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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.28463 (180 seq.)
>W131179622
ARMN01000026
Gammaproteobacteria
Amphritea japonica ATCC BAA-1530 [ARMN]
7823
7735
-
Ser
GCT
[ENA]
¡û
>W131229267
AUGR01000007
Gammaproteobacteria
Neptunomonas japonica DSM 18939 [AUGR]
55696
55785
+
Ser
GCT
[ENA]
¡û
>W1711666785
MRCI01000001
Gammaproteobacteria
Neptunomonas phycophila [MRCI]
423440
423529
+
Ser
GCT
[ENA]
¡û
>W1711666854
MRCJ01000004
Gammaproteobacteria
Neptunomonas phycophila [MRCJ]
267
178
-
Ser
GCT
[ENA]
¡û
>W1711751066
MUNJ01000010
Gammaproteobacteria
Plesiomonas shigelloides [MUNJ]
161666
161755
+
Ser
GCT
[ENA]
¡û
>W1711751069
MUNJ01000010
Gammaproteobacteria
Plesiomonas shigelloides [MUNJ]
162003
162092
+
Ser
GCT
[ENA]
¡û
>W131090580
AOGF01000006
Gammaproteobacteria
Avibacterium paragallinarum 221 [AOGF]
32092
32181
+
Ser
GCT
[ENA]
¡û
>W131157130
AQQO01000358
Gammaproteobacteria
Plesiomonas shigelloides 302-73 [AQQO]
27877
27788
-
Ser
GCT
[ENA]
¡û
>W131157133
AQQO01000358
Gammaproteobacteria
Plesiomonas shigelloides 302-73 [AQQO]
27540
27451
-
Ser
GCT
[ENA]
¡û
>W131165520
ARBQ01000025
Gammaproteobacteria
Gallibacterium anatis DSM 16844 = F 149 [ARBQ]
29377
29288
-
Ser
GCT
[ENA]
¡û
>W131252484
CBMK010000034
Gammaproteobacteria
Avibacterium paragallinarum JF4211 [CBMK]
87554
87465
-
Ser
GCT
[ENA]
¡û
>WENV180042597
LQAF01010782
[LQAF] bioreactor metagenome; bioreactor_2 inoculated with Wadden Sea sediment; 2nd replicate of a sulfate-reducing system that
184
95
-
Ser
GCT
[ENA]
¡û
>W141055172
AONB01000003
Gammaproteobacteria
Nitrincola nitratireducens AK23 [AONB]
105874
105963
+
Ser
GCT
[ENA]
¡û
>W141105740
AVOX01000053
Gammaproteobacteria
Gallibacterium anatis 12656/12 [AVOX]
29233
29144
-
Ser
GCT
[ENA]
¡û
>WENV170015528
AZIH01003071
[AZIH] marine sediment metagenome; enrichment culture of sample MGS-ANC(UA) from oil contaminated site at the Ancona Port
455
366
-
Ser
GCT
[ENA]
¡û
>WENV170016434
AZIK01004853
[AZIK] marine sediment metagenome; enrichment culture of sample MGS-ANC(AMM) from oil contaminated site at the Ancona Port
141
52
-
Ser
GCT
[ENA]
¡û
>C181160554
CP027852
Gammaproteobacteria
Plesiomonas shigelloides MS-17-188 [CP027852]
3280209
3280298
+
Ser
GCT
-
¡û
>C181160557
CP027852
Gammaproteobacteria
Plesiomonas shigelloides MS-17-188 [CP027852]
3280546
3280635
+
Ser
GCT
-
¡û
>C191119472
CP034110
Gammaproteobacteria
Avibacterium paragallinarum FARPER-174 [CP034110]
2024514
2024425
-
Ser
GCT
-
¡û
>C191198625
LR134167
Gammaproteobacteria
Avibacterium volantium NCTC3438 [LR134167]
608167
608256
+
Ser
GCT
-
¡û
>W141713649
JMSZ01000016
Gammaproteobacteria
Nitrincola lacisaponensis [JMSZ]
464335
464424
+
Ser
GCT
[ENA]
¡û
>W1910574672
JPZA01000195
Gammaproteobacteria
Avibacterium paragallinarum Modesto [JPZA]
3388
3299
-
Ser
GCT
[ENA]
¡û
>W1911003490
NLFL01000019
Gammaproteobacteria
Gallibacterium anatis SV200 [NLFL]
19376
19465
+
Ser
GCT
[ENA]
¡û
>W1911003565
NLFM01000020
Gammaproteobacteria
Gallibacterium anatis 2PKA3 [NLFM]
3147
3236
+
Ser
GCT
[ENA]
¡û
>W1810265911
PQVI01000138
Gammaproteobacteria
Avibacterium endocarditidis 20186H4H1 [PQVI]
7814
7725
-
Ser
GCT
[ENA]
¡û
>W1810265944
PQVJ01000031
Gammaproteobacteria
Avibacterium gallinarum NCTC 11188 [PQVJ]
91846
91757
-
Ser
GCT
[ENA]
¡û
>W1810266003
PQVK01000321
Gammaproteobacteria
Avibacterium paragallinarum CCUG 12835 [PQVK]
8126
8037
-
Ser
GCT
[ENA]
¡û
>W1810423070
PYSI01000002
Gammaproteobacteria
Plesiomonas shigelloides FM82 [PYSI]
234928
234839
-
Ser
GCT
[ENA]
¡û
>W1810667348
QJPI01000042
Gammaproteobacteria
Avibacterium paragallinarum SCPM-O-B-8407 [QJPI]
3016
3105
+
Ser
GCT
[ENA]
¡û
>W1810667378
QJPJ01000018
Gammaproteobacteria
Avibacterium paragallinarum SCPM-O-B-8406 [QJPJ]
39285
39374
+
Ser
GCT
[ENA]
¡û
>W1810680805
QKRX01000012
Gammaproteobacteria
Nitrincola tibetensis xg18 [QKRX]
76450
76361
-
Ser
GCT
[ENA]
¡û
>W2010290624
CABMOI010000022
Gammaproteobacteria
Enterobacterales bacterium [CABMOI]
168745
168656
-
Ser
GCT
[ENA]
¡û
>W2010290627
CABMOI010000022
Gammaproteobacteria
Enterobacterales bacterium [CABMOI]
168408
168319
-
Ser
GCT
[ENA]
¡û
>W2010760153
JPZA01000195
Gammaproteobacteria
Avibacterium paragallinarum Modesto [JPZA]
3388
3299
-
Ser
GCT
[ENA]
¡û
>W2011000193
NLFL01000019
Gammaproteobacteria
Gallibacterium anatis SV200 [NLFL]
19376
19465
+
Ser
GCT
[ENA]
¡û
>W2011000268
NLFM01000020
Gammaproteobacteria
Gallibacterium anatis 2PKA3 [NLFM]
3147
3236
+
Ser
GCT
[ENA]
¡û
>W2011482619
RQXP01000028
Gammaproteobacteria
Avibacterium paragallinarum AVPG 221 [RQXP]
21989
22078
+
Ser
GCT
[ENA]
¡û
>W2011482644
RQXQ01000017
Gammaproteobacteria
Avibacterium paragallinarum 2671 [RQXQ]
20529
20618
+
Ser
GCT
[ENA]
¡û
>W2011482685
RQXR01000022
Gammaproteobacteria
Avibacterium paragallinarum Modesto [RQXR]
5018
4929
-
Ser
GCT
[ENA]
¡û
>W2011482730
RQXS01000016
Gammaproteobacteria
Avibacterium paragallinarum SA-3 [RQXS]
20292
20381
+
Ser
GCT
[ENA]
¡û
>W2011482903
RQXV01000007
Gammaproteobacteria
Amphritea balenae JAMM 1525 [RQXV]
258706
258795
+
Ser
GCT
[ENA]
¡û
>W2011482947
RQXW01000003
Gammaproteobacteria
Amphritea sp. MCCC 1K03512 ANRC-JH13 [RQXW]
163661
163572
-
Ser
GCT
[ENA]
¡û
>W2011522289
SACQ01000005
Gammaproteobacteria
Neptunomonas sp. HPM-16 [SACQ]
54426
54515
+
Ser
GCT
[ENA]
¡û
>W2011639504
SMRS01000005
Gammaproteobacteria
Nitrincola sp. MEB193 [SMRS]
123184
123273
+
Ser
GCT
[ENA]
¡û
>W2011649229
SNXJ01000006
Gammaproteobacteria
Avibacterium gallinarum DSM 17481 [SNXJ]
34957
35046
+
Ser
GCT
[ENA]
¡û
>W2011670857
SPLL01000003
Gammaproteobacteria
Neptunomonas sp. XY-337 [SPLL]
345211
345122
-
Ser
GCT
[ENA]
¡û
>W2011762137
UATR01000022
Gammaproteobacteria
Plesiomonas shigelloides NCTC10364 [UATR]
168745
168656
-
Ser
GCT
[ENA]
¡û
>W2011762140
UATR01000022
Gammaproteobacteria
Plesiomonas shigelloides NCTC10364 [UATR]
168408
168319
-
Ser
GCT
[ENA]
¡û
>W2011815140
UFSW01000001
Gammaproteobacteria
Avibacterium paragallinarum NCTC10926 [UFSW]
1189747
1189658
-
Ser
GCT
[ENA]
¡û
>W2011823848
UGGZ01000001
Gammaproteobacteria
Gallibacterium anatis NCTC11413 [UGGZ]
2495697
2495786
+
Ser
GCT
[ENA]
¡û
>W2011824606
UGHK01000001
Gammaproteobacteria
Avibacterium paragallinarum NCTC11296 [UGHK]
766942
766853
-
Ser
GCT
[ENA]
¡û
>W2011834806
UGSP01000001
Gammaproteobacteria
Avibacterium avium NCTC11297 [UGSP]
66086
65997
-
Ser
GCT
[ENA]
¡û
>W2011834856
UGSQ01000003
Gammaproteobacteria
Avibacterium gallinarum NCTC11188 [UGSQ]
1660858
1660769
-
Ser
GCT
[ENA]
¡û
>W2011835583
UGTC01000001
Gammaproteobacteria
Plesiomonas shigelloides NCTC10363 [UGTC]
2635912
2635823
-
Ser
GCT
[ENA]
¡û
>W2011835586
UGTC01000001
Gammaproteobacteria
Plesiomonas shigelloides NCTC10363 [UGTC]
2635575
2635486
-
Ser
GCT
[ENA]
¡û
>W2011963768
VAWC01000001
Gammaproteobacteria
Neptunomonas concharum JCM 17730 [VAWC]
707533
707622
+
Ser
GCT
[ENA]
¡û
>W2012205299
VXDA01000011
Gammaproteobacteria
Avibacterium paragallinarum Hp8 [VXDA]
20571
20660
+
Ser
GCT
[ENA]
¡û
>W2012209734
VYTY01000010
Gammaproteobacteria
Nitrincola alkalisediminis JCM 19317 [VYTY]
52047
52136
+
Ser
GCT
[ENA]
¡û
>W2012230767
WBOL01000006
Gammaproteobacteria
Nitrincola schmidtii NCAIM B.02626 [WBOL]
4332
4243
-
Ser
GCT
[ENA]
¡û
>W2012230794
WBOM01000002
Gammaproteobacteria
Nitrincola alkalilacustris NCAIM B.02612 [WBOM]
116060
116149
+
Ser
GCT
[ENA]
¡û
>W2012309667
WEJV01000005
Gammaproteobacteria
Plesiomonas shigelloides G5892 [WEJV]
138895
138984
+
Ser
GCT
[ENA]
¡û
>W2012309670
WEJV01000005
Gammaproteobacteria
Plesiomonas shigelloides G5892 [WEJV]
139232
139321
+
Ser
GCT
[ENA]
¡û
>W2012309672
WEJV01000005
Gammaproteobacteria
Plesiomonas shigelloides G5892 [WEJV]
139461
139550
+
Ser
GCT
[ENA]
¡û
>W2012309768
WEJW01000004
Gammaproteobacteria
Plesiomonas shigelloides G5890 [WEJW]
41326
41415
+
Ser
GCT
[ENA]
¡û
>W2012309770
WEJW01000004
Gammaproteobacteria
Plesiomonas shigelloides G5890 [WEJW]
41555
41644
+
Ser
GCT
[ENA]
¡û
>W2012309890
WEJX01000084
Gammaproteobacteria
Plesiomonas shigelloides G5889 [WEJX]
108
19
-
Ser
GCT
[ENA]
¡û
>W2012309983
WEJY01000061
Gammaproteobacteria
Plesiomonas shigelloides G5886 [WEJY]
355
266
-
Ser
GCT
[ENA]
¡û
>W2012309985
WEJY01000061
Gammaproteobacteria
Plesiomonas shigelloides G5886 [WEJY]
126
37
-
Ser
GCT
[ENA]
¡û
>W2012310036
WEJZ01000059
Gammaproteobacteria
Plesiomonas shigelloides G5885 [WEJZ]
139
228
+
Ser
GCT
[ENA]
¡û
>W2012310149
WEKA01000111
Gammaproteobacteria
Plesiomonas shigelloides G5882 [WEKA]
5599
5510
-
Ser
GCT
[ENA]
¡û
>W2012310155
WEKA01000112
Gammaproteobacteria
Plesiomonas shigelloides G5882 [WEKA]
216
127
-
Ser
GCT
[ENA]
¡û
>W2012310211
WEKB01000072
Gammaproteobacteria
Plesiomonas shigelloides G5881 [WEKB]
41360
41449
+
Ser
GCT
[ENA]
¡û
>W2012310215
WEKB01000073
Gammaproteobacteria
Plesiomonas shigelloides G5881 [WEKB]
455
544
+
Ser
GCT
[ENA]
¡û
>W2012310295
WEKC01000079
Gammaproteobacteria
Plesiomonas shigelloides G5880 [WEKC]
41358
41447
+
Ser
GCT
[ENA]
¡û
>W2012310393
WEKD01000103
Gammaproteobacteria
Plesiomonas shigelloides G5879 [WEKD]
5396
5307
-
Ser
GCT
[ENA]
¡û
>W2012310425
WEKE01000037
Gammaproteobacteria
Plesiomonas shigelloides G5877 [WEKE]
155888
155977
+
Ser
GCT
[ENA]
¡û
>W2012310428
WEKE01000037
Gammaproteobacteria
Plesiomonas shigelloides G5877 [WEKE]
156225
156314
+
Ser
GCT
[ENA]
¡û
>W2012310525
WEKF01000062
Gammaproteobacteria
Plesiomonas shigelloides G5270 [WEKF]
104477
104566
+
Ser
GCT
[ENA]
¡û
>W2012310528
WEKF01000062
Gammaproteobacteria
Plesiomonas shigelloides G5270 [WEKF]
104814
104903
+
Ser
GCT
[ENA]
¡û
>W2012310628
WEKG01000105
Gammaproteobacteria
Plesiomonas shigelloides G5263 [WEKG]
164971
165060
+
Ser
GCT
[ENA]
¡û
>W2012310630
WEKG01000106
Gammaproteobacteria
Plesiomonas shigelloides G5263 [WEKG]
42
131
+
Ser
GCT
[ENA]
¡û
>W2110033951
BMOH01000002
Gammaproteobacteria
Amphritea balenae JCM 14781 [BMOH]
707649
707738
+
Ser
GCT
[ENA]
¡û
>W2110136807
JAACNG010000001
Gammaproteobacteria
Plesiomonas shigelloides GT4 [JAACNG]
374456
374367
-
Ser
GCT
[ENA]
¡û
>W2110136810
JAACNG010000001
Gammaproteobacteria
Plesiomonas shigelloides GT4 [JAACNG]
374119
374030
-
Ser
GCT
[ENA]
¡û
>W2110181023
JABMII010000004
Gammaproteobacteria
Spirabiliibacterium pneumoniae HPA106 [JABMII]
188036
188125
+
Ser
GCT
[ENA]
¡û
>W2110181098
JABMIJ010000013
Gammaproteobacteria
Spirabiliibacterium falconis NCTC 11878 [JABMIJ]
55554
55643
+
Ser
GCT
[ENA]
¡û
>W2110181251
JABTBO010000014
Gammaproteobacteria
Spirabiliibacterium mucosae 20609_3 [JABTBO]
50688
50599
-
Ser
GCT
[ENA]
¡û
>W2110203754
JACEVN010000019
Gammaproteobacteria
Avibacterium paragallinarum AP1-2N-1 [JACEVN]
39106
39195
+
Ser
GCT
[ENA]
¡û
>W2110203807
JACEVO010000019
Gammaproteobacteria
Avibacterium paragallinarum AP1-3N-1 [JACEVO]
39106
39195
+
Ser
GCT
[ENA]
¡û
>W2110203918
JACEVQ010000018
Gammaproteobacteria
Avibacterium paragallinarum AP12-4N-1 [JACEVQ]
39106
39195
+
Ser
GCT
[ENA]
¡û
>W2110204025
JACEVS010000018
Gammaproteobacteria
Avibacterium paragallinarum APX1-1N-2 [JACEVS]
39106
39195
+
Ser
GCT
[ENA]
¡û
>W2110204080
JACEVT010000017
Gammaproteobacteria
Avibacterium paragallinarum APX1-1S-1 [JACEVT]
39104
39193
+
Ser
GCT
[ENA]
¡û
>W2110204136
JACEVU010000017
Gammaproteobacteria
Avibacterium paragallinarum APX1-2N-1 [JACEVU]
39106
39195
+
Ser
GCT
[ENA]
¡û
>W2110204191
JACEVV010000018
Gammaproteobacteria
Avibacterium paragallinarum APX2-2N-2 [JACEVV]
39106
39195
+
Ser
GCT
[ENA]
¡û
>W2110204246
JACEVW010000018
Gammaproteobacteria
Avibacterium paragallinarum APX3-2S-2 [JACEVW]
39106
39195
+
Ser
GCT
[ENA]
¡û
>W2110204294
JACEVX010000018
Gammaproteobacteria
Avibacterium paragallinarum Y2S-2 [JACEVX]
39107
39196
+
Ser
GCT
[ENA]
¡û
>W2110204355
JACEVY010000020
Gammaproteobacteria
Avibacterium paragallinarum Z1N-1-2 [JACEVY]
39106
39195
+
Ser
GCT
[ENA]
¡û
>W2110204407
JACEVZ010000020
Gammaproteobacteria
Avibacterium paragallinarum Z1N-2-1 [JACEVZ]
39106
39195
+
Ser
GCT
[ENA]
¡û
>W2110204461
JACEWA010000019
Gammaproteobacteria
Avibacterium paragallinarum Z1N-2-2 [JACEWA]
39106
39195
+
Ser
GCT
[ENA]
¡û
>W2110204523
JACEWB010000015
Gammaproteobacteria
Avibacterium paragallinarum Z1S-2-1 [JACEWB]
25819
25730
-
Ser
GCT
[ENA]
¡û
>W2110204568
JACEWC010000018
Gammaproteobacteria
Avibacterium paragallinarum Z2S-1-2 [JACEWC]
39106
39195
+
Ser
GCT
[ENA]
¡û
>W2110204630
JACEWD010000015
Gammaproteobacteria
Avibacterium paragallinarum Z2S-2-1 [JACEWD]
25819
25730
-
Ser
GCT
[ENA]
¡û
>W2110326503
JADION010000017
Gammaproteobacteria
Gallibacterium anatis 1637 [JADION]
22742
22831
+
Ser
GCT
[ENA]
¡û
>W2110496086
JAFFZO010000031
Gammaproteobacteria
Amphritea sp. ZJ14W [JAFFZO]
51533
51622
+
Ser
GCT
[ENA]
¡û
>W2110496129
JAFFZP010000007
Gammaproteobacteria
Amphritea sp. RP18W [JAFFZP]
36748
36659
-
Ser
GCT
[ENA]
¡û
>W2110500824
JAFIDL010000013
Gammaproteobacteria
Amphritea spongicola JCM 16668 [JAFIDL]
11515
11426
-
Ser
GCT
[ENA]
¡û
>W2110517848
JAFNAA010000013
Gammaproteobacteria
Plesiomonas shigelloides zfcc0051 [JAFNAA]
69095
69184
+
Ser
GCT
[ENA]
¡û
>W2110517851
JAFNAA010000013
Gammaproteobacteria
Plesiomonas shigelloides zfcc0051 [JAFNAA]
69432
69521
+
Ser
GCT
[ENA]
¡û
>W2110602343
JAHHDZ010000001
Gammaproteobacteria
Neptunomonas phycophila 3B05 [JAHHDZ]
478975
478886
-
Ser
GCT
[ENA]
¡û
>W2110612289
JAHKQE010000013
Gammaproteobacteria
Amphritea atlantica C1R06 [JAHKQE]
94882
94793
-
Ser
GCT
[ENA]
¡û
>W2110648339
JAHUUH010000003
Gammaproteobacteria
