tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.51479 (105 seq.)
>W1710821647 LKTU01000034 Betaproteobacteria Variovorax paradoxus [LKTU] 25843 25930 + Ser TGA [ENA] ¡û
>W1710821751 LKTW01000112 Betaproteobacteria Variovorax paradoxus [LKTW] 6490 6403 - Ser TGA [ENA] ¡û
>W1710821791 LKTX01000028 Betaproteobacteria Variovorax paradoxus [LKTX] 26766 26853 + Ser TGA [ENA] ¡û
>W1710821847 LKTY01000065 Betaproteobacteria Variovorax paradoxus [LKTY] 25843 25930 + Ser TGA [ENA] ¡û
>W1710821902 LKTZ01000093 Betaproteobacteria Variovorax paradoxus [LKTZ] 25809 25896 + Ser TGA [ENA] ¡û
>W1710867457 LMIH01000011 Betaproteobacteria Acidovorax sp. Root217 [LMIH] 151357 151444 + Ser TGA [ENA] ¡û
>W1711259812 LYVO01000009 Betaproteobacteria Variovorax sp. KK3 [LYVO] 4620 4533 - Ser TGA [ENA] ¡û
>W1711384893 MEDM01000231 Betaproteobacteria Acidovorax sp. SCN 65-28 [MEDM] 10176 10089 - Ser TGA [ENA] ¡û
>W1711386841 MEFV01000007 Betaproteobacteria Comamonas sp. SCN 67-35 [MEFV] 130566 130653 + Ser TGA [ENA] ¡û
>W1711394759 MERR01000002 Betaproteobacteria Burkholderiales bacterium GWA2_64_37 [MERR] 200698 200785 + Ser TGA [ENA] ¡û
>W1711394818 MERS01000010 Betaproteobacteria Burkholderiales bacterium GWE1_65_30 [MERS] 261377 261464 + Ser TGA [ENA] ¡û
>W1711394862 MERT01000022 Betaproteobacteria Burkholderiales bacterium GWF1_66_17 [MERT] 261246 261333 + Ser TGA [ENA] ¡û
>W1711504545 MKUR01000010 Betaproteobacteria Burkholderiales bacterium 66-26 [MKUR] 130559 130646 + Ser TGA [ENA] ¡û
>W1712049921 NFUT01000001 Betaproteobacteria Hydrogenophaga sp. IBVHS2 [NFUT] 341816 341729 - Ser TGA [ENA] ¡û
>W1712049968 NFUU01000001 Betaproteobacteria Hydrogenophaga sp. IBVHS1 [NFUU] 2847856 2847943 + Ser TGA [ENA] ¡û
>C171049671 CP016447 Betaproteobacteria Acidovorax sp. RAC01 [CP016447] 677531 677618 + Ser TGA - ¡û
>C171118186 CP021362 Betaproteobacteria Acidovorax carolinensis P3 [CP021362] 841883 841796 - Ser TGA - ¡û
>C171120962 CP021648 Betaproteobacteria Acidovorax sp. T1 [CP021648] 954028 953941 - Ser TGA - ¡û
>C000121 CP000512 Betaproteobacteria Paracidovorax citrulli AAC00-1 [CP000512] 3907100 3907187 + Ser TGA [Ensembl] ¡û
>WENV180284306 OBID01027272 [OBID] metagenome; sludge 389 476 + Ser TGA [ENA] ¡û
>W141169071 AXVM01000013 Betaproteobacteria Comamonas badia DSM 17552 [AXVM] 17575 17488 - Ser TGA [ENA] ¡û
>W141170371 AXXS01000026 Betaproteobacteria Variovorax sp. JGI 0001013-M04 [AXXS] 2756 2843 + Ser TGA [ENA] ¡û
>W141170380 AXXT01000021 Betaproteobacteria Variovorax sp. JGI 0001013-L10 [AXXT] 1102 1015 - Ser TGA [ENA] ¡û
>WENV183729551 PJTQ01065732 [PJTQ] soil metagenome; Soil (3) enriched on wood chips 208 121 - Ser TGA [ENA] ¡û
>WENV183734506 PJTZ01013161 [PJTZ] soil metagenome; Soil enriched (2) on filter paper 693 606 - Ser TGA [ENA] ¡û
>WENV183744865 PJUL01000470 [PJUL] feces metagenome; Chicken feces enriched on filter paper 25194 25107 - Ser TGA [ENA] ¡û
>WENV170011552 APMI01073770 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 2241 2328 + Ser TGA [ENA] ¡û
>WENV170654923 JRYL01089915 [JRYL] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater from different 557 644 + Ser TGA [ENA] ¡û
>WENV170706973 LNAP01010123 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 2329 2416 + Ser TGA [ENA] ¡û
>WENV170707041 LNAP01011321 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 10 97 + Ser TGA [ENA] ¡û
>WENV170708013 LNAP01044055 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 10 97 + Ser TGA [ENA] ¡û
>WENV170711538 LNFM01005756 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 11996 11909 - Ser TGA [ENA] ¡û
>WENV170974497 MTKY01063648 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 1512 1425 - Ser TGA [ENA] ¡û
>C191063763 CP029373 Betaproteobacteria Paracidovorax citrulli M6 [CP029373] 661659 661746 + Ser TGA - ¡û
>W09105967 AASD01000029 Betaproteobacteria Acidovorax sp. JS42 [AASD] 12809 12896 + Ser TGA [ENA] ¡û
>W09133933 ACQT01000097 Betaproteobacteria Acidovorax delafieldii 2AN [ACQT] 239 326 + Ser TGA [ENA] ¡û
>W141558079 JHVQ01000005 Betaproteobacteria Variovorax sp. URHB0020 [JHVQ] 316756 316669 - Ser TGA [ENA] ¡û
>W1910179187 BJHU01000021 Betaproteobacteria Acidovorax sp. NB1 [BJHU] 102448 102535 + Ser TGA [ENA] ¡û
>W1910699801 MERW01000012 Betaproteobacteria Burkholderiales bacterium RIFCSPHIGHO2_02_FULL_64_19 [MERW] 25326 25413 + Ser TGA [ENA] ¡û
>W1910972099 NKDB02000002 Betaproteobacteria Alicycliphilus denitrificans BQ1 [NKDB] 294461 294548 + Ser TGA [ENA] ¡û
>W1911770721 QXJC01000001 Betaproteobacteria Simplicispira sp. NY-02 [QXJC] 1210760 1210847 + Ser TGA [ENA] ¡û
>W1810046192 NNBQ01000003 Betaproteobacteria Variovorax sp. B4 [NNBQ] 57254 57167 - Ser TGA [ENA] ¡û
>W1810046291 NNBR01000004 Betaproteobacteria Variovorax sp. B2 [NNBR] 57255 57168 - Ser TGA [ENA] ¡û
>W1810392038 PXZZ01000011 Betaproteobacteria Variovorax sp. WS11 [PXZZ] 117519 117432 - Ser TGA [ENA] ¡û
>W1810683038 QKVP01000002 Betaproteobacteria Acidovorax sp. ST3 [QKVP] 634580 634667 + Ser TGA [ENA] ¡û
>SRA1014665 SRR023845.250515 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 205 118 - Ser TGA [SRA]
>SRA1016263 SRR023846.427371 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 246 159 - Ser TGA [SRA]
>SRA1019743 SRR035082.516512 454 Sequencing (SRP001803) 342 429 + Ser TGA [SRA]
>W2010308718 CABWKX010000004 Betaproteobacteria Burkholderiales bacterium 8X [CABWKX] 113470 113383 - Ser TGA [ENA] ¡û
>W2010469821 JAAGOW010000001 Betaproteobacteria Variovorax sp. WS11 [JAAGOW] 1556077 1555990 - Ser TGA [ENA] ¡û
>W2010671993 JACCCD010000001 Betaproteobacteria Acidovorax sp. YL-MeA13-2016 [JACCCD] 6062584 6062497 - Ser TGA [ENA] ¡û
>W2010833227 MERW01000012 Betaproteobacteria Burkholderiales bacterium RIFCSPHIGHO2_02_FULL_64_19 [MERW] 25326 25413 + Ser TGA [ENA] ¡û
>W2010918681 MWOK01000003 Betaproteobacteria Acidovorax sp. SRB_14 [MWOK] 62182 62269 + Ser TGA [ENA] ¡û
>W2011374545 RBJA01000001 Betaproteobacteria Acidovorax sp. 94 [RBJA] 5253060 5252973 - Ser TGA [ENA] ¡û
>W2011392110 RCCC01000001 Betaproteobacteria Acidovorax sp. 106 [RCCC] 3376914 3376827 - Ser TGA [ENA] ¡û
>W2011494502 RWKI01000010 Betaproteobacteria Variovorax sp. MHTC-1 [RWKI] 92076 92163 + Ser TGA [ENA] ¡û
>W2012046906 VIVL01000001 Betaproteobacteria Variovorax sp. T529 [VIVL] 1222740 1222827 + Ser TGA [ENA] ¡û
>W2012207486 VYGV01000012 Betaproteobacteria Hydrogenophaga sp. D2P1 [VYGV] 128365 128278 - Ser TGA [ENA] ¡û
>W2110132762 CAKAKO010000001 Betaproteobacteria Xenophilus sp. Marseille-Q4582 [CAKAKO] 368555 368642 + Ser TGA [ENA] ¡û
>W2110132898 CAKASI010000006 Betaproteobacteria Acidovorax sp. Leaf73 [CAKASI] 210886 210973 + Ser TGA [ENA] ¡û
>W2110268651 JACVBS010000001 Betaproteobacteria Variovorax sp. VRV01 [JACVBS] 344513 344600 + Ser TGA [ENA] ¡û
>W2110325776 JADIJT010000001 Betaproteobacteria Acidovorax sp. SD340 [JADIJT] 73131 73218 + Ser TGA [ENA] ¡û
>W2110408885 JAEFCH010000001 Betaproteobacteria Acidovorax sp. IB03 [JAEFCH] 41111 41198 + Ser TGA [ENA] ¡û
>W2110517509 JAFMZA010000053 Betaproteobacteria Acidovorax temperans ATCC 49666 [JAFMZA] 7323 7236 - Ser TGA [ENA] ¡û
>W2110541744 JAGGNV010000048 Betaproteobacteria Variovorax paradoxus ISL-79 [JAGGNV] 72029 72116 + Ser TGA [ENA] ¡û
>W2110541797 JAGGNW010000026 Betaproteobacteria Variovorax paradoxus ISL-81 [JAGGNW] 2320 2233 - Ser TGA [ENA] ¡û
>W2110649781 JAHUWV010000001 Betaproteobacteria Acidovorax sp. sif0613 [JAHUWV] 330929 331016 + Ser TGA [ENA] ¡û
>C201306943 LR594659 Betaproteobacteria Variovorax sp. PBL-H6 [LR594659] 4884328 4884241 - Ser TGA - ¡û
>C201307078 LR594671 Betaproteobacteria Variovorax sp. PBL-E5 [LR594671] 4397871 4397785 - Ser TGA - ¡û
>C201307119 LR594675 Betaproteobacteria Variovorax sp. PBS-H4 [LR594675] 5296221 5296134 - Ser TGA - ¡û
>C211080844 CP049795 Betaproteobacteria Delftia sp. WY8 [CP049795] 1845278 1845365 + Ser TGA - ¡û
>C211138969 CP060790 Betaproteobacteria Acidovorax monticola KACC 19171 [CP060790] 4300651 4300564 - Ser TGA - ¡û
>C211172917 CP063166 Betaproteobacteria Variovorax paradoxus VAI-C [CP063166] 5631850 5631763 - Ser TGA - ¡û
>C211258689 CP069318 Betaproteobacteria Delftia lacustris R54 [CP069318] 5226633 5226720 + Ser TGA - ¡û
>C231139681 CP075183 Betaproteobacteria Hydrogenophaga taeniospiralis LT2 [CP075183] 4553945 4554032 + Ser TGA - ¡û
>C231139732 CP075184 Betaproteobacteria Acidovorax radicis 79 [CP075184] 3924904 3924991 + Ser TGA - ¡û
>C231220548 CP086023 Betaproteobacteria Acidovorax citrulli HPP21-3-3B [CP086023] 1419976 1419889 - Ser TGA - ¡û
>C231381426 CP097265 Betaproteobacteria Acidovorax sp. GBBC 712 [CP097265] 4028388 4028475 + Ser TGA - ¡û
>C231415882 CP099605 Betaproteobacteria Comamonadaceae bacterium OTU4NAUVB1 [CP099605] 756291 756378 + Ser TGA - ¡û
