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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.26345 (218 seq.)
>W1710912983
LNSB01000040
Alphaproteobacteria
Sphingopyxis sp. HIX [LNSB]
37438
37349
-
Ser
GCT
[ENA]
¡û
>W1710913019
LNSC01000037
Alphaproteobacteria
Sphingopyxis sp. HXXIV [LNSC]
10645
10734
+
Ser
GCT
[ENA]
¡û
>W1710913364
LNSK01000002
Alphaproteobacteria
Sphingopyxis sp. A083 [LNSK]
169212
169301
+
Ser
GCT
[ENA]
¡û
>W1711074102
LSJF01000192
Alphaproteobacteria
Sphingomonas sp. CCH9-H8 [LSJF]
6110
6199
+
Ser
GCT
[ENA]
¡û
>W1711074411
LSJM01000416
Alphaproteobacteria
Sphingomonas sp. CCH9-E2 [LSJM]
6819
6908
+
Ser
GCT
[ENA]
¡û
>W1711127840
LURA01000007
Alphaproteobacteria
Sphingopyxis sp. REDSEA-S22_B5 [LURA]
76224
76135
-
Ser
GCT
[ENA]
¡û
>W1711127899
LURB01000072
Alphaproteobacteria
Sphingopyxis sp. REDSEA-S23_B6 [LURB]
36523
36612
+
Ser
GCT
[ENA]
¡û
>W1711127955
LURE01000020
Alphaproteobacteria
Sphingopyxis sp. REDSEA-S29_B3 [LURE]
106730
106641
-
Ser
GCT
[ENA]
¡û
>W1711128063
LURI01000004
Alphaproteobacteria
Sphingopyxis sp. REDSEA-S42_B3 [LURI]
1320247
1320158
-
Ser
GCT
[ENA]
¡û
>W1711503944
MKUC01000006
Alphaproteobacteria
Sphingopyxis sp. 65-8 [MKUC]
68199
68288
+
Ser
GCT
[ENA]
¡û
>C171084808
CP018820
Alphaproteobacteria
Sphingomonas koreensis ABOJV [CP018820]
601686
601597
-
Ser
GCT
-
¡û
>C171094552
CP019449
Alphaproteobacteria
Sphingopyxis sp. QXT-31 [CP019449]
966052
966141
+
Ser
GCT
-
¡û
>W131100441
AOUN01000023
Alphaproteobacteria
Sphingopyxis sp. MC1 [AOUN]
31050
30961
-
Ser
GCT
[ENA]
¡û
>WENV180016529
FSVG01001831
[FSVG] metagenome; soil
6652
6563
-
Ser
GCT
[ENA]
¡û
>WENV180397741
OBPZ01002790
[OBPZ] marine metagenome; ENVO:00002010
831
742
-
Ser
GCT
[ENA]
¡û
>WENV181168281
OEIU01249204
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
227
138
-
Ser
GCT
[ENA]
¡û
>WENV181308393
OFIS01010596
[OFIS] sludge metagenome; sludge
929
840
-
Ser
GCT
[ENA]
¡û
>WENV181311883
OFJB01018991
[OFJB] sludge metagenome; sludge
1100
1011
-
Ser
GCT
[ENA]
¡û
>WENV181386578
OFRL01007170
[OFRL] wastewater metagenome; Lake Maggiore Cannobio
1977
1888
-
Ser
GCT
[ENA]
¡û
>WENV181400573
OFSF01011153
[OFSF] wastewater metagenome; Exp Tend VB 100WW
309
220
-
Ser
GCT
[ENA]
¡û
>WENV181402456
OFTY01001825
[OFTY] sludge metagenome; sludge
6918
6829
-
Ser
GCT
[ENA]
¡û
>WENV170002359
AGTN01003240
[AGTN] bioreactor metagenome; poplar biomass
107
196
+
Ser
GCT
[ENA]
¡û
>WENV170579210
FUFK010038298
[FUFK] metagenome; unknown
7478
7389
-
Ser
GCT
[ENA]
¡û
>WENV170582783
FUFK010111429
[FUFK] metagenome; unknown
1210
1121
-
Ser
GCT
[ENA]
¡û
>WENV170727497
LULE01000234
[LULE] marine metagenome; Red Sea water column Station 192 - depth 10m
1022
1111
+
Ser
GCT
[ENA]
¡û
>WENV170728924
LULF01002780
[LULF] marine metagenome; Red Sea water column Station 169 - depth 500m
431
520
+
Ser
GCT
[ENA]
¡û
>WENV170729855
LULG01002632
[LULG] marine metagenome; Red Sea water column Station 169 - depth 200m
3206
3117
-
Ser
GCT
[ENA]
¡û
>WENV170731283
LULH01053384
[LULH] marine metagenome; Red Sea water column Station 169 - depth 100m
424
335
-
Ser
GCT
[ENA]
¡û
>WENV170732372
LULI01041283
[LULI] marine metagenome; Red Sea water column Station 169 - depth 50m
489
578
+
Ser
GCT
[ENA]
¡û
>WENV170732683
LULJ01000545
[LULJ] marine metagenome; Red Sea water column Station 169 - depth 25m
6403
6314
-
Ser
GCT
[ENA]
¡û
>WENV170734707
LULK01015114
[LULK] marine metagenome; Red Sea water column Station 169 - depth 10m
1301
1390
+
Ser
GCT
[ENA]
¡û
>WENV170736526
LULM01006405
[LULM] marine metagenome; Red Sea water column Station 149 - depth 200m
2187
2276
+
Ser
GCT
[ENA]
¡û
>WENV170737443
LULO01000123
[LULO] marine metagenome; Red Sea water column Station 149 - depth 50m
2787
2876
+
Ser
GCT
[ENA]
¡û
>WENV170738358
LULP01000033
[LULP] marine metagenome; Red Sea water column Station 149 - depth 25m
106730
106641
-
Ser
GCT
[ENA]
¡û
>WENV170739570
LULQ01003662
[LULQ] marine metagenome; Red Sea water column Station 149 - depth 10m
1586
1675
+
Ser
GCT
[ENA]
¡û
>WENV170741318
LULS01021955
[LULS] marine metagenome; Red Sea water column Station 108 - depth 200m
218
307
+
Ser
GCT
[ENA]
¡û
>WENV170742739
LULV01000359
[LULV] marine metagenome; Red Sea water column Station 108 - depth 25m
36523
36612
+
Ser
GCT
[ENA]
¡û
>WENV170759514
LUMT01000002
[LUMT] marine metagenome; Red Sea water column Station 192 - depth 50m
1320247
1320158
-
Ser
GCT
[ENA]
¡û
>WENV170761374
LUMV01000111
[LUMV] marine metagenome; Red Sea water column Station 192 - depth 200m
435
346
-
Ser
GCT
[ENA]
¡û
>W1910501768
FYAT01000012
Alphaproteobacteria
Sphingopyxis sp. P1IMeth2 [FYAT]
456215
456126
-
Ser
GCT
[ENA]
¡û
>W1911411555
NWUR01000001
Alphaproteobacteria
Sphingopyxis ummariensis DSM 24316 [NWUR]
356359
356270
-
Ser
GCT
[ENA]
¡û
>W1911687927
QLJC01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env8_1116 [QLJC]
24572
24661
+
Ser
GCT
[ENA]
¡û
>W1911687964
QLJD01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env4_1116 [QLJD]
60549
60638
+
Ser
GCT
[ENA]
¡û
>W1911688032
QLJE01000007
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env3_1116 [QLJE]
24582
24671
+
Ser
GCT
[ENA]
¡û
>W1911688053
QLJF01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env2_1116 [QLJF]
60547
60636
+
Ser
GCT
[ENA]
¡û
>W1911688132
QLJG01000015
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt6_1016 [QLJG]
37624
37535
-
Ser
GCT
[ENA]
¡û
>W1911688215
QLJI01000009
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt4_0816 [QLJI]
24575
24664
+
Ser
GCT
[ENA]
¡û
>W1911688253
QLJJ01000006
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt2_0716 [QLJJ]
24575
24664
+
Ser
GCT
[ENA]
¡û
>W1911688377
QLJL01000033
Alphaproteobacteria
Sphingomonas sp. S-NIH.Pt1_0416 [QLJL]
319
408
+
Ser
GCT
[ENA]
¡û
>W1911718453
QQWJ01000001
Alphaproteobacteria
Sphingomonas koreensis KCTC 2883 [QQWJ]
385217
385306
+
Ser
GCT
[ENA]
¡û
>W1911718515
QQWK01000007
Alphaproteobacteria
Sphingomonas koreensis KCTC 2882 [QQWK]
98926
99015
+
Ser
GCT
[ENA]
¡û
>W1911718560
QQWL01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env11_0417 [QQWL]
219228
219139
-
Ser
GCT
[ENA]
¡û
>W1911718606
QQWM01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env15_0417 [QQWM]
85987
86076
+
Ser
GCT
[ENA]
¡û
>W1911718656
QQWN01000015
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env12_0417 [QQWN]
86993
87082
+
Ser
GCT
[ENA]
¡û
>W1911718691
QQWO01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env10_0317 [QQWO]
234515
234426
-
Ser
GCT
[ENA]
¡û
>W1911718745
QQWP01000008
Alphaproteobacteria
Sphingomonas koreensis SK-NY1_0417 [QQWP]
166621
166532
-
Ser
GCT
[ENA]
¡û
>W1911718783
QQWQ01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env9_0217 [QQWQ]
87143
87232
+
Ser
GCT
[ENA]
¡û
>W1911718851
QQWR01000021
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt10_0210 [QQWR]
24574
24663
+
Ser
GCT
[ENA]
¡û
>W1911718879
QQWS01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt9_0208 [QQWS]
86822
86911
+
Ser
GCT
[ENA]
¡û
>W1911718903
QQWT01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt8_0208 [QQWT]
42644
42733
+
Ser
GCT
[ENA]
¡û
>W1911718949
QQWU01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt7_0906 [QQWU]
87147
87236
+
Ser
GCT
[ENA]
¡û
>W1911719245
QQXA01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt14_0612 [QQXA]
24577
24666
+
Ser
GCT
[ENA]
¡û
>W1911719316
QQXB01000006
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt16_1112 [QQXB]
24629
24718
+
Ser
GCT
[ENA]
¡û
>W1911719355
QQXC01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt11_0411 [QQXC]
24575
24664
+
Ser
GCT
[ENA]
¡û
>W1911719418
QQXD01000028
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt12_0112 [QQXD]
24567
24656
+
Ser
GCT
[ENA]
¡û
>W1911719441
QQXE01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env5_1116 [QQXE]
60537
60626
+
Ser
GCT
[ENA]
¡û
>W1911719482
QQXF01000006
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env7_1116 [QQXF]
24572
24661
+
Ser
GCT
[ENA]
¡û
>W1911719527
QQXG01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env1_1016 [QQXG]
309075
308986
-
Ser
GCT
[ENA]
¡û
>W1911719828
QQXQ01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env56_1217 [QQXQ]
314371
314282
-
Ser
GCT
[ENA]
¡û
>W1911719873
QQXR01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env55_1217 [QQXR]
234515
234426
-
Ser
GCT
[ENA]
¡û
>W1911719920
QQXS01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env54_1217 [QQXS]
42645
42734
+
Ser
GCT
[ENA]
¡û
>W1911719967
QQXT01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env57_1217 [QQXT]
60549
60638
+
Ser
GCT
[ENA]
¡û
>W1911720014
QQXU01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env53_1017 [QQXU]
87087
87176
+
Ser
GCT
[ENA]
¡û
>W1911720064
QQXV01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env52_1017 [QQXV]
234515
234426
-
Ser
GCT
[ENA]
¡û
>W1911720109
QQXW01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env51_1017 [QQXW]
244730
244641
-
Ser
GCT
[ENA]
¡û
>W1911720154
QQXX01000006
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env50_1017 [QQXX]
234515
234426
-
Ser
GCT
[ENA]
¡û
>W1911720195
QQXY01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env47_1017 [QQXY]
24557
24646
+
Ser
GCT
[ENA]
¡û
>W1911720242
QQXZ01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env46_1017 [QQXZ]
234515
234426
-
Ser
GCT
[ENA]
¡û
>W1911720304
QQYA01000020
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env49_1017 [QQYA]
37618
37529
-
Ser
GCT
[ENA]
¡û
>W1911720329
QQYB01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env48_1017 [QQYB]
234515
234426
-
Ser
GCT
[ENA]
¡û
>W1911720375
QQYC01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env45_1017 [QQYC]
215736
215647
-
Ser
GCT
[ENA]
¡û
>W1911720437
QQYD01000021
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env44_0817 [QQYD]
45666
45577
-
Ser
GCT
[ENA]
¡û
>W1911720473
QQYE01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env43_0817 [QQYE]
234515
234426
-
Ser
GCT
[ENA]
¡û
>W1911720509
QQYF01000006
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env42_0817 [QQYF]
234515
234426
-
Ser
GCT
[ENA]
¡û
>W1911720553
QQYG01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env41_0817 [QQYG]
234515
234426
-
Ser
GCT
[ENA]
¡û
>W1911720594
QQYH01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env40_0817 [QQYH]
234515
234426
-
Ser
GCT
[ENA]
¡û
>W1911720640
QQYI01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env39_0817 [QQYI]
234515
234426
-
Ser
GCT
[ENA]
¡û
>W1911720692
QQYJ01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env36_0717 [QQYJ]
277937
277848
-
Ser
GCT
[ENA]
¡û
>W1911720738
QQYK01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env38_0817 [QQYK]
24597
24686
+
Ser
GCT
[ENA]
¡û
>W1911720780
QQYL01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env37_0717 [QQYL]
309172
309083
-
Ser
GCT
[ENA]
¡û
>W1911720826
QQYM01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env35_0717 [QQYM]
290393
290304
-
Ser
GCT
[ENA]
¡û
>W1911720868
QQYN01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env34_0717 [QQYN]
309172
309083
-
Ser
GCT
[ENA]
¡û
>W1911720938
QQYO01000021
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env33_0717 [QQYO]
37671
37582
-
Ser
GCT
[ENA]
¡û
>W1911720958
QQYP01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env32_0717 [QQYP]
309172
309083
-
Ser
GCT
[ENA]
¡û
>W1911721006
QQYQ01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env31_0717 [QQYQ]
309172
309083
-
Ser
GCT
[ENA]
¡û
>W1911721057
QQYR01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env30_0717 [QQYR]
309075
308986
-
Ser
GCT
[ENA]
¡û
>W1911721119
QQYS01000016
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env29_0717 [QQYS]
45666
45577
-
Ser
GCT
[ENA]
¡û
>W1911721151
QQYT01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env28_0717 [QQYT]
290393
290304
-
Ser
GCT
[ENA]
¡û
>W1911721212
QQYU01000014
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env27_0717 [QQYU]
45569
45480
-
Ser
GCT
[ENA]
¡û
>W1911721231
QQYV01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env26_0717 [QQYV]
309172
309083
-
Ser
GCT
[ENA]
¡û
>W1911721301
QQYW01000018
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env25_0717 [QQYW]
45569
45480
-
Ser
GCT
[ENA]
¡û
>W1911721321
QQYX01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env24_0717 [QQYX]
309172
309083
-
Ser
GCT
[ENA]
¡û
>W1911721373
QQYY01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env23_0717 [QQYY]
309172
309083
-
Ser
GCT
[ENA]
¡û
>W1911721438
QQYZ01000026
Alphaproteobacteria
Sphingomonas koreensis SK-CDC1_0717 [QQYZ]
43502
43591
+
Ser
GCT
[ENA]
¡û
>W1911721459
QQZA01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env20_0617 [QQZA]
234418
234329
-
Ser
GCT
[ENA]
¡û
>W1911721504
QQZB01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env19_0617 [QQZB]
309172
309083
-
Ser
GCT
[ENA]
¡û
>W1911721567
QQZC01000014
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env22_0617 [QQZC]
37673
37584
-
Ser
GCT
[ENA]
¡û
>W1911721587
QQZD01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env21_0617 [QQZD]
309172
309083
-
Ser
GCT
[ENA]
¡û
>W1911721659
QQZE01000022
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env18_0517 [QQZE]
37627
37538
-
Ser
GCT
[ENA]
¡û
>W1911721692
QQZF01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env16_0517 [QQZF]
60542
60631
+
Ser
GCT
[ENA]
¡û
>W1911721713
QQZG01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env14_0417 [QQZG]
309172
309083
-
Ser
GCT
[ENA]
¡û
>W1911721803
QQZH01000020
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env13_0417 [QQZH]
37649
37560
-
Ser
GCT
[ENA]
¡û
>W1911721828
QQZI01000006
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env17_0517 [QQZI]
217573
217484
-
Ser
GCT
[ENA]
¡û
>W1810089123
PGEN01000001
Alphaproteobacteria
Sphingomonas koreensis JSS26 [PGEN]
2135920
2135831
-
Ser
GCT
[ENA]
¡û
>SRA1014396
SRR023845.120176
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
73
162
+
Ser
GCT
[SRA]
>SRA1014873
SRR023845.355142
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
175
264
+
Ser
GCT
[SRA]
>SRA1014887
SRR023845.364466
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
114
203
+
Ser
GCT
[SRA]
>SRA1015138
SRR023845.474520
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
53
142
+
Ser
GCT
[SRA]
>SRA1016077
SRR023846.338971
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
207
118
-
Ser
GCT
[SRA]
>W2010421500
FYAT01000012
Alphaproteobacteria
Sphingopyxis sp. P1IMeth2 [FYAT]
456215
456126
-
Ser
GCT
[ENA]
¡û
>W2010534584
JAAOZC010000006
Alphaproteobacteria
Sphingomonas vulcanisoli CECT 8804 [JAAOZC]
34976
34887
-
Ser
GCT
[ENA]
¡û
>W2011138002
NWUR01000001
Alphaproteobacteria
Sphingopyxis ummariensis DSM 24316 [NWUR]
356359
356270
-
Ser
GCT
[ENA]
¡û
>W2011269356
QLJC01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env8_1116 [QLJC]
24572
24661
+
Ser
GCT
[ENA]
¡û
>W2011269393
QLJD01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env4_1116 [QLJD]
60549
60638
+
Ser
GCT
[ENA]
¡û
>W2011269461
QLJE01000007
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env3_1116 [QLJE]
24582
24671
+
Ser
GCT
[ENA]
¡û
>W2011269482
QLJF01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env2_1116 [QLJF]
60547
60636
+
Ser
GCT
[ENA]
¡û
>W2011269561
QLJG01000015
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt6_1016 [QLJG]
37624
37535
-
Ser
GCT
[ENA]
¡û
>W2011269644
QLJI01000009
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt4_0816 [QLJI]
24575
24664
+
Ser
GCT
[ENA]
¡û
>W2011269682
QLJJ01000006
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt2_0716 [QLJJ]
24575
24664
+
Ser
GCT
[ENA]
¡û
>W2011286443
QQWJ01000001
Alphaproteobacteria
Sphingomonas koreensis KCTC 2883 [QQWJ]
385217
385306
+
Ser
GCT
[ENA]
¡û
>W2011286505
QQWK01000007
Alphaproteobacteria
Sphingomonas koreensis KCTC 2882 [QQWK]
98926
99015
+
Ser
GCT
[ENA]
¡û
>W2011286550
QQWL01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env11_0417 [QQWL]
219228
219139
-
Ser
GCT
[ENA]
¡û
>W2011286596
QQWM01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env15_0417 [QQWM]
85987
86076
+
Ser
GCT
[ENA]
¡û
>W2011286646
QQWN01000015
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env12_0417 [QQWN]
86993
87082
+
Ser
GCT
[ENA]
¡û
>W2011286681
QQWO01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env10_0317 [QQWO]
234515
234426
-
Ser
GCT
[ENA]
¡û
>W2011286735
QQWP01000008
Alphaproteobacteria
Sphingomonas koreensis SK-NY1_0417 [QQWP]
166621
166532
-
Ser
GCT
[ENA]
¡û
>W2011286773
QQWQ01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env9_0217 [QQWQ]
87143
87232
+
Ser
GCT
[ENA]
¡û
>W2011286841
QQWR01000021
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt10_0210 [QQWR]
24574
24663
+
Ser
GCT
[ENA]
¡û
>W2011286869
QQWS01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt9_0208 [QQWS]
86822
86911
+
Ser
GCT
[ENA]
¡û
>W2011286893
QQWT01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt8_0208 [QQWT]
42644
42733
+
Ser
GCT
[ENA]
¡û
>W2011286939
QQWU01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt7_0906 [QQWU]
87147
87236
+
Ser
GCT
[ENA]
¡û
>W2011287235
QQXA01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt14_0612 [QQXA]
24577
24666
+
Ser
GCT
[ENA]
¡û
>W2011287306
QQXB01000006
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt16_1112 [QQXB]
24629
24718
+
Ser
GCT
[ENA]
¡û
>W2011287345
QQXC01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt11_0411 [QQXC]
24575
24664
+
Ser
GCT
[ENA]
¡û
>W2011287408
QQXD01000028
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt12_0112 [QQXD]
24567
24656
+
Ser
GCT
[ENA]
¡û
>W2011287431
QQXE01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env5_1116 [QQXE]
60537
60626
+
Ser
GCT
[ENA]
¡û
>W2011287472
QQXF01000006
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env7_1116 [QQXF]
24572
24661
+
Ser
GCT
[ENA]
¡û
>W2011287517
QQXG01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env1_1016 [QQXG]
309075
308986
-
Ser
GCT
[ENA]
¡û
>W2011287818
QQXQ01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env56_1217 [QQXQ]
314371
314282
-
Ser
GCT
[ENA]
¡û
>W2011287863
QQXR01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env55_1217 [QQXR]
234515
234426
-
Ser
GCT
[ENA]
¡û
>W2011287910
QQXS01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env54_1217 [QQXS]
42645
42734
+
Ser
GCT
[ENA]
¡û
>W2011287957
QQXT01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env57_1217 [QQXT]
60549
60638
+
Ser
GCT
[ENA]
¡û
>W2011288004
QQXU01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env53_1017 [QQXU]
87087
87176
+
Ser
GCT
[ENA]
¡û
>W2011288054
QQXV01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env52_1017 [QQXV]
234515
234426
-
Ser
GCT
[ENA]
¡û
>W2011288099
QQXW01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env51_1017 [QQXW]
244730
244641
-
Ser
GCT
[ENA]
¡û
>W2011288144
QQXX01000006
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env50_1017 [QQXX]
234515
234426
-
Ser
GCT
[ENA]
¡û
>W2011288185
QQXY01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env47_1017 [QQXY]
24557
24646
+
Ser
GCT
[ENA]
¡û
>W2011288232
QQXZ01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env46_1017 [QQXZ]
234515
234426
-
Ser
GCT
[ENA]
¡û
>W2011288294
QQYA01000020
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env49_1017 [QQYA]
37618
37529
-
Ser
GCT
[ENA]
¡û
>W2011288319
QQYB01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env48_1017 [QQYB]
234515
234426
-
Ser
GCT
[ENA]
¡û
>W2011288365
QQYC01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env45_1017 [QQYC]
215736
215647
-
Ser
GCT
[ENA]
¡û
>W2011288427
QQYD01000021
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env44_0817 [QQYD]
45666
45577
-
Ser
GCT
[ENA]
¡û
>W2011288463
QQYE01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env43_0817 [QQYE]
234515
234426
-
Ser
GCT
[ENA]
¡û
>W2011288499
QQYF01000006
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env42_0817 [QQYF]
234515
234426
-
Ser
GCT
[ENA]
¡û
>W2011288543
QQYG01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env41_0817 [QQYG]
234515
234426
-
Ser
GCT
[ENA]
¡û
>W2011288584
QQYH01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env40_0817 [QQYH]
234515
234426
-
Ser
GCT
[ENA]
¡û
>W2011288630
QQYI01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env39_0817 [QQYI]
234515
234426
-
Ser
GCT
[ENA]
¡û
>W2011288682
QQYJ01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env36_0717 [QQYJ]
277937
277848
-
Ser
GCT
[ENA]
¡û
>W2011288728
QQYK01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env38_0817 [QQYK]
24597
24686
+
Ser
GCT
[ENA]
¡û
>W2011288770
QQYL01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env37_0717 [QQYL]
309172
309083
-
Ser
GCT
[ENA]
¡û
>W2011288816
QQYM01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env35_0717 [QQYM]
290393
290304
-
Ser
GCT
[ENA]
¡û
>W2011288858
QQYN01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env34_0717 [QQYN]
309172
309083
-
Ser
GCT
[ENA]
¡û
>W2011288928
QQYO01000021
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env33_0717 [QQYO]
37671
37582
-
Ser
GCT
[ENA]
¡û
>W2011288948
QQYP01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env32_0717 [QQYP]
309172
309083
-
Ser
GCT
[ENA]
¡û
>W2011288996
QQYQ01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env31_0717 [QQYQ]
309172
309083
-
Ser
GCT
[ENA]
¡û
>W2011289047
QQYR01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env30_0717 [QQYR]
309075
308986
-
Ser
GCT
[ENA]
¡û
>W2011289109
QQYS01000016
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env29_0717 [QQYS]
45666
45577
-
Ser
GCT
[ENA]
¡û
>W2011289141
QQYT01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env28_0717 [QQYT]
290393
290304
-
Ser
GCT
[ENA]
¡û
>W2011289202
QQYU01000014
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env27_0717 [QQYU]
45569
45480
-
Ser
GCT
[ENA]
¡û
>W2011289221
QQYV01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env26_0717 [QQYV]
309172
309083
-
Ser
GCT
[ENA]
¡û
>W2011289291
QQYW01000018
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env25_0717 [QQYW]
45569
45480
-
Ser
GCT
[ENA]
¡û
>W2011289311
QQYX01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env24_0717 [QQYX]
309172
309083
-
Ser
GCT
[ENA]
¡û
>W2011289363
QQYY01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env23_0717 [QQYY]
309172
309083
-
Ser
GCT
[ENA]
¡û
>W2011289428
QQYZ01000026
Alphaproteobacteria
Sphingomonas koreensis SK-CDC1_0717 [QQYZ]
43502
43591
+
Ser
GCT
[ENA]
¡û
>W2011289449
QQZA01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env20_0617 [QQZA]
234418
234329
-
Ser
GCT
[ENA]
¡û
>W2011289494
QQZB01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env19_0617 [QQZB]
309172
309083
-
Ser
GCT
[ENA]
¡û
>W2011289557
QQZC01000014
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env22_0617 [QQZC]
37673
37584
-
Ser
GCT
[ENA]
¡û
>W2011289577
QQZD01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env21_0617 [QQZD]
309172
309083
-
Ser
GCT
[ENA]
¡û
>W2011289649
QQZE01000022
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env18_0517 [QQZE]
37627
37538
-
Ser
GCT
[ENA]
¡û
>W2011289682
QQZF01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env16_0517 [QQZF]
60542
60631
+
Ser
GCT
[ENA]
¡û
>W2011289703
QQZG01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env14_0417 [QQZG]
309172
309083
-
Ser
GCT
[ENA]
¡û
>W2011289793
QQZH01000020
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env13_0417 [QQZH]
37649
37560
-
Ser
GCT
[ENA]
¡û
>W2011289818
QQZI01000006
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env17_0517 [QQZI]
217573
217484
-
Ser
GCT
[ENA]
¡û
>W2011539278
SCNQ01000008
Alphaproteobacteria
Sphingomonadaceae bacterium 3R27B10 [SCNQ]
10765
10854
+
Ser
GCT
[ENA]
¡û
>W2011539430
SCNT01000010
Alphaproteobacteria
Sphingomonadaceae bacterium 3R27E2-A [SCNT]
57309
57220
-
Ser
GCT
[ENA]
¡û
>W2110290605
JACYUG010000004
Alphaproteobacteria
Sphingomonas sp. CFBP 8760 CFBP8760 [JACYUG]
212894
212983
+
Ser
GCT
[ENA]
¡û
>C201107498
CP042239
Alphaproteobacteria
Sphingomonas sp. XS-10 [CP042239]
3000759
3000670
-
Ser
GCT
-
¡û
>W2110694478
JAIQXT010000004
Alphaproteobacteria
Sphingomonas sp. R647 [JAIQXT]
119978
119889
-
Ser
GCT
[ENA]
¡û
>C211082737
CP050249
Alphaproteobacteria
Sphingopyxis terrae subsp. terrae YC-JH3 [CP050249]
2135895
2135806
-
Ser
GCT
-
¡û
>C231364365
CP095845
Alphaproteobacteria
Sphingopyxis sp. GC21 [CP095845]
1883423
1883334
-
Ser
GCT
-
¡û
>C231565287
CP115174
Alphaproteobacteria
Sphingomonas sp. PAMB00755 [CP115174]
4123653
4123564
-
Ser
GCT
-
¡û
>C231595868
CP117411
Alphaproteobacteria
Sphingomonas naphthae KACC 18716 [CP117411]
2283208
2283297
+
Ser
GCT
-
¡û
>C161055619
CP013342
Alphaproteobacteria
Sphingopyxis terrae subsp. terrae NBRC 15098 203-1 [CP013342]
3584609
3584520
-
Ser
GCT
[Ensembl]
¡û
>W1610076627
BCYW01000029
Alphaproteobacteria
Sphingomonas koreensis NBRC 16723 [BCYW]
1914
2003
+
Ser
GCT
[ENA]
¡û
>W1610077672
BCZQ01000005
Alphaproteobacteria
Sphingopyxis terrae NBRC 15098 [BCZQ]
41356
41267
-
Ser
GCT
[ENA]
¡û
>W121031744
AHHA01000011
Alphaproteobacteria
Sphingomonas sp. PAMC 26617 [AHHA]
47989
47900
-
Ser
GCT
[ENA]
¡û
>W1610771342
LNSB01000040
Alphaproteobacteria
Sphingopyxis sp. HIX [LNSB]
37438
37349
-
Ser
GCT
[ENA]
¡û
>W1610771378
LNSC01000037
Alphaproteobacteria
Sphingopyxis sp. HXXIV [LNSC]
10645
10734
+
Ser
GCT
[ENA]
¡û
>W1610771723
LNSK01000002
Alphaproteobacteria
Sphingopyxis sp. A083 [LNSK]
169212
169301
+
Ser
GCT
[ENA]
¡û
>W1610913407
LSJF01000192
Alphaproteobacteria
Sphingomonas sp. CCH9-H8 [LSJF]
6110
6199
+
Ser
GCT
[ENA]
¡û
>W1610913716
LSJM01000416
Alphaproteobacteria
Sphingomonas sp. CCH9-E2 [LSJM]
6819
6908
+
Ser
GCT
[ENA]
¡û
>W1610938954
LURA01000007
Alphaproteobacteria
Sphingopyxis sp. REDSEA-S22_B5 [LURA]
76224
76135
-
Ser
GCT
[ENA]
¡û
>W1610939013
LURB01000072
Alphaproteobacteria
Sphingopyxis sp. REDSEA-S23_B6 [LURB]
36523
36612
+
Ser
GCT
[ENA]
¡û
>W1610939069
LURE01000020
Alphaproteobacteria
Sphingopyxis sp. REDSEA-S29_B3 [LURE]
106730
106641
-
Ser
GCT
[ENA]
¡û
>W1610939177
LURI01000004
Alphaproteobacteria
Sphingopyxis sp. REDSEA-S42_B3 [LURI]
1320247
1320158
-
Ser
GCT
[ENA]
¡û
>W1710074316
BCYW01000029
Alphaproteobacteria
Sphingomonas koreensis NBRC 16723 [BCYW]
1914
2003
+
Ser
GCT
[ENA]
¡û
>W1710075310
BCZQ01000005
Alphaproteobacteria
Sphingopyxis terrae NBRC 15098 [BCZQ]
41356
41267
-
Ser
GCT
[ENA]
¡û
>W1710609428
FXWL01000001
Alphaproteobacteria
Sphingopyxis terrae ummariensis [FXWL]
356775
356686
-
Ser
GCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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