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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.53834 (272 seq.)
>W1711578739
MNQY01000142
Bacteroidota
Parabacteroides sp. merdae-related_45_40 [MNQY]
8201
8288
+
Ser
GCT
[ENA]
¡û
>W131165858
ARBX01000032
Bacteroidota
Porphyromonas levii DSM 23370 [ARBX]
248
161
-
Ser
GCT
[ENA]
¡û
>w023044
AAXE02000062
Bacteroidota
Parabacteroides merdae ATCC 43184 [AAXE]
293541
293450
-
Ser
GCT
[ENA]
¡û
>WENV180130906
OATG01001450
[OATG] human gut metagenome; faeces
8974
8887
-
Ser
GCT
[ENA]
¡û
>WENV180132825
OATI01000881
[OATI] human gut metagenome; faeces
9719
9632
-
Ser
GCT
[ENA]
¡û
>WENV180137817
OATP01000711
[OATP] human gut metagenome; faeces
8223
8310
+
Ser
GCT
[ENA]
¡û
>WENV180160416
OAVC01000640
[OAVC] human gut metagenome; faeces
8974
8887
-
Ser
GCT
[ENA]
¡û
>WENV180161355
OAVD01007856
[OAVD] human gut metagenome; faeces
165
78
-
Ser
GCT
[ENA]
¡û
>WENV180173810
OAWA01000892
[OAWA] human gut metagenome; faeces
8223
8310
+
Ser
GCT
[ENA]
¡û
>WENV180184766
OAWS01001855
[OAWS] human gut metagenome; faeces
4602
4689
+
Ser
GCT
[ENA]
¡û
>WENV180189579
OAWY01000427
[OAWY] human gut metagenome; faeces
8221
8308
+
Ser
GCT
[ENA]
¡û
>WENV180193608
OAZW01001326
[OAZW] human gut metagenome; faeces
149
62
-
Ser
GCT
[ENA]
¡û
>WENV180195790
OAZZ01000755
[OAZZ] human gut metagenome; faeces
8204
8291
+
Ser
GCT
[ENA]
¡û
>WENV180213331
OBAO01001035
[OBAO] human gut metagenome; human gut
10038
10125
+
Ser
GCT
[ENA]
¡û
>W141021750
AJPU01000027
Bacteroidota
Parabacteroides merdae CL09T00C40 [AJPU]
157520
157433
-
Ser
GCT
[ENA]
¡û
>WENV180236931
OBCW01011979
[OBCW] human gut metagenome; human gut
633
546
-
Ser
GCT
[ENA]
¡û
>WENV180407228
OBUQ01000729
[OBUQ] human gut metagenome; faeces
8973
8886
-
Ser
GCT
[ENA]
¡û
>WENV180436939
OBWO01000161
[OBWO] human gut metagenome; faeces
60630
60543
-
Ser
GCT
[ENA]
¡û
>WENV180483841
OBZH01003189
[OBZH] human gut metagenome; faeces
306
219
-
Ser
GCT
[ENA]
¡û
>WENV180517692
OCHD01001286
[OCHD] human gut metagenome; human gut
8204
8291
+
Ser
GCT
[ENA]
¡û
>WENV180544865
OCIR01064661
[OCIR] human gut metagenome; human gut
18
105
+
Ser
GCT
[ENA]
¡û
>WENV180604342
OCPS01003707
[OCPS] human gut metagenome; human gut
8188
8275
+
Ser
GCT
[ENA]
¡û
>WENV180716564
ODFZ01000506
[ODFZ] human metagenome; G_DNA_Stool
8188
8275
+
Ser
GCT
[ENA]
¡û
>WENV180729835
ODGV01000498
[ODGV] human metagenome; G_DNA_Stool
8282
8369
+
Ser
GCT
[ENA]
¡û
>WENV180737223
ODHC01001622
[ODHC] human metagenome; G_DNA_Stool
9173
9086
-
Ser
GCT
[ENA]
¡û
>WENV180742289
ODHH01003626
[ODHH] human metagenome; G_DNA_Stool
2534
2447
-
Ser
GCT
[ENA]
¡û
>WENV180744125
ODHJ01001038
[ODHJ] human metagenome; G_DNA_Stool
1250
1163
-
Ser
GCT
[ENA]
¡û
>WENV180747278
ODHN01003533
[ODHN] human metagenome; G_DNA_Stool
8188
8275
+
Ser
GCT
[ENA]
¡û
>WENV180752806
ODHT01001778
[ODHT] human metagenome; G_DNA_Stool
6849
6762
-
Ser
GCT
[ENA]
¡û
>WENV180770760
ODIH01000669
[ODIH] human metagenome; G_DNA_Stool
34131
34044
-
Ser
GCT
[ENA]
¡û
>WENV180784210
ODIR01000039
[ODIR] human metagenome; G_DNA_Stool
159064
158977
-
Ser
GCT
[ENA]
¡û
>WENV180839937
ODKJ01000290
[ODKJ] human metagenome; G_DNA_Stool
8188
8275
+
Ser
GCT
[ENA]
¡û
>WENV180850401
ODKV01005559
[ODKV] human metagenome; G_DNA_Stool
8180
8267
+
Ser
GCT
[ENA]
¡û
>WENV180870640
ODLN01003683
[ODLN] human metagenome; G_DNA_Stool
8437
8524
+
Ser
GCT
[ENA]
¡û
>WENV180885509
ODME01003861
[ODME] human metagenome; G_DNA_Stool
8204
8291
+
Ser
GCT
[ENA]
¡û
>WENV180915216
ODTB01000257
[ODTB] human metagenome; G_DNA_Stool
47534
47447
-
Ser
GCT
[ENA]
¡û
>WENV180918817
ODTG01002882
[ODTG] human metagenome; G_DNA_Stool
175
88
-
Ser
GCT
[ENA]
¡û
>WENV180936310
ODTU01004288
[ODTU] human metagenome; G_DNA_Stool
4031
3944
-
Ser
GCT
[ENA]
¡û
>WENV181005076
ODVY01001278
[ODVY] human metagenome; G_DNA_Stool
8564
8651
+
Ser
GCT
[ENA]
¡û
>WENV181026343
ODXC01000720
[ODXC] human metagenome; G_DNA_Stool
9066
8979
-
Ser
GCT
[ENA]
¡û
>WENV181048073
ODYC01000445
[ODYC] human metagenome; G_DNA_Stool
8282
8369
+
Ser
GCT
[ENA]
¡û
>WENV181053701
ODYI01000499
[ODYI] human metagenome; G_DNA_Stool
47534
47447
-
Ser
GCT
[ENA]
¡û
>WENV181098850
OECI01000401
[OECI] human metagenome; G_DNA_Stool
47534
47447
-
Ser
GCT
[ENA]
¡û
>WENV181117519
OEFH01000626
[OEFH] human metagenome; G_DNA_Stool
35144
35057
-
Ser
GCT
[ENA]
¡û
>WENV181133581
OEGF01000689
[OEGF] human metagenome; G_DNA_Stool
13520
13433
-
Ser
GCT
[ENA]
¡û
>WENV181173332
OEIV011393772
[OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
157
68
-
Ser
GCT
[ENA]
¡û
>WENV181217468
OFCJ01000819
[OFCJ] metagenome; Human gut stool
8969
8882
-
Ser
GCT
[ENA]
¡û
>WENV181419457
OGCN01000132
[OGCN] human gut metagenome; human gut
116300
116213
-
Ser
GCT
[ENA]
¡û
>WENV181430027
OGCZ01000020
[OGCZ] metagenome; Human gut stool
191013
190926
-
Ser
GCT
[ENA]
¡û
>WENV181432316
OGDD01002306
[OGDD] metagenome; Human gut stool
3744
3657
-
Ser
GCT
[ENA]
¡û
>WENV181451003
OGDY01002125
[OGDY] metagenome; Human gut stool
8280
8367
+
Ser
GCT
[ENA]
¡û
>WENV181466459
OGEQ01007828
[OGEQ] metagenome; Human gut stool
2154
2067
-
Ser
GCT
[ENA]
¡û
>WENV181475462
OGFE01000277
[OGFE] metagenome; Human gut stool
47258
47171
-
Ser
GCT
[ENA]
¡û
>WENV181487047
OGFO01000043
[OGFO] metagenome; Human gut stool
8437
8524
+
Ser
GCT
[ENA]
¡û
>WENV181491145
OGFX01002381
[OGFX] metagenome; Human gut stool
1625
1712
+
Ser
GCT
[ENA]
¡û
>WENV181506775
OGGO01000030
[OGGO] metagenome; Human gut stool
167104
167017
-
Ser
GCT
[ENA]
¡û
>WENV181508107
OGGQ01000097
[OGGQ] metagenome; Human gut stool
106461
106374
-
Ser
GCT
[ENA]
¡û
>WENV181516098
OGGX01000358
[OGGX] metagenome; Human gut stool
9434
9521
+
Ser
GCT
[ENA]
¡û
>WENV181535912
OGHV01000657
[OGHV] metagenome; Human gut stool
19493
19406
-
Ser
GCT
[ENA]
¡û
>WENV181553976
OGIR01002932
[OGIR] metagenome; Human gut stool
6472
6559
+
Ser
GCT
[ENA]
¡û
>WENV181563881
OGJH01000614
[OGJH] metagenome; Human gut stool
8188
8275
+
Ser
GCT
[ENA]
¡û
>WENV181568900
OGJK01012228
[OGJK] metagenome; Human gut stool
854
767
-
Ser
GCT
[ENA]
¡û
>WENV181582824
OGKC01000864
[OGKC] metagenome; Human gut stool
1906
1819
-
Ser
GCT
[ENA]
¡û
>WENV181661307
OGOG01002133
[OGOG] human gut metagenome; faeces
8977
8890
-
Ser
GCT
[ENA]
¡û
>WENV181662867
OGOH01001902
[OGOH] human gut metagenome; faeces
8140
8053
-
Ser
GCT
[ENA]
¡û
>WENV181666937
OGOK01001353
[OGOK] human gut metagenome; faeces
8204
8291
+
Ser
GCT
[ENA]
¡û
>WENV181672524
OGOO01000031
[OGOO] human gut metagenome; faeces
160719
160632
-
Ser
GCT
[ENA]
¡û
>WENV181678537
OGOR01001078
[OGOR] human gut metagenome; faeces
8967
8880
-
Ser
GCT
[ENA]
¡û
>WENV181683663
OGOV01000959
[OGOV] human gut metagenome; faeces
8204
8291
+
Ser
GCT
[ENA]
¡û
>WENV181695441
OGPC01001455
[OGPC] human gut metagenome; faeces
6956
7043
+
Ser
GCT
[ENA]
¡û
>WENV181700004
OGPG01002107
[OGPG] human gut metagenome; faeces
8223
8310
+
Ser
GCT
[ENA]
¡û
>WENV181717139
OGPT01000026
[OGPT] human gut metagenome; faeces
8435
8522
+
Ser
GCT
[ENA]
¡û
>WENV181728907
OGQB01000468
[OGQB] human gut metagenome; faeces
33425
33338
-
Ser
GCT
[ENA]
¡û
>WENV181758353
OGQU01000831
[OGQU] human gut metagenome; faeces
22810
22723
-
Ser
GCT
[ENA]
¡û
>WENV181773765
OGRE01001783
[OGRE] human gut metagenome; faeces
8969
8882
-
Ser
GCT
[ENA]
¡û
>WENV181790698
OGRP01001309
[OGRP] human gut metagenome; faeces
8969
8882
-
Ser
GCT
[ENA]
¡û
>WENV181833482
OGUQ01002568
[OGUQ] metagenome; Human gut stool
6381
6294
-
Ser
GCT
[ENA]
¡û
>WENV181867694
OGWW01001171
[OGWW] human gut metagenome; faeces
8223
8310
+
Ser
GCT
[ENA]
¡û
>WENV181872218
OGWZ01001665
[OGWZ] human gut metagenome; faeces
11530
11443
-
Ser
GCT
[ENA]
¡û
>WENV181874308
OGXA01013304
[OGXA] human gut metagenome; faeces
715
628
-
Ser
GCT
[ENA]
¡û
>WENV181891843
OGXP01000041
[OGXP] human gut metagenome; faeces
8557
8644
+
Ser
GCT
[ENA]
¡û
>WENV181898320
OGXT01003754
[OGXT] human gut metagenome; faeces
8204
8291
+
Ser
GCT
[ENA]
¡û
>WENV181968445
OGZW01002294
[OGZW] human gut metagenome; faeces
6876
6789
-
Ser
GCT
[ENA]
¡û
>WENV181977945
OHAE01001585
[OHAE] human gut metagenome; faeces
8080
7993
-
Ser
GCT
[ENA]
¡û
>WENV181983054
OHAH01006888
[OHAH] human gut metagenome; faeces
2248
2335
+
Ser
GCT
[ENA]
¡û
>WENV181999525
OHAW01003414
[OHAW] human gut metagenome; feces
716
803
+
Ser
GCT
[ENA]
¡û
>WENV182038883
OHDF01001903
[OHDF] human gut metagenome; feces
1268
1355
+
Ser
GCT
[ENA]
¡û
>WENV182040691
OHDH01006594
[OHDH] human gut metagenome; feces
1967
1880
-
Ser
GCT
[ENA]
¡û
>WENV182046809
OHDW01000305
[OHDW] human gut metagenome; feces
9832
9745
-
Ser
GCT
[ENA]
¡û
>WENV182119993
OHJJ01000295
[OHJJ] human gut metagenome; feces
22355
22268
-
Ser
GCT
[ENA]
¡û
>WENV182209138
OHPZ01000430
[OHPZ] human gut metagenome; feces
8280
8367
+
Ser
GCT
[ENA]
¡û
>WENV182222273
OHQX01000690
[OHQX] human gut metagenome; feces
5370
5283
-
Ser
GCT
[ENA]
¡û
>WENV182231998
OHRN01000192
[OHRN] human gut metagenome; feces
8280
8367
+
Ser
GCT
[ENA]
¡û
>WENV182243893
OHSI01006964
[OHSI] human gut metagenome; feces
942
855
-
Ser
GCT
[ENA]
¡û
>W141227015
BAKR01000020
Bacteroidota
Porphyromonas cangingivalis JCM 15983 [BAKR]
17924
18011
+
Ser
GCT
[ENA]
¡û
>WENV182403172
OIET01001088
[OIET] human gut metagenome; human gut
6751
6838
+
Ser
GCT
[ENA]
¡û
>WENV182405118
OIEV01000819
[OIEV] human gut metagenome; human gut
9314
9401
+
Ser
GCT
[ENA]
¡û
>WENV182406522
OIEZ01013204
[OIEZ] human gut metagenome; human gut
553
640
+
Ser
GCT
[ENA]
¡û
>WENV182468419
OIOY01001579
[OIOY] human gut metagenome; human gut
2020
1933
-
Ser
GCT
[ENA]
¡û
>WENV182515570
OIWN01001662
[OIWN] human gut metagenome; faeces
9051
9138
+
Ser
GCT
[ENA]
¡û
>WENV182595150
OJIX01001626
[OJIX] metagenome; faeces
5964
6051
+
Ser
GCT
[ENA]
¡û
>WENV182606444
OJJT01011920
[OJJT] metagenome; faeces
1304
1217
-
Ser
GCT
[ENA]
¡û
>WENV182606648
OJJT01034792
[OJJT] metagenome; faeces
152
239
+
Ser
GCT
[ENA]
¡û
>WENV182619049
OJKH01000179
[OJKH] metagenome; faeces
36569
36656
+
Ser
GCT
[ENA]
¡û
>WENV182688456
OJOB01000508
[OJOB] human gut metagenome; stool sample
5683
5596
-
Ser
GCT
[ENA]
¡û
>WENV182758586
OJRI01008006
[OJRI] human gut metagenome; stool sample
1157
1070
-
Ser
GCT
[ENA]
¡û
>WENV182763182
OJRO01001402
[OJRO] human gut metagenome; stool sample
8971
8884
-
Ser
GCT
[ENA]
¡û
>WENV182768124
OJRV01004286
[OJRV] human gut metagenome; human gut
8438
8525
+
Ser
GCT
[ENA]
¡û
>WENV182771349
OJRX01005283
[OJRX] human gut metagenome; human gut
882
795
-
Ser
GCT
[ENA]
¡û
>WENV182779363
OJSD01002982
[OJSD] human gut metagenome; human gut
5729
5816
+
Ser
GCT
[ENA]
¡û
>WENV182828271
OKDF01000619
[OKDF] human gut metagenome; human gut
175
88
-
Ser
GCT
[ENA]
¡û
>WENV182839710
OKHF01000417
[OKHF] human gut metagenome; human gut
175
88
-
Ser
GCT
[ENA]
¡û
>WENV182878712
OKRZ01001643
[OKRZ] human gut metagenome; faeces
8974
8887
-
Ser
GCT
[ENA]
¡û
>WENV182896192
OKSN01006908
[OKSN] human gut metagenome; feces
2180
2093
-
Ser
GCT
[ENA]
¡û
>WENV182957196
OKWG01001682
[OKWG] human gut metagenome; human gut
5106
5193
+
Ser
GCT
[ENA]
¡û
>WENV182981722
OKYY01001337
[OKYY] human gut metagenome; human gut
1097
1184
+
Ser
GCT
[ENA]
¡û
>WENV183009565
OLDR01001785
[OLDR] human gut metagenome; human gut
1417
1504
+
Ser
GCT
[ENA]
¡û
>WENV183029729
OLFW01001660
[OLFW] human gut metagenome; faeces
9019
9106
+
Ser
GCT
[ENA]
¡û
>WENV183033369
OLFY01002974
[OLFY] human gut metagenome; faeces
8534
8621
+
Ser
GCT
[ENA]
¡û
>WENV183037353
OLGA01018704
[OLGA] human gut metagenome; faeces
1350
1263
-
Ser
GCT
[ENA]
¡û
>WENV183074744
OLIV01000814
[OLIV] human gut metagenome; stool sample
8558
8645
+
Ser
GCT
[ENA]
¡û
>WENV183110708
OLNO01001679
[OLNO] human gut metagenome; faeces
8180
8267
+
Ser
GCT
[ENA]
¡û
>WENV183112571
OLNP01000972
[OLNP] human gut metagenome; faeces
18383
18296
-
Ser
GCT
[ENA]
¡û
>WENV183163560
OLOW01016550
[OLOW] human gut metagenome; faeces
1231
1144
-
Ser
GCT
[ENA]
¡û
>WENV183179200
OLPH01001936
[OLPH] human gut metagenome; faeces
8204
8291
+
Ser
GCT
[ENA]
¡û
>WENV183179233
OLPH01002147
[OLPH] human gut metagenome; faeces
5971
5884
-
Ser
GCT
[ENA]
¡û
>WENV183240830
OLRA01020099
[OLRA] human gut metagenome; faeces
1886
1799
-
Ser
GCT
[ENA]
¡û
>WENV183321851
OLVX01000200
[OLVX] human gut metagenome; faeces
53207
53120
-
Ser
GCT
[ENA]
¡û
>WENV183378301
OLYC01000255
[OLYC] human gut metagenome; feces
37926
38013
+
Ser
GCT
[ENA]
¡û
>WENV183431199
OMBQ01001925
[OMBQ] human gut metagenome; feces
8204
8291
+
Ser
GCT
[ENA]
¡û
>WENV183436499
OMCC01008847
[OMCC] human gut metagenome; feces
1685
1598
-
Ser
GCT
[ENA]
¡û
>WENV183478505
OMFD01005063
[OMFD] human gut metagenome; feces
135
222
+
Ser
GCT
[ENA]
¡û
>WENV183491286
OMGG01000997
[OMGG] human gut metagenome; human gut
3303
3216
-
Ser
GCT
[ENA]
¡û
>WENV183492939
OMGI01002324
[OMGI] human gut metagenome; human gut
1046
959
-
Ser
GCT
[ENA]
¡û
>WENV183497372
OMGN01002192
[OMGN] human gut metagenome; feces
1601
1514
-
Ser
GCT
[ENA]
¡û
>WENV183499053
OMGP01001835
[OMGP] human gut metagenome; human gut
8188
8275
+
Ser
GCT
[ENA]
¡û
>WENV183502522
OMGT01001420
[OMGT] human gut metagenome; human gut
1966
1879
-
Ser
GCT
[ENA]
¡û
>WENV183504373
OMGV01002766
[OMGV] human gut metagenome; human gut
889
976
+
Ser
GCT
[ENA]
¡û
>WENV183530999
OOAC01000042
[OOAC] human gut metagenome; human gut
114262
114175
-
Ser
GCT
[ENA]
¡û
>WENV183554162
OOBM01001231
[OOBM] human gut metagenome; human gut
8188
8275
+
Ser
GCT
[ENA]
¡û
>WENV183555424
OOBN01002828
[OOBN] human gut metagenome; human gut
1981
1894
-
Ser
GCT
[ENA]
¡û
>WENV183568709
OOCB01005920
[OOCB] human gut metagenome; human gut
8207
8294
+
Ser
GCT
[ENA]
¡û
>WENV183582482
OOCP01002104
[OOCP] human gut metagenome; human gut
8790
8877
+
Ser
GCT
[ENA]
¡û
>WENV183599576
OODH01001917
[OODH] human gut metagenome; human gut
5789
5702
-
Ser
GCT
[ENA]
¡û
>WENV183642567
OQVN01008783
[OQVN] human gut metagenome; human gut
1624
1711
+
Ser
GCT
[ENA]
¡û
>WENV183760481
PPYE01233108
[PPYE] human gut metagenome; stool from patient with ulcerative colitis
22021
21934
-
Ser
GCT
[ENA]
¡û
>WENV183766782
PPYE01357759
[PPYE] human gut metagenome; stool from patient with ulcerative colitis
8228
8315
+
Ser
GCT
[ENA]
¡û
>WENV183769390
PPYE01414446
[PPYE] human gut metagenome; stool from patient with ulcerative colitis
1237
1150
-
Ser
GCT
[ENA]
¡û
>WENV183774086
PPYF01029517
[PPYF] human gut metagenome; stool from patient with Crohn's disease
199
112
-
Ser
GCT
[ENA]
¡û
>WENV183781470
PPYF01196760
[PPYF] human gut metagenome; stool from patient with Crohn's disease
170
83
-
Ser
GCT
[ENA]
¡û
>WENV183782959
PPYF01220929
[PPYF] human gut metagenome; stool from patient with Crohn's disease
8457
8370
-
Ser
GCT
[ENA]
¡û
>WENV183785110
PPYF01269471
[PPYF] human gut metagenome; stool from patient with Crohn's disease
1238
1151
-
Ser
GCT
[ENA]
¡û
>WENV183789454
PPYF01385283
[PPYF] human gut metagenome; stool from patient with Crohn's disease
8212
8299
+
Ser
GCT
[ENA]
¡û
>WENV170028145
CDYE01002254
[CDYE] gut metagenome; human stools
481
394
-
Ser
GCT
[ENA]
¡û
>WENV170030054
CDYH01015237
[CDYH] gut metagenome; human stools
642
555
-
Ser
GCT
[ENA]
¡û
>WENV170031437
CDYI01055195
[CDYI] gut metagenome; human stools
88
1
-
Ser
GCT
[ENA]
¡û
>WENV170031905
CDYJ01022677
[CDYJ] gut metagenome; human stools
8384
8297
-
Ser
GCT
[ENA]
¡û
>WENV170033657
CDYK01030697
[CDYK] gut metagenome; human stools
3828
3915
+
Ser
GCT
[ENA]
¡û
>WENV170034776
CDYL01021816
[CDYL] gut metagenome; human stools
612
525
-
Ser
GCT
[ENA]
¡û
>WENV170035752
CDYM01030681
[CDYM] gut metagenome; human stools
70487
70400
-
Ser
GCT
[ENA]
¡û
>WENV170037390
CDYQ01010668
[CDYQ] gut metagenome; human stools
8265
8352
+
Ser
GCT
[ENA]
¡û
>WENV170041361
CDYT01009401
[CDYT] gut metagenome; human stools
11944
11857
-
Ser
GCT
[ENA]
¡û
>WENV170042454
CDYU01008009
[CDYU] gut metagenome; human stools
262
175
-
Ser
GCT
[ENA]
¡û
>WENV170048164
CDZA01000308
[CDZA] gut metagenome; human stools
96
9
-
Ser
GCT
[ENA]
¡û
>WENV170049843
CDZB01003417
[CDZB] gut metagenome; human stools
1459
1546
+
Ser
GCT
[ENA]
¡û
>WENV170064032
CDZK01032358
[CDZK] gut metagenome; human stools
8296
8383
+
Ser
GCT
[ENA]
¡û
>WENV170067486
CDZO01013899
[CDZO] gut metagenome; human stools
23857
23770
-
Ser
GCT
[ENA]
¡û
>WENV170068862
CDZP01021814
[CDZP] gut metagenome; human stools
216
129
-
Ser
GCT
[ENA]
¡û
>WENV170069637
CDZP01050737
[CDZP] gut metagenome; human stools
85718
85631
-
Ser
GCT
[ENA]
¡û
>WENV170069782
CDZQ01002870
[CDZQ] gut metagenome; human stools
85713
85626
-
Ser
GCT
[ENA]
¡û
>WENV170076187
CDZT01058550
[CDZT] gut metagenome; human stools
12153
12066
-
Ser
GCT
[ENA]
¡û
>WENV170077343
CDZU01028998
[CDZU] gut metagenome; human stools
12153
12066
-
Ser
GCT
[ENA]
¡û
>WENV170079169
CDZV01054524
[CDZV] gut metagenome; human stools
11774
11687
-
Ser
GCT
[ENA]
¡û
>WENV170088123
CEAD01036190
[CEAD] gut metagenome; human stools
8296
8383
+
Ser
GCT
[ENA]
¡û
>WENV170092886
CEAH01002604
[CEAH] gut metagenome; human stools
8289
8376
+
Ser
GCT
[ENA]
¡û
>WENV170094527
CEAH01073972
[CEAH] gut metagenome; human stools
1868
1781
-
Ser
GCT
[ENA]
¡û
>WENV170095524
CEAJ01008188
[CEAJ] gut metagenome; human stools
8429
8516
+
Ser
GCT
[ENA]
¡û
>WENV170096103
CEAK01004096
[CEAK] gut metagenome; human stools
1022
935
-
Ser
GCT
[ENA]
¡û
>WENV170104070
CEAZ01018919
[CEAZ] gut metagenome; human stools
8540
8627
+
Ser
GCT
[ENA]
¡û
>WENV170108701
CECA01042121
[CECA] gut metagenome; human stools
8534
8621
+
Ser
GCT
[ENA]
¡û
>C191213123
LR134506
Bacteroidota
Porphyromonas cangingivalis NCTC12856 [LR134506]
2348626
2348539
-
Ser
GCT
-
¡û
>W1910371971
FUFV01000042
Bacteroidota
Parabacteroides sp. Marseille-P3160 [FUFV]
16220
16133
-
Ser
GCT
[ENA]
¡û
>W1810795332
QRKZ01000011
Bacteroidota
Parabacteroides merdae AM14-15 [QRKZ]
47726
47639
-
Ser
GCT
[ENA]
¡û
>W1810800159
QROL01000073
Bacteroidota
Parabacteroides merdae AF38-4 [QROL]
8202
8289
+
Ser
GCT
[ENA]
¡û
>W1810801611
QRPL01000009
Bacteroidota
Parabacteroides merdae AF35-4AC [QRPL]
141740
141653
-
Ser
GCT
[ENA]
¡û
>W1810802278
QRPX01000027
Bacteroidota
Parabacteroides merdae AF33-34 [QRPX]
47720
47633
-
Ser
GCT
[ENA]
¡û
>W1810803282
QRQP01000039
Bacteroidota
Parabacteroides merdae AF31-17 [QRQP]
15661
15574
-
Ser
GCT
[ENA]
¡û
>W1810805339
QRTV01000004
Bacteroidota
Parabacteroides merdae AF26-22BH [QRTV]
240569
240482
-
Ser
GCT
[ENA]
¡û
>W1810820256
QSEO01000068
Bacteroidota
Parabacteroides merdae AM48-24BH [QSEO]
8245
8332
+
Ser
GCT
[ENA]
¡û
>W1810825593
QSII01000001
Bacteroidota
Parabacteroides merdae AM34-17 [QSII]
249206
249119
-
Ser
GCT
[ENA]
¡û
>W1810827121
QSJL01000007
Bacteroidota
Parabacteroides merdae AM30-44 [QSJL]
8486
8573
+
Ser
GCT
[ENA]
¡û
>W1810829234
QSKX01000008
Bacteroidota
Parabacteroides merdae AM26-6AC [QSKX]
8161
8248
+
Ser
GCT
[ENA]
¡û
>W1810839544
QSTY01000043
Bacteroidota
Parabacteroides merdae OM06-16AC [QSTY]
10574
10487
-
Ser
GCT
[ENA]
¡û
>W2010249052
CABIXG020000005
Bacteroidota
Parabacteroides merdae [CABIXG]
377550
377463
-
Ser
GCT
[ENA]
¡û
>W2010401255
FUFV01000042
Bacteroidota
Parabacteroides sp. Marseille-P3160 [FUFV]
16220
16133
-
Ser
GCT
[ENA]
¡û
>W2011308431
QVMN01000016
Bacteroidota
Dysgonomonas sp. 25 [QVMN]
9099
9186
+
Ser
GCT
[ENA]
¡û
>W2011668327
SPGG01000046
Bacteroidota
Parabacteroides merdae 1001175st1_A1 [SPGG]
171
84
-
Ser
GCT
[ENA]
¡û
>W2011671030
SPNB01000004
Bacteroidota
Porphyromonas levii AF0918 [SPNB]
64091
64178
+
Ser
GCT
[ENA]
¡û
>W2011671115
SPNC01000194
Bacteroidota
Porphyromonas levii AF5678 [SPNC]
334
247
-
Ser
GCT
[ENA]
¡û
>W2011761887
UATO01000009
Bacteroidota
Porphyromonas cangingivalis NCTC12857 [UATO]
2284754
2284667
-
Ser
GCT
[ENA]
¡û
>W2011816003
UFTK01000001
Bacteroidota
Parabacteroides merdae NCTC13052 [UFTK]
3823497
3823410
-
Ser
GCT
[ENA]
¡û
>W2012359210
WKLI01000042
Bacteroidota
Parabacteroides merdae