This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.37108 (10 seq.)
>W141251992
CBRA020000065
Bacillota
Paenibacillus sp. P22 [CBRA]
12685
12597
-
Ser
TGA
[ENA]
¡û
>WENV170967824
MTKW01003679
[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
36230
36318
+
Ser
TGA
[ENA]
¢þ
>C151024057
CP007452
Bacillota
Peptoclostridium acidaminophilum DSM 3953 [CP007452]
54464
54552
+
Ser
TGA
[Ensembl]
¡û
>C151024081
CP007452
Bacillota
Peptoclostridium acidaminophilum DSM 3953 [CP007452]
194273
194361
+
Ser
TGA
[Ensembl]
¡û
>W1511705897
LGSS01000023
Bacillota
Gottschalkia purinilytica DSM 1384 [LGSS]
678
766
+
Ser
TGA
[ENA]
¡û
>W1511705925
LGSS01000073
Bacillota
Gottschalkia purinilytica DSM 1384 [LGSS]
261
173
-
Ser
TGA
[ENA]
¡û
>C131003078
CP003326
Bacillota
Gottschalkia acidurici 9a [CP003326]
1009134
1009222
+
Ser
TGA
[Ensembl]
¡û
>C131003094
CP003326
Bacillota
Gottschalkia acidurici 9a [CP003326]
1010787
1010875
+
Ser
TGA
[Ensembl]
¡û
>C131003114
CP003326
Bacillota
Gottschalkia acidurici 9a [CP003326]
3016216
3016128
-
Ser
TGA
[Ensembl]
¡û
>W1710082575
BDHH01000006
Bacillota
Fusibacter sp. 3D3 [BDHH]
2443
2531
+
Ser
TGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK