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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.411995 (6 seq.)
>W1711069079
LSFI01000010
Thermodesulfobacteriota
Thermodesulfatator autotrophicus [LSFI]
3255
3181
-
Gln
CTG
[ENA]
¡û
>W1711183709
LWLG01000001
Thermodesulfobacteriota
Thermosulfurimonas dismutans [LWLG]
150239
150165
-
Gln
CTG
[ENA]
¡û
>W131218013
ATXH01000018
Thermodesulfobacteriota
Thermodesulfatator atlanticus DSM 21156 [ATXH]
10721
10647
-
Gln
CTG
[ENA]
¡û
>C11122767
CP002683
Thermodesulfobacteriota
Thermodesulfatator indicus DSM 15286 [CP002683]
1643430
1643356
-
Gln
CTG
[Ensembl]
¡û
>W1610909649
LSFI01000010
Thermodesulfobacteriota
Thermodesulfatator autotrophicus [LSFI]
3255
3181
-
Gln
CTG
[ENA]
¡û
>W1610989603
LWLG01000001
Thermodesulfobacteriota
Thermosulfurimonas dismutans [LWLG]
150239
150165
-
Gln
CTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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