPWF01000030 Alphaproteobacteria Thalassospira profundimaris 35 [JPWF] 192 267 + Trp CCA [ENA] ¡û
>W1910574607 JPWI01000024 Alphaproteobacteria Thalassospira profundimaris PR54-5 [JPWI] 180 255 + Trp CCA [ENA] ¡û
>W1810101878 PGTS01000011 Alphaproteobacteria Thalassospira povalilytica Zumi 95 [PGTS] 15548 15473 - Trp CCA [ENA] ¡û
>W1810579378 QEQM01000001 Alphaproteobacteria Sphingomonas sp. URHD0007 [QEQM] 707024 707099 + Trp CCA [ENA] ¡û
>W1810597598 QGHL01000004 Alphaproteobacteria Novosphingobium meiothermophilum SYSU G00007 [QGHL] 423389 423314 - Trp CCA [ENA] ¡û
>W2010567475 JAATJD010000002 Alphaproteobacteria Thalassospira tepidiphila DSM 18888 [JAATJD] 290490 290565 + Trp CCA [ENA] ¡û
>W2010569727 JAATOV010000005 Alphaproteobacteria Thalassospira lucentensis HF2 [JAATOV] 257328 257403 + Trp CCA [ENA] ¡û
>W2010572469 JAAVKI010000004 Alphaproteobacteria Thalassospira sp. HF15 [JAAVKI] 330238 330163 - Trp CCA [ENA] ¡û
>W2010759807 JPWB01000016 Alphaproteobacteria Thalassospira profundimaris R8-17 [JPWB] 173 248 + Trp CCA [ENA] ¡û
>W2010759850 JPWC01000023 Alphaproteobacteria Thalassospira profundimaris R4-5 [JPWC] 37 112 + Trp CCA [ENA] ¡û
>W2010759941 JPWF01000030 Alphaproteobacteria Thalassospira profundimaris 35 [JPWF] 192 267 + Trp CCA [ENA] ¡û
>W2010760088 JPWI01000024 Alphaproteobacteria Thalassospira profundimaris PR54-5 [JPWI] 180 255 + Trp CCA [ENA] ¡û
>W2011354309 RAPP01000002 Alphaproteobacteria Thalassospira sp. DSM 26710 [RAPP] 715598 715523 - Trp CCA [ENA] ¡û
>W2012354008 WJSQ01000071 Alphaproteobacteria Sphingomonas sp. YJ09 [WJSQ] 11688 11763 + Trp CCA [ENA] ¡û
>W2110423568 JAEKJW010000002 Alphaproteobacteria Thalassospira povalilytica SY-2-3 [JAEKJW] 236195 236270 + Trp CCA [ENA] ¡û
>C211206611 CP065428 Alphaproteobacteria Thalassospira sp. A40-3 [CP065428] 2683545 2683470 - Trp CCA - ¡û
>C211397926 CP082839 Alphaproteobacteria Sphingomonas sp. AK-PDB1-5 [CP082839] 4117395 4117470 + Trp CCA - ¡û
>W2110761439 QTKV01000001 Alphaproteobacteria Thalassospira tepidiphila BEBW28 [QTKV] 96791 96866 + Trp CCA [ENA] ¡û
>C231393111 CP097807 Alphaproteobacteria Thalassospira sp. GO-4 [CP097807] 146251 146326 + Trp CCA - ¡û
>W2110772037 VDEZ01000009 Alphaproteobacteria Thalassospira sp. ER-Se-21-Dark [VDEZ] 1314 1389 + Trp CCA [ENA] ¡û
>C241010581 AP027267 Alphaproteobacteria Thalassospira tepidiphila IFOP_LL337 [AP027267] 2699188 2699113 - Trp CCA - ¡û
>C241010682 AP027269 Alphaproteobacteria Thalassospira tepidiphila 191114_A09 [AP027269] 2669564 2669489 - Trp CCA - ¡û
>W1511347350 JRJE01000019 Alphaproteobacteria Thalassospira australica NP3b2 [JRJE] 15646 15571 - Trp CCA [ENA] ¡û
>W1511528534 JYII01000012 Alphaproteobacteria Thalassospira sp. HJ [JYII] 193250 193325 + Trp CCA [ENA] ¡û
>W1610527063 JPVZ01000018 Alphaproteobacteria Thalassospira tepidiphila MCCC 1A03514 [JPVZ] 15568 15493 - Trp CCA [ENA] ¡û
>W1610527108 JPWE01000020 Alphaproteobacteria Thalassospira profundimaris [JPWE] 15569 15494 - Trp CCA [ENA] ¡û
>W1610844294 LPVX01000018 Alphaproteobacteria Thalassospira sp. MCCC 1A02491 [LPVX] 249 324 + Trp CCA [ENA] ¡û
>W1610844394 LPVZ01000014 Alphaproteobacteria Thalassospira sp. MCCC 1A01148 [LPVZ] 232 307 + Trp CCA [ENA] ¡û
>W1610845749 LPXK01000005 Alphaproteobacteria Thalassospira sp. MCCC 1A02898 [LPXK] 15624 15549 - Trp CCA [ENA] ¡û
>W1610917089 LSMN01000002 Alphaproteobacteria Thalassospira sp. Nap_22 [LSMN] 267 342 + Trp CCA [ENA] ¡û
>W1611004812 LXQI01000037 Alphaproteobacteria Erythrobacter sp. ANT-B3C2 [LXQI] 80151 80226 + Trp CCA [ENA] ¡û
>W1710613484 JAMA01000013 Alphaproteobacteria Thalassospira sp. MCCC 1A02803 [JAMA] 184 259 + Trp CCA [ENA] ¡û
>W1710628618 JPVZ01000018 Alphaproteobacteria Thalassospira tepidiphila MCCC 1A03514 [JPVZ] 15568 15493 - Trp CCA [ENA] ¡û
>W1710628663 JPWE01000020 Alphaproteobacteria Thalassospira profundimaris [JPWE] 15569 15494 - Trp CCA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK