This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.303627 (11 seq.)
>WENV170599988
FUWD010101145
[FUWD] metagenome; unknown
220
145
-
His
GTG
[ENA]
¡û
>WENV170600496
FUWD010129641
[FUWD] metagenome; unknown
276
201
-
His
GTG
[ENA]
¡û
>WENV170625889
FUWD013208320
[FUWD] metagenome; unknown
818
893
+
His
GTG
[ENA]
¡û
>WENV170625890
FUWD013208321
[FUWD] metagenome; unknown
78
153
+
His
GTG
[ENA]
¡û
>WENV170634106
FUWD013409935
[FUWD] metagenome; unknown
818
893
+
His
GTG
[ENA]
¡û
>WENV170634107
FUWD013409936
[FUWD] metagenome; unknown
78
153
+
His
GTG
[ENA]
¡û
>SRA1045790
SRR035093.170597
454 Sequencing (SRP001814)
78
153
+
His
GTG
[SRA]
>SRA1046484
SRR035093.318312
454 Sequencing (SRP001814)
169
244
+
His
GTG
[SRA]
>SRA1046563
SRR035093.332985
454 Sequencing (SRP001814)
177
252
+
His
GTG
[SRA]
>SRA1046947
SRR035093.423641
454 Sequencing (SRP001814)
216
141
-
His
GTG
[SRA]
>SRA1053838
SRR035098.509886
454 Sequencing (SRP001819)
272
347
+
His
GTG
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK