tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.303842 (111 seq.)
>W1710785567 LJHZ01000003 Alphaproteobacteria Novosphingobium sp. AAP93 [LJHZ] 27038 26963 - Val TAC [ENA] ¡û
>W1710797293 LJSX01000046 Alphaproteobacteria Saliniramus fredricksonii HL-109 [LJSX] 1790 1715 - Val TAC [ENA] ¡û
>W1710856864 LLZR01000020 Alphaproteobacteria Novosphingobium sp. Fuku2-ISO-50 [LLZR] 120060 119985 - Val TAC [ENA] ¡û
>W1710866201 LMHH01000001 Alphaproteobacteria Altererythrobacter sp. Root672 [LMHH] 316941 317016 + Val TAC [ENA] ¡û
>W1711051685 LRSE01000002 Alphaproteobacteria Croceicoccus bisphenolivorans H4 [LRSE] 249754 249829 + Val TAC [ENA] ¡û
>W1711073921 LSJB01000101 Alphaproteobacteria Erythrobacter donghaensis [LSJB] 1892 1967 + Val TAC [ENA] ¡û
>W1711074657 LSJS01000268 Alphaproteobacteria Erythrobacter donghaensis [LSJS] 1892 1967 + Val TAC [ENA] ¡û
>W1711262675 LYXZ01000056 Alphaproteobacteria Labrys sp. WJW [LYXZ] 261923 261998 + Val TAC [ENA] ¡û
>W1711292829 LZYB01000002 Alphaproteobacteria Erythrobacter dokdonensis DSW-74 [LZYB] 41853 41778 - Val TAC [ENA] ¡û
>W1711501486 MKRR01000150 Alphaproteobacteria Sphingomonas sp. 66-10 [MKRR] 1759 1684 - Val TAC [ENA] ¡û
>W1711501947 MKSE01000017 Alphaproteobacteria Altererythrobacter sp. 66-12 [MKSE] 157600 157527 - Val TAC [ENA] ¡û
>W1711502558 MKSU01000027 Alphaproteobacteria Sphingomonas sp. 67-36 [MKSU] 1895 1820 - Val TAC [ENA] ¡û
>W1711766382 MUYI01000001 Alphaproteobacteria Erythrobacter dokdonensis [MUYI] 2699028 2699103 + Val TAC [ENA] ¡û
>W131058779 ANFX01000022 Alphaproteobacteria Porphyrobacter sp. AAP82 [ANFX] 37600 37527 - Val TAC [ENA] ¡û
>W131186318 ARWA01000001 Alphaproteobacteria Methyloferula stellata AR4 [ARWA] 4033147 4033072 - Val TAC [ENA] ¡û
>W131218793 ATYA01000002 Alphaproteobacteria Methylocapsa acidiphila B2 [ATYA] 1383046 1382971 - Val TAC [ENA] ¡û
>W131222121 AUBA01000004 Alphaproteobacteria Novosphingobium acidiphilum DSM 19966 [AUBA] 117860 117785 - Val TAC [ENA] ¡û
>C171075872 CP018221 Alphaproteobacteria Tardibacter chloracetimidivorans JJ-A5 [CP018221] 1040356 1040431 + Val TAC - ¡û
>w015403 AAPC01000004 Alphaproteobacteria Xanthobacter autotrophicus Py2 [AAPC] 276402 276479 + Val TAC [ENA] ¡û
>WENV180016936 FSWC01000084 [FSWC] metagenome; soil 325 400 + Val TAC [ENA] ¢þ
>WENV180263516 OBEQ011482695 [OBEQ] groundwater metagenome; groundwater 188 116 - Val TAC [ENA] ¢þ
>WENV181184409 OEKC01000085 [OEKC] metagenome; 1998 4837 4762 - Val TAC [ENA] ¢þ
>WENV181223013 OFDC01001149 [OFDC] hot springs metagenome; Water 4349 4424 + Val TAC [ENA] ¢þ
>WENV181223092 OFDC01001896 [OFDC] hot springs metagenome; Water 2870 2797 - Val TAC [ENA] ¢þ
>WENV181307975 OFIS01000069 [OFIS] sludge metagenome; sludge 92442 92517 + Val TAC [ENA] ¢þ
>WENV181308326 OFIS01004106 [OFIS] sludge metagenome; sludge 825 750 - Val TAC [ENA] ¢þ
>WENV181308388 OFIS01010489 [OFIS] sludge metagenome; sludge 1298 1373 + Val TAC [ENA] ¢þ
>WENV181416885 OGCL01173339 [OGCL] hot springs metagenome; Hot spring water 294 219 - Val TAC [ENA] ¢þ
>W141151382 AXBA01000016 Alphaproteobacteria Azorhizobium doebereinerae UFLA1-100 [AXBA] 84402 84327 - Val TAC [ENA] ¡û
>W08006146 ABIP01000013 Alphaproteobacteria Methylobacterium nodulans ORS 2060 [ABIP] 153798 153873 + Val TAC [ENA] ¡û
>C08007352 CP000774 Alphaproteobacteria Parvibaculum lavamentivorans DS-1 [CP000774] 3444384 3444312 - Val TAC [Ensembl] ¡û
>C08011447 CP000781 Alphaproteobacteria Xanthobacter autotrophicus Py2 [CP000781] 4021550 4021625 + Val TAC [Ensembl] ¡û
>W141278835 JAFV01000001 Alphaproteobacteria Methylopila sp. 73B [JAFV] 1363206 1363131 - Val TAC [ENA] ¡û
>WENV183692696 ORMF011961819 [ORMF] groundwater metagenome; groundwater 840 765 - Val TAC [ENA] ¢þ
>WENV183748644 PPFU01063469 [PPFU] hypolithon metagenome; Antarctic Hypolithon 262 187 - Val TAC [ENA] ¢þ
>WENV170003047 AGTN01210038 [AGTN] bioreactor metagenome; poplar biomass 432 357 - Val TAC [ENA] ¢þ
>WENV170003434 AGTN01331980 [AGTN] bioreactor metagenome; poplar biomass 275 200 - Val TAC [ENA] ¢þ
>WENV170003965 AGTN01517635 [AGTN] bioreactor metagenome; poplar biomass 266 191 - Val TAC [ENA] ¢þ
>WENV170016215 AZIJ01017211 [AZIJ] marine sediment metagenome; enrichment culture of sample MGS-ElMAX(UA) from oil contaminated site at the El-Max 8579 8654 + Val TAC [ENA] ¢þ
>WENV170136879 CENV01088103 [CENV] marine metagenome genome assembly TARA_031_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 12956 13031 + Val TAC [ENA] ¢þ
>WENV170278050 CERQ01048634 [CERQ] marine metagenome genome assembly TARA_065_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 129 204 + Val TAC [ENA] ¢þ
>WENV170487498 CEVO01063643 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 882 957 + Val TAC [ENA] ¢þ
>WENV170550901 CXWF01046648 [CXWF] marine metagenome genome assembly TARA_064_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 258 183 - Val TAC [ENA] ¢þ
>WENV170682473 LFIK01000165 [LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5 36743 36818 + Val TAC [ENA] ¢þ
>WENV170683278 LFIK01008230 [LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5 6794 6719 - Val TAC [ENA] ¢þ
>W09100316 AAAV03000003 Alphaproteobacteria Novosphingobium aromaticivorans DSM 12444 [AAAV] 69352 69427 + Val TAC [ENA] ¡û
>WENV021551 AACY020579530 Marine microbial communities from Global Ocean Sampling (GOS) 157 82 - Val TAC [ENA]
>C181063195 CP022372 Alphaproteobacteria Bosea sp. AS-1 [CP022372] 3312949 3313024 + Val TAC - ¡û
>C181179102 CP029481 Alphaproteobacteria Microvirga sp. 17 mud 1-3 [CP029481] 1951184 1951259 + Val TAC - ¡û
>C181180152 CP029552 Alphaproteobacteria Methylobacterium sp. 17Sr1-1 [CP029552] 2169152 2169077 - Val TAC - ¡û
>C191155753 CP037948 Alphaproteobacteria Qipengyuania sediminis CGMCC 1.12928 [CP037948] 1166611 1166686 + Val TAC - ¡û
>C191170956 CP039695 Alphaproteobacteria Novosphingobium sp. EMRT-2 [CP039695] 1601243 1601318 + Val TAC - ¡û
>C191171232 CP039704 Alphaproteobacteria Hankyongella ginsenosidimutans W1-2-3 [CP039704] 2425130 2425205 + Val TAC - ¡û
>C191220347 LR536450 Alphaproteobacteria Methylocella tundrae [LR536450] 2210693 2210618 - Val TAC - ¡û
>C191221050 LR590083 Alphaproteobacteria Beijerinckiaceae bacterium RH AL1 [LR590083] 111809 111884 + Val TAC - ¡û
>W141733760 JNLC01000016 Alphaproteobacteria Bosea sp. 117 [JNLC] 72872 72797 - Val TAC [ENA] ¡û
>W1910006635 BAUX01000015 Alphaproteobacteria Methylopila sp. Yamaguchi [BAUX] 72757 72682 - Val TAC [ENA] ¡û
>W1910727961 MGVU01000388 Alphaproteobacteria Erythrobacter sp. RIFCSPHIGHO2_12_FULL_63_10 [MGVU] 2722 2647 - Val TAC [ENA] ¡û
>W1810120384 PHSO01000004 Alphaproteobacteria Tsuneonella flava MS1-4 [PHSO] 575524 575599 + Val TAC [ENA] ¡û
>W1810325518 PUEJ01000010 Alphaproteobacteria Labrys okinawensis RP1T [PUEJ] 145067 144992 - Val TAC [ENA] ¡û
>W1810463752 PZZU01000024 Alphaproteobacteria Novosphingobium sp. GV064 [PZZU] 39525 39450 - Val TAC [ENA] ¡û
>W1810477343 QAOS01000024 Alphaproteobacteria Novosphingobium sp. GV055 [QAOS] 39525 39450 - Val TAC [ENA] ¡û
>W1810513897 QBUA01000024 Alphaproteobacteria Novosphingobium sp. GV061 [QBUA] 39525 39450 - Val TAC [ENA] ¡û
>W1810514319 QBUI01000024 Alphaproteobacteria Novosphingobium sp. GV027 [QBUI] 39525 39450 - Val TAC [ENA] ¡û
>W1810576586 QENQ01000001 Alphaproteobacteria Sphingomonas pokkalii L3B27 [QENQ] 1370213 1370288 + Val TAC [ENA] ¡û
>W1810594377 QFZL01000004 Alphaproteobacteria Sphingosinithalassobacter portus FM6 [QFZL] 138996 139071 + Val TAC [ENA] ¡û
>W1810597592 QGHL01000004 Alphaproteobacteria Novosphingobium meiothermophilum SYSU G00007 [QGHL] 136729 136804 + Val TAC [ENA] ¡û
>W1810676904 QKMI01000008 Alphaproteobacteria Bosea sp. CF476 [QKMI] 79488 79413 - Val TAC [ENA] ¡û
>W1810763433 QQBB01000008 Alphaproteobacteria Microvirga subterranea DSM 14364 [QQBB] 12831 12906 + Val TAC [ENA] ¡û
>W1810783295 QQTO01000007 Alphaproteobacteria Bosea caraganae RCAM04680 [QQTO] 121061 121136 + Val TAC [ENA] ¡û
>W1810783349 QQTP01000007 Alphaproteobacteria Bosea caraganae RCAM04685 [QQTP] 121061 121136 + Val TAC [ENA] ¡û
>W1810858405 QTJP01000001 Alphaproteobacteria Sphingomonas crusticola MIMD3 [QTJP] 1526963 1526888 - Val TAC [ENA] ¡û
>W1810887321 QUOY01000001 Alphaproteobacteria Methylovirgula sp. 4M-Z18 [QUOY] 575434 575509 + Val TAC [ENA] ¡û
>C151073209 CP010836 Alphaproteobacteria Sphingomonas hengshuiensis WHSC-8 [CP010836] 3841529 3841454 - Val TAC [Ensembl] ¡û
>W10110080 ADBQ01000006 Alphaproteobacteria Ancylobacter novellus DSM 506 [ADBQ] 45451 45526 + Val TAC [ENA] ¡û
>C10112214 CP002026 Alphaproteobacteria Ancylobacter novellus DSM 506 [CP002026] 2310603 2310528 - Val TAC [Ensembl] ¡û
>W11112517 ADBQ01000006 Alphaproteobacteria Ancylobacter novellus DSM 506 [ADBQ] 45451 45526 + Val TAC [ENA] ¡û
>W1511398040 JTDI01000007 Alphaproteobacteria Novosphingobium malaysiense MUSC 273 [JTDI] 10058 9983 - Val TAC [ENA] ¡û
>W1511563292 LABY01000050 Alphaproteobacteria Methylobacterium variabile DSM 16961 [LABY] 340 415 + Val TAC [ENA] ¡û
>W1511563375 LABZ01000168 Alphaproteobacteria Methylobacterium tarhaniae DSM 25844 [LABZ] 31559 31634 + Val TAC [ENA] ¡û
>W1511590525 LBHB01000001 Alphaproteobacteria Aurantiacibacter luteus KA37 [LBHB] 111768 111693 - Val TAC [ENA] ¡û
>W11151091 AEWJ01000064 Alphaproteobacteria Novosphingobium nitrogenifigens DSM 19370 [AEWJ] 2602 2527 - Val TAC [ENA] ¡û
>W1610076577 BCYV01000023 Alphaproteobacteria Novosphingobium capsulatum NBRC 12533 [BCYV] 39405 39330 - Val TAC [ENA] ¡û
>W1610076709 BCYY01000031 Alphaproteobacteria Sphingomonas pituitosa NBRC 102491 [BCYY] 10884 10809 - Val TAC [ENA] ¡û
>W1610516213 FMBM01000002 Alphaproteobacteria Saliniramus fredricksonii HL-109 [FMBM] 1577193 1577118 - Val TAC [ENA] ¡û
>W1610550630 JXTJ01000008 Alphaproteobacteria Bosea sp. WAO [JXTJ] 715327 715252 - Val TAC [ENA] ¡û
>W1610590475 LDRM01000009 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRM] 14650 14575 - Val TAC [ENA] ¡û
>W1610590543 LDRN01000015 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRN] 39333 39408 + Val TAC [ENA] ¡û
>W1610649373 LJHZ01000003 Alphaproteobacteria Novosphingobium sp. AAP93 [LJHZ] 27038 26963 - Val TAC [ENA] ¡û
>W1610661250 LJSX01000046 Alphaproteobacteria Saliniramus fredricksonii HL-109 [LJSX] 1790 1715 - Val TAC [ENA] ¡û
>W1610719245 LLZR01000020 Alphaproteobacteria Novosphingobium sp. Fuku2-ISO-50 [LLZR] 120060 119985 - Val TAC [ENA] ¡û
>W1610728547 LMHH01000001 Alphaproteobacteria Altererythrobacter sp. Root672 [LMHH] 316941 317016 + Val TAC [ENA] ¡û
>W1610892814 LRSE01000002 Alphaproteobacteria Croceicoccus bisphenolivorans H4 [LRSE] 249754 249829 + Val TAC [ENA] ¡û
>W1610913226 LSJB01000101 Alphaproteobacteria Erythrobacter donghaensis [LSJB] 1892 1967 + Val TAC [ENA] ¡û
>W1610913962 LSJS01000268 Alphaproteobacteria Erythrobacter donghaensis [LSJS] 1892 1967 + Val TAC [ENA] ¡û
>W1611024542 LYXZ01000056 Alphaproteobacteria Labrys sp. WJW [LYXZ] 261923 261998 + Val TAC [ENA] ¡û
>W1611050045 LZYB01000002 Alphaproteobacteria Erythrobacter dokdonensis DSW-74 [LZYB] 41853 41778 - Val TAC [ENA] ¡û
>W1710064199 BCQA01000001 Alphaproteobacteria Bosea sp. BIWAKO-01 [BCQA] 4947201 4947126 - Val TAC [ENA] ¡û
>W1710074266 BCYV01000023 Alphaproteobacteria Novosphingobium capsulatum NBRC 12533 [BCYV] 39405 39330 - Val TAC [ENA] ¡û
>W1710074398 BCYY01000031 Alphaproteobacteria Sphingomonas pituitosa NBRC 102491 [BCYY] 10884 10809 - Val TAC [ENA] ¡û
>W1710501504 FMBM01000002 Alphaproteobacteria Saliniramus fredricksonii HL-109 [FMBM] 1577193 1577118 - Val TAC [ENA] ¡û
>W1710505286 FMTP01000001 Alphaproteobacteria Ancylobacter rudongensis [FMTP] 494302 494377 + Val TAC [ENA] ¡û
>W1710508004 FMVR01000010 Alphaproteobacteria Novosphingobium aromaticivorans stygium [FMVR] 69027 69102 + Val TAC [ENA] ¡û
>W1710538935 FNUY01000002 Alphaproteobacteria Bosea lathyri [FNUY] 532322 532397 + Val TAC [ENA] ¡û
>W1710548826 FOEB01000009 Alphaproteobacteria Methylobacterium sp. ap11 [FOEB] 188089 188164 + Val TAC [ENA] ¡û
>W1710566294 FORV01000006 Alphaproteobacteria Sphingomonas sp. NFR04 [FORV] 23272 23347 + Val TAC [ENA] ¡û
>W1710567159 FOSN01000002 Alphaproteobacteria Methylocapsa palsarum [FOSN] 333461 333536 + Val TAC [ENA] ¡û
>W1710598476 FTOA01000001 Alphaproteobacteria Insolitispirillum peregrinum [FTOA] 389333 389408 + Val TAC [ENA] ¡û
>W1710660465 JXTJ01000008 Alphaproteobacteria Bosea sp. WAO [JXTJ] 715327 715252 - Val TAC [ENA] ¡û
>W1710709755 LDRM01000009 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRM] 14650 14575 - Val TAC [ENA] ¡û
>W1710709823 LDRN01000015 Alphaproteobacteria Methylobacterium indicum aquaticum [LDRN] 39333 39408 + Val TAC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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