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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.510812 (186 seq.)
>W1710802928
LJYE01000084
Alphaproteobacteria
Bradyrhizobium pachyrhizi [LJYE]
15090
15165
+
Lys
TTT
[ENA]
¡û
>W1710855078
LLXZ01000227
Alphaproteobacteria
Bradyrhizobium jicamae [LLXZ]
69693
69618
-
Lys
TTT
[ENA]
¡û
>W1710855118
LLYA01000178
Alphaproteobacteria
Bradyrhizobium retamae [LLYA]
31187
31112
-
Lys
TTT
[ENA]
¡û
>W1710855190
LLYB01000132
Alphaproteobacteria
Bradyrhizobium lablabi [LLYB]
24850
24775
-
Lys
TTT
[ENA]
¡û
>W1711073437
LSIN01000282
Alphaproteobacteria
Bradyrhizobium sp. CCH10-C7 [LSIN]
1155
1080
-
Lys
TTT
[ENA]
¡û
>W1711193150
LWUI01000026
Alphaproteobacteria
Bradyrhizobium elkanii [LWUI]
186233
186308
+
Lys
TTT
[ENA]
¡û
>W1711206762
LXEM01000079
Alphaproteobacteria
Bradyrhizobium elkanii [LXEM]
176968
176893
-
Lys
TTT
[ENA]
¡û
>W1711317181
MAXB01000064
Alphaproteobacteria
Bradyrhizobium paxllaeri [MAXB]
56331
56256
-
Lys
TTT
[ENA]
¡û
>W1711317231
MAXC01000033
Alphaproteobacteria
Bradyrhizobium sp. LMTR 3 [MAXC]
564570
564495
-
Lys
TTT
[ENA]
¡û
>W1711487050
MKFI01000002
Alphaproteobacteria
Bradyrhizobium mercantei SEMIA 6399 [MKFI]
317018
317093
+
Lys
TTT
[ENA]
¡û
>W1711501119
MKRG01000005
Alphaproteobacteria
Afipia sp. 62-7 [MKRG]
6760
6685
-
Lys
TTT
[ENA]
¡û
>W1711612977
MOXO01000024
Alphaproteobacteria
Bradyrhizobium elkanii [MOXO]
3319
3394
+
Lys
TTT
[ENA]
¡û
>W1711636739
MPVQ01000052
Alphaproteobacteria
Bradyrhizobium brasilense UFLA 03-321 [MPVQ]
193942
194017
+
Lys
TTT
[ENA]
¡û
>W131164114
ARAG01000009
Alphaproteobacteria
Bradyrhizobium elkanii USDA 76 [ARAG]
909365
909290
-
Lys
TTT
[ENA]
¡û
>W131227215
AUEZ01000004
Alphaproteobacteria
Bradyrhizobium sp. Ai1a-2 [AUEZ]
142965
142890
-
Lys
TTT
[ENA]
¡û
>W131228556
AUGA01000022
Alphaproteobacteria
Bradyrhizobium sp. th.b2 [AUGA]
153827
153902
+
Lys
TTT
[ENA]
¡û
>WENV180044311
MAVI01000648
[MAVI] viral metagenome; RNA from tracheal sample collected at farm Ketul, Bansal
121
196
+
Lys
TTT
[ENA]
¡û
>WENV180044316
MAVJ01000602
[MAVJ] viral metagenome; RNA from tracheal sample collected at farm Nasib, Godhra
331
256
-
Lys
TTT
[ENA]
¡û
>W141007447
AGWX01000003
Alphaproteobacteria
Afipia broomeae ATCC 49717 [AGWX]
55775
55700
-
Lys
TTT
[ENA]
¡û
>W141007475
AGWY01000003
Alphaproteobacteria
Afipia clevelandensis ATCC 49720 [AGWY]
238456
238531
+
Lys
TTT
[ENA]
¡û
>WENV180304020
OBJH01000384
[OBJH] soil metagenome; soil
621
546
-
Lys
TTT
[ENA]
¡û
>W141043043
AMFB01000008
Alphaproteobacteria
Bradyrhizobium sp. DFCI-1 [AMFB]
210074
209999
-
Lys
TTT
[ENA]
¡û
>W141063427
APHQ01000030
Alphaproteobacteria
Afipia sp. OHSU_II-uncloned [APHQ]
55157
55082
-
Lys
TTT
[ENA]
¡û
>W141063687
APJD01000026
Alphaproteobacteria
Bradyrhizobium sp. OHSU_III [APJD]
38616
38541
-
Lys
TTT
[ENA]
¡û
>W141063725
APJE01000025
Alphaproteobacteria
Afipia sp. OHSU_I-C6 [APJE]
14395
14470
+
Lys
TTT
[ENA]
¡û
>W141063739
APJF01000001
Alphaproteobacteria
Afipia sp. OHSU_I-C4 [APJF]
422436
422361
-
Lys
TTT
[ENA]
¡û
>W141063794
APJG01000010
Alphaproteobacteria
Afipia sp. OHSU_I-uncloned [APJG]
14395
14470
+
Lys
TTT
[ENA]
¡û
>W141063836
APJH01000006
Alphaproteobacteria
Afipia sp. OHSU_II-C2 [APJH]
14395
14470
+
Lys
TTT
[ENA]
¡û
>W141063875
APJI01000004
Alphaproteobacteria
Afipia sp. OHSU_II-C1 [APJI]
178674
178749
+
Lys
TTT
[ENA]
¡û
>W141093596
AVBK01000015
Alphaproteobacteria
Afipia sp. NBIMC_P1-C1 [AVBK]
173548
173473
-
Lys
TTT
[ENA]
¡û
>W141093648
AVBL01000013
Alphaproteobacteria
Afipia sp. NBIMC_P1-C2 [AVBL]
331529
331454
-
Lys
TTT
[ENA]
¡û
>W141093679
AVBM01000003
Alphaproteobacteria
Afipia sp. NBIMC_P1-C3 [AVBM]
331529
331454
-
Lys
TTT
[ENA]
¡û
>WENV181166426
OEIU01000279
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
33663
33738
+
Lys
TTT
[ENA]
¡û
>WENV181375058
OFQY01043642
[OFQY] wastewater metagenome; Exp Tend VB 10WW
649
574
-
Lys
TTT
[ENA]
¡û
>WENV181379219
OFRD01000018
[OFRD] wastewater metagenome; Exp Tend CN 100WW
32380
32455
+
Lys
TTT
[ENA]
¡û
>WENV181384235
OFRH01040823
[OFRH] wastewater metagenome; Exp Tend NO 100WW
107
32
-
Lys
TTT
[ENA]
¡û
>WENV181385948
OFRL01000194
[OFRL] wastewater metagenome; Lake Maggiore Cannobio
19988
19913
-
Lys
TTT
[ENA]
¡û
>WENV181399841
OFSF01000030
[OFSF] wastewater metagenome; Exp Tend VB 100WW
3514
3439
-
Lys
TTT
[ENA]
¡û
>W141150307
AXAH01000002
Alphaproteobacteria
Bradyrhizobium elkanii USDA 3254 [AXAH]
169242
169167
-
Lys
TTT
[ENA]
¡û
>W141150727
AXAP01000030
Alphaproteobacteria
Bradyrhizobium elkanii WSM2783 [AXAP]
9161
9236
+
Lys
TTT
[ENA]
¡û
>W141151084
AXAU01000001
Alphaproteobacteria
Bradyrhizobium murdochi WSM1741 [AXAU]
619525
619450
-
Lys
TTT
[ENA]
¡û
>W141151172
AXAW01000002
Alphaproteobacteria
Bradyrhizobium elkanii USDA 3259 [AXAW]
245000
245075
+
Lys
TTT
[ENA]
¡û
>W141194136
AYSU01000009
Alphaproteobacteria
Rhodopseudomonas palustris JSC-3b [AYSU]
284871
284946
+
Lys
TTT
[ENA]
¡û
>W141223310
BADD01000344
Alphaproteobacteria
Rhodopseudomonas sp. B29 [BADD]
5546
5471
-
Lys
TTT
[ENA]
¡û
>W141278110
JAFC01000017
Alphaproteobacteria
Bradyrhizobium elkanii USDA 94 [JAFC]
108026
108101
+
Lys
TTT
[ENA]
¡û
>WENV183724352
PJQE01008702
[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
1309
1384
+
Lys
TTT
[ENA]
¡û
>WENV183745204
PJUL01005787
[PJUL] feces metagenome; Chicken feces enriched on filter paper
213
138
-
Lys
TTT
[ENA]
¡û
>WENV170132421
CENT01069227
[CENT] marine metagenome genome assembly TARA_007_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
870
945
+
Lys
TTT
[ENA]
¡û
>WENV170324732
CESS01101370
[CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
164
239
+
Lys
TTT
[ENA]
¡û
>WENV170566638
FKKE01078858
[FKKE] freshwater metagenome; freshwater
588
513
-
Lys
TTT
[ENA]
¡û
>WENV170577029
FRDC01002814
[FRDC] freshwater metagenome; water
94555
94480
-
Lys
TTT
[ENA]
¡û
>WENV170705633
LNAP01000036
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
71043
71118
+
Lys
TTT
[ENA]
¡û
>WENV170961912
MLJW01006167
[MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for
731
806
+
Lys
TTT
[ENA]
¡û
>C181113200
CP025113
Alphaproteobacteria
Bradyrhizobium sp. SK17 [CP025113]
5250469
5250394
-
Lys
TTT
-
¡û
>W1910183126
BJNL01000033
Alphaproteobacteria
Bradyrhizobium elkanii NBRC 14791 [BJNL]
3199
3274
+
Lys
TTT
[ENA]
¡û
>W1910568890
JHAA01000002
Alphaproteobacteria
Rhodopseudomonas palustris PSBS [JHAA]
18088
18013
-
Lys
TTT
[ENA]
¡û
>W1910693456
MDEP01000041
Alphaproteobacteria
Bradyrhizobium sp. UASWS1016 [MDEP]
201287
201362
+
Lys
TTT
[ENA]
¡û
>W1911245282
NSJY01000014
Alphaproteobacteria
Bradyrhizobium sp. UFLA03-84 [NSJY]
1302490
1302415
-
Lys
TTT
[ENA]
¡û
>W1911409874
NWTG01000004
Alphaproteobacteria
Bradyrhizobium sp. C9 [NWTG]
191269
191344
+
Lys
TTT
[ENA]
¡û
>W1911629567
PSRS01000151
Alphaproteobacteria
Bradyrhizobium sp. Leo121 [PSRS]
18549
18474
-
Lys
TTT
[ENA]
¡û
>W1810089292
PGEQ01000001
Alphaproteobacteria
Bradyrhizobium lablabi GAS165 [PGEQ]
2906466
2906391
-
Lys
TTT
[ENA]
¡û
>W1810089622
PGEV01000001
Alphaproteobacteria
Afipia broomeae GAS525 [PGEV]
1943659
1943734
+
Lys
TTT
[ENA]
¡û
>W1810367857
PVYZ01000001
Alphaproteobacteria
Rhizobium tropici NFR14 [PVYZ]
25753
25678
-
Lys
TTT
[ENA]
¡û
>W1810395519
PYCM01000020
Alphaproteobacteria
Bradyrhizobium algeriense RST89 [PYCM]
12431
12356
-
Lys
TTT
[ENA]
¡û
>W1810395604
PYCN01000007
Alphaproteobacteria
Bradyrhizobium algeriense RST91 [PYCN]
34072
34147
+
Lys
TTT
[ENA]
¡û
>W1810400089
PYFV01000002
Alphaproteobacteria
Bradyrhizobium sp. MOS004 [PYFV]
101137
101212
+
Lys
TTT
[ENA]
¡û
>W1810672304
QJTI01000005
Alphaproteobacteria
Rhodopseudomonas faecalis JCM 11668 [QJTI]
13625
13550
-
Lys
TTT
[ENA]
¡û
>SRA1024814
SRR035084.410208
454 Sequencing (SRP001805)
126
51
-
Lys
TTT
[SRA]
>W2010096741
BJNL01000033
Alphaproteobacteria
Bradyrhizobium elkanii NBRC 14791 [BJNL]
3199
3274
+
Lys
TTT
[ENA]
¡û
>W2010150160
CAADFB020000026
Alphaproteobacteria
Bradyrhizobium sp. CI-41S [CAADFB]
38481
38406
-
Lys
TTT
[ENA]
¡û
>W2010150213
CAADFC020000020
Alphaproteobacteria
Bradyrhizobium sp. CI-1B [CAADFC]
105752
105677
-
Lys
TTT
[ENA]
¡û
>W2010519001
JAAMRM010000011
Alphaproteobacteria
Bradyrhizobium sp. BL [JAAMRM]
666678
666753
+
Lys
TTT
[ENA]
¡û
>W2010530195
JAAOLD020000001
Alphaproteobacteria
Bradyrhizobium sp. 41S5 [JAAOLD]
7992976
7993051
+
Lys
TTT
[ENA]
¡û
>W2010530232
JAAOLE020000001
Alphaproteobacteria
Bradyrhizobium sp. 1S1 [JAAOLE]
4652467
4652542
+
Lys
TTT
[ENA]
¡û
>W2010530288
JAAOLF020000003
Alphaproteobacteria
Bradyrhizobium sp. 2S1 [JAAOLF]
2892140
2892065
-
Lys
TTT
[ENA]
¡û
>W2010572914
JAAVLW010000011
Alphaproteobacteria
Bradyrhizobium sp. WSM 1744 [JAAVLW]
114010
113935
-
Lys
TTT
[ENA]
¡û
>W2010572958
JAAVLX010000009
Alphaproteobacteria
Bradyrhizobium sp. WSM 1791 [JAAVLX]
160804
160879
+
Lys
TTT
[ENA]
¡û
>W2010703718
JACHIJ010000001
Alphaproteobacteria
Afipia massiliensis DSM 17498 [JACHIJ]
84135
84060
-
Lys
TTT
[ENA]
¡û
>W2010754575
JHAA01000002
Alphaproteobacteria
Rhodopseudomonas palustris PSBS [JHAA]
18088
18013
-
Lys
TTT
[ENA]
¡û
>W2010827270
MDEP01000041
Alphaproteobacteria
Bradyrhizobium sp. UASWS1016 [MDEP]
201287
201362
+
Lys
TTT
[ENA]
¡û
>W2011070183
NSJY01000014
Alphaproteobacteria
Bradyrhizobium sp. UFLA03-84 [NSJY]
1302490
1302415
-
Lys
TTT
[ENA]
¡û
>W2011136712
NWTG01000004
Alphaproteobacteria
Bradyrhizobium sp. C9 [NWTG]
191269
191344
+
Lys
TTT
[ENA]
¡û
>W2011219818
PSRS01000151
Alphaproteobacteria
Bradyrhizobium sp. Leo121 [PSRS]
18549
18474
-
Lys
TTT
[ENA]
¡û
>W2011555700
SEMA01000038
Alphaproteobacteria
Bradyrhizobium elkanii BR29 [SEMA]
2879
2804
-
Lys
TTT
[ENA]
¡û
>W2011641605
SMYJ01000011
Alphaproteobacteria
Bradyrhizobium sp. BR2003 [SMYJ]
95394
95319
-
Lys
TTT
[ENA]
¡û
>W2011645556
SNUC01000011
Alphaproteobacteria
Bradyrhizobium brasilense UFLA0613 [SNUC]
9220
9145
-
Lys
TTT
[ENA]
¡û
>W2011701288
SWAN01000133
Alphaproteobacteria
Bradyrhizobium elkanii SEMIA 5019 [SWAN]
9207
9282
+
Lys
TTT
[ENA]
¡û
>W2011701359
SWAO01000107
Alphaproteobacteria
Bradyrhizobium elkanii SEMIA 587 [SWAO]
34195
34120
-
Lys
TTT
[ENA]
¡û
>W2011756489
SZZP01000015
Alphaproteobacteria
Bradyrhizobium elkanii Semia 938 [SZZP]
93664
93739
+
Lys
TTT
[ENA]
¡û
>W2012044734
VITY01000001
Alphaproteobacteria
Bradyrhizobium macuxiense BR 10355 [VITY]
51148
51223
+
Lys
TTT
[ENA]
¡û
>W2012070410
VKHP01000191
Alphaproteobacteria
Bradyrhizobium uaiense UFLA 03-164 [VKHP]
18248
18173
-
Lys
TTT
[ENA]
¡û
>W2012425417
WQNF01000029
Alphaproteobacteria
Bradyrhizobium pachyrhizi 1040 [WQNF]
91532
91607
+
Lys
TTT
[ENA]
¡û
>W2110068637
BOVL01000024
Alphaproteobacteria
Bradyrhizobium sp. RD5-C2 [BOVL]
134895
134970
+
Lys
TTT
[ENA]
¡û
>W2110160892
JAAVUS010000017
Alphaproteobacteria
Bradyrhizobium sp. dw_78 [JAAVUS]
31909
31834
-
Lys
TTT
[ENA]
¡û
>W2110161097
JAAVUY010000021
Alphaproteobacteria
Bradyrhizobium sp. dw_411 [JAAVUY]
68910
68835
-
Lys
TTT
[ENA]
¡û
>W2110396657
JADYVV010000030
Alphaproteobacteria
Bradyrhizobium sp. BRP56 [JADYVV]
54239
54314
+
Lys
TTT
[ENA]
¡û
>W2110396765
JADYVX010000037
Alphaproteobacteria
Bradyrhizobium sp. BRP22 [JADYVX]
60525
60600
+
Lys
TTT
[ENA]
¡û
>W2110471861
JAFCJH010000101
Alphaproteobacteria
Bradyrhizobium jicamae SZCCT0434 [JAFCJH]
9377
9452
+
Lys
TTT
[ENA]
¡û
>W2110472633
JAFCJX010000041
Alphaproteobacteria
Bradyrhizobium jicamae SZCCT0349 [JAFCJX]
50830
50755
-
Lys
TTT
[ENA]
¡û
>W2110472982
JAFCKF010000002
Alphaproteobacteria
Bradyrhizobium tropiciagri SZCCT0338 [JAFCKF]
619883
619958
+
Lys
TTT
[ENA]
¡û
>W2110473089
JAFCKH010000007
Alphaproteobacteria
Bradyrhizobium tropiciagri SZCCT0294 [JAFCKH]
368148
368073
-
Lys
TTT
[ENA]
¡û
>W2110473499
JAFCKQ010000009
Alphaproteobacteria
Bradyrhizobium jicamae SZCCT0215 [JAFCKQ]
191429
191354
-
Lys
TTT
[ENA]
¡û
>W2110473681
JAFCKU010000002
Alphaproteobacteria
Bradyrhizobium viridifuturi SZCCT0140 [JAFCKU]
539246
539171
-
Lys
TTT
[ENA]
¡û
>W2110473875
JAFCKY010000004
Alphaproteobacteria
Bradyrhizobium viridifuturi SZCCT0136 [JAFCKY]
33996
34071
+
Lys
TTT
[ENA]
¡û
>W2110473916
JAFCKZ010000003
Alphaproteobacteria
Bradyrhizobium viridifuturi SZCCT0135 [JAFCKZ]
250654
250729
+
Lys
TTT
[ENA]
¡û
>W2110474115
JAFCLD010000004
Alphaproteobacteria
Bradyrhizobium viridifuturi SZCCT0127 [JAFCLD]
33996
34071
+
Lys
TTT
[ENA]
¡û
>W2110474329
JAFCLI010000002
Alphaproteobacteria
Bradyrhizobium viridifuturi SZCCT0108 [JAFCLI]
33582
33657
+
Lys
TTT
[ENA]
¡û
>W2110474379
JAFCLJ010000004
Alphaproteobacteria
Bradyrhizobium viridifuturi SZCCT0101 [JAFCLJ]
33996
34071
+
Lys
TTT
[ENA]
¡û
>W2110474480
JAFCLL010000003
Alphaproteobacteria
Bradyrhizobium viridifuturi SZCCT0052 [JAFCLL]
33636
33711
+
Lys
TTT
[ENA]
¡û
>W2110474515
JAFCLM010000002
Alphaproteobacteria
Bradyrhizobium viridifuturi SZCCT0047 [JAFCLM]
99209
99284
+
Lys
TTT
[ENA]
¡û
>W2110474564
JAFCLN010000002
Alphaproteobacteria
Bradyrhizobium lablabi SZCCT0009 [JAFCLN]
316463
316388
-
Lys
TTT
[ENA]
¡û
>W2110474713
JAFCLQ010000013
Alphaproteobacteria
Bradyrhizobium elkanii SZCCT0424 [JAFCLQ]
42767
42692
-
Lys
TTT
[ENA]
¡û
>W2110474756
JAFCLR010000009
Alphaproteobacteria
Bradyrhizobium sp. AUGA SZCCT0431 [JAFCLR]
138825
138900
+
Lys
TTT
[ENA]
¡û
>W2110474854
JAFCLS010000043
Alphaproteobacteria
Bradyrhizobium sp. JYMT SZCCT0428 [JAFCLS]
9864
9939
+
Lys
TTT
[ENA]
¡û
>W2110474944
JAFCLU010000019
Alphaproteobacteria
Bradyrhizobium sp. AUGA SZCCT0283 [JAFCLU]
4056
3981
-
Lys
TTT
[ENA]
¡û
>W2110475008
JAFCLV010000025
Alphaproteobacteria
Bradyrhizobium sp. AUGA SZCCT0274 [JAFCLV]
10811
10886
+
Lys
TTT
[ENA]
¡û
>W2110475034
JAFCLW010000009
Alphaproteobacteria
Bradyrhizobium sp. AUGA SZCCT0240 [JAFCLW]
155623
155698
+
Lys
TTT
[ENA]
¡û
>W2110475081
JAFCLX010000001
Alphaproteobacteria
Bradyrhizobium sp. AUGA SZCCT0222 [JAFCLX]
121582
121507
-
Lys
TTT
[ENA]
¡û
>W2110475139
JAFCLY010000008
Alphaproteobacteria
Bradyrhizobium sp. AUGA SZCCT0182 [JAFCLY]
82100
82175
+
Lys
TTT
[ENA]
¡û
>W2110475217
JAFCLZ010000009
Alphaproteobacteria
Bradyrhizobium sp. JYMT SZCCT0180 [JAFCLZ]
105608
105533
-
Lys
TTT
[ENA]
¡û
>W2110475260
JAFCMA010000002
Alphaproteobacteria
Bradyrhizobium sp. AUGA SZCCT0177 [JAFCMA]
266536
266461
-
Lys
TTT
[ENA]
¡û
>W2110475343
JAFCMB010000010
Alphaproteobacteria
Bradyrhizobium sp. AUGA SZCCT0176 [JAFCMB]
134252
134177
-
Lys
TTT
[ENA]
¡û
>W2110475407
JAFCMC010000020
Alphaproteobacteria
Bradyrhizobium sp. AUGA SZCCT0169 [JAFCMC]
9462
9537
+
Lys
TTT
[ENA]
¡û
>W2110475430
JAFCMD010000004
Alphaproteobacteria
Bradyrhizobium sp. AUGA SZCCT0160 [JAFCMD]
202327
202402
+
Lys
TTT
[ENA]
¡û
>W2110475543
JAFCME010000056
Alphaproteobacteria
Bradyrhizobium sp. AUGA SZCCT0158 [JAFCME]
9661
9736
+
Lys
TTT
[ENA]
¡û
>W2110475660
JAFCMH010000006
Alphaproteobacteria
Bradyrhizobium sp. AUGA SZCCT0124 [JAFCMH]
625501
625426
-
Lys
TTT
[ENA]
¡û
>W2110475819
JAFCMK010000013
Alphaproteobacteria
Bradyrhizobium sp. AUGA SZCCT0105 [JAFCMK]
37077
37152
+
Lys
TTT
[ENA]
¡û
>W2110475865
JAFCML010000014
Alphaproteobacteria
Bradyrhizobium sp. AUGA SZCCT0051 [JAFCML]
94524
94449
-
Lys
TTT
[ENA]
¡û
>W2110475933
JAFCMN010000003
Alphaproteobacteria
Bradyrhizobium sp. AUGA SZCCT0045 [JAFCMN]
827855
827780
-
Lys
TTT
[ENA]
¡û
>W2110476014
JAFCMO010000024
Alphaproteobacteria
Bradyrhizobium sp. AUGA SZCCT0042 [JAFCMO]
89354
89279
-
Lys
TTT
[ENA]
¡û
>W2110500486
JAFICZ010000001
Alphaproteobacteria
Bradyrhizobium elkanii USDA 406 [JAFICZ]
7450823
7450898
+
Lys
TTT
[ENA]
¡û
>W2110554119
JAGIOM010000001
Alphaproteobacteria
Bradyrhizobium elkanii USDA 130 [JAGIOM]
688390
688465
+
Lys
TTT
[ENA]
¡û
>W2110558602
JAGKJJ010000001
Alphaproteobacteria
Bradyrhizobium sp. WSM 1704 [JAGKJJ]
165426
165501
+
Lys
TTT
[ENA]
¡û
>W2110558653
JAGKJK010000001
Alphaproteobacteria
Bradyrhizobium sp. WSM 1738 [JAGKJK]
653547
653622
+
Lys
TTT
[ENA]
¡û
>W2110558722
JAGKJL010000031
Alphaproteobacteria
Bradyrhizobium sp. WSM 4400 [JAGKJL]
78714
78789
+
Lys
TTT
[ENA]
¡û
>W2110577221
JAGWDJ010000056
Alphaproteobacteria
Bradyrhizobium sp. sBnM-33 [JAGWDJ]
14691
14766
+
Lys
TTT
[ENA]
¡û
>W2110577257
JAGWDK010000023
Alphaproteobacteria
Bradyrhizobium sp. sGM-13 [JAGWDK]
106789
106864
+
Lys
TTT
[ENA]
¡û
>W2110597176
JAHEAG010000011
Alphaproteobacteria
Bradyrhizobium sp. SRL28 [JAHEAG]
99492
99567
+
Lys
TTT
[ENA]
¡û
>C211035763
CP030036
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 21365 [CP030036]
4803648
4803573
-
Lys
TTT
-
¡û
>C211035784
CP030037
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 51753 [CP030037]