>C231565484 CP115182 Betaproteobacteria Diaphorobacter sp. ED-3 [CP115182] 1250586 1250499 - Ser TGA - ¡û
>C231651481 LR813084 Betaproteobacteria Delftia tsuruhatensis BB1455_hybrid [LR813084] 4721766 4721853 + Ser TGA - ¡û
>C241007156 AP022853 Betaproteobacteria Sulfurimicrobium lacus skT11 [AP022853] 3191564 3191651 + Ser TGA - ¡û
>C241050975 CP040128 Betaproteobacteria Noviherbaspirillum sp. UKPF54 [CP040128] 1167420 1167507 + Ser TGA - ¡û
>C241094130 CP045291 Betaproteobacteria Delftia tsuruhatensis TR1180 [CP045291] 5116297 5116384 + Ser TGA - ¡û
>C241175177 CP058970 Betaproteobacteria Delftia acidovorans B804 [CP058970] 5001876 5001963 + Ser TGA - ¡û
>C241276424 CP127360 Betaproteobacteria Paracidovorax citrulli KACC 18784 [CP127360] 639613 639526 - Ser TGA - ¡û
>C241276475 CP127361 Betaproteobacteria Paracidovorax citrulli KACC 18782 [CP127361] 652641 652554 - Ser TGA - ¡û
>C241276627 CP127364 Betaproteobacteria Paracidovorax citrulli KACC 17001 [CP127364] 1455853 1455766 - Ser TGA - ¡û
>C241380122 LR594662 Betaproteobacteria Variovorax sp. RA8 [LR594662] 5151961 5151874 - Ser TGA - ¡û
>C241380169 LR594666 Betaproteobacteria Variovorax sp. SRS16 [LR594666] 4471735 4471649 - Ser TGA - ¡û
>C241380213 LR594689 Betaproteobacteria Variovorax sp. WDL1 [LR594689] 1872696 1872609 - Ser TGA - ¡û
>W1511352989 JROV01001785 Betaproteobacteria Variovorax paradoxus ZNC0006 [JROV] 1401 1314 - Ser TGA [ENA] ¡û
>W11170770 AFPT01000104 Betaproteobacteria Paracidovorax oryzae subsp. avenae RS-1 [AFPT] 15236 15323 + Ser TGA [ENA] ¡û
>W1610685609 LKTU01000034 Betaproteobacteria Variovorax paradoxus [LKTU] 25843 25930 + Ser TGA [ENA] ¡û
>W1610685652 LKTV01000039 Betaproteobacteria Variovorax paradoxus [LKTV] 25843 25930 + Ser TGA [ENA] ¡û
>W1610685713 LKTW01000112 Betaproteobacteria Variovorax paradoxus [LKTW] 6490 6403 - Ser TGA [ENA] ¡û
>W1610685753 LKTX01000028 Betaproteobacteria Variovorax paradoxus [LKTX] 26766 26853 + Ser TGA [ENA] ¡û
>W1610685809 LKTY01000065 Betaproteobacteria Variovorax paradoxus [LKTY] 25843 25930 + Ser TGA [ENA] ¡û
>W1610685864 LKTZ01000093 Betaproteobacteria Variovorax paradoxus [LKTZ] 25809 25896 + Ser TGA [ENA] ¡û
>W1610727720 LMGP01000018 Betaproteobacteria Acidovorax sp. Root568 [LMGP] 175118 175031 - Ser TGA [ENA] ¡û
>W1610729891 LMIJ01000003 Betaproteobacteria Acidovorax sp. Root219 [LMIJ] 316587 316674 + Ser TGA [ENA] ¡û
>W1610744264 LMTS01000203 Betaproteobacteria Variovorax sp. WDL1 [LMTS] 16107 16194 + Ser TGA [ENA] ¡û
>W1710512954 FMZU01000015 Betaproteobacteria Variovorax sp. CF079 [FMZU] 129102 129015 - Ser TGA [ENA] ¡û
>W1710532527 FNQJ01000019 Betaproteobacteria Acidovorax soli [FNQJ] 43758 43671 - Ser TGA [ENA] ¡û
>W1710754787 LHUP01000173 Betaproteobacteria Acidovorax sp. SD340 [LHUP] 44392 44479 + Ser TGA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK