tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.474654 (71 seq.)
>W1710873504 LMMV01000012 Betaproteobacteria Pseudorhodoferax sp. Leaf267 [LMMV] 887643 887716 + Cys GCA [ENA] ¡û
>W1711259841 LYVO01000102 Betaproteobacteria Variovorax sp. KK3 [LYVO] 8333 8260 - Cys GCA [ENA] ¡û
>W1711386480 MEFM01000011 Betaproteobacteria Variovorax sp. SCN 67-85 [MEFM] 133505 133578 + Cys GCA [ENA] ¡û
>W1711387459 MEGR01000003 Betaproteobacteria Variovorax sp. SCN 67-20 [MEGR] 123932 124005 + Cys GCA [ENA] ¡û
>C171063216 CP017476 Betaproteobacteria Hydrogenophaga crassostreae LPB0072 [CP017476] 2925463 2925390 - Cys GCA - ¡û
>WENV180285895 OBID01800728 [OBID] metagenome; sludge 135 62 - Cys GCA [ENA] ¡û
>WENV180731599 ODGW01003110 [ODGW] human metagenome; G_DNA_Supragingival plaque 110 183 + Cys GCA [ENA] ¡û
>WENV180938673 ODTX01004900 [ODTX] human metagenome; G_DNA_Supragingival plaque 110 183 + Cys GCA [ENA] ¡û
>WENV180981758 ODVE01055591 [ODVE] human metagenome; G_DNA_Supragingival plaque 533 460 - Cys GCA [ENA] ¡û
>WENV183735645 PJUB01000310 [PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment 23584 23511 - Cys GCA [ENA] ¡û
>WENV183736355 PJUC01001028 [PJUC] soil metagenome; Soil enriched on filter paper 5321 5394 + Cys GCA [ENA] ¡û
>WENV183741913 PJUH01000006 [PJUH] feces metagenome; Chicken feces (2) enriched on wood chips: alkali lignin treatment 428132 428205 + Cys GCA [ENA] ¡û
>WENV183742938 PJUI01015722 [PJUI] feces metagenome; Chicken feces (2) enriched on wood chips 171 244 + Cys GCA [ENA] ¡û
>WENV183744349 PJUK01009770 [PJUK] feces metagenome; Chicken feces enriched on filter paper: alkali lignin treatment 795 722 - Cys GCA [ENA] ¡û
>WENV170020309 BBPE01005589 [BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California 9250 9323 + Cys GCA [ENA] ¡û
>WENV170649499 JRYC01012419 [JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater 255 182 - Cys GCA [ENA] ¡û
>WENV171003328 NNBT01004890 [NNBT] plant metagenome; symbiotic tissue sample KVJ10 1011 938 - Cys GCA [ENA] ¡û
>W141558095 JHVQ01000012 Betaproteobacteria Variovorax sp. URHB0020 [JHVQ] 192774 192847 + Cys GCA [ENA] ¡û
>W09119931 ACEE01000019 Betaproteobacteria Variovorax paradoxus S110 [ACEE] 19434 19361 - Cys GCA [ENA] ¡û
>C09111098 CP001635 Betaproteobacteria Variovorax paradoxus [CP001635] 2653845 2653918 + Cys GCA [Ensembl] ¡û
>C141002571 CP003911 Betaproteobacteria Variovorax paradoxus B4 [CP003911, CP003912] 3206732 3206659 - Cys GCA [Ensembl] ¡û
>W1810486656 QAYA01000002 Betaproteobacteria Variovorax sp. GV040 [QAYA] 584757 584830 + Cys GCA [ENA] ¡û
>W1810672531 QJTM01000003 Betaproteobacteria Variovorax sp. GV035 [QJTM] 584757 584830 + Cys GCA [ENA] ¡û
>SRA1015363 SRR023846.30547 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 168 95 - Cys GCA [SRA]
>W2010108353 BKDH01000001 Betaproteobacteria Variovorax boronicumulans HAB-30 [BKDH] 2576930 2576857 - Cys GCA [ENA] ¡û
>W2010308744 CABWKX010000018 Betaproteobacteria Burkholderiales bacterium 8X [CABWKX] 316844 316771 - Cys GCA [ENA] ¡û
>W2010469840 JAAGOW010000003 Betaproteobacteria Variovorax sp. WS11 [JAAGOW] 177809 177882 + Cys GCA [ENA] ¡û
>W2010609297 JABMJH010000002 Betaproteobacteria Variovorax sp. SG533 [JABMJH] 240807 240734 - Cys GCA [ENA] ¡û
>W2010802570 LZZW01000037 Betaproteobacteria Variovorax sp. UMC13 [LZZW] 62013 61940 - Cys GCA [ENA] ¡û
>W2010901283 MRCN01000004 Betaproteobacteria Variovorax boronicumulans ACN3 [MRCN] 296557 296484 - Cys GCA [ENA] ¡û
>W2011157595 OCMW01000001 Betaproteobacteria Variovorax sp. YR752 [OCMW] 3427551 3427624 + Cys GCA [ENA] ¡û
>W2011494469 RWKH01000026 Betaproteobacteria Variovorax sp. DXTD-1 [RWKH] 75727 75800 + Cys GCA [ENA] ¡û
>W2011494482 RWKI01000001 Betaproteobacteria Variovorax sp. MHTC-1 [RWKI] 583790 583717 - Cys GCA [ENA] ¡û
>W2011495724 RXFQ01000003 Betaproteobacteria Variovorax sp. 502 [RXFQ] 407547 407620 + Cys GCA [ENA] ¡û
>W2011522466 SACT01000001 Betaproteobacteria Rubrivivax sp. ICH-3 [SACT] 988731 988804 + Cys GCA [ENA] ¡û
>W2011539107 SCNM01000018 Betaproteobacteria Variovorax sp. 3P27G3 [SCNM] 22053 21980 - Cys GCA [ENA] ¡û
>W2011577706 SGWS01000003 Betaproteobacteria Variovorax sp. BK460 [SGWS] 140261 140188 - Cys GCA [ENA] ¡û
>W2011624478 SLYJ01000004 Betaproteobacteria Variovorax sp. GV051 [SLYJ] 584757 584830 + Cys GCA [ENA] ¡û
>W2011971317 VCCD02000001 Betaproteobacteria Variovorax sp. KBS0712 [VCCD] 1793109 1793036 - Cys GCA [ENA] ¡û
>W2011997657 VEDO01000002 Betaproteobacteria Variovorax boronicumulans DE0202 [VEDO] 350511 350438 - Cys GCA [ENA] ¡û
>W2110049150 BMYK01000014 Betaproteobacteria Pseudorhodoferax aquiterrae KCTC 23314 [BMYK] 125085 125158 + Cys GCA [ENA] ¡û
>W2110079478 CAIGKF010000031 Betaproteobacteria Variovorax paradoxus [CAIGKF] 13449 13376 - Cys GCA [ENA] ¡û
>W2110120514 CAJQUA010000001 Betaproteobacteria Brachymonas denitrificans [CAJQUA] 976342 976269 - Cys GCA [ENA] ¡û
>W2110134455 JAAAFX010000009 Betaproteobacteria Variovorax boronicumulans Xaverov 112 [JAAAFX] 1348901 1348828 - Cys GCA [ENA] ¡û
>W2110260503 JACSQK010000006 Betaproteobacteria Comamonas sp. Sa2CVA6 [JACSQK] 114524 114597 + Cys GCA [ENA] ¡û
>W2110266982 JACUZW010000002 Betaproteobacteria Comamonas sp. CMM02 [JACUZW] 826064 826137 + Cys GCA [ENA] ¡û
>W2110268665 JACVBS010000004 Betaproteobacteria Variovorax sp. VRV01 [JACVBS] 13517 13444 - Cys GCA [ENA] ¡û
>W2110408638 JAEFCB010000011 Betaproteobacteria Variovorax sp. IB41 [JAEFCB] 118700 118773 + Cys GCA [ENA] ¡û
>W2110541748 JAGGNV010000066 Betaproteobacteria Variovorax paradoxus ISL-79 [JAGGNV] 55131 55204 + Cys GCA [ENA] ¡û
>C201306955 LR594659 Betaproteobacteria Variovorax sp. PBL-H6 [LR594659] 3204772 3204699 - Cys GCA - ¡û
>C201307133 LR594675 Betaproteobacteria Variovorax sp. PBS-H4 [LR594675] 3367547 3367474 - Cys GCA - ¡û
>C211132290 CP060295 Betaproteobacteria Variovorax sp. PAMC26660 [CP060295] 7069649 7069576 - Cys GCA - ¡û
>C211274653 CP070343 Betaproteobacteria Variovorax sp. PDNC026 [CP070343] 3683993 3684066 + Cys GCA - ¡û
>W2110748882 MOWM01000026 Betaproteobacteria Variovorax sp. E3 [MOWM] 61229 61302 + Cys GCA [ENA] ¡û
>C241251442 CP123990 Betaproteobacteria Variovorax paradoxus MGMM5 [CP123990] 2598407 2598334 - Cys GCA - ¡û
>C241342681 CP138515 Betaproteobacteria Variovorax paradoxus 2u118 [CP138515] 3257545 3257472 - Cys GCA - ¡û
>C241380134 LR594662 Betaproteobacteria Variovorax sp. RA8 [LR594662] 3489596 3489523 - Cys GCA - ¡û
>C241380148 LR594666 Betaproteobacteria Variovorax sp. SRS16 [LR594666] 2467396 2467469 + Cys GCA - ¡û
>C241380226 LR594689 Betaproteobacteria Variovorax sp. WDL1 [LR594689] 54402 54329 - Cys GCA - ¡û
>W1610072160 BCUS01000047 Betaproteobacteria Variovorax boronicumulans NBRC 103145 [BCUS] 13462 13389 - Cys GCA [ENA] ¡û
>W1610072200 BCUT01000001 Betaproteobacteria Variovorax paradoxus NBRC 15149 [BCUT] 63002 62929 - Cys GCA [ENA] ¡û
>W1610735755 LMMT01000015 Betaproteobacteria Pseudorhodoferax sp. Leaf265 [LMMT] 52983 52910 - Cys GCA [ENA] ¡û
>W1610735850 LMMV01000012 Betaproteobacteria Pseudorhodoferax sp. Leaf267 [LMMV] 887643 887716 + Cys GCA [ENA] ¡û
>W1710069362 BCUS01000047 Betaproteobacteria Variovorax boronicumulans NBRC 103145 [BCUS] 13462 13389 - Cys GCA [ENA] ¡û
>W1710069402 BCUT01000001 Betaproteobacteria Variovorax paradoxus NBRC 15149 [BCUT] 63002 62929 - Cys GCA [ENA] ¡û
>W1710506200 FMUJ01000003 Betaproteobacteria Variovorax sp. EL159 [FMUJ] 972405 972332 - Cys GCA [ENA] ¡û
>W1710517950 FNDR01000005 Betaproteobacteria Variovorax sp. OV700 [FNDR] 517623 517696 + Cys GCA [ENA] ¡û
>W1710547369 FOCW01000001 Betaproteobacteria Brachymonas denitrificans DSM 15123 [FOCW] 1225196 1225269 + Cys GCA [ENA] ¡û
>W1710554278 FOII01000001 Betaproteobacteria Variovorax sp. OV084 [FOII] 378225 378298 + Cys GCA [ENA] ¡û
>W1710558160 FOLP01000006 Betaproteobacteria Variovorax sp. OK212 [FOLP] 297948 298021 + Cys GCA [ENA] ¡û
>W1710572130 FOWL01000008 Betaproteobacteria Variovorax sp. OK605 [FOWL] 299209 299282 + Cys GCA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK