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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.275828 (15 seq.)
>W1610550409
JXMS01000002
Thermodesulfobacteriota
Halodesulfovibrio spirochaetisodalis [JXMS]
129141
129218
+
Glu
TTC
[ENA]
¡û
>W1610550411
JXMS01000002
Thermodesulfobacteriota
Halodesulfovibrio spirochaetisodalis [JXMS]
167585
167662
+
Glu
TTC
[ENA]
¡û
>W1610550432
JXMS01000005
Thermodesulfobacteriota
Halodesulfovibrio spirochaetisodalis [JXMS]
151815
151738
-
Glu
TTC
[ENA]
¡û
>W1610550434
JXMS01000005
Thermodesulfobacteriota
Halodesulfovibrio spirochaetisodalis [JXMS]
65269
65192
-
Glu
TTC
[ENA]
¡û
>W1610550480
JXMS01000020
Thermodesulfobacteriota
Halodesulfovibrio spirochaetisodalis [JXMS]
45719
45642
-
Glu
TTC
[ENA]
¡û
>W1710594466
FSRG01000004
Thermodesulfobacteriota
Halodesulfovibrio marinisediminis DSM 17456 [FSRG]
643773
643850
+
Glu
TTC
[ENA]
¡û
>W1710594474
FSRG01000005
Thermodesulfobacteriota
Halodesulfovibrio marinisediminis DSM 17456 [FSRG]
111197
111274
+
Glu
TTC
[ENA]
¡û
>W1710594476
FSRG01000005
Thermodesulfobacteriota
Halodesulfovibrio marinisediminis DSM 17456 [FSRG]
176648
176725
+
Glu
TTC
[ENA]
¡û
>W1710594477
FSRG01000005
Thermodesulfobacteriota
Halodesulfovibrio marinisediminis DSM 17456 [FSRG]
250559
250636
+
Glu
TTC
[ENA]
¡û
>W1710594479
FSRG01000005
Thermodesulfobacteriota
Halodesulfovibrio marinisediminis DSM 17456 [FSRG]
306334
306411
+
Glu
TTC
[ENA]
¡û
>W1710660134
JXMS01000002
Thermodesulfobacteriota
Halodesulfovibrio spirochaetisodalis [JXMS]
129141
129218
+
Glu
TTC
[ENA]
¡û
>W1710660136
JXMS01000002
Thermodesulfobacteriota
Halodesulfovibrio spirochaetisodalis [JXMS]
167585
167662
+
Glu
TTC
[ENA]
¡û
>W1710660157
JXMS01000005
Thermodesulfobacteriota
Halodesulfovibrio spirochaetisodalis [JXMS]
151815
151738
-
Glu
TTC
[ENA]
¡û
>W1710660159
JXMS01000005
Thermodesulfobacteriota
Halodesulfovibrio spirochaetisodalis [JXMS]
65269
65192
-
Glu
TTC
[ENA]
¡û
>W1710660205
JXMS01000020
Thermodesulfobacteriota
Halodesulfovibrio spirochaetisodalis [JXMS]
45719
45642
-
Glu
TTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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