Pasteurellaceae bacterium TAE3-ERU1 [JAHUUH]
64664
64575
-
Ser
GCT
[ENA]
¡û
>C201236553
CP050316
Gammaproteobacteria
Avibacterium paragallinarum ESV-135 [CP050316]
1786971
1786882
-
Ser
GCT
-
¡û
>C201250014
CP051636
Gammaproteobacteria
Avibacterium paragallinarum ADL-AP17 [CP051636]
94798
94887
+
Ser
GCT
-
¡û
>C201250065
CP051637
Gammaproteobacteria
Avibacterium paragallinarum ADL-AP16 [CP051637]
94795
94884
+
Ser
GCT
-
¡û
>C201250115
CP051638
Gammaproteobacteria
Avibacterium paragallinarum ADL-AP15 [CP051638]
94798
94887
+
Ser
GCT
-
¡û
>C201250166
CP051639
Gammaproteobacteria
Avibacterium paragallinarum ADL-AP10 [CP051639]
94798
94887
+
Ser
GCT
-
¡û
>C201250215
CP051640
Gammaproteobacteria
Avibacterium paragallinarum ADL-AP07 [CP051640]
94798
94887
+
Ser
GCT
-
¡û
>C201250264
CP051641
Gammaproteobacteria
Avibacterium paragallinarum ADL-AP02 [CP051641]
94798
94887
+
Ser
GCT
-
¡û
>C201250314
CP051642
Gammaproteobacteria
Avibacterium paragallinarum ADL-AP01 [CP051642]
94798
94887
+
Ser
GCT
-
¡û
>C201295705
CP058307
Gammaproteobacteria
Avibacterium paragallinarum AVPG2015 [CP058307]
1798557
1798468
-
Ser
GCT
-
¡û
>C211000075
AP014545
Gammaproteobacteria
Amphritea japonica ATCC BAA-1530 [AP014545]
589498
589587
+
Ser
GCT
-
¡û
>C211000145
AP014546
Gammaproteobacteria
Neptunomonas japonica JAMM 1380 [AP014546]
736071
736160
+
Ser
GCT
-
¡û
>C211158777
CP062196
Gammaproteobacteria
Plesiomonas shigelloides P5462 [CP062196]
2654360
2654271
-
Ser
GCT
-
¡û
>C211158780
CP062196
Gammaproteobacteria
Plesiomonas shigelloides P5462 [CP062196]
2654023
2653934
-
Ser
GCT
-
¡û
>W2110716296
JAJAGI010000028
Gammaproteobacteria
Avibacterium paragallinarum omv-p4chr1 [JAJAGI]
511
422
-
Ser
GCT
[ENA]
¡û
>C211390849
CP081939
Gammaproteobacteria
Avibacterium paragallinarum p4chr1 [CP081939]
1996457
1996368
-
Ser
GCT
-
¡û
>C231011263
AP025281
Gammaproteobacteria
Aliamphritea hakodatensis PT3 [AP025281]
4581108
4581019
-
Ser
GCT
-
¡û
>C231011341
AP025282
Gammaproteobacteria
Aliamphritea ceti KCTC 42154 [AP025282]
4607155
4607066
-
Ser
GCT
-
¡û
>C231011459
AP025284
Gammaproteobacteria
Amphritea atlantica JCM 14776 [AP025284]
644983
645072
+
Ser
GCT
-
¡û
>C231019749
AP025761
Gammaproteobacteria
Amphritea japonica JCM 14782 [AP025761]
589509
589598
+
Ser
GCT
-
¡û
>W2110747067
LJYU01000028
Gammaproteobacteria
Neptunomonas qingdaonensis P10-2-4 [LJYU]
302159
302070
-
Ser
GCT
[ENA]
¡û
>C231244963
CP087711
Gammaproteobacteria
Plesiomonas shigelloides 7A [CP087711, CP087712]
427518
427429
-
Ser
GCT
-
¡û
>C231244966
CP087711
Gammaproteobacteria
Plesiomonas shigelloides 7A [CP087711, CP087712]
427181
427092
-
Ser
GCT
-
¡û
>C231298818
CP091456
Gammaproteobacteria
Avibacterium sp. 20-132 [CP091456]
1174686
1174775
+
Ser
GCT
-
¡û
>C231358021
CP095161
Gammaproteobacteria
Avibacterium paragallinarum ZJ-C [CP095161]
1732767
1732678
-
Ser
GCT
-
¡û
>C231500636
CP104914
Gammaproteobacteria
Avibacterium paragallinarum AG21-0333 [CP104914]
614894
614983
+
Ser
GCT
-
¡û
>C231500691
CP104917
Gammaproteobacteria
Avibacterium paragallinarum AP-2 [CP104917]
338862
338951
+
Ser
GCT
-
¡û
>C231529038
CP110225
Gammaproteobacteria
Gallibacterium anatis IMT49310 [CP110225]
2282681
2282770
+
Ser
GCT
-
¡û
>C231558105
CP114281
Gammaproteobacteria
Gallibacterium anatis ESV200 [CP114281]
2457514
2457603
+
Ser
GCT
-
¡û
>C241083068
CP043869
Gammaproteobacteria
Neptunomonas concharum JCM17730 [CP043869]
620359
620448
+
Ser
GCT
-
¡û
>C241087505
CP044222
Gammaproteobacteria
Nitrincola iocasae KXZD1103 [CP044222]
3241327
3241238
-
Ser
GCT
-
¡û
>C11109536
CP002667
Gammaproteobacteria
Gallibacterium anatis UMN179 [CP002667]
987320
987231
-
Ser
GCT
[Ensembl]
¡û
>W1511301050
JPHN01000026
Gammaproteobacteria
Gallibacterium anatis DSM 16844 = F 149 F149 [JPHN]
29209
29120
-
Ser
GCT
[ENA]
¡û
>W1511301094
JPHO01000003
Gammaproteobacteria
Gallibacterium anatis 10672-6 [JPHO]
2417
2506
+
Ser
GCT
[ENA]
¡û
>W1511303423
JPJK01000010
Gammaproteobacteria
Gallibacterium anatis 12158-5 [JPJK]
3166
3255
+
Ser
GCT
[ENA]
¡û
>W1511303476
JPJL01000029
Gammaproteobacteria
Gallibacterium anatis 7990 [JPJL]
2290
2379
+
Ser
GCT
[ENA]
¡û
>W1511303549
JPJM01000055
Gammaproteobacteria
Gallibacterium anatis str. Avicor [JPJM]
2298
2387
+
Ser
GCT
[ENA]
¡û
>W1511303559
JPJN01000013
Gammaproteobacteria
Gallibacterium anatis 21K2 [JPJN]
2997
3086
+
Ser
GCT
[ENA]
¡û
>W1511303651
JPJO01000079
Gammaproteobacteria
Gallibacterium anatis 23K10 [JPJO]
7966
7877
-
Ser
GCT
[ENA]
¡û
>W1511303664
JPJP01000011
Gammaproteobacteria
Gallibacterium anatis 23T10 [JPJP]
7859
7770
-
Ser
GCT
[ENA]
¡û
>W1511303733
JPJQ01000028
Gammaproteobacteria
Gallibacterium anatis 4895 [JPJQ]
14133
14044
-
Ser
GCT
[ENA]
¡û
>W1511314273
JPTU01000047
Gammaproteobacteria
Gallibacterium anatis 10672/9 [JPTU]
29429
29340
-
Ser
GCT
[ENA]
¡û
>W1511317983
JPXO01000035
Gammaproteobacteria
Gallibacterium anatis 21T2 [JPXO]
2439
2528
+
Ser
GCT
[ENA]
¡û
>W1511318035
JPXP01000032
Gammaproteobacteria
Gallibacterium anatis 36961/Sv7 [JPXP]
2327
2416
+
Ser
GCT
[ENA]
¡û
>W1511318085
JPXQ01000025
Gammaproteobacteria
Gallibacterium anatis IPDH697-78 [JPXQ]
3173
3262
+
Ser
GCT
[ENA]
¡û
>W1511318162
JPXR01000072
Gammaproteobacteria
Gallibacterium anatis Gerl.3348/80 [JPXR]
7854
7765
-
Ser
GCT
[ENA]
¡û
>W1511318199
JPXS01000038
Gammaproteobacteria
Gallibacterium anatis 20558/3kl. [JPXS]
29203
29114
-
Ser
GCT
[ENA]
¡û
