tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.33431 (86 seq.)
>W1710797156 LJSU01000023 Alphaproteobacteria Rhodobacteraceae bacterium HLUCCO07 [LJSU] 7407 7318 - Ser GCT [ENA] ¡û
>W1710987784 LPUY01000075 Alphaproteobacteria Tritonibacter horizontis O3.65 [LPUY] 134715 134626 - Ser GCT [ENA] ¡û
>W1711229277 LXYH01000007 Alphaproteobacteria Rhodobacteraceae bacterium EhC02 [LXYH] 2565 2476 - Ser GCT [ENA] ¡û
>W1711388537 MEHS01000004 Alphaproteobacteria Rhodobaca barguzinensis [MEHS] 2245529 2245618 + Ser GCT [ENA] ¡û
>W1711388567 MEHT01000009 Alphaproteobacteria Roseinatronobacter thiooxidans [MEHT] 400471 400560 + Ser GCT [ENA] ¡û
>W1711456288 MJAP01000018 Alphaproteobacteria Natronohydrobacter thiooxidans [MJAP] 52148 52059 - Ser GCT [ENA] ¡û
>W1711572432 MNBW01000003 Alphaproteobacteria Nioella nitratireducens [MNBW] 158411 158500 + Ser GCT [ENA] ¡û
>W1711709221 MSYQ01000001 Alphaproteobacteria Rhodovulum sulfidophilum [MSYQ] 483466 483555 + Ser GCT [ENA] ¡û
>W1711709265 MSYR01000001 Alphaproteobacteria Rhodovulum sulfidophilum [MSYR] 533598 533687 + Ser GCT [ENA] ¡û
>W1712085165 NHTQ01000007 Alphaproteobacteria Rhodobacteraceae bacterium WFHF2C18 [NHTQ] 167569 167480 - Ser GCT [ENA] ¡û
>WENV180298602 OBJA01466089 [OBJA] soil metagenome; sediment, water from around vicinity 204 115 - Ser GCT [ENA] ¡û
>WENV181233575 OFET01000009 [OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis 298606 298517 - Ser GCT [ENA] ¡û
>WENV181233760 OFET01000075 [OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis 155509 155598 + Ser GCT [ENA] ¡û
>WENV181234229 OFEU01000009 [OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium 298606 298517 - Ser GCT [ENA] ¡û
>WENV181234467 OFEU01000179 [OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium 61308 61397 + Ser GCT [ENA] ¡û
>WENV181390867 OFRQ01001281 [OFRQ] seawater metagenome; seawater 1795 1706 - Ser GCT [ENA] ¡û
>W141278739 JAFT01000005 Alphaproteobacteria Oceanicola sp. HL-35 [JAFT] 741244 741155 - Ser GCT [ENA] ¡û
>WENV183625973 OOGH01001273 [OOGH] marine metagenome; seawater 1795 1706 - Ser GCT [ENA] ¡û
>WENV183627859 OOGL01063455 [OOGL] marine metagenome; sea ice 228 139 - Ser GCT [ENA] ¡û
>ENV08000038 ABLU01069156 microbial fraction from oxidized sediments of the Soudan Mine (Minnesota) 22 111 + Ser GCT [ENA] ¡û
>WENV183720932 PDWJ01049677 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 2065 1976 - Ser GCT [ENA] ¡û
>WENV170015683 AZII01002760 [AZII] marine sediment metagenome; enrichment culture of sample MGS-BIZ(AMM) from oil contaminated site at the Bizerte 515 426 - Ser GCT [ENA] ¡û
>WENV170668324 LADL02002910 [LADL] rock porewater metagenome; Opalinus Clay rock porewater BRC-3 borehole 638 727 + Ser GCT [ENA] ¡û
>WENV170683059 LFIK01004087 [LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5 7171 7260 + Ser GCT [ENA] ¡û
>WENV170683491 LFIK01013155 [LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5 163 74 - Ser GCT [ENA] ¡û
>WENV170705192 LLEQ01000218 [LLEQ] bioreactor metagenome; day86 25degC chemostat 2012 inoculated with Wadden Sea sediment taken from the upper 2 cm of the 1985 1896 - Ser GCT [ENA] ¡û
>WENV170937112 MDTG01285977 [MDTG] marine metagenome; seawater 3460 3549 + Ser GCT [ENA] ¡û
>W1910443124 FWFU01000002 Alphaproteobacteria Roseovarius halotolerans CECT 8110 [FWFU] 119718 119629 - Ser GCT [ENA] ¡û
