Select
|
Sequence ID |
Genome ID (or Accession No.) |
Phylum/Class (Sample source for ENV) |
Species |
Start |
End |
Direction |
AA |
Anticodon |
Genome/Seq. Info. |
Decision |
Identical group No.452924 (226 seq.) |
|
>W1710867071 |
LMHZ01000007 |
Betaproteobacteria |
Noviherbaspirillum sp. Root189 [LMHZ] |
130610 |
130685 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1711076450 |
LSLI01000135 |
Betaproteobacteria |
Candidatus Gallionella acididurans [LSLI] |
1980 |
2055 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1711430698 |
MIJG01000001 |
Betaproteobacteria |
Herbaspirillum camelliae WT00C [MIJG] |
1302489 |
1302564 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1711430704 |
MIJG01000001 |
Betaproteobacteria |
Herbaspirillum camelliae WT00C [MIJG] |
676567 |
676492 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W1711430709 |
MIJG01000001 |
Betaproteobacteria |
Herbaspirillum camelliae WT00C [MIJG] |
3521 |
3446 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W1711765094 |
MUXB01000018 |
Betaproteobacteria |
Herbaspirillum sp. VT-16-41 [MUXB] |
2205 |
2280 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1712102759 |
NINW01000044 |
Betaproteobacteria |
Pigmentiphaga sp. NML080357 [NINW] |
2169 |
2244 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1712110290 |
NJGU01000026 |
Betaproteobacteria |
Herbaspirillum robiniae HZ10 [NJGU] |
3637 |
3562 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W1712110327 |
NJGV01000018 |
Betaproteobacteria |
Herbaspirillum aquaticum [NJGV] |
3507 |
3432 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>C171021199 |
CP013136 |
Betaproteobacteria |
Herbaspirillum seropedicae AU14040 [CP013136] |
511114 |
511189 |
+ |
Ala |
TGC |
- |
¡û |
|
>C171021222 |
CP013136 |
Betaproteobacteria |
Herbaspirillum seropedicae AU14040 [CP013136] |
5337792 |
5337717 |
- |
Ala |
TGC |
- |
¡û |
|
>C171021227 |
CP013136 |
Betaproteobacteria |
Herbaspirillum seropedicae AU14040 [CP013136] |
4371722 |
4371647 |
- |
Ala |
TGC |
- |
¡û |
|
>C171083829 |
CP018787 |
Betaproteobacteria |
Oxalobacter formigenes HC-1 [CP018787] |
2467709 |
2467634 |
- |
Ala |
TGC |
- |
¡û |
|
>C171083831 |
CP018787 |
Betaproteobacteria |
Oxalobacter formigenes HC-1 [CP018787] |
2373293 |
2373218 |
- |
Ala |
TGC |
- |
¡û |
|
>C171085362 |
CP018845 |
Betaproteobacteria |
Herbaspirillum robiniae AA6 [CP018845] |
3704967 |
3705042 |
+ |
Ala |
TGC |
- |
¡û |
|
>C171085366 |
CP018845 |
Betaproteobacteria |
Herbaspirillum robiniae AA6 [CP018845] |
4301477 |
4301552 |
+ |
Ala |
TGC |
- |
¡û |
|
>C171085369 |
CP018845 |
Betaproteobacteria |
Herbaspirillum robiniae AA6 [CP018845] |
4643420 |
4643495 |
+ |
Ala |
TGC |
- |
¡û |
|
>C171094241 |
CP019430 |
Betaproteobacteria |
Oxalobacter formigenes OXCC13 [CP019430] |
2369715 |
2369640 |
- |
Ala |
TGC |
- |
¡û |
|
>C171094243 |
CP019430 |
Betaproteobacteria |
Oxalobacter formigenes OXCC13 [CP019430] |
2275297 |
2275222 |
- |
Ala |
TGC |
- |
¡û |
|
>C171130518 |
LT671418 |
Betaproteobacteria |
Herminiimonas arsenitoxidans AS8 [LT671418] |
2160269 |
2160194 |
- |
Ala |
TGC |
- |
¡û |
|
>C171130521 |
LT671418 |
Betaproteobacteria |
Herminiimonas arsenitoxidans AS8 [LT671418] |
1854740 |
1854665 |
- |
Ala |
TGC |
- |
¡û |
|
>W131046025 |
AMSA01000011 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans Os45 [AMSA] |
196204 |
196279 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W131046091 |
AMSB01000038 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans Os34 [AMSB] |
2208 |
2283 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W131062286 |
ANJR01000020 |
Betaproteobacteria |
Herbaspirillum huttiense subsp. putei IAM 15032 [ANJR] |
160112 |
160187 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W131062297 |
ANJR01000027 |
Betaproteobacteria |
Herbaspirillum huttiense subsp. putei IAM 15032 [ANJR] |
66418 |
66343 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W131161546 |
AQXU01000006 |
Betaproteobacteria |
Leeia oryzae DSM 17879 [AQXU] |
1901 |
1976 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>C010351 |
CU207211 |
Betaproteobacteria |
Herminiimonas arsenicoxydans [CU207211] |
204573 |
204648 |
+ |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C010354 |
CU207211 |
Betaproteobacteria |
Herminiimonas arsenicoxydans [CU207211] |
576808 |
576883 |
+ |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C011105 |
CP000269 |
Betaproteobacteria |
Janthinobacterium sp. Marseille [CP000269] |
261438 |
261513 |
+ |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C011108 |
CP000269 |
Betaproteobacteria |
Janthinobacterium sp. Marseille [CP000269] |
632238 |
632313 |
+ |
Ala |
TGC |
[Ensembl] |
¡û |
|
>WENV180026685 |
FTIU01022301 |
[FTIU] metagenome; soil |
|
75 |
150 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV180026741 |
FTIU01067306 |
[FTIU] metagenome; soil |
|
1600 |
1525 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV180030159 |
FTJL01237371 |
[FTJL] metagenome; soil |
|
1141 |
1066 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV180032705 |
FTKD01000020 |
[FTKD] metagenome; soil |
|
111754 |
111679 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV180032844 |
FTKD01001697 |
[FTKD] metagenome; soil |
|
2366 |
2291 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV180033122 |
FTKD01411761 |
[FTKD] metagenome; soil |
|
24093 |
24168 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV180033759 |
FTKL01106294 |
[FTKL] metagenome; soil |
|
776 |
701 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV180035841 |
FTLB01022849 |
[FTLB] metagenome; soil |
|
180 |
255 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV180035903 |
FTLB01046262 |
[FTLB] metagenome; soil |
|
484 |
409 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>W141003853 |
AEEC02000072 |
Betaproteobacteria |
Herbaspirillum frisingense GSF30 [AEEC] |
3256 |
3181 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>WENV180099554 |
NMRC01017082 |
[NMRC] plant metagenome; fluid collected inside the plant's pitcher |
|
598 |
673 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV180247212 |
OBEQ010006617 |
[OBEQ] groundwater metagenome; groundwater |
|
693 |
768 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV180341179 |
OBLI01088354 |
[OBLI] pig gut metagenome; faeces |
|
91 |
166 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV180344469 |
OBLL01004365 |
[OBLL] soil metagenome; soil |
|
349 |
424 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV180851096 |
ODKV01025300 |
[ODKV] human metagenome; G_DNA_Stool |
|
1429 |
1354 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>W141093957 |
AVCC01000013 |
Betaproteobacteria |
Herminiimonas sp. CN [AVCC] |
58245 |
58170 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>WENV181149493 |
OEHT01094354 |
[OEHT] human metagenome; G_DNA_Stool |
|
227 |
302 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV181323498 |
OFKY01002038 |
[OFKY] marine metagenome; sea ice |
|
316 |
391 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV181369597 |
OFQP01010288 |
[OFQP] freshwater metagenome; Freshwater Lake |
|
905 |
830 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV181372810 |
OFQX01006274 |
[OFQX] wastewater metagenome; WWTP Novara (Effluent) |
|
41 |
116 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV181447776 |
OGDU01042022 |
[OGDU] metagenome; Human gut stool |
|
613 |
538 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV181451900 |
OGDY01030201 |
[OGDY] metagenome; Human gut stool |
|
17 |
92 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV181835484 |
OGVI01001584 |
[OGVI] freshwater metagenome; freshwater |
|
23 |
98 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV181836760 |
OGVJ01027572 |
[OGVJ] freshwater metagenome; freshwater |
|
573 |
498 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV181839546 |
OGVO01003056 |
[OGVO] freshwater metagenome; freshwater |
|
657 |
732 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV181844258 |
OGVV01030813 |
[OGVV] freshwater metagenome; freshwater |
|
107 |
182 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV181884107 |
OGXI01040431 |
[OGXI] human gut metagenome; faeces |
|
794 |
719 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV181902589 |
OGXW01045884 |
[OGXW] human gut metagenome; faeces |
|
862 |
787 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV181913639 |
OGYE01015983 |
[OGYE] human gut metagenome; faeces |
|
240 |
