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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
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1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.339744 (67 seq.)
>W1710809607
LKEQ01000009
Alphaproteobacteria
Wolbachia endosymbiont of Trichogramma pretiosum [LKEQ]
173495
173567
+
Gln
TTG
[ENA]
¡û
>W1711055048
LRUH01000029
Alphaproteobacteria
Wolbachia endosymbiont of Laodelphax striatellus of Laodelphax striatella [LRUH]
4032
3960
-
Gln
TTG
[ENA]
¡û
>W1711088452
LSYX01000102
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYX]
8785
8859
+
Gln
TTG
[ENA]
¡û
>W1711088484
LSYY01000123
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYY]
28526
28454
-
Gln
TTG
[ENA]
¡û
>W1711258815
LYUV01000012
Alphaproteobacteria
Wolbachia endosymbiont of Nomada leucophthalma [LYUV]
15592
15518
-
Gln
TTG
[ENA]
¡û
>W1711258849
LYUW01000011
Alphaproteobacteria
Wolbachia endosymbiont of Nomada flava [LYUW]
15592
15518
-
Gln
TTG
[ENA]
¡û
>W1711258881
LYUX01000009
Alphaproteobacteria
Wolbachia endosymbiont of Nomada panzeri [LYUX]
15593
15519
-
Gln
TTG
[ENA]
¡û
>W1711258931
LYUY01000053
Alphaproteobacteria
Wolbachia endosymbiont of Nomada ferruginata [LYUY]
1559
1485
-
Gln
TTG
[ENA]
¡û
>W1711745707
MUJL01000074
Alphaproteobacteria
Wolbachia pipientis wUni [MUJL]
841
767
-
Gln
TTG
[ENA]
¡û
>W1711745740
MUJM01000066
Alphaproteobacteria
Wolbachia pipientis wVitA [MUJM]
1162
1088
-
Gln
TTG
[ENA]
¡û
>W131052811
AMZJ01000049
Alphaproteobacteria
Wolbachia endosymbiont of Diaphorina citri [AMZJ]
1515
1587
+
Gln
TTG
[ENA]
¡û
>W131242632
CAOH01000072
Alphaproteobacteria
Wolbachia pipientis wBol1-b [CAOH]
1104
1032
-
Gln
TTG
[ENA]
¡û
>W131243111
CAOU02000027
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila suzukii str. valsugana of Drosophila suzukii [CAOU]
23434
23360
-
Gln
TTG
[ENA]
¡û
>C026847
AE017196
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila melanogaster wMel [AE017196]
793628
793554
-
Gln
TTG
[Ensembl]
¡û
>C026867
AE017321
Alphaproteobacteria
Wolbachia endosymbiont strain TRS of Brugia malayi [AE017321]
1007008
1006934
-
Gln
TTG
[Ensembl]
¡û
>w005430
AAGC01000279
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans [AAGC]
1043
967
-
Gln
TTG
[ENA]
¡û
>w005411
AAGB01000120
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae [AAGB]
989
1065
+
Gln
TTG
[ENA]
¡û
>W141065632
AQQE01000050
Alphaproteobacteria
Wolbachia pipientis wMelPop [AQQE]
1553
1479
-
Gln
TTG
[ENA]
¡û
>WENV181405252
OGCC01001847
[OGCC] insect metagenome; haemolymph
313
387
+
Gln
TTG
[ENA]
¢þ
>WENV181405305
OGCD01000323
[OGCD] insect metagenome; haemolymph
2353
2427
+
Gln
TTG
[ENA]
¢þ
>WENV181406122
OGCF01008212
[OGCF] insect metagenome; haemolymph
990
916
-
Gln
TTG
[ENA]
¢þ
>W141145081
AWUH01000072
Alphaproteobacteria
Wolbachia endosymbiont of Glossina morsitans morsitans [AWUH]
934
860
-
Gln
TTG
[ENA]
¡û
>W141240235
CAGB01000145
Alphaproteobacteria
Wolbachia pipientis wAlbB [CAGB]
5399
5471
+
Gln
TTG
[ENA]
¡û
>C08011424
AM999887
Alphaproteobacteria
Wolbachia endosymbiont of Culex quinquefasciatus Pel wPip [AM999887]
578960
578888
-
Gln
TTG
[Ensembl]
¡û
>C191074347
CP031221
Alphaproteobacteria
Wolbachia pipientis wAlbB [CP031221]
184172
184100
-
Gln
TTG
-
¡û
>C191123115
CP034333
Alphaproteobacteria
Wolbachia endosymbiont of Brugia malayi [CP034333]
339531
339458
-
Gln
TTG
-
¡û
>C191123147
CP034334
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila mauritiana wMau [CP034334]
1147871
1147799
-
Gln
TTG
-
¡û
>C191123181
CP034335
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila mauritiana wMau [CP034335]
1147874
1147802
-
Gln
TTG
-
¡û
>C191188724
CP041215
Alphaproteobacteria
Wolbachia endosymbiont of Carposina sasakii [CP041215]
1266455
1266381
-
Gln
TTG
-
¡û
>W09113871
ABZA01000003
Alphaproteobacteria
Wolbachia endosymbiont of Culex quinquefasciatus of Culex quinquefasciatus JHB [ABZA]
120004
119932
-
Gln
TTG
[ENA]
¡û
>W09121805
ACFP01000055
Alphaproteobacteria
Wolbachia endosymbiont of Muscidifurax uniraptor [ACFP]
842
768
-
Gln
TTG
[ENA]
¡û
>W141812282
JQAM01000024
Alphaproteobacteria
Wolbachia pipientis [JQAM]
61721
61647
-
Gln
TTG
[ENA]
¡û
>W1910213463
FMKF01000047
Alphaproteobacteria
Wolbachia endosymbiont of Bemisia tabaci [FMKF]
6251
6323
+
Gln
TTG
[ENA]
¡û
>C09111276
CP001391
Alphaproteobacteria
Wolbachia sp. wRi [CP001391]
853907
853833
-
Gln
TTG
[Ensembl]
¡û
>W1910753953
MKIF01000042
Alphaproteobacteria
Wolbachia sp. wRi [MKIF]
525
599
+
Gln
TTG
[ENA]
¡û
>W1910759035
MLZJ01000121
Alphaproteobacteria
Wolbachia sp. wMel_KL [MLZJ]
1245
1171
-
Gln
TTG
[ENA]
¡û
>W1910760281
MNCG01000122
Alphaproteobacteria
Wolbachia sp. wMel_AMD [MNCG]
1245
1171
-
Gln
TTG
[ENA]
¡û
>W1910794377
MRWX01000064
Alphaproteobacteria
Wolbachia pipientis wAus [MRWX]
706
778
+
Gln
TTG
[ENA]
¡û
>W1910802359
MSYL01000198
Alphaproteobacteria
Wolbachia sp. wRi_2 [MSYL]
289
363
+
Gln
TTG
[ENA]
¡û
>W1911239475
NSDR01000116
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_India [NSDR]
17205
17131
-
Gln
TTG
[ENA]
¡û
>W1911239488
NSDS01000033
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_Hawaii [NSDS]
1425
1351
-
Gln
TTG
[ENA]
¡û
>W1911239532
NSDT01000083
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_Indonesia [NSDT]
17205
17131
-
Gln
TTG
[ENA]
¡û
>W1911281111
NTHL01000060
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila subpulchrella of Drosophila subpulchrella wSpc [NTHL]
23416
23342
-
Gln
TTG
[ENA]
¡û
>W1911412151
NWVH01000039
Alphaproteobacteria
Wolbachia pipientis FL2016 [NWVH]
1161
1089
-
Gln
TTG
[ENA]
¡û
>W1911412198
NWVI01000087
Alphaproteobacteria
Wolbachia pipientis HN2016 [NWVI]
5413
5485
+
Gln
TTG
[ENA]
¡û
>W1911412257
NWVJ01000099
Alphaproteobacteria
Wolbachia pipientis HN2016 [NWVJ]
1077
1003
-
Gln
TTG
[ENA]
¡û
>W1911412288
NWVK01000088
Alphaproteobacteria
Wolbachia pipientis FL2016 [NWVK]
1077
1003
-
Gln
TTG
[ENA]
¡û
>W1911545129
OUNE01000212
Alphaproteobacteria
Wolbachia endosymbiont of Aleurodicus dispersus WBAD (OUNE) of Aleurodicus dispersus WBAD [OUNE]
1018
946
-
Gln
TTG
[ENA]
¡û
>W1911545137
OUNF01000019
Alphaproteobacteria
Wolbachia endosymbiont of Aleurodicus floccissimus WBAF (OUNF) of Aleurodicus floccissimus WBAF [OUNF]
9928
10000
+
Gln
TTG
[ENA]
¡û
>W1810758328
QPIP01000003
Alphaproteobacteria
Wolbachia endosymbiont of Cylisticus convexus of Cylisticus convexus Wcon [QPIP]
3247
3321
+
Gln
TTG
[ENA]
¡û
>C151001152
AP013028
Alphaproteobacteria
Wolbachia endosymbiont of Cimex lectularius wCle [AP013028]
149247
149173
-
Gln
TTG
[Ensembl]
¡û
>C151102225
LK055284
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wAu [LK055284]
792743
792669
-
Gln
TTG
[Ensembl]
¡û
>W1510562618
CTEH01000002
Alphaproteobacteria
Wolbachia endosymbiont of Culex molestus wPip_Mol of Culex molestus [CTEH]
80553
80481
-
Gln
TTG
[ENA]
¡û
>W1511183971
JMCJ01000851
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus of Dactylopius coccus wCoc1 [JMCJ]
265
337
+
Gln
TTG
[ENA]
¡û
>W1511536223
JYPC01000032
Alphaproteobacteria
Wolbachia endosymbiont of Operophtera brumata of Operophtera brumata Ob_Wba [JYPC]
1061
989
-
Gln
TTG
[ENA]
¡û
>W11145935
AERW01000126
Alphaproteobacteria
Wolbachia endosymbiont of Nasonia vitripennis wVitB of Nasonia vitripennis [AERW]
1085
1013
-
Gln
TTG
[ENA]
¡û
>W11185749
CACK01000127
Alphaproteobacteria
Wolbachia endosymbiont of Culex pipiens molestus [CACK]
492
564
+
Gln
TTG
[ENA]
¡û
>C131009134
CP003883
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wNo [CP003883]
426457
426385
-
Gln
TTG
[Ensembl]
¡û
>C131009163
CP003884
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wHa [CP003884]
826803
826729
-
Gln
TTG
[Ensembl]
¡û
>W1610673713
LKEQ01000009
Alphaproteobacteria
Wolbachia endosymbiont of Trichogramma pretiosum [LKEQ]
173495
173567
+
Gln
TTG
[ENA]
¡û
>W1610896094
LRUH01000029
Alphaproteobacteria
Wolbachia endosymbiont of Laodelphax striatellus of Laodelphax striatella [LRUH]
4032
3960
-
Gln
TTG
[ENA]
¡û
>W1610922991
LSYX01000102
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYX]
8785
8859
+
Gln
TTG
[ENA]
¡û
>W1610923023
LSYY01000123
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYY]
28526
28454
-
Gln
TTG
[ENA]
¡û
>W1611021080
LYUV01000012
Alphaproteobacteria
Wolbachia endosymbiont of Nomada leucophthalma [LYUV]
15592
15518
-
Gln
TTG
[ENA]
¡û
>W1611021114
LYUW01000011
Alphaproteobacteria
Wolbachia endosymbiont of Nomada flava [LYUW]
15592
15518
-
Gln
TTG
[ENA]
¡û
>W1611021146
LYUX01000009
Alphaproteobacteria
Wolbachia endosymbiont of Nomada panzeri [LYUX]
15593
15519
-
Gln
TTG
[ENA]
¡û
>W1611021196
LYUY01000053
Alphaproteobacteria
Wolbachia endosymbiont of Nomada ferruginata [LYUY]
1559
1485
-
Gln
TTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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