This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.284731 (5 seq.)
>WENV170672039
LAHU01281285
[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
126
52
-
Pro
TGG
[ENA]
¡û
>WENV170972439
MTKX01030095
[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
68
142
+
Pro
TGG
[ENA]
¡û
>WENV170973723
MTKY01050792
[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
4794
4720
-
Pro
TGG
[ENA]
¡û
>WENV170973815
MTKY01051080
[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
4683
4609
-
Pro
TGG
[ENA]
¡û
>WENV170976665
MTKZ01010520
[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
9448
9522
+
Pro
TGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK