tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.291618 (82 seq.)
>W1710815794 LKKO01000018 Alphaproteobacteria Methylobacterium sp. GXS13 [LKKO] 90011 90086 + Met CAT [ENA] ¡û
>W1710872772 LMMG01000005 Alphaproteobacteria Methylobacterium sp. Leaf86 [LMMG] 84511 84436 - Met CAT [ENA] ¡û
>W1710873230 LMMQ01000015 Alphaproteobacteria Methylobacterium sp. Leaf92 [LMMQ] 109306 109381 + Met CAT [ENA] ¡û
>W1710873379 LMMS01000030 Alphaproteobacteria Methylobacterium sp. Leaf93 [LMMS] 67376 67451 + Met CAT [ENA] ¡û
>W1710873911 LMNE01000002 Alphaproteobacteria Methylobacterium sp. Leaf111 [LMNE] 118031 118106 + Met CAT [ENA] ¡û
>W1710874029 LMNG01000030 Alphaproteobacteria Methylobacterium sp. Leaf112 [LMNG] 408291 408366 + Met CAT [ENA] ¡û
>W1710874263 LMNL01000034 Alphaproteobacteria Methylobacterium sp. Leaf117 [LMNL] 801978 802053 + Met CAT [ENA] ¡û
>W1710874468 LMNQ01000004 Alphaproteobacteria Methylobacterium sp. Leaf122 [LMNQ] 123821 123896 + Met CAT [ENA] ¡û
>W1710874645 LMNU01000006 Alphaproteobacteria Methylobacterium sp. Leaf125 [LMNU] 26017 25942 - Met CAT [ENA] ¡û
>W1711129617 LUUB01000086 Alphaproteobacteria Bradyrhizobium centrolobii BR 10245 [LUUB] 29792 29867 + Met CAT [ENA] ¡û
>W1711504237 MKUJ01000003 Alphaproteobacteria Afipia sp. 64-13 [MKUJ] 12251 12326 + Met CAT [ENA] ¡û
>W1711505927 MKVY01000038 Alphaproteobacteria Rhizobiales bacterium 65-9 [MKVY] 525135 525060 - Met CAT [ENA] ¡û
>WENV180032081 FTJU01070054 [FTJU] metagenome; soil 7 82 + Ile2 CAT [ENA] ¡û
>WENV180292187 OBIV01342065 [OBIV] soil metagenome; Clay 233 308 + Ile2 CAT [ENA] ¡û
>W141223342 BADE01000037 Alphaproteobacteria Methylobacterium sp. B34 [BADE] 9330 9405 + Met CAT [ENA] ¡û
>WENV183745191 PJUL01004965 [PJUL] feces metagenome; Chicken feces enriched on filter paper 1596 1521 - Ile2 CAT [ENA] ¡û
>WENV170565705 FKKE01000045 [FKKE] freshwater metagenome; freshwater 4555 4480 - Met CAT [ENA] ¡û
>WENV170623462 FUWD013152291 [FUWD] metagenome; unknown 957 1032 + Met CAT [ENA] ¡û
>WENV170631727 FUWD013363212 [FUWD] metagenome; unknown 957 1032 + Met CAT [ENA] ¡û
>WENV170706107 LNAP01001139 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 722 797 + Met CAT [ENA] ¡û
>WENV170709178 LNFM01000160 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 75177 75102 - Met CAT [ENA] ¡û
>WENV170709761 LNFM01000671 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 2854 2929 + Met CAT [ENA] ¡û
>WENV170710277 LNFM01001434 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 29793 29868 + Met CAT [ENA] ¡û
>WENV170712196 LNFM01010705 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 3128 3053 - Met CAT [ENA] ¡û
>WENV170712260 LNFM01011500 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 11986 11911 - Met CAT [ENA] ¡û
>WENV170713973 LNFM01048912 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 2932 2857 - Met CAT [ENA] ¡û
>C181227835 LT962688 Alphaproteobacteria Methylorubrum extorquens TK 0001 [LT962688] 1834448 1834523 + Met CAT - ¡û
>W09107615 ABJR01000012 Alphaproteobacteria Rhodopseudomonas palustris TIE-1 [ABJR] 39661 39736 + Met CAT [ENA] ¡û
>W1910548978 FZOX01000007 Alphaproteobacteria Tardiphaga sp. OK246 [FZOX] 190947 191022 + Met CAT [ENA] ¡û
>C09107525 FP103042 Alphaproteobacteria Methylorubrum extorquens DM4 [FP103042] 4455306 4455231 - Met CAT [Ensembl] ¡û
>C09107626 CP001510 Alphaproteobacteria Methylorubrum extorquens AM1 [CP001510] 3955975 3955900 - Met CAT [Ensembl] ¡û
>W1911809165 QYYC01000029 Alphaproteobacteria Rhodopseudomonas palustris 2.1.37 [QYYC] 39833 39758 - Met CAT [ENA] ¡û
>W1810079863 PELK01000480 Alphaproteobacteria Methylobacterium frigidaeris IER25-16 [PELK] 665 740 + Met CAT [ENA] ¡û
>W1810368608 PVZS01000026 Alphaproteobacteria Alsobacter soli SH9 [PVZS] 68060 67985 - Met CAT [ENA] ¡û
>W1810487024 QAYG01000017 Alphaproteobacteria Breoghania corrubedonensis DSM 23382 [QAYG] 36236 36311 + Met CAT [ENA] ¡û
>W1810573761 QEKZ01000005 Alphaproteobacteria Methylobacterium organophilum DSM 760 [QEKZ] 7081 7008 - Met CAT [ENA] ¡û
>W1810672331 QJTI01000035 Alphaproteobacteria Rhodopseudomonas faecalis JCM 11668 [QJTI] 16875 16950 + Met CAT [ENA] ¡û
>SRA1014152 SRR023845.20643 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 252 177 - Met CAT [SRA]
>SRA1014356 SRR023845.100544 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 272 197 - Met CAT [SRA]
>SRA1014464 SRR023845.151084 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 243 168 - Met CAT [SRA]
>SRA1015193 SRR023845.495130 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 117 42 - Met CAT [SRA]
>SRA1015233 SRR023845.511108 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 67 142 + Met CAT [SRA]
>W2010169342 CABFVH010000029 Alphaproteobacteria Methylobacterium dankookense SW08-7 [CABFVH] 51144 51219 + Ile2 CAT [ENA] ¡û
>W2010324523 CACTHX010000003 Alphaproteobacteria Methylobacterium brachiatum [CACTHX] 781694 781619 - Ile2 CAT [ENA] ¡û
>SRA1034335 SRR035089.60425 454 Sequencing (SRP001810) 86 161 + Met CAT [SRA]
>W2010472598 JAAHTB010000056 Alphaproteobacteria Methylobacterium sp. BTF04 [JAAHTB] 2782 2707 - Ile2 CAT [ENA] ¡û
>W2010493374 JAAKGV010000001 Alphaproteobacteria Methylobacterium sp. DB0501 [JAAKGV] 633073 632998 - Ile2 CAT [ENA] ¡û
>W2010672767 JACCCR010000002 Alphaproteobacteria Methylobacterium sp. YL-MPn5-2016 [JACCCR] 715777 715702 - Ile2 CAT [ENA] ¡û
>W2010678119 JACDIS010000017 Alphaproteobacteria Chthonobacter sp. yh7-1 [JACDIS] 53305 53230 - Ile2 CAT [ENA] ¡û
>W2010703758 JACHIJ010000007 Alphaproteobacteria Afipia massiliensis DSM 17498 [JACHIJ] 290188 290263 + Ile2 CAT [ENA] ¡û
>W2011506129 RYFI01000004 Alphaproteobacteria Hansschlegelia zhihuaiae S 113 [RYFI] 235170 235245 + Ile2 CAT [ENA] ¡û
>W2011980767 VDDA01000003 Alphaproteobacteria Methylobacterium sp. 17Sr1-39 [VDDA] 536534 536459 - Ile2 CAT [ENA] ¡û
>W2012127238 VRVG01000222 Alphaproteobacteria Methylobacterium sp. WL7 [VRVG] 2000 2075 + Met CAT [ENA] ¡û
>W2110278967 JACWCW010000015 Alphaproteobacteria Methylorubrum rhodesianum I1-R3 [JACWCW] 1241 1166 - Ile2 CAT [ENA] ¡û
>W2110554800 JAGIPA010000007 Alphaproteobacteria Methylobacterium sp. PvP105 [JAGIPA] 153 78 - Ile2 CAT [ENA] ¡û
>W2110590326 JAHBGC010000020 Alphaproteobacteria Ancylobacter dichloromethanicus VKM B-2484 [JAHBGC] 115270 115195 - Ile2 CAT [ENA] ¡û
>C231248598 CP088008 Alphaproteobacteria Tardiphaga sp. 37S4 [CP088008] 3652694 3652769 + Ile2 CAT - ¡û
>C231272898 CP090349 Alphaproteobacteria Methylobacterium oryzae H33R-06 [CP090349] 3620181 3620256 + Ile2 CAT - ¡û
>C231307450 CP091851 Alphaproteobacteria Hyphomicrobiales bacterium 7MK25 [CP091851] 3038590 3038515 - Ile2 CAT - ¡û
>W2310013384 BPQR01000015 Alphaproteobacteria Methylobacterium jeotgali LMG 23639 [BPQR] 30778 30703 - Ile2 CAT [ENA] ¡û
>W2310013438 BPQS01000008 Alphaproteobacteria Methylobacterium longum DSM 23933 [BPQS] 214127 214052 - Ile2 CAT [ENA] ¡û
>W2310013556 BPQU01000063 Alphaproteobacteria Methylobacterium mesophilicum NBRC 15688 [BPQU] 11296 11371 + Met CAT [ENA] ¡û
>W2310022823 BSFJ01000005 Alphaproteobacteria Ancylobacter dichloromethanicus VKM B-2484 [BSFJ] 115270 115195 - Ile2 CAT [ENA] ¡û
>C10110746 CP001096 Alphaproteobacteria Rhodopseudomonas palustris TIE-1 [CP001096] 1968413 1968488 + Met CAT [Ensembl] ¡û
>W1511563291 LABY01000034 Alphaproteobacteria Methylobacterium variabile DSM 16961 [LABY] 18534 18609 + Met CAT [ENA] ¡û
>W121065418 AJPZ01000570 Alphaproteobacteria Bradyrhizobium japonicum CCBAU 15618 [AJPZ] 827 902 + Met CAT [ENA] ¡û
>W1610735050 LMME01000018 Alphaproteobacteria Methylobacterium sp. Leaf85 [LMME] 9960 9885 - Met CAT [ENA] ¡û
>W1610735345 LMML01000010 Alphaproteobacteria Methylobacterium sp. Leaf89 [LMML] 11438 11363 - Met CAT [ENA] ¡û
>W1610736039 LMMZ01000023 Alphaproteobacteria Methylobacterium sp. Leaf104 [LMMZ] 443946 443871 - Met CAT [ENA] ¡û
>W1610736935 LMNS01000038 Alphaproteobacteria Methylobacterium sp. Leaf123 [LMNS] 505678 505603 - Met CAT [ENA] ¡û
>W1610739596 LMPY01000010 Alphaproteobacteria Methylobacterium sp. Leaf361 [LMPY] 51186 51261 + Met CAT [ENA] ¡û
>W1610741559 LMRM01000056 Alphaproteobacteria Methylobacterium sp. Leaf94 [LMRM] 94825 94750 - Met CAT [ENA] ¡û
>W1610907977 LSEF01000081 Alphaproteobacteria Bradyrhizobium neotropicale [LSEF] 66632 66707 + Met CAT [ENA] ¡û
>W1610912684 LSIM01000148 Alphaproteobacteria Bradyrhizobium sp. CCH4-A6 [LSIM] 31121 31196 + Met CAT [ENA] ¡û
>W1610913070 LSIX01000337 Alphaproteobacteria Methylobacterium sp. CCH5-D2 [LSIX] 2226 2151 - Met CAT [ENA] ¡û
>W1610917587 LSNC01000042 Alphaproteobacteria Methylorubrum populi [LSNC] 8531 8456 - Met CAT [ENA] ¡û
>W1610940690 LUUB01000086 Alphaproteobacteria Bradyrhizobium centrolobii BR 10245 [LUUB] 29792 29867 + Met CAT [ENA] ¡û
>W1610978999 LVYV01000053 Alphaproteobacteria Tardiphaga robiniae [LVYV] 50026 50101 + Met CAT [ENA] ¡û
>W1710559260 FOMM01000026 Alphaproteobacteria Methylobacterium sp. 13MFTsu3.1M2 [FOMM] 99927 100002 + Met CAT [ENA] ¡û
>W1710567574 FOSV01000050 Alphaproteobacteria Methylorubrum salsuginis [FOSV] 1827 1752 - Met CAT [ENA] ¡û
>W1710709707 LDRL01000031 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRL] 35063 34988 - Met CAT [ENA] ¡û
>W1710709827 LDRN01000031 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRN] 37364 37439 + Met CAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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