>W1511318215
JPXT01000012
Gammaproteobacteria
Gallibacterium anatis CCM5995 [JPXT]
2541
2630
+
Ser
GCT
[ENA]
¡û
>W1511318295
JPXU01000047
Gammaproteobacteria
Gallibacterium anatis Gerl.4224/88 [JPXU]
2284
2373
+
Ser
GCT
[ENA]
¡û
>W1511318325
JPXV01000018
Gammaproteobacteria
Gallibacterium anatis F0003406 [JPXV]
14117
14028
-
Ser
GCT
[ENA]
¡û
>W1511318402
JPXW01000044
Gammaproteobacteria
Gallibacterium anatis 1797 [JPXW]
29300
29211
-
Ser
GCT
[ENA]
¡û
>W1511318442
JPXX01000024
Gammaproteobacteria
Gallibacterium genomosp. 1 1 CCM5974 [JPXX]
2703
2792
+
Ser
GCT
[ENA]
¡û
>W1511349166
JRLB01000011
Gammaproteobacteria
Nitrincola sp. A-D6 [JRLB]
12021
11932
-
Ser
GCT
[ENA]
¡û
>W1511478839
JWHQ01000007
Gammaproteobacteria
Plesiomonas shigelloides GN7 [JWHQ]
12173
12084
-
Ser
GCT
[ENA]
¡û
>W1511478842
JWHQ01000007
Gammaproteobacteria
Plesiomonas shigelloides GN7 [JWHQ]
11836
11747
-
Ser
GCT
[ENA]
¡û
>W1511565050
LAEN01000057
Gammaproteobacteria
Avibacterium paragallinarum CL [LAEN]
19591
19502
-
Ser
GCT
[ENA]
¡û
>W1511565118
LAEO01000011
Gammaproteobacteria
Avibacterium paragallinarum AVPG2015 [LAEO]
163946
163857
-
Ser
GCT
[ENA]
¡û
>W11160634
AFFP01000001
Gammaproteobacteria
Avibacterium paragallinarum 72 [AFFP]
41614
41703
+
Ser
GCT
[ENA]
¡û
>C161109389
LT575468
Gammaproteobacteria
Plesiomonas shigelloides NCTC10360 [LT575468]
2551591
2551502
-
Ser
GCT
[Ensembl]
¡û
>C161109392
LT575468
Gammaproteobacteria
Plesiomonas shigelloides NCTC10360 [LT575468]
2551254
2551165
-
Ser
GCT
[Ensembl]
¡û
>W1610545152
JTJN01000096
Gammaproteobacteria
Gallibacterium anatis [JTJN]
449
360
-
Ser
GCT
[ENA]
¡û
>W1610545195
JTJO01000042
Gammaproteobacteria
Gallibacterium anatis [JTJO]
2426
2515
+
Ser
GCT
[ENA]
¡û
>W1610545214
JTJP01000005
Gammaproteobacteria
Gallibacterium genomosp. 1 [JTJP]
38222
38133
-
Ser
GCT
[ENA]
¡û
>W1610545301
JTJQ01000037
Gammaproteobacteria
Gallibacterium genomosp. 1 [JTJQ]
38260
38171
-
Ser
GCT
[ENA]
¡û
>W1710551439
FOGB01000012
Gammaproteobacteria
Amphritea atlantica [FOGB]
11454
11365
-
Ser
GCT
[ENA]
¡û
>W1710562189
FOOU01000002
Gammaproteobacteria
Neptunomonas qingdaonensis [FOOU]
284663
284574
-
Ser
GCT
[ENA]
¡û
>W1710648283
JTJN01000096
Gammaproteobacteria
Gallibacterium anatis [JTJN]
449
360
-
Ser
GCT
[ENA]
¡û
>W1710648326
JTJO01000042
Gammaproteobacteria
Gallibacterium anatis [JTJO]
2426
2515
+
Ser
GCT
[ENA]
¡û
>W1710648345
JTJP01000005
Gammaproteobacteria
Gallibacterium genomosp. 1 [JTJP]
38222
38133
-
Ser
GCT
[ENA]
¡û
>W1710648432
JTJQ01000037
Gammaproteobacteria
Gallibacterium genomosp. 1 [JTJQ]
38260
38171
-
Ser
GCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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