>W1911582623 PHNT01000007 Alphaproteobacteria Roseovarius sp. N53 [PHNT] 81158 81069 - Ser GCT [ENA] ¡û
>W1911638548 PVWS01000028 Alphaproteobacteria Roseovarius sp. A46 [PVWS] 19246 19157 - Ser GCT [ENA] ¡û
>W1911653478 QDFI01000049 Alphaproteobacteria Rhodobacteraceae bacterium LMIT002 [QDFI] 8516 8427 - Ser GCT [ENA] ¡û
>W1810061268 PDNI01000058 Alphaproteobacteria Roseovarius nitratireducens TFZ [PDNI] 218138 218227 + Ser GCT [ENA] ¡û
>W1810329446 PUHN01000002 Alphaproteobacteria Rhodobacteraceae bacterium WD3A24 [PUHN] 24864 24953 + Ser GCT [ENA] ¡û
>W1810494720 QBFD01000022 Alphaproteobacteria Sulfitobacter sp. DFL-14 [QBFD] 106756 106667 - Ser GCT [ENA] ¡û
>W1810543598 QDKM01000003 Alphaproteobacteria Pararhodobacter oceanensis AM505 [QDKM] 36019 35930 - Ser GCT [ENA] ¡û
>W1810685898 QKZQ01000001 Alphaproteobacteria Roseinatronobacter thiooxidans DSM 13087 [QKZQ] 401635 401724 + Ser GCT [ENA] ¡û
>W1810719949 QNQP01000022 Alphaproteobacteria Roseovarius dicentrarchi YLY04 [QNQP] 50405 50494 + Ser GCT [ENA] ¡û
>W1810721916 QNTQ01000026 Alphaproteobacteria Rhodosalinus halophilus E84 [QNTQ] 7578 7489 - Ser GCT [ENA] ¡û
>W1810722635 QNVJ01000038 Alphaproteobacteria Alkalilacustris brevis 34079 [QNVJ] 15294 15383 + Ser GCT [ENA] ¡û
>W1810733757 QOHR01000014 Alphaproteobacteria Rhodosalinus sediminis WDN1C137 [QOHR] 70022 69933 - Ser GCT [ENA] ¡û
>W2010406488 FWFU01000002 Alphaproteobacteria Roseovarius halotolerans CECT 8110 [FWFU] 119718 119629 - Ser GCT [ENA] ¡û
>W2010451985 JAAEAJ010000091 Alphaproteobacteria Rhodovulum sulfidophilum SE1 [JAAEAJ] 1059 1148 + Ser GCT [ENA] ¡û
>W2010569781 JAATOW010000060 Alphaproteobacteria Pseudooceanicola sp. HF7 [JAATOW] 7143 7232 + Ser GCT [ENA] ¡û
>W2010666459 JACBXS010000017 Alphaproteobacteria Rhodobacteraceae bacterium 2376 [JACBXS] 341 252 - Ser GCT [ENA] ¡û
>W2010727846 JACIGD010000002 Alphaproteobacteria Rhodobaca bogoriensis DSM 18756 LBB1 [JACIGD] 653643 653732 + Ser GCT [ENA] ¡û
>W2010774075 LIGK01000140 Alphaproteobacteria Salipiger aestuarii 328 [LIGK] 371 460 + Ser GCT [ENA] ¡û
>W2010774118 LIGL01000173 Alphaproteobacteria Salipiger aestuarii 329 [LIGL] 371 460 + Ser GCT [ENA] ¡û
>W2010774160 LIQE01000135 Alphaproteobacteria Salipiger aestuarii AD8 [LIQE] 1859 1770 - Ser GCT [ENA] ¡û
>W2011193360 PHNT01000007 Alphaproteobacteria Roseovarius sp. N53 [PHNT] 81158 81069 - Ser GCT [ENA] ¡û
>W2011230274 PVWS01000028 Alphaproteobacteria Roseovarius sp. A46 [PVWS] 19246 19157 - Ser GCT [ENA] ¡û
>W2011237037 QDFI01000049 Alphaproteobacteria Rhodobacteraceae bacterium LMIT002 [QDFI] 8516 8427 - Ser GCT [ENA] ¡û
>W2011353702 RAPE01000001 Alphaproteobacteria Roseovarius sp. HN-E21 [RAPE] 1369107 1369018 - Ser GCT [ENA] ¡û
>W2011389128 RBXI01000004 Alphaproteobacteria Roseovarius halotolerans DSM 29507 [RBXI] 801275 801364 + Ser GCT [ENA] ¡û
>W2011521812 RZWH01000005 Alphaproteobacteria Rhodobacteraceae bacterium CCMM004 [RZWH] 193800 193889 + Ser GCT [ENA] ¡û
>W2011555363 SELO01000020 Alphaproteobacteria Tropicimonas sp. IMCC6043 [SELO] 5235 5146 - Ser GCT [ENA] ¡û
>W2011641034 SMUV01000064 Alphaproteobacteria Ruegeria sp. 318-1 [SMUV] 147017 147106 + Ser GCT [ENA] ¡û
>W2011657681 SODJ01000002 Alphaproteobacteria Rhodobaca barguzinensis DSM 19920 [SODJ] 90656 90567 - Ser GCT [ENA] ¡û
>W2011665531 SORN01000002 Alphaproteobacteria Rhodobaca bogoriensis DSM 18756 [SORN] 616028 616117 + Ser GCT [ENA] ¡û
>W2011977442 VCNK01000043 Alphaproteobacteria Phaeobacter sp. B1627 [VCNK] 750 661 - Ser GCT [ENA] ¡û
>W2012022117 VFPT01000001 Alphaproteobacteria Roseinatronobacter monicus DSM 18423 [VFPT] 1125440 1125351 - Ser GCT [ENA] ¡û
>W2110447478 JAESIL010000017 Alphaproteobacteria Rhodovulum visakhapatnamense AB19 [JAESIL] 46968 46879 - Ser GCT [ENA] ¡û
>W2110447537 JAESIM010000045 Alphaproteobacteria Rhodovulum visakhapatnamense AB26 [JAESIM] 7289 7378 + Ser GCT [ENA] ¡û
>W2110447967 JAESJG010000036 Alphaproteobacteria Rhodovulum sulfidophilum AB22 [JAESJG] 25295 25384 + Ser GCT [ENA] ¡û
>W2110448021 JAESJH010000023 Alphaproteobacteria Rhodovulum sulfidophilum AB23 [JAESJH] 60256 60167 - Ser GCT [ENA] ¡û
>W2110494047 JAFFOB010000009 Alphaproteobacteria Roseitranquillus sediminis MCCB 386 [JAFFOB] 64258 64347 + Ser GCT [ENA] ¡û
>W2110566636 JAGQDH010000002 Alphaproteobacteria Roseovarius sp. SHN287 [JAGQDH] 87774 87863 + Ser GCT [ENA] ¡û
>C211381831 CP080623 Alphaproteobacteria Roseovarius sp. SCSIO 43702 [CP080623] 3268268 3268357 + Ser GCT - ¡û
>W2110751690 NHRZ01000018 Alphaproteobacteria Rhodovulum sulfidophilum IM796 [NHRZ] 74941 74852 - Ser GCT [ENA] ¡û
>C231636154 CP121113 Alphaproteobacteria Paracoccaceae bacterium S2 [CP121113] 2157285 2157374 + Ser GCT - ¡û
>C241035947 CP031598 Alphaproteobacteria Roseovarius indicus DSM 26383 [CP031598] 4200706 4200617 - Ser GCT - ¡û
>W2310026753 BSPU01000001 Alphaproteobacteria Sulfitobacter porphyrae NBRC 109054 [BSPU] 412726 412637 - Ser GCT [ENA] ¡û
>C161001441 AP014800 Alphaproteobacteria Rhodovulum sulfidophilum DSM 2351 [AP014800] 1205990 1206079 + Ser GCT [Ensembl] ¡û
>C161001483 AP014800 Alphaproteobacteria Rhodovulum sulfidophilum DSM 2351 [AP014800] 903583 903494 - Ser GCT [Ensembl] ¡û
>W1610190091 FBYC01000004 Alphaproteobacteria Roseibaca calidilacus HL-91 [FBYC] 1363301 1363212 - Ser GCT [ENA] ¡û
>W1610661113 LJSU01000023 Alphaproteobacteria Rhodobacteraceae bacterium HLUCCO07 [LJSU] 7407 7318 - Ser GCT [ENA] ¡û
>W1610842728 LPUY01000075 Alphaproteobacteria Tritonibacter horizontis O3.65 [LPUY] 134715 134626 - Ser GCT [ENA] ¡û
>W1611013147 LXYH01000007 Alphaproteobacteria Rhodobacteraceae bacterium EhC02 [LXYH] 2565 2476 - Ser GCT [ENA] ¡û
>WENV081118 ABEF01029239 Marine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA) 396 305 - Ser GCT [ENA]
>W1710083065 BDIY01000021 Alphaproteobacteria Roseovarius sp. A-2 [BDIY] 3571 3660 + Ser GCT [ENA] ¡û
>W1710191707 FBYC01000004 Alphaproteobacteria Roseibaca calidilacus HL-91 [FBYC] 1363301 1363212 - Ser GCT [ENA] ¡û
>W1710515029 FNBL01000003 Alphaproteobacteria Celeribacter baekdonensis [FNBL] 190501 190590 + Ser GCT [ENA] ¡û
>W1710524238 FNIO01000004 Alphaproteobacteria Lutimaribacter pacificus [FNIO] 328660 328749 + Ser GCT [ENA] ¡û
>W1710543612 FOAC01000003 Alphaproteobacteria Roseovarius nanhaiticus [FOAC] 84512 84601 + Ser GCT [ENA] ¡û
>W1710589249 FQZZ01000004 Alphaproteobacteria Lutimaribacter pacificus [FQZZ] 70282 70193 - Ser GCT [ENA] ¡û
>W1710591907 FRCB01000006 Alphaproteobacteria Roseovarius litoreus [FRCB] 146312 146401 + Ser GCT [ENA] ¡û
>W1710598220 FTNV01000002 Alphaproteobacteria Roseovarius nanhaiticus [FTNV] 519802 519713 - Ser GCT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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