4931483
4931558
+
Lys
TTT
-
¡û
>C211035883
CP030047
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 53421 [CP030047]
5126027
5126102
+
Lys
TTT
-
¡û
>C211146561
CP061378
Alphaproteobacteria
Bradyrhizobium genosp. L BDV5419 [CP061378]
4005864
4005939
+
Lys
TTT
-
¡û
>C211258483
CP069300
Alphaproteobacteria
Bradyrhizobium sp. PSBB068 [CP069300]
3487019
3486944
-
Lys
TTT
-
¡û
>C231102141
CP064689
Alphaproteobacteria
Bradyrhizobium sp. 200 [CP064689]
4042554
4042479
-
Lys
TTT
-
¡û
>C231107161
CP066356
Alphaproteobacteria
Bradyrhizobium elkanii USDA 76 [CP066356]
4973172
4973247
+
Lys
TTT
-
¡û
>C231182581
CP083721
Alphaproteobacteria
Bradyrhizobium sp. 41S5 [CP083721]
4210703
4210628
-
Lys
TTT
-
¡û
>C231249004
CP088022
Alphaproteobacteria
Bradyrhizobium quebecense 66S1MB [CP088022]
2791701
2791776
+
Lys
TTT
-
¡û
>C231252816
CP088285
Alphaproteobacteria
Bradyrhizobium septentrionale 1S1 [CP088285]
7687394
7687469
+
Lys
TTT
-
¡û
>C231252884
CP088288
Alphaproteobacteria
Bradyrhizobium septentrionale 162S2 [CP088288]
7214860
7214785
-
Lys
TTT
-
¡û
>C241000027
AP013103
Alphaproteobacteria
Bradyrhizobium elkanii USDA 61 [AP013103]
5801719
5801794
+
Lys
TTT
-
¡û
>C241024322
CP022222
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 051011 [CP022222]
7052006
7052081
+
Lys
TTT
-
¡û
>C241063297
CP042175
Alphaproteobacteria
Bradyrhizobium sp. KBS0725 [CP042175]
3742827
3742752
-
Lys
TTT
-
¡û
>C241063343
CP042176
Alphaproteobacteria
Bradyrhizobium sp. KBS0727 [CP042176]
3742841
3742766
-
Lys
TTT
-
¡û
>C241070659
CP042968
Alphaproteobacteria
Bradyrhizobium paxllaeri LMTR 21 [CP042968]
4443193
4443268
+
Lys
TTT
-
¡û
>C241135665
CP049289
Alphaproteobacteria
Bradyrhizobium sp. 6(2017) 1S3 [CP049289]
5058116
5058041
-
Lys
TTT
-
¡û
>W2110803263
WVUF01000004
Alphaproteobacteria
Bradyrhizobium neotropicale MPMI1 [WVUF]
476288
476213
-
Lys
TTT
[ENA]
¡û
>C241196009
CP100604
Alphaproteobacteria
Bradyrhizobium sp. Ash2021 [CP100604]
4819941
4819866
-
Lys
TTT
-
¡û
>C241244896
CP121646
Alphaproteobacteria
Bradyrhizobium brasilense CB627 [CP121646]
4895996
4896071
+
Lys
TTT
-
¡û
>C241244974
CP121647
Alphaproteobacteria
Bradyrhizobium sp. CB3481 [CP121647]
4097241
4097166
-
Lys
TTT
-
¡û
>C241245282
CP121667
Alphaproteobacteria
Bradyrhizobium pachyrhizi CB1923 [CP121667]
4778328
4778253
-
Lys
TTT
-
¡û
>C241263492
CP126007
Alphaproteobacteria
Bradyrhizobium elkanii USDA 94 [CP126007]
5098582
5098657
+
Lys
TTT
-
¡û
>C241269723
CP126533
Alphaproteobacteria
Afipia sp. [CP126533]
1695971
1696046
+
Lys
TTT
-
¡û
>W2310017918
BQUV01000002
Alphaproteobacteria
Bradyrhizobium sp. Ce-3 [BQUV]
702303
702378
+
Lys
TTT
[ENA]
¡û
>W1511507976
JXOF01000177
Alphaproteobacteria
Bradyrhizobium elkanii UASWS1015 [JXOF]
202729
202804
+
Lys
TTT
[ENA]
¡û
>W1511591972
LBIA01000001
Alphaproteobacteria
Afipia massiliensis LC387 [LBIA]
12722
12797
+
Lys
TTT
[ENA]
¡û
>W1511681375
LFIP01000016
Alphaproteobacteria
Bradyrhizobium embrapense SEMIA 6208 [LFIP]
6823
6898
+
Lys
TTT
[ENA]
¡û
>W1511681464
LFIQ01000058
Alphaproteobacteria
Bradyrhizobium pachyrhizi PAC 48 [LFIQ]
170553
170478
-
Lys
TTT
[ENA]
¡û
>W1511684037
LFLZ01000040
Alphaproteobacteria
Bradyrhizobium tropiciagri SEMIA 6148 [LFLZ]
2390
2315
-
Lys
TTT
[ENA]
¡û
>W1511706012
LGTB01000043
Alphaproteobacteria
Bradyrhizobium viridifuturi SEMIA 690 [LGTB]
74263
74338
+
Lys
TTT
[ENA]
¡û
>W11168450
AFOF01000025
Alphaproteobacteria
Bradyrhizobiaceae bacterium SG-6C [AFOF]
125798
125873
+
Lys
TTT
[ENA]
¡û
>C161097216
CP016428
Alphaproteobacteria
Bradyrhizobium icense LMTR 13 [CP016428]
4198003
4197928
-
Lys
TTT
[Ensembl]
¡û
>W121062452
AJJK01001127
Alphaproteobacteria
Bradyrhizobium elkanii 587 [AJJK]
3315
3390
+
Lys
TTT
[ENA]
¡û
>W121065228
AJPV01000628
Alphaproteobacteria
Bradyrhizobium elkanii CCBAU 05737 [AJPV]
4032
3957
-
Lys
TTT
[ENA]
¡û
>W121065268
AJPW01000525
Alphaproteobacteria
Bradyrhizobium elkanii CCBAU 43297 [AJPW]
5673
5598
-
Lys
TTT
[ENA]
¡û
>W1610049393
BBEX01000286
Alphaproteobacteria
Bradyrhizobium sp. 17-4 [BBEX]
3294
3369
+
Lys
TTT
[ENA]
¡û
>W1610666785
LJYE01000084
Alphaproteobacteria
Bradyrhizobium pachyrhizi [LJYE]
15090
15165
+
Lys
TTT
[ENA]
¡û
>W1610717419
LLXZ01000227
Alphaproteobacteria
Bradyrhizobium jicamae [LLXZ]
69693
69618
-
Lys
TTT
[ENA]
¡û
>W1610717459
LLYA01000178
Alphaproteobacteria
Bradyrhizobium retamae [LLYA]
31187
31112
-
Lys
TTT
[ENA]
¡û
>W1610717531
LLYB01000132
Alphaproteobacteria
Bradyrhizobium lablabi [LLYB]
24850
24775
-
Lys
TTT
[ENA]
¡û
>W1610912742
LSIN01000282
Alphaproteobacteria
Bradyrhizobium sp. CCH10-C7 [LSIN]
1155
1080
-
Lys
TTT
[ENA]
¡û
>W1611061251
MAXB01000064
Alphaproteobacteria
Bradyrhizobium paxllaeri [MAXB]
56331
56256
-
Lys
TTT
[ENA]
¡û
>W1611061301
MAXC01000033
Alphaproteobacteria
Bradyrhizobium sp. LMTR 3 [MAXC]
564570
564495
-
Lys
TTT
[ENA]
¡û
>W1710045792
BBEX01000286
Alphaproteobacteria
Bradyrhizobium sp. 17-4 [BBEX]
3294
3369
+
Lys
TTT
[ENA]
¡û
>W1710513051
FMZW01000014
Alphaproteobacteria
Bradyrhizobium brasilense R5 [FMZW]
9224
9299
+
Lys
TTT
[ENA]
¡û
>W1710594263
FSRD01000001
Alphaproteobacteria
Bradyrhizobium erythrophlei [FSRD]
7425059
7424984
-
Lys
TTT
[ENA]
¡û
>W1710735585
LGHK01000070
Alphaproteobacteria
Bradyrhizobium sp. NAS96.2 [LGHK]
41070
40995
-
Lys
TTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
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Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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