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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.27939 (221 seq.)
>W1710785195
LJHQ01000059
Alphaproteobacteria
Bosea sp. AAP35 [LJHQ]
22655
22566
-
Ser
GGA
[ENA]
¡û
>W1711120269
LUFU01000008
Alphaproteobacteria
Ensifer aridi [LUFU]
54055
54144
+
Ser
GGA
[ENA]
¡û
>W1711120367
LUFW01000012
Alphaproteobacteria
Ensifer aridi [LUFW]
53750
53839
+
Ser
GGA
[ENA]
¡û
>W1711337982
MBSR01000062
Alphaproteobacteria
Ensifer sp. LC54 [MBSR]
96993
97082
+
Ser
GGA
[ENA]
¡û
>W1711350368
MCRJ01000007
Alphaproteobacteria
Methylobrevis pamukkalensis [MCRJ]
2426
2515
+
Ser
GGA
[ENA]
¡û
>W1711510417
MLAX01000001
Alphaproteobacteria
Alphaproteobacteria bacterium AO1-B [MLAX]
434195
434106
-
Ser
GGA
[ENA]
¡û
>W1711679648
MRVD01000017
Alphaproteobacteria
Ensifer adhaerens [MRVD]
6557
6468
-
Ser
GGA
[ENA]
¡û
>C171019631
CP013051
Alphaproteobacteria
Sinorhizobium americanum CCGM7 [CP013051]
202642
202731
+
Ser
GGA
-
¡û
>C171020975
CP013107
Alphaproteobacteria
Sinorhizobium americanum CFNEI 73 [CP013107]
202449
202538
+
Ser
GGA
-
¡û
>C171072673
CP018095
Alphaproteobacteria
Chelatococcus daeguensis TAD1 [CP018095]
3066307
3066396
+
Ser
GGA
-
¡û
>C171123550
CP021808
Alphaproteobacteria
Sinorhizobium meliloti Rm41 [CP021808]
2659847
2659936
+
Ser
GGA
-
¡û
>W131213964
ATTK01000070
Alphaproteobacteria
Sinorhizobium meliloti MVII-I [ATTK]
7208
7297
+
Ser
GGA
[ENA]
¡û
>W131213986
ATTL01000008
Alphaproteobacteria
Sinorhizobium medicae DI28 [ATTL]
106559
106470
-
Ser
GGA
[ENA]
¡û
>W131214267
ATTR01000010
Alphaproteobacteria
Sinorhizobium medicae WSM244 [ATTR]
107050
106961
-
Ser
GGA
[ENA]
¡û
>W131218857
ATYB01000014
Alphaproteobacteria
Sinorhizobium arboris LMG 14919 [ATYB]
3526688
3526777
+
Ser
GGA
[ENA]
¡û
>W131218909
ATYC01000022
Alphaproteobacteria
Sinorhizobium medicae WSM4191 [ATYC]
3573556
3573645
+
Ser
GGA
[ENA]
¡û
>W131218280
ATXN01000006
Alphaproteobacteria
Brevundimonas naejangsanensis DSM 23858 [ATXN]
109750
109839
+
Ser
GGA
[ENA]
¡û
>w026459
ABAY01000013
Alphaproteobacteria
Methylobacterium sp. 4-46 [ABAY]
48515
48424
-
Ser
GGA
[ENA]
¡û
>w020433
AAUW01000006
Alphaproteobacteria
Roseibium aggregatum IAM 12614 [AAUW]
116045
115954
-
Ser
GGA
[ENA]
¡û
>WENV180014132
FPIC01062819
[FPIC] soil metagenome; Soil
91
2
-
Ser
GGA
[ENA]
¡û
>W141042993
AMFA01000019
Alphaproteobacteria
Brevundimonas diminuta 470-4 [AMFA]
14319
14230
-
Ser
GGA
[ENA]
¡û
>WENV181308378
OFIS01008746
[OFIS] sludge metagenome; sludge
65
154
+
Ser
GGA
[ENA]
¡û
>WENV181311126
OFJB01000043
[OFJB] sludge metagenome; sludge
85261
85172
-
Ser
GGA
[ENA]
¡û
>WENV181402426
OFTY01001415
[OFTY] sludge metagenome; sludge
10429
10518
+
Ser
GGA
[ENA]
¡û
>W08006135
ABIP01000006
Alphaproteobacteria
Methylobacterium nodulans ORS 2060 [ABIP]
8414
8503
+
Ser
GGA
[ENA]
¡û
>W141180652
AYGY02000004
Alphaproteobacteria
Martelella sp. AD-3 [AYGY]
30325
30414
+
Ser
GGA
[ENA]
¡û
>W141200770
AYYG01000029
Alphaproteobacteria
Labrenzia sp. DG1229 [AYYG]
26989
27078
+
Ser
GGA
[ENA]
¡û
>W141207564
AZNW01000066
Alphaproteobacteria
Sinorhizobium meliloti WSM1022 [AZNW]
27919
27830
-
Ser
GGA
[ENA]
¡û
>WENV183738939
PJUE01000542
[PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment
10108
10019
-
Ser
GGA
[ENA]
¡û
>WENV170176978
CEOS01143546
[CEOS] marine metagenome genome assembly TARA_056_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
565
654
+
Ser
GGA
[ENA]
¡û
>WENV170657334
JTFO01127270
[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
742
653
-
Ser
GGA
[ENA]
¡û
>WENV170904328
MDTE01010793
[MDTE] marine metagenome; seawater
4659
4748
+
Ser
GGA
[ENA]
¡û
>WENV170962262
MRWF01010644
[MRWF] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell
137713
137624
-
Ser
GGA
[ENA]
¡û
>WENV170963984
MRWG01001738
[MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell
12681
12770
+
Ser
GGA
[ENA]
¡û
>WENV171003185
NNBT01002195
[NNBT] plant metagenome; symbiotic tissue sample KVJ10
344
255
-
Ser
GGA
[ENA]
¡û
>C181067721
CP022529
Alphaproteobacteria
Labrenzia sp. VG12 [CP022529]
5161262
5161173
-
Ser
GGA
-
¡û
>C181099182
CP024307
Alphaproteobacteria
Sinorhizobium fredii NXT3 [CP024307]
211994
212083
+
Ser
GGA
-
¡û
>C191005663
AP018828
Alphaproteobacteria
Asticcacaulis excentricus M6 [AP018827, AP018828]
312645
312556
-
Ser
GGA
-
¡û
>C191087715
CP032312
Alphaproteobacteria
Pannonibacter phragmitetus BB [CP032312]
630204
630115
-
Ser
GGA
-
¡û
>C191093985
CP032707
Alphaproteobacteria
Brevundimonas naejangsanensis BRV3 [CP032707]
493740
493829
+
Ser
GGA
-
¡û
>W09106107
AATG01000001
Alphaproteobacteria
Sinorhizobium medicae WSM419 [AATG]
157066
157155
+
Ser
GGA
[ENA]
¡û
>C191134455
CP035093
Alphaproteobacteria
Brevundimonas diminuta [CP035093]
1472175
1472086
-
Ser
GGA
-
¡û
>C191188376
CP041191
Alphaproteobacteria
Labrenzia sp. PHM005 [CP041191]
177023
177112
+
Ser
GGA
-
¡û
>W09118280
ACCU01000016
Alphaproteobacteria
Roseibium alexandrii DFL-11 [ACCU]
22868
22779
-
Ser
GGA
[ENA]
¡û
>C191220429
LR588407
Alphaproteobacteria
Brevundimonas vancanneytii NCTC9239 [LR588407]
2449586
2449675
+
Ser
GGA
-
¡û
>W09133893
ACQR01000080
Alphaproteobacteria
Asticcacaulis excentricus CB 48 [ACQR]
3889
3800
-
Ser
GGA
[ENA]
¡û
>W141551938
JHOF01000023
Alphaproteobacteria
Brevundimonas naejangsanensis [JHOF]
36581
36670
+
Ser
GGA
[ENA]
¡û
>W1910285134
FREW01000002
Alphaproteobacteria
Labrenzia sp. Alg231-36 [FREW]
756940
756851
-
Ser
GGA
[ENA]
¡û
>W1910374337
FUIE01000057
Alphaproteobacteria
Brevundimonas diminuta 3F5N [FUIE]
102827
102916
+
Ser
GGA
[ENA]
¡û
>W1910501563
FYAP01000006
Alphaproteobacteria
Pannonibacter sp. CS1GBFMT1 [FYAP]
351245
351334
+
Ser
GGA
[ENA]
¡û
>W1911532398
OGUZ01000014
Alphaproteobacteria
Labrenzia sp. EL143 [OGUZ]
81251
81162
-
Ser
GGA
[ENA]
¡û
>W1911760361
QWTZ01000014
Alphaproteobacteria
Brevundimonas sp. LPMIX5 [QWTZ]
52555
52466
-
Ser
GGA
[ENA]
¡û
>W1810365585
PVUG01000009
Alphaproteobacteria
Martelella mediterranea USBA-857 [PVUG]
114691
114602
-
Ser
GGA
[ENA]
¡û
>W1810503525
QBKE01000009
Alphaproteobacteria
Asticcacaulis sp. CF398 [QBKE]
21598
21687
+
Ser
GGA
[ENA]
¡û
>W1810532673
QCYM01000020
Alphaproteobacteria
Labrenzia sp. 011 [QCYM]
3112
3023
-
Ser
GGA
[ENA]
¡û
>C151098054
FO082820
Alphaproteobacteria
Pseudorhizobium banfieldiae NT-26 [FO082820]
4105752
4105663
-
Ser
GGA
[Ensembl]
¡û
>W2010169567
CABFWF010000008
Alphaproteobacteria
Rhizobium endolithicum JC140 [CABFWF]
487
398
-
Ser
GGA
[ENA]
¡û
>W2010215051
CABHNZ010000007
Alphaproteobacteria
Shinella sp. UYSO24 [CABHNZ]
135206
135117
-
Ser
GGA
[ENA]
¡û
>W2010395397
FREW01000002
Alphaproteobacteria
Labrenzia sp. Alg231-36 [FREW]
756940
756851
-
Ser
GGA
[ENA]
¡û
>W2010402165
FUIE01000057
Alphaproteobacteria
Brevundimonas diminuta 3F5N [FUIE]
102827
102916
+
Ser
GGA
[ENA]
¡û
>W2010421295
FYAP01000006
Alphaproteobacteria
Pannonibacter sp. CS1GBFMT1 [FYAP]
351245
351334
+
Ser
GGA
[ENA]
¡û
>W2010442158
JAABLP010000003
Alphaproteobacteria
Pannonibacter sp. XCT-34 [JAABLP]
689483
689572
+
Ser
GGA
[ENA]
¡û
>W2010636403
JABUOU010000003
Alphaproteobacteria
Martelella limonii NBRC 109441 [JABUOU]
6689
6600
-
Ser
GGA
[ENA]
¡û
>W2010698538
JACHEJ010000005
Alphaproteobacteria
Rhizobium flavum DSM 102134 [JACHEJ]
221059
220970
-
Ser
GGA
[ENA]
¡û
>W2010725260
JACIDZ010000009
Alphaproteobacteria
Martelella radicis DSM 28101 [JACIDZ]
206718
206807
+
Ser
GGA
[ENA]
¡û
>W2010783808
LODU01000047
Alphaproteobacteria
Sinorhizobium americanum FG01 [LODU]
62470
62559
+
Ser
GGA
[ENA]
¡û
>W2010804823
MBFK01000061
Alphaproteobacteria
Ensifer sp. CCBAU 251167 [MBFK]
216787
216698
-
Ser
GGA
[ENA]
¡û
>W2010935231
NBUD01000009
Alphaproteobacteria
Sinorhizobium medicae Str15 [NBUD]
41731
41820
+
Ser
GGA
[ENA]
¡û
>W2010935373
NBUF01000203
Alphaproteobacteria
Sinorhizobium medicae Str13 [NBUF]
133679
133768
+
Ser
GGA
[ENA]
¡û
>W2010935394
NBUG01000079
Alphaproteobacteria
Sinorhizobium medicae Str12 [NBUG]
12151
12062
-
Ser
GGA
[ENA]
¡û
>W2010935743
NBUO01000106
Alphaproteobacteria
Sinorhizobium medicae Str4 [NBUO]
13155
13066
-
Ser
GGA
[ENA]
¡û
>W2010956571
NEXT01000002
Alphaproteobacteria
Sinorhizobium sp. LM21 [NEXT]
98396
98485
+
Ser
GGA
[ENA]
¡û
>W2011136471
NWTB01000005
Alphaproteobacteria
Sinorhizobium sp. FG01 [NWTB]
62470
62559
+
Ser
GGA
[ENA]
¡û
>W2011138798
NWVT01000007
Alphaproteobacteria
Ensifer sp. T2_8 [NWVT]
114277
114188
-
Ser
GGA
[ENA]
¡û
>W2011165157
OGUZ01000014
Alphaproteobacteria
Labrenzia sp. EL143 [OGUZ]
81251
81162
-
Ser
GGA
[ENA]
¡û
>W2011208135
POVM01000013
Alphaproteobacteria
Sinorhizobium meliloti 320 [POVM]
104193
104282
+
Ser
GGA
[ENA]
¡û
>W2011323453
QWTZ01000014
Alphaproteobacteria
Brevundimonas sp. LPMIX5 [QWTZ]
52555
52466
-
Ser
GGA
[ENA]
¡û
>W2011325116
QXES01000002
Alphaproteobacteria
Pannonibacter phragmitetus H1-4 [QXES]
182757
182668
-
Ser
GGA
[ENA]
¡û
>W2011410902
RDQX01000003
Alphaproteobacteria
Sinorhizobium meliloti AK170 [RDQX]
194968
195057
+
Ser
GGA
[ENA]
¡û
>W2011428004
RHWX01000023
Alphaproteobacteria
Brevundimonas sp. 357 [RHWX]
11467
11556
+
Ser
GGA
[ENA]
¡û
>W2011462737
RPHM01000029
Alphaproteobacteria
Sinorhizobium meliloti USDA1819 [RPHM]
61120
61209
+
Ser
GGA
[ENA]
¡û
>W2011462862
RPHO01000150
Alphaproteobacteria
Sinorhizobium meliloti USDA1808 [RPHO]
5786
5875
+
Ser
GGA
[ENA]
¡û
>W2011463107
RPHT01000028
Alphaproteobacteria
Sinorhizobium meliloti USDA1794 [RPHT]
10362
10273
-
Ser
GGA
[ENA]
¡û
>W2011463552
RPIC01000036
Alphaproteobacteria
Sinorhizobium meliloti USDA1767 [RPIC]
56696
56607
-
Ser
GGA
[ENA]
¡û
>W2011463966
RPIK01000067
Alphaproteobacteria
Sinorhizobium meliloti USDA1710 [RPIK]
22744
22655
-
Ser
GGA
[ENA]
¡û
>W2011464008
RPIL01000041
Alphaproteobacteria
Sinorhizobium meliloti USDA1708 [RPIL]
18069
18158
+
Ser
GGA
[ENA]
¡û
>W2011464223
RPIP01000139
Alphaproteobacteria
Sinorhizobium meliloti USDA1700 [RPIP]
4896
4807
-
Ser
GGA
[ENA]
¡û
>W2011464240
RPIQ01000024
Alphaproteobacteria
Sinorhizobium meliloti USDA1699 [RPIQ]
56702
56613
-
Ser
GGA
[ENA]
¡û
>W2011464305
RPIR01000052
Alphaproteobacteria
Sinorhizobium meliloti USDA1696 [RPIR]
7204
7293
+
Ser
GGA
[ENA]
¡û
>W2011464429
RPIU01000012
Alphaproteobacteria
Sinorhizobium meliloti USDA1692 [RPIU]
4994
4905
-
Ser
GGA
[ENA]
¡û
>W2011464899
RPJD01000140
Alphaproteobacteria
Sinorhizobium meliloti USDA1660 [RPJD]
7163
7252
+
Ser
GGA
[ENA]
¡û
>W2011465262
RPJL01000002
Alphaproteobacteria
Sinorhizobium medicae USDA1631 [RPJL]
121315
121404
+
Ser
GGA
[ENA]
¡û
>W2011465502
RPJQ01000005
Alphaproteobacteria
Sinorhizobium meliloti USDA1623 [RPJQ]
56677
56588
-
Ser
GGA
[ENA]
¡û
>W2011465789
RPJV01000042
Alphaproteobacteria
Sinorhizobium meliloti USDA1612 [RPJV]
4896
4807
-
Ser
GGA
[ENA]
¡û
>W2011466160
RPKD01000015
Alphaproteobacteria
Sinorhizobium meliloti USDA1591 [RPKD]
68835
68924
+
Ser
GGA
[ENA]
¡û
>W2011466193
RPKE01000001
Alphaproteobacteria
Sinorhizobium meliloti USDA1590 [RPKE]
183941
184030
+
Ser
GGA
[ENA]
¡û
>W2011466408
RPKI01000039
Alphaproteobacteria
Sinorhizobium meliloti USDA1580 [RPKI]
5769
5858
+
Ser
GGA
[ENA]
¡û
>W2011467107
RPKW01000054
Alphaproteobacteria
Sinorhizobium meliloti USDA1496 [RPKW]
7077
7166
+
Ser
GGA
[ENA]
¡û
>W2011467377
RPLB01000085
Alphaproteobacteria
Sinorhizobium meliloti USDA1462 [RPLB]
16694
16605
-
Ser
GGA
[ENA]
¡û
>W2011467569
RPLF01000038
Alphaproteobacteria
Sinorhizobium meliloti USDA1397 [RPLF]
7204
7293
+
Ser
GGA
[ENA]
¡û
>W2011467660
RPLH01000030
Alphaproteobacteria
Sinorhizobium meliloti USDA1379 [RPLH]
56698
56609
-
Ser
GGA
[ENA]
¡û
>W2011467863
RPLL01000017
Alphaproteobacteria
Sinorhizobium meliloti USDA1325 [RPLL]
21640
21551
-
Ser
GGA
[ENA]
¡û
>W2011467913
RPLM01000026
Alphaproteobacteria
Sinorhizobium meliloti USDA1320 [RPLM]
66685
66596
-
Ser
GGA
[ENA]
¡û
>W2011468314
RPLU01000094
Alphaproteobacteria
Sinorhizobium meliloti USDA1235 [RPLU]
18221
18132
-
Ser
GGA
[ENA]
¡û
>W2011468377
RPLV01000138
Alphaproteobacteria
Sinorhizobium meliloti USDA1232 [RPLV]
10362
10273
-
Ser
GGA
[ENA]
¡û
>W2011468497
RPLY01000023
Alphaproteobacteria
Sinorhizobium meliloti USDA1222 [RPLY]
56678
56589
-
Ser
GGA
[ENA]
¡û
>W2011468546
RPLZ01000034
Alphaproteobacteria
Sinorhizobium meliloti USDA1221 [RPLZ]
4893
4804
-
Ser
GGA
[ENA]
¡û
>W2011468868
RPMF01000091
Alphaproteobacteria
Sinorhizobium meliloti USDA1210 [RPMF]
10351
10262
-
Ser
GGA
[ENA]
¡û
>W2011469038
RPMJ01000005
Alphaproteobacteria
Sinorhizobium meliloti USDA1204 [RPMJ]
65105
65194
+
Ser
GGA
[ENA]
¡û
>W2011469362
RPMP01000018
Alphaproteobacteria
Sinorhizobium meliloti USDA1195 [RPMP]
48563
48474
-
Ser
GGA
[ENA]
¡û
>W2011469451
RPMR01000020
Alphaproteobacteria
Sinorhizobium meliloti USDA1187 [RPMR]
60539
60628
+
Ser
GGA
[ENA]
¡û
>W2011469512
RPMS01000031
Alphaproteobacteria
Sinorhizobium meliloti USDA1186 [RPMS]
17916
18005
+
Ser
GGA
[ENA]
¡û
>W2011469723
RPMW01000039
Alphaproteobacteria
Sinorhizobium meliloti USDA1171 [RPMW]
41746
41657
-
Ser
GGA
[ENA]
¡û
>W2011469767
RPMX01000033
Alphaproteobacteria
Sinorhizobium meliloti USDA1170 [RPMX]
78958
78869
-
Ser
GGA
[ENA]
¡û
>W2011469904
RPNA01000012
Alphaproteobacteria
Sinorhizobium meliloti USDA1162 [RPNA]
68801
68890
+
Ser
GGA
[ENA]
¡û
>W2011470205
RPNG01000019
Alphaproteobacteria
Sinorhizobium meliloti USDA1107 [RPNG]
56685
56596
-
Ser
GGA
[ENA]
¡û
>W2011470598
RPNO01000016
Alphaproteobacteria
Sinorhizobium meliloti USDA1022 [RPNO]
56696
56607
-
Ser
GGA
[ENA]
¡û
>W2011470658
RPNP01000017
Alphaproteobacteria
Sinorhizobium meliloti USDA1018 [RPNP]
73562
73473
-
Ser
GGA
[ENA]
¡û
>W2011470815
RPNS01000028
Alphaproteobacteria
Sinorhizobium meliloti USDA1006 [RPNS]
44358
44447
+
Ser
GGA
[ENA]
¡û
>W2011470968
RPNV01000031
Alphaproteobacteria
Sinorhizobium meliloti 3085 [RPNV]
7123
7212
+
Ser
GGA
[ENA]
¡û
>W2011481519
RQWJ01000005
Alphaproteobacteria
Brevundimonas sp. LA-55 [RQWJ]
128917
129006
+
Ser
GGA
[ENA]
¡û
>W2011627756
SMAR01000007
Alphaproteobacteria
Martelella mediterranea 175.2 [SMAR]
116020
116109
+
Ser
GGA
[ENA]
¡û
>W2011637702
SMLY01000056
Alphaproteobacteria
Roseibium hamelinense NBRC 16783 [SMLY]
35545
35634
+
Ser
GGA
[ENA]
¡û
>W2011637753
SMLZ01000098
Alphaproteobacteria
Roseibium denhamense JCM 10543 [SMLZ]
78583
78672
+
Ser
GGA
[ENA]
¡û
>W2011638061
SMMF01000942
Alphaproteobacteria
Roseibium sp. RKSG952 [SMMF]
50759
50670
-
Ser
GGA
[ENA]
¡û
>W2011655818
SOCB01000013
Alphaproteobacteria
Labrenzia sp. PT13C1 [SOCB]
765033
765122
+
Ser
GGA
[ENA]
¡û
>W2011694288
STFY01000008
Alphaproteobacteria
Mesorhizobium sp. GR13 [STFY]
214662
214751
+
Ser
GGA
[ENA]
¡û
>W2011758658
UAQN01000007
Alphaproteobacteria
Brevundimonas diminuta NCTC11164 [UAQN]
485590
485679
+
Ser
GGA
[ENA]
¡û
>W2011834477
UGSK01000001
Alphaproteobacteria
Pannonibacter phragmitetus NCTC13350 [UGSK]
498301
498212
-
Ser
GGA
[ENA]
¡û
>W2011850274
UIGE01000001
Alphaproteobacteria
Brevundimonas diminuta NCTC8545 [UIGE]
2462167
2462256
+
Ser
GGA
[ENA]
¡û
>W2011976141
VCLB01000003
Alphaproteobacteria
Martelella sp. GH2-6 [VCLB]
65664
65575
-
Ser
GGA
[ENA]
¡û
>W2012082517
VLLF01000011
Alphaproteobacteria
Roseibium hamelinense ATCC BAA-252 [VLLF]
5963
5874
-
Ser
GGA
[ENA]
¡û
>W2012205365
VXDB01000013
Alphaproteobacteria
Roseibium sediminis KCTC 52373 [VXDB]
147598
147687
+
Ser
GGA
[ENA]
¡û
>W2110050577
BMZO01000003
Alphaproteobacteria
Limoniibacter endophyticus KCTC 42097 [BMZO]
71707
71796
+
Ser
GGA
[ENA]
¡û
>W2110260940
JACSQU010000002
Alphaproteobacteria
Brevundimonas sp. Sa3CVA3 [JACSQU]
504741
504652
-
Ser
GGA
[ENA]
¡û
>W2110363069
JADOUI010000009
Alphaproteobacteria
Labrenzia sp. EL_132 [JADOUI]
121332
121421
+
Ser
GGA
[ENA]
¡û
>W2110363117
JADOUJ010000010
Alphaproteobacteria
Labrenzia sp. EL_142 [JADOUJ]
28284
28195
-
Ser
GGA
[ENA]
¡û
>W2110363142
JADOUK010000001
Alphaproteobacteria
Labrenzia sp. EL_162 [JADOUK]
741746
741657
-
Ser
GGA
[ENA]
¡û
>W2110363193
JADOUL010000002
Alphaproteobacteria
Labrenzia sp. EL_195 [JADOUL]
421330
421241
-
Ser
GGA
[ENA]
¡û
>W2110363290
JADOUN010000015
Alphaproteobacteria
Labrenzia sp. EL_126 [JADOUN]
17803
17892
+
Ser
GGA
[ENA]
¡û
>W2110363311
JADOUO010000001
Alphaproteobacteria
Labrenzia sp. EL_159 [JADOUO]
805839
805928
+
Ser
GGA
[ENA]
¡û
>W2110363382
JADOUP010000010
Alphaproteobacteria
Labrenzia sp. EL_208 [JADOUP]
143980
143891
-
Ser
GGA
[ENA]
¡û
>W2110363403
JADOUQ010000001
Alphaproteobacteria
Labrenzia sp. EL_13 [JADOUQ]
779109
779198
+
Ser
GGA
[ENA]
¡û
>W2110395814
JADYVD010000057
Alphaproteobacteria
Ensifer sp. IC4062 [JADYVD]
227
138
-
Ser
GGA
[ENA]
¡û
>W2110396987
JADYWC010000005
Alphaproteobacteria
Ensifer sp. BRP08 [JADYWC]
319303
319214
-
Ser
GGA
[ENA]
¡û
>W2110423360
JAEKJS010000001
Alphaproteobacteria
Roseibium aggregatum SN13-21 [JAEKJS]
835
746
-
Ser
GGA
[ENA]
¡û
>W2110423747
JAEKJZ010000001
Alphaproteobacteria
Roseibium aggregatum SY-2-12 [JAEKJZ]
85014
84925
-
Ser
GGA
[ENA]
¡û
>W2110434305
JAENJM010000012
Alphaproteobacteria
Brevundimonas diminuta IR18 [JAENJM]
30378
30289
-
Ser
GGA
[ENA]
¡û
>W2110434331
JAENJN010000003
Alphaproteobacteria
Brevundimonas diminuta IR165 [JAENJN]
80726
80637
-
Ser
GGA
[ENA]
¡û
>W2110524169
JAGEPO010000001
Alphaproteobacteria
Sinorhizobium medicae T10 [JAGEPO]
1929151
1929062
-
Ser
GGA
[ENA]
¡û
>W2110534883
JAGFPK010000001
Alphaproteobacteria
Ciceribacter sp. L1K22 [JAGFPK]
506780
506691
-
Ser
GGA
[ENA]
¡û
>W2110548127
JAGHRI010000001
Alphaproteobacteria
Labrenzia sp. R4_1 [JAGHRI]
449586
449497
-
Ser
GGA
[ENA]
¡û
>W2110548191
JAGHRJ010000003
Alphaproteobacteria
Labrenzia sp. R4_2 [JAGHRJ]
300860
300771
-
Ser
GGA
[ENA]
¡û
>W2110548231
JAGHRK010000003
Alphaproteobacteria
Labrenzia sp. R5_0 [JAGHRK]
592960
592871
-
Ser
GGA
[ENA]
¡û
>W2110554975
JAGIPH010000001
Alphaproteobacteria
Neorhizobium galegae DS1499 [JAGIPH]
1323508
1323597
+
Ser
GGA
[ENA]
¡û
>W2110568388
JAGRRC010000001
Alphaproteobacteria
Ciceribacter sp. L1K23 [JAGRRC]
3579781
3579870
+
Ser
GGA
[ENA]
¡û
>W2110591569
JAHBRX010000001
Alphaproteobacteria
Chelatococcus sp. HY11 [JAHBRX]
3975413
3975502
+
Ser
GGA
[ENA]
¡û
>W2110606346
JAHHZO010000008
Alphaproteobacteria
Rhizobium sp. CSW-27 [JAHHZO]
97923
98012
+
Ser
GGA
[ENA]
¡û
>W2110649479
JAHUWO010000001
Alphaproteobacteria
Ensifer sp. ENS12 [JAHUWO]
988882
988793
-
Ser
GGA
[ENA]
¡û
>C201311100
LR723668
Alphaproteobacteria
Rhizobium sp. Khangiran2 [LR723668]
3364751
3364840
+
Ser
GGA
-
¡û
>C201311220
LR723675
Alphaproteobacteria
Rhizobium sp. TCK [LR723675]
1284055
1283966
-
Ser
GGA
-
¡û
>C211061848
CP044011
Alphaproteobacteria
Sinorhizobium sp. BG8 [CP044011]
851882
851971
+
Ser
GGA
-
¡û
>C211220493
CP066026
Alphaproteobacteria
Brevundimonas diminuta FDAARGOS_1026 [CP066026]
3064198
3064287
+
Ser
GGA
-
¡û
>C211232407
CP066786
Alphaproteobacteria
Martelella lutilitoris ZRK001 [CP066786]
736057
736146
+
Ser
GGA
-
¡û
>C231052839
CP045617
Alphaproteobacteria
Roseibium aggregatum RF14 [CP045617]
1366759
1366848
+
Ser
GGA
-
¡û
>C231052918
CP045622
Alphaproteobacteria
Roseibium aggregatum SDL044 [CP045622]
5175782
5175871
+
Ser
GGA
-
¡û
>C231053024
CP045631
Alphaproteobacteria
Roseibium aggregatum ZYF612 [CP045631]
2415139
2415050
-
Ser
GGA
-
¡û
>C231180479
CP083370
Alphaproteobacteria
Ensifer sp. T173 [CP083370]
3853498
3853587
+
Ser
GGA
-
¡û
>C231192345
CP084486
Alphaproteobacteria
Ensifer adhaerens E-60 [CP084486]
3874142
3874231
+
Ser
GGA
-
¡û
>C231201059
CP084911
Alphaproteobacteria
Asticcacaulis sp. AND118 [CP084910, CP084911]
510687
510598
-
Ser
GGA
-
¡û
>C231235876
CP087156
Alphaproteobacteria
Roseibium aggregatum LZB033 [CP087156]
1610536
1610447
-
Ser
GGA
-
¡û
>C231259838
CP089295
Alphaproteobacteria
Methylobacterium currus TP-3 [CP089295, CP089296]
6158723
6158812
+
Ser
GGA
-
¡û
>C231437753
CP101517
Alphaproteobacteria
Ensifer adhaerens NER9 [CP101517]
3847415
3847504
+
Ser
GGA
-
¡û
>C231562531
CP114786
Alphaproteobacteria
Roseibium sp. Sym1 [CP114786]
574562
574651
+
Ser
GGA
-
¡û
>C231582247
CP116770
Alphaproteobacteria
Brevundimonas sp. 2003-09-23 [CP116770]
2526146
2526235
+
Ser
GGA
-
¡û
>C231642864
CP121700
Alphaproteobacteria
Methylobacterium indicum JDJ13 [CP121700]
4752993
4752904
-
Ser
GGA
-
¡û
>C231649933
CP123000
Alphaproteobacteria
Neorhizobium petrolearium OS53 [CP123000]
5392284
5392195
-
Ser
GGA
-
¡û
>C241094817
CP045328
Alphaproteobacteria
Labrenzia sp. THAF191b [CP045328]
553952
554041
+
Ser
GGA
-
¡û
>C241094869
CP045333
Alphaproteobacteria
Labrenzia sp. THAF191a [CP045333]
553952
554041
+
Ser
GGA
-
¡û
>C241095039
CP045344
Alphaproteobacteria
Labrenzia sp. THAF187b [CP045344]
553952
554041
+
Ser
GGA
-
¡û
>C241095292
CP045354
Alphaproteobacteria
Labrenzia sp. THAF82 [CP045354]
5890559
5890648
+
Ser
GGA
-
¡û
>C241135149
CP049241
Alphaproteobacteria
Allorhizobium pseudoryzae DSM 19479 [CP049241]
957213
957302
+
Ser
GGA
-
¡û
>C241135243
CP049250
Alphaproteobacteria
Rhizobium rhizoryzae DSM 29514 [CP049250]
767165
767076
-
Ser
GGA
-
¡û
>C241169431
CP054858
Alphaproteobacteria
Martelella sp. NC18 [CP054858]
4070169
4070080
-
Ser
GGA
-
¡û
>C241169456
CP054861
Alphaproteobacteria
Martelella sp. NC20 [CP054861]
2358545
2358634
+
Ser
GGA
-
¡û
>C241241440
CP120365
Alphaproteobacteria
Sinorhizobium kummerowiae CCBAU 71714 [CP120365]
2542855
2542944
+
Ser
GGA
-
¡û
>C241242711
CP120863
Alphaproteobacteria
Roseibium porphyridii KMA01 [CP120863]
5382779
5382868
+
Ser
GGA
-
¡û
>C241331982
CP137016
Alphaproteobacteria
Sinorhizobium fredii GR64 [CP137016]
130277
130366
+
Ser
GGA
-
¡û
>C241353659
CP140006
Alphaproteobacteria
Brevundimonas diminuta HAMBI_0018 [CP140006]
2461072
2461161
+
Ser
GGA
-
¡û
>C241357747
CP140884
Alphaproteobacteria
Sinorhizobium meliloti ml46 [CP140884]
239720
239809
+
Ser
GGA
-
¡û
>C241357797
CP140886
Alphaproteobacteria
Sinorhizobium medicae ml60 [CP140886]
226068
226157
+
Ser
GGA
-
¡û
>C241358099
CP140924
Alphaproteobacteria
Sinorhizobium medicae ml18 [CP140924]
241140
241229
+
Ser
GGA
-
¡û
>C241359686
CP141212
Alphaproteobacteria
Sinorhizobium meliloti LMB1 [CP141212]
175547
175636
+
Ser
GGA
-
¡û
>C11100716
CP002396
Alphaproteobacteria
Asticcacaulis excentricus CB 48 [CP002395, CP002396]
127963
127874
-
Ser
GGA
[Ensembl]
¡û
>C11117271
CP002568
Alphaproteobacteria
Polymorphum gilvum SL003B-26A1 [CP002568]
4059386
4059475
+
Ser
GGA
[Ensembl]
¡û
>C11120793
CP002781
Alphaproteobacteria
Sinorhizobium meliloti AK83 [CP002781, CP002782, CP002783]
3662616
3662705
+
Ser
GGA
[Ensembl]
¡û
>C11120847
CP002740
Alphaproteobacteria
Sinorhizobium meliloti BL225C [CP002740]
3515287
3515376
+
Ser
GGA
[Ensembl]
¡û
>W11123411
ADUI01000023
Alphaproteobacteria
Brevundimonas diminuta ATCC 11568 [ADUI]
6157
6246
+
Ser
GGA
[ENA]
¡û
>W11135839
AEFL01000002
Alphaproteobacteria
Roseibium sp. TrichSKD4 [AEFL]
20340
20251
-
Ser
GGA
[ENA]
¡û
>W1511596043
LBNT01000001
Alphaproteobacteria
Brevundimonas diminuta XGC1 [LBNT]
165662
165751
+
Ser
GGA
[ENA]
¡û
>W1511705869
LGSQ01000014
Alphaproteobacteria
Pannonibacter phragmitetus CGMCC9175 [LGSQ]
93079
92990
-
Ser
GGA
[ENA]
¡û
>C161050756
CP013068
Alphaproteobacteria
Pannonibacter phragmitetus 31801 [CP013068]
772902
772991
+
Ser
GGA
[Ensembl]
¡û
>C161070353
CP014275
Alphaproteobacteria
Martelella sp. AD-3 [CP014275]
533104
533193
+
Ser
GGA
[Ensembl]
¡û
>W121066175
AJQP01000173
Alphaproteobacteria
Sinorhizobium fredii CCBAU 83622 [AJQP]
326
415
+
Ser
GGA
[ENA]
¡û
>W121103588
AKZR01000224
Alphaproteobacteria
Sinorhizobium meliloti H1 [AKZR]
10389
10300
-
Ser
GGA
[ENA]
¡û
>W121103881
AKZX01000269
Alphaproteobacteria
Sinorhizobium meliloti A0643DD [AKZX]
3886
3975
+
Ser
GGA
[ENA]
¡û
>W121103951
AKZY01000286
Alphaproteobacteria
Sinorhizobium meliloti A0641M [AKZY]
7049
7138
+
Ser
GGA
[ENA]
¡û
>W1610092072
CXTY01000008
Alphaproteobacteria
Roseibium album alba [CXTY]
110212
110123
-
Ser
GGA
[ENA]
¡û
>W1610092136
CXWA01000009
Alphaproteobacteria
Roseibium album alba [CXWA]
228652
228741
+
Ser
GGA
[ENA]
¡û
>W1610092189
CXWC01000015
Alphaproteobacteria
Roseibium album alba [CXWC]
228652
228741
+
Ser
GGA
[ENA]
¡û
>W1610092232
CXWD01000015
Alphaproteobacteria
Roseibium alexandrii [CXWD]
121079
120990
-
Ser
GGA
[ENA]
¡û
>W1610092270
CXWE01000008
Alphaproteobacteria
Roseibium album alba [CXWE]
228652
228741
+
Ser
GGA
[ENA]
¡û
>C131010030
CP003933
Alphaproteobacteria
Sinorhizobium meliloti GR4 [CP003933]
238462
238551
+
Ser
GGA
[Ensembl]
¡û
>W1610649001
LJHQ01000059
Alphaproteobacteria
Bosea sp. AAP35 [LJHQ]
22655
22566
-
Ser
GGA
[ENA]
¡û
>W1610741030
LMRD01000010
Alphaproteobacteria
Aurantimonas sp. Leaf443 [LMRD]
3236
3147
-
Ser
GGA
[ENA]
¡û
>W1710095429
CXTY01000008
Alphaproteobacteria
Roseibium album alba [CXTY]
110212
110123
-
Ser
GGA
[ENA]
¡û
>W1710095493
CXWA01000009
Alphaproteobacteria
Roseibium album alba [CXWA]
228652
228741
+
Ser
GGA
[ENA]
¡û
>W1710095546
CXWC01000015
Alphaproteobacteria
Roseibium album alba [CXWC]
228652
228741
+
Ser
GGA
[ENA]
¡û
>W1710095589
CXWD01000015
Alphaproteobacteria
Roseibium alexandrii [CXWD]
121079
120990
-
Ser
GGA
[ENA]
¡û
>W1710095627
CXWE01000008
Alphaproteobacteria
Roseibium album alba [CXWE]
228652
228741
+
Ser
GGA
[ENA]
¡û
>W1710561967
FOON01000008
Alphaproteobacteria
Ensifer sp. OV372 [FOON]
98560
98649
+
Ser
GGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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