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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.3952 (4 seq.)
>W1810861771
QTUC01000001
Actinomycetota
Thermasporomyces composti DSM 22891 [QTUC]
1765777
1765869
+
Sec
TCA
[ENA]
¡û
>W2010667818
JACBZA010000001
Actinomycetota
Actinopolymorpha cephalotaxi DSM 45117 [JACBZA]
6648164
6648070
-
SeC
TCA
[ENA]
¡û
>W2010668189
JACBZH010000001
Actinomycetota
Actinopolymorpha rutila DSM 18448 [JACBZH]
788729
788635
-
SeC
TCA
[ENA]
¡û
>W1710561677
FOOI01000013
Actinomycetota
Actinopolymorpha cephalotaxi [FOOI]
41879
41785
-
SeC
TCA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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