315 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV181916226 |
OGYF01067665 |
[OGYF] human gut metagenome; faeces |
|
611 |
536 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV181926309 |
OGYM01080240 |
[OGYM] human gut metagenome; faeces |
|
123 |
198 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV181929724 |
OGYO01057696 |
[OGYO] human gut metagenome; faeces |
|
669 |
594 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>W141194234 |
AYSW01000022 |
Betaproteobacteria |
Robbsia andropogonis Ba3549 [AYSW] |
20750 |
20675 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>WENV181973434 |
OHAA01046211 |
[OHAA] human gut metagenome; faeces |
|
41 |
116 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV181977381 |
OHAD01064711 |
[OHAD] human gut metagenome; faeces |
|
611 |
536 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV181992421 |
OHAQ01055928 |
[OHAQ] human gut metagenome; faeces |
|
211 |
286 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV181998299 |
OHAU01048927 |
[OHAU] human gut metagenome; faeces |
|
241 |
316 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV182009872 |
OHBJ01064698 |
[OHBJ] human gut metagenome; faeces |
|
577 |
502 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>W141223397 |
BADF01000061 |
Betaproteobacteria |
Herbaspirillum sp. B39 [BADF] |
2023 |
2098 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W141223412 |
BADF01000695 |
Betaproteobacteria |
Herbaspirillum sp. B39 [BADF] |
385 |
310 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W141223513 |
BADI01001150 |
Betaproteobacteria |
Herbaspirillum sp. B65 [BADI] |
6116 |
6041 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W141223540 |
BADJ01000803 |
Betaproteobacteria |
Herbaspirillum sp. B501 [BADJ] |
35909 |
35834 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W141241306 |
CAHF01000002 |
Betaproteobacteria |
Noviherbaspirillum massiliense JC206 [CAHF] |
3529 |
3454 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W141258895 |
CBXX010000006 |
Betaproteobacteria |
Herbaspirillum sp. RV1423 [CBXX] |
260174 |
260249 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>WENV182609416 |
OJJV01007597 |
[OJJV] metagenome; faeces |
|
2306 |
2231 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV182653067 |
OJMH01092860 |
[OJMH] human gut metagenome; feces |
|
540 |
465 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV182655888 |
OJMI01106953 |
[OJMI] human gut metagenome; feces |
|
77 |
152 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV182885938 |
OKSC01048808 |
[OKSC] human gut metagenome; faeces |
|
235 |
310 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183034179 |
OLFY01064123 |
[OLFY] human gut metagenome; faeces |
|
604 |
529 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183037721 |
OLGA01061747 |
[OLGA] human gut metagenome; faeces |
|
234 |
309 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183085611 |
OLJF01006933 |
[OLJF] metagenome; faeces |
|
328 |
403 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183131601 |
OLOA01077961 |
[OLOA] human gut metagenome; faeces |
|
512 |
437 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183316351 |
OLVS01025714 |
[OLVS] human gut metagenome; feces |
|
95 |
170 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183342557 |
OLWN01034383 |
[OLWN] human gut metagenome; feces |
|
566 |
491 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183575915 |
OOCI01012464 |
[OOCI] human gut metagenome; human gut |
|
2259 |
2184 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183614520 |
OODW01000007 |
[OODW] marine metagenome; sea ice |
|
3896 |
3821 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183617988 |
OOFL01000960 |
[OOFL] marine metagenome; seawater |
|
1017 |
942 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183655728 |
OQWD01064575 |
[OQWD] human gut metagenome; human gut |
|
31 |
106 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183661908 |
ORJL010147640 |
[ORJL] groundwater metagenome; groundwater |
|
725 |
650 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183697681 |
OUNK010017618 |
[OUNK] metagenome; soil |
|
1190 |
1115 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183703706 |
PDVJ01037001 |
[PDVJ] alkali sediment metagenome; glacial lake sediment |
|
403 |
478 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183727872 |
PJTP01002188 |
[PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment |
|
1274 |
1199 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183730198 |
PJTR01003215 |
[PJTR] soil metagenome; Soil (2) enriched on wood chips: beechwood xylan treatment |
|
621 |
546 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183731106 |
PJTS01009527 |
[PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment |
|
610 |
535 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183733473 |
PJTY01002594 |
[PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment |
|
2362 |
2287 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183734683 |
PJTZ01039493 |
[PJTZ] soil metagenome; Soil enriched (2) on filter paper |
|
301 |
376 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183735210 |
PJUA01003097 |
[PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment |
|
2039 |
2114 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183735872 |
PJUB01006994 |
[PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment |
|
568 |
493 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183735934 |
PJUB01013944 |
[PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment |
|
27 |
102 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183736525 |
PJUC01008816 |
[PJUC] soil metagenome; Soil enriched on filter paper |
|
599 |
524 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183739235 |
PJUE01004204 |
[PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment |
|
1977 |
1902 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183743624 |
PJUJ01011544 |
[PJUJ] feces metagenome; Chicken feces enriched on filter paper: beechwood xylan treatment |
|
610 |
685 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV183744333 |
PJUK01008578 |
[PJUK] feces metagenome; Chicken feces enriched on filter paper: alkali lignin treatment |
|
239 |
164 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>ENV08001380 |
ABMX01000163 |
fish metagenome; microbial fraction from gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease |
|
77 |
2 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>ENV08001390 |
ABMX01006822 |
fish metagenome; microbial fraction from gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease |
|
2 |
77 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>ENV08001397 |
ABMY01000637 |
fish metagenome; microbial fraction from gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish were sick at time of sampling |
|
74 |
1 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>ENV08001438 |
ABNA01004286 |
fish metagenome; microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish were sick at time of sampling |
|
18 |
93 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>WENV170008322 |
ANMQ01000125 |
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp) |
|
2426 |
2501 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV170071305 |
CDZQ01052295 |
[CDZQ] gut metagenome; human stools |
|
1343 |
1268 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV170557696 |
CXWL01034333 |
[CXWL] groundwater metagenome; biofilm material |
|
288 |
363 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV170573214 |
FLYJ01005362 |
[FLYJ] hot springs metagenome; Sediment |
|
1993 |
2068 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV170634927 |
JAHE01131095 |
[JAHE] sediment metagenome; lake sediment |
|
568 |
493 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV170659138 |
JXWR01000449 |
[JXWR] soil metagenome; rice field; ambient CO2 |
|
264 |
339 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV170662752 |
JXWW01161962 |
[JXWW] soil metagenome; rice field; organic GM Plot |
|
346 |
421 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV170684501 |
LFRM01043215 |
[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle |
|
368 |
443 |
+ |
Ala |
TGC |
[ENA] |
¢þ |
|
>WENV170714464 |
LNFM01075057 |
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant |
|
1493 |
1418 |
- |
Ala |
TGC |
[ENA] |
¢þ |
|
>C181071820 |
CP022736 |
Betaproteobacteria |
Herbaspirillum sp. meg3 [CP022736] |
50337 |
50412 |
+ |
Ala |
TGC |
- |
¡û |
|
>C181071825 |
CP022736 |
Betaproteobacteria |
Herbaspirillum sp. meg3 [CP022736] |
981364 |
981439 |
+ |
Ala |
TGC |
- |
¡û |
|
>C181071850 |
CP022736 |
Betaproteobacteria |
Herbaspirillum sp. meg3 [CP022736] |
4964575 |
4964500 |
- |
Ala |
TGC |
- |
¡û |
|
>C191004587 |
AP018738 |
Betaproteobacteria |
Ferriphaselus amnicola OYT1 [AP018738] |
2624408 |
2624333 |
- |
Ala |
TGC |
- |
¡û |
|
>C191004600 |
AP018738 |
Betaproteobacteria |
Ferriphaselus amnicola OYT1 [AP018738] |
1631822 |
1631747 |
- |
Ala |
TGC |
- |
¡û |
|
>C191004604 |
AP018738 |
Betaproteobacteria |
Ferriphaselus amnicola OYT1 [AP018738] |
1497279 |
1497204 |
- |
Ala |
TGC |
- |
¡û |
|
>C191029330 |
CP024996 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans DSM 11543 [CP024996] |
548748 |
548823 |
+ |
Ala |
TGC |
- |
¡û |
|
>C191029353 |
CP024996 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans DSM 11543 [CP024996] |
5530509 |
5530434 |
- |
Ala |
TGC |
- |
¡û |
|
>C191029358 |
CP024996 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans DSM 11543 [CP024996] |
4608004 |
4607929 |
- |
Ala |
TGC |
- |
¡û |
|
>C191116940 |
CP033966 |
Betaproteobacteria |
Pigmentiphaga sp. H8 [CP033966] |
1759981 |
1760056 |
+ |
Ala |
TGC |
- |
¡û |
|
>C191116956 |
CP033966 |
Betaproteobacteria |
Pigmentiphaga sp. H8 [CP033966] |
4997427 |
4997352 |
- |
Ala |
TGC |
- |
¡û |
|
>C191124227 |
CP034395 |
Betaproteobacteria |
Herbaspirillum seropedicae AU13965 [CP034395] |
507385 |
507460 |
+ |
Ala |
TGC |
- |
¡û |
|
>C191124250 |
CP034395 |
Betaproteobacteria |
Herbaspirillum seropedicae AU13965 [CP034395] |
5271544 |
5271469 |
- |
Ala |
TGC |
- |
¡û |
|
>C191124255 |
CP034395 |
Betaproteobacteria |
Herbaspirillum seropedicae AU13965 [CP034395] |
4313179 |
4313104 |
- |
Ala |
TGC |
- |
¡û |
|
>C191138932 |
CP035311 |
Betaproteobacteria |
Janthinobacterium sp. 17J80-10 [CP035311] |
3882418 |
3882343 |
- |
Ala |
TGC |
- |
¡û |
|
>C191138935 |
CP035311 |
Betaproteobacteria |
Janthinobacterium sp. 17J80-10 [CP035311] |
3186623 |
3186548 |
- |
Ala |
TGC |
- |
¡û |
|
>C191138938 |
CP035311 |
Betaproteobacteria |
Janthinobacterium sp. 17J80-10 [CP035311] |
2791096 |
2791021 |
- |
Ala |
TGC |
- |
¡û |
|
>C191156636 |
CP037993 |
Betaproteobacteria |
Herbaspirillum huttiense NFYY 53159 [CP037993] |
5600695 |
5600620 |
- |
Ala |
TGC |
- |
¡û |
|
>C191156638 |
CP037993 |
Betaproteobacteria |
Herbaspirillum huttiense NFYY 53159 [CP037993] |
5594932 |
5594857 |
- |
Ala |
TGC |
- |
¡û |
|
>C191156643 |
CP037993 |
Betaproteobacteria |
Herbaspirillum huttiense NFYY 53159 [CP037993] |
4465861 |
4465786 |
- |
Ala |
TGC |
- |
¡û |
|
>C191156645 |
CP037993 |
Betaproteobacteria |
Herbaspirillum huttiense NFYY 53159 [CP037993] |
4460098 |
4460023 |
- |
Ala |
TGC |
- |
¡û |
|
>W09119227 |
ACDP01000054 |
Betaproteobacteria |
Oxalobacter paraformigenes HOxBLS [ACDP] |
2094 |
2169 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W09119274 |
ACDQ01000020 |
Betaproteobacteria |
Oxalobacter formigenes OXCC13 [ACDQ] |
3785 |
3710 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W09134972 |
ACVF01000013 |
Betaproteobacteria |
Sideroxydans lithotrophicus ES-1 [ACVF] |
2003 |
2078 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W141817323 |
JQKP01000002 |
Betaproteobacteria |
Ferriphaselus sp. R-1 [JQKP] |
400990 |
401065 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W141817342 |
JQKP01000012 |
Betaproteobacteria |
Ferriphaselus sp. R-1 [JQKP] |
82893 |
82818 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W141817350 |
JQKP01000018 |
Betaproteobacteria |
Ferriphaselus sp. R-1 [JQKP] |
3510 |
3435 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W141817352 |
JQKP01000019 |
Betaproteobacteria |
Ferriphaselus sp. R-1 [JQKP] |
2044 |
2119 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1910577885 |
JUGD01000052 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans Os38 [JUGD] |
3556 |
3481 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W1910578310 |
JWJC01000017 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans Os44 [JWJC] |
208486 |
208561 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1911572368 |
PDBX01000001 |
Betaproteobacteria |
Collimonas sp. PA-H2 [PDBX] |
3251226 |
3251301 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1911572393 |
PDBX01000001 |
Betaproteobacteria |
Collimonas sp. PA-H2 [PDBX] |
1799851 |
1799776 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W1911572395 |
PDBX01000001 |
Betaproteobacteria |
Collimonas sp. PA-H2 [PDBX] |
1519540 |
1519465 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W1911647625 |
QAJP01000012 |
Betaproteobacteria |
Herminiimonas sp. KBW02 [QAJP] |
2275 |
2350 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1911802721 |
QYUN01000002 |
Betaproteobacteria |
Noviherbaspirillum cavernae K2R10-39 [QYUN] |
393146 |
393221 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1911802752 |
QYUN01000002 |
Betaproteobacteria |
Noviherbaspirillum cavernae K2R10-39 [QYUN] |
3299806 |
3299731 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W1911802769 |
QYUN01000003 |
Betaproteobacteria |
Noviherbaspirillum cavernae K2R10-39 [QYUN] |
618279 |
618354 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1911802795 |
QYUO01000001 |
Betaproteobacteria |
Noviherbaspirillum saxi K1R23-30 [QYUO] |
3111366 |
3111291 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W1911802797 |
QYUO01000001 |
Betaproteobacteria |
Noviherbaspirillum saxi K1R23-30 [QYUO] |
3069588 |
3069513 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W1911802818 |
QYUO01000002 |
Betaproteobacteria |
Noviherbaspirillum saxi K1R23-30 [QYUO] |
524111 |
524186 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1911802820 |
QYUO01000002 |
Betaproteobacteria |
Noviherbaspirillum saxi K1R23-30 [QYUO] |
1573765 |
1573690 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W1911802883 |
QYUQ01000002 |
Betaproteobacteria |
Noviherbaspirillum sedimenti K1S02-23 [QYUQ] |
306504 |
306579 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1911802914 |
QYUQ01000002 |
Betaproteobacteria |
Noviherbaspirillum sedimenti K1S02-23 [QYUQ] |
2638907 |
2638832 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W1911802917 |
QYUQ01000002 |
Betaproteobacteria |
Noviherbaspirillum sedimenti K1S02-23 [QYUQ] |
1958019 |
1957944 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W1911802932 |
QYUQ01000004 |
Betaproteobacteria |
Noviherbaspirillum sedimenti K1S02-23 [QYUQ] |
4927 |
4852 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>SRA1001459 |
SRR001065.4030 |
Tilapia Farm, microbial fraction from gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000153) |
|
77 |
2 |
- |
Ala |
TGC |
[SRA] |
|
|
>SRA1001463 |
SRR001065.23439 |
Tilapia Farm, microbial fraction from gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000153) |
|
2 |
77 |
+ |
Ala |
TGC |
[SRA] |
|
|
>SRA1001487 |
SRR001066.36809 |
Tilapia Farm, microbial fraction from gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish were sick at time of sampling (SRP000154) |
|
74 |
1 |
- |
Ala |
TGC |
[SRA] |
|
|
>SRA1001519 |
SRR001068.1122 |
Tilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish were sick at time of sampling (SRP000156) |
|
18 |
93 |
+ |
Ala |
TGC |
[SRA] |
|
|
>SRA1001575 |
SRR001072.27561 |
Tilapia Farm, viral fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA; fish were sick at time of sampling (SRP000160) |
|
73 |
1 |
- |
Ala |
TGC |
[SRA] |
|
|
>W1810068137 |
PDZH01000189 |
Betaproteobacteria |
Chitinimonas sp. BJB300 [PDZH] |
1643 |
1718 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1810194075 |
PKOI01000040 |
Betaproteobacteria |
Herbaspirillum sp. BH-1 [PKOI] |
2039 |
2114 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1810297238 |
PTLZ01000008 |
Betaproteobacteria |
Herminiimonas fonticola S-94 [PTLZ] |
2257 |
2332 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1810887541 |
QUQN01000010 |
Betaproteobacteria |
Herbaspirillum sp. 3R-3a1 [QUQN] |
2190 |
2265 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>C151062584 |
CP009962 |
Betaproteobacteria |
Collimonas arenae Cal35 [CP009962] |
879556 |
879631 |
+ |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C151062611 |
CP009962 |
Betaproteobacteria |
Collimonas arenae Cal35 [CP009962] |
5110184 |
5110109 |
- |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C151062613 |
CP009962 |
Betaproteobacteria |
Collimonas arenae Cal35 [CP009962] |
4858223 |
4858148 |
- |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C151082349 |
CP011409 |
Betaproteobacteria |
Herbaspirillum hiltneri N3 [CP011409] |
440363 |
440438 |
+ |
Ala |
TGC |
- |
¡û |
|
>C151082376 |
CP011409 |
Betaproteobacteria |
Herbaspirillum hiltneri N3 [CP011409] |
4307886 |
4307811 |
- |
Ala |
TGC |
- |
¡û |
|
>C151087562 |
CP011930 |
Betaproteobacteria |
Herbaspirillum seropedicae Z67 [CP011930] |
521379 |
521454 |
+ |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C151087590 |
CP011930 |
Betaproteobacteria |
Herbaspirillum seropedicae Z67 [CP011930] |
4442285 |
4442210 |
- |
Ala |
TGC |
[Ensembl] |
¡û |
|
>W1510017321 |
BBTH01000019 |
Betaproteobacteria |
Ferriphaselus amnicola OYT1 [BBTH] |
2009 |
2084 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>C10107798 |
CP002039 |
Betaproteobacteria |
Herbaspirillum seropedicae SmR1 [CP002039] |
521380 |
521455 |
+ |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C10107819 |
CP002039 |
Betaproteobacteria |
Herbaspirillum seropedicae SmR1 [CP002039] |
5431690 |
5431615 |
- |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C10107824 |
CP002039 |
Betaproteobacteria |
Herbaspirillum seropedicae SmR1 [CP002039] |
4446399 |
4446324 |
- |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C10111852 |
CP001965 |
Betaproteobacteria |
Sideroxydans lithotrophicus ES-1 [CP001965] |
359135 |
359210 |
+ |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C10111881 |
CP001965 |
Betaproteobacteria |
Sideroxydans lithotrophicus ES-1 [CP001965] |
1926610 |
1926535 |
- |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C11105059 |
CP002745 |
Betaproteobacteria |
Collimonas fungivorans Ter331 [CP002745] |
830932 |
831007 |
+ |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C11105078 |
CP002745 |
Betaproteobacteria |
Collimonas fungivorans Ter331 [CP002745] |
4697533 |
4697458 |
- |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C11105080 |
CP002745 |
Betaproteobacteria |
Collimonas fungivorans Ter331 [CP002745] |
4445896 |
4445821 |
- |
Ala |
TGC |
[Ensembl] |
¡û |
|
>W1511480636 |
JWJG01000028 |
Betaproteobacteria |
Noviherbaspirillum autotrophicum TSA66 [JWJG] |
878281 |
878356 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1511480639 |
JWJG01000028 |
Betaproteobacteria |
Noviherbaspirillum autotrophicum TSA66 [JWJG] |
1232105 |
1232180 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1511480648 |
JWJG01000028 |
Betaproteobacteria |
Noviherbaspirillum autotrophicum TSA66 [JWJG] |
2740270 |
2740345 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1511577588 |
LAQU01000081 |
Betaproteobacteria |
Robbsia andropogonis ICMP2807 [LAQU] |
3614 |
3539 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W1511683802 |
LFLS01000071 |
Betaproteobacteria |
Herbaspirillum autotrophicum IAM 14942 [LFLS] |
1941 |
2016 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1511683849 |
LFLT01000090 |
Betaproteobacteria |
Herbaspirillum chlorophenolicum CPW301 [LFLT] |
3578 |
3503 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W1511683896 |
LFLU01000036 |
Betaproteobacteria |
Herbaspirillum rhizosphaerae UMS-37 [LFLU] |
3523 |
3448 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>C161053580 |
CP013232 |
Betaproteobacteria |
Collimonas fungivorans Ter6 [CP013232] |
1043436 |
1043511 |
+ |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C161053599 |
CP013232 |
Betaproteobacteria |
Collimonas fungivorans Ter6 [CP013232] |
5114219 |
5114144 |
- |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C161053601 |
CP013232 |
Betaproteobacteria |
Collimonas fungivorans Ter6 [CP013232] |
4862379 |
4862304 |
- |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C161053654 |
CP013233 |
Betaproteobacteria |
Collimonas arenae Ter10 [CP013233] |
4180691 |
4180616 |
- |
Ala |
TGC |
- |
¡û |
|
>C161053656 |
CP013233 |
Betaproteobacteria |
Collimonas arenae Ter10 [CP013233] |
3931419 |
3931344 |
- |
Ala |
TGC |
- |
¡û |
|
>C161053675 |
CP013234 |
Betaproteobacteria |
Collimonas pratensis Ter91 [CP013234] |
845236 |
845311 |
+ |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C161053698 |
CP013234 |
Betaproteobacteria |
Collimonas pratensis Ter91 [CP013234] |
5145613 |
5145538 |
- |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C161053700 |
CP013234 |
Betaproteobacteria |
Collimonas pratensis Ter91 [CP013234] |
4787756 |
4787681 |
- |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C161053723 |
CP013235 |
Betaproteobacteria |
Collimonas arenae Ter282 [CP013235] |
657553 |
657628 |
+ |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C161053750 |
CP013235 |
Betaproteobacteria |
Collimonas arenae Ter282 [CP013235] |
4166003 |
4165928 |
- |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C161053752 |
CP013235 |
Betaproteobacteria |
Collimonas arenae Ter282 [CP013235] |
3916679 |
3916604 |
- |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C161053773 |
CP013236 |
Betaproteobacteria |
Collimonas pratensis Ter291 [CP013236] |
784605 |
784680 |
+ |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C161053798 |
CP013236 |
Betaproteobacteria |
Collimonas pratensis Ter291 [CP013236] |
5068233 |
5068158 |
- |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C161053800 |
CP013236 |
Betaproteobacteria |
Collimonas pratensis Ter291 [CP013236] |
4806491 |
4806416 |
- |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C161060435 |
CP013737 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans M1 [CP013737] |
546168 |
546243 |
+ |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C161060458 |
CP013737 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans M1 [CP013737] |
5526093 |
5526018 |
- |
Ala |
TGC |
[Ensembl] |
¡û |
|
>C161060463 |
CP013737 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans M1 [CP013737] |
4524327 |
4524252 |
- |
Ala |
TGC |
[Ensembl] |
¡û |
|
>W121061959 |
AJHH01000137 |
Betaproteobacteria |
Herbaspirillum lusitanum P6-12 [AJHH] |
2688 |
2763 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W121068725 |
AJVC01000004 |
Betaproteobacteria |
Herbaspirillum sp. GW103 [AJVC] |
812169 |
812094 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W121068737 |
AJVC01000006 |
Betaproteobacteria |
Herbaspirillum sp. GW103 [AJVC] |
305743 |
305668 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W121085148 |
AKJA01000016 |
Betaproteobacteria |
Herbaspirillum sp. YR522 [AKJA] |
3859 |
3784 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W121086403 |
AKJW01000112 |
Betaproteobacteria |
Herbaspirillum sp. CF444 [AKJW] |
3608 |
3533 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W1610070455 |
BCTG01000073 |
Betaproteobacteria |
Herbaspirillum chlorophenolicum NBRC 102525 [BCTG] |
206 |
281 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1610071872 |
BCUJ01000067 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ] |
1335 |
1410 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1610729417 |
LMHZ01000007 |
Betaproteobacteria |
Noviherbaspirillum sp. Root189 [LMHZ] |
130610 |
130685 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1610915755 |
LSLI01000135 |
Betaproteobacteria |
Candidatus Gallionella acididurans [LSLI] |
1980 |
2055 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>ENV000078 |
AB266369 |
Environmental sample from ENV division of INSDC |
|
182 |
259 |
+ |
Ala |
TGC |
[ENA] |
|
|
>W1710067828 |
BCTG01000073 |
Betaproteobacteria |
Herbaspirillum chlorophenolicum NBRC 102525 [BCTG] |
206 |
281 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1710069074 |
BCUJ01000067 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ] |
1335 |
1410 |
+ |
Ala |
TGC |
[ENA] |
¡û |
|
>W1710530389 |
FNOR01000042 |
Betaproteobacteria |
Collimonas sp. OK242 [FNOR] |
3590 |
3515 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W1710556477 |
FOKF01000085 |
Betaproteobacteria |
Collimonas sp. OK607 [FOKF] |
381 |
306 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W1710557556 |
FOLC01000053 |
Betaproteobacteria |
Collimonas sp. OK412 [FOLC] |
3608 |
3533 |
- |
Ala |
TGC |
[ENA] |
¡û |
|
>W1710582056 |
FPKR01000026 |
Betaproteobacteria |
Chitinimonas taiwanensis DSM 18899 [FPKR] |
1644 |
1719 |
+ |
Ala |
TGC |
[ENA] |
¡û |
Select
|
Sequence ID |
Genome ID (or Accession No.) |
Phylum/Class (Sample source for ENV) |
Species |
Start |
End |
Direction |
AA |
Anticodon |
Genome/Seq. Info. |
Decision |