tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.454378 (99 seq.)
>W1710808937 LKDZ01000028 Betaproteobacteria Variovorax boronicumulans [LKDZ] 66814 66741 - Cys GCA [ENA] ¡û
>W1710861014 LMDI01000015 Betaproteobacteria Rhizobacter sp. Root1221 [LMDI] 81186 81259 + Cys GCA [ENA] ¡û
>W1710862478 LMEK01000012 Betaproteobacteria Variovorax sp. Root434 [LMEK] 418324 418397 + Cys GCA [ENA] ¡û
>W1710863090 LMEV01000017 Betaproteobacteria Variovorax sp. Root473 [LMEV] 1759326 1759253 - Cys GCA [ENA] ¡û
>W1710873409 LMMT01000015 Betaproteobacteria Pseudorhodoferax sp. Leaf265 [LMMT] 52983 52910 - Cys GCA [ENA] ¡û
>W1711123807 LUJJ01000011 Betaproteobacteria Variovorax boronicumulans [LUJJ] 86775 86848 + Cys GCA [ENA] ¡û
>W1711143377 LVHG01000083 Betaproteobacteria Variovorax paradoxus [LVHG] 33970 33897 - Cys GCA [ENA] ¡û
>W131174614 ARIP01000034 Betaproteobacteria Variovorax paradoxus 4MFCol3.1 [ARIP] 13493 13420 - Cys GCA [ENA] ¡û
>W1711394875 MERT01000028 Betaproteobacteria Burkholderiales bacterium GWF1_66_17 [MERT] 115190 115117 - Cys GCA [ENA] ¡û
>W1711506625 MKWO01000021 Betaproteobacteria Variovorax sp. 67-131 [MKWO] 265671 265744 + Cys GCA [ENA] ¡û
>W1711751718 MUNZ01000101 Betaproteobacteria Hydrogenophaga sp. A37 [MUNZ] 95320 95393 + Cys GCA [ENA] ¡û
>C171091635 CP019236 Betaproteobacteria Rhodoferax koreense DCY-110 [CP019236] 2432266 2432339 + Cys GCA - ¡û
>WENV180691435 OCZS010123469 [OCZS] soil metagenome; soil 598 525 - Cys GCA [ENA] ¡û
>WENV180835971 ODKE01023884 [ODKE] human metagenome; G_DNA_Supragingival plaque 1134 1061 - Cys GCA [ENA] ¡û
>WENV181049513 ODYD01000442 [ODYD] human metagenome; G_DNA_Supragingival plaque 110 183 + Cys GCA [ENA] ¡û
>WENV181070536 OEAE01003013 [OEAE] human metagenome; G_DNA_Supragingival plaque 5357 5284 - Cys GCA [ENA] ¡û
>WENV181108226 OEEI01153789 [OEEI] human metagenome; G_DNA_Supragingival plaque 64 137 + Cys GCA [ENA] ¡û
>WENV181364792 OFPD01000150 [OFPD] sediment metagenome; Lake sediment 2550 2623 + Cys GCA [ENA] ¡û
>WENV181367193 OFPW01001345 [OFPW] freshwater metagenome; Freshwater Lake 417 344 - Cys GCA [ENA] ¡û
>WENV181368047 OFQG01000347 [OFQG] freshwater metagenome; Freshwater Lake 150 77 - Cys GCA [ENA] ¡û
>WENV181370356 OFQS01005198 [OFQS] freshwater metagenome; Freshwater Lake 1060 987 - Cys GCA [ENA] ¡û
>WENV181384059 OFRH01011944 [OFRH] wastewater metagenome; Exp Tend NO 100WW 117 190 + Cys GCA [ENA] ¡û
>W141214278 AZSO01000045 Betaproteobacteria Hydrogenophaga sp. T4 [AZSO] 2578 2505 - Cys GCA [ENA] ¡û
>WENV183735242 PJUA01005410 [PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment 118 191 + Cys GCA [ENA] ¡û
>WENV183741429 PJUG01000010 [PJUG] feces metagenome; Chicken feces (2) enriched on wood chips: beechwood xylan treatment 138340 138267 - Cys GCA [ENA] ¡û
>WENV170018859 BBPD01001601 [BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California 8676 8749 + Cys GCA [ENA] ¡û
>WENV170553130 CXWK01008755 [CXWK] wastewater metagenome; activated sludge 471 398 - Cys GCA [ENA] ¡û
>WENV170639736 JFJP01006463 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 8474 8547 + Cys GCA [ENA] ¡û
>WENV170651897 JRYG01011762 [JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated 133 206 + Cys GCA [ENA] ¡û
>WENV170705542 LNAO01002103 [LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 232 159 - Cys GCA [ENA] ¡û
>WENV170705544 LNAO01002141 [LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 2336 2409 + Cys GCA [ENA] ¡û
>WENV170707957 LNAP01041664 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 1114 1187 + Cys GCA [ENA] ¡û
>WENV170712307 LNFM01012045 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 10675 10748 + Cys GCA [ENA] ¡û
>WENV170713058 LNFM01023121 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 10230 10157 - Cys GCA [ENA] ¡û
>WENV171003035 NKIC01007824 [NKIC] algae metagenome; Clonal culture of Asterionella formosa BG1 isolated from Esthwaite Water 407 334 - Cys GCA [ENA] ¡û
>WENV171003619 NNBU01000839 [NNBU] plant metagenome; symbiotic tissue sample KVJ2 15734 15661 - Cys GCA [ENA] ¡û
>C181078467 CP023284 Betaproteobacteria Variovorax boronicumulans J1 [CP023284] 3400603 3400676 + Cys GCA - ¡û
>C181159410 CP027773 Betaproteobacteria Variovorax sp. PMC12 [CP027773, CP027774] 1574587 1574514 - Cys GCA - ¡û
>C191163879 CP039252 Betaproteobacteria Hydrogenophaga sp. PAMC20947 [CP039252] 662991 663064 + Cys GCA - ¡û
>W1910700025 MESC01000449 Betaproteobacteria Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_67_38 [MESC] 6251 6178 - Cys GCA [ENA] ¡û
>W1910700137 MESF01000186 Betaproteobacteria Burkholderiales bacterium RIFCSPLOWO2_02_FULL_66_35 [MESF] 39507 39580 + Cys GCA [ENA] ¡û
>W1910700151 MESG01000046 Betaproteobacteria Burkholderiales bacterium RIFCSPLOWO2_02_FULL_67_64 [MESG] 14274 14347 + Cys GCA [ENA] ¡û
>W1910700187 MESH01000157 Betaproteobacteria Burkholderiales bacterium RIFCSPLOWO2_12_67_14 [MESH] 42080 42007 - Cys GCA [ENA] ¡û
>W1910700406 MESM01000275 Betaproteobacteria Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210 [MESM] 2519 2592 + Cys GCA [ENA] ¡û
>W1910792821 MRCN01000004 Betaproteobacteria Variovorax boronicumulans ACN3 [MRCN] 296557 296484 - Cys GCA [ENA] ¡û
>W1911496691 OCMW01000001 Betaproteobacteria Variovorax sp. YR752 [OCMW] 3427551 3427624 + Cys GCA [ENA] ¡û
>W1911502800 OEQA01000007 Betaproteobacteria Ottowia sp. Marseille-P4747 [OEQA] 124131 124058 - Cys GCA [ENA] ¡û
>W1911647358 QAJK01000099 Betaproteobacteria Variovorax sp. KBW07 [QAJK] 12225 12298 + Cys GCA [ENA] ¡û
>W1911775297 QXMN01000001 Betaproteobacteria Acidovorax cavernicola 1011MAR4D40.2 [QXMN] 136658 136731 + Cys GCA [ENA] ¡û
>W1810046197 NNBQ01000004 Betaproteobacteria Variovorax sp. B4 [NNBQ] 732460 732387 - Cys GCA [ENA] ¡û
>W1810046281 NNBR01000003 Betaproteobacteria Variovorax sp. B2 [NNBR] 732472 732399 - Cys GCA [ENA] ¡û
>W1810392055 PXZZ01000034 Betaproteobacteria Variovorax sp. WS11 [PXZZ] 41455 41528 + Cys GCA [ENA] ¡û
>W1810577614 QEOJ01000004 Betaproteobacteria Rhodoferax sp. YR267 [QEOJ] 227588 227661 + Cys GCA [ENA] ¡û
>W1810577616 QEOJ01000004 Betaproteobacteria Rhodoferax sp. YR267 [QEOJ] 227853 227926 + Cys GCA [ENA] ¡û
>W1810676095 QKLT01000002 Betaproteobacteria Variovorax sp. GV042 [QKLT] 584757 584830 + Cys GCA [ENA] ¡û
>W1810682477 QKUE01000004 Betaproteobacteria Variovorax sp. GV004 [QKUE] 584757 584830 + Cys GCA [ENA] ¡û
>W1810759444 QPJK01000008 Betaproteobacteria Pseudorhodoferax soli DSM 21634 [QPJK] 271136 271063 - Cys GCA [ENA] ¡û
>W2010108387 BKDI01000001 Betaproteobacteria Variovorax boronicumulans c24 [BKDI] 1874865 1874792 - Cys GCA [ENA] ¡û
>W2010833451 MESC01000449 Betaproteobacteria Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_67_38 [MESC] 6251 6178 - Cys GCA [ENA] ¡û
>W2010833563 MESF01000186 Betaproteobacteria Burkholderiales bacterium RIFCSPLOWO2_02_FULL_66_35 [MESF] 39507 39580 + Cys GCA [ENA] ¡û
>W2010833577 MESG01000046 Betaproteobacteria Burkholderiales bacterium RIFCSPLOWO2_02_FULL_67_64 [MESG] 14274 14347 + Cys GCA [ENA] ¡û
>W2010833613 MESH01000157 Betaproteobacteria Burkholderiales bacterium RIFCSPLOWO2_12_67_14 [MESH] 42080 42007 - Cys GCA [ENA] ¡û
>W2010833832 MESM01000275 Betaproteobacteria Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210 [MESM] 2519 2592 + Cys GCA [ENA] ¡û
>W2011161197 OEQA01000007 Betaproteobacteria Ottowia sp. Marseille-P4747 [OEQA] 124131 124058 - Cys GCA [ENA] ¡û
>W2011235342 QAJK01000099 Betaproteobacteria Variovorax sp. KBW07 [QAJK] 12225 12298 + Cys GCA [ENA] ¡û
>W2011328854 QXMN01000001 Betaproteobacteria Acidovorax cavernicola 1011MAR4D40.2 [QXMN] 136658 136731 + Cys GCA [ENA] ¡û
>W2011482828 RQXU01000004 Betaproteobacteria Variovorax sp. T529 [RQXU] 13414 13341 - Cys GCA [ENA] ¡û
>W2011495804 RXFR01000010 Betaproteobacteria Variovorax sp. 553 [RXFR] 153812 153885 + Cys GCA [ENA] ¡û
>W2011495858 RXFS01000010 Betaproteobacteria Variovorax sp. 679 [RXFS] 151559 151486 - Cys GCA [ENA] ¡û
>W2012046927 VIVL01000006 Betaproteobacteria Variovorax sp. T529 [VIVL] 398625 398698 + Cys GCA [ENA] ¡û
>W2012207477 VYGV01000006 Betaproteobacteria Hydrogenophaga sp. D2P1 [VYGV] 930695 930622 - Cys GCA [ENA] ¡û
>W2110519462 JAFNME010000001 Betaproteobacteria Comamonas denitrificans MM2021_4 [JAFNME] 122342 122415 + Cys GCA [ENA] ¡û
>W2110587523 JAHBAG010000001 Betaproteobacteria Hydrogenophaga taeniospiralis LT3 [JAHBAG] 3966503 3966430 - Cys GCA [ENA] ¡û
>C211067325 CP046508 Betaproteobacteria Variovorax sp. RKNM96 [CP046508] 3125330 3125403 + Cys GCA - ¡û
>C231096947 CP063400 Betaproteobacteria Hydrogenophaga sp. SL48 [CP063400] 1276745 1276818 + Cys GCA - ¡û
>C231139672 CP075183 Betaproteobacteria Hydrogenophaga taeniospiralis LT2 [CP075183] 2179810 2179883 + Cys GCA - ¡û
>C231461178 CP102931 Betaproteobacteria Variovorax paradoxus JBCE486 [CP102931] 2626226 2626299 + Cys GCA - ¡û
>C231541556 CP111109 Betaproteobacteria Comamonadaceae bacterium AAW [CP111109] 4211051 4210978 - Cys GCA - ¡û
>C241111950 CP046622 Betaproteobacteria Variovorax paradoxus CSUSB [CP046622] 3318616 3318543 - Cys GCA - ¡û
>C241150419 CP051461 Betaproteobacteria Polaromonas vacuolata KCTC 22033 [CP051461] 2671945 2671872 - Cys GCA - ¡û
>W2310006939 AOGK01000018 Betaproteobacteria Hydrogenophaga taeniospiralis CCUG 15921 [AOGK] 53709 53782 + Cys GCA [ENA] ¡û
>C11123609 CP002417 Betaproteobacteria Variovorax paradoxus EPS [CP002417] 3684652 3684579 - Cys GCA [Ensembl] ¡û
>W1511508940 JXQQ01000071 Betaproteobacteria Variovorax paradoxus MEDvA23 [JXQQ] 67018 66945 - Cys GCA [ENA] ¡û
>W1511554982 JZWI01000001 Betaproteobacteria Variovorax paradoxus TBEA6 [JZWI] 13499 13426 - Cys GCA [ENA] ¡û
>W1610047737 BBDP01000080 Betaproteobacteria Variovorax sp. RA8 [BBDP] 1594 1521 - Cys GCA [ENA] ¡û
>W1610074455 BCWR01000022 Betaproteobacteria Hydrogenophaga taeniospiralis NBRC 102512 [BCWR] 49104 49031 - Cys GCA [ENA] ¡û
>W1610722499 LMCQ01000023 Betaproteobacteria Variovorax sp. Root318D1 [LMCQ] 234880 234953 + Cys GCA [ENA] ¡û
>W1610723360 LMDI01000015 Betaproteobacteria Rhizobacter sp. Root1221 [LMDI] 81186 81259 + Cys GCA [ENA] ¡û
>W1610724117 LMDW01000016 Betaproteobacteria Variovorax sp. Root411 [LMDW] 736915 736842 - Cys GCA [ENA] ¡û
>W1610724824 LMEK01000012 Betaproteobacteria Variovorax sp. Root434 [LMEK] 418324 418397 + Cys GCA [ENA] ¡û
>W1610725436 LMEV01000017 Betaproteobacteria Variovorax sp. Root473 [LMEV] 1759326 1759253 - Cys GCA [ENA] ¡û
>W1610736081 LMNA01000007 Betaproteobacteria Pseudorhodoferax sp. Leaf274 [LMNA] 139270 139343 + Cys GCA [ENA] ¡û
>W1610744260 LMTS01000193 Betaproteobacteria Variovorax sp. WDL1 [LMTS] 2237 2310 + Cys GCA [ENA] ¡û
>W1610954385 LVHG01000083 Betaproteobacteria Variovorax paradoxus [LVHG] 33970 33897 - Cys GCA [ENA] ¡û
>W1610977568 LVWD01000013 Betaproteobacteria Hydrogenophaga crassostreae LPB0072 [LVWD] 549641 549568 - Cys GCA [ENA] ¡û
>W1710044247 BBDP01000080 Betaproteobacteria Variovorax sp. RA8 [BBDP] 1594 1521 - Cys GCA [ENA] ¡û
>W1710071573 BCWR01000022 Betaproteobacteria Hydrogenophaga taeniospiralis NBRC 102512 [BCWR] 49104 49031 - Cys GCA [ENA] ¡û
>W1710512958 FMZU01000016 Betaproteobacteria Variovorax sp. CF079 [FMZU] 108507 108580 + Cys GCA [ENA] ¡û
>W1710530031 FNOL01000009 Betaproteobacteria Variovorax sp. YR634 [FNOL] 71053 71126 + Cys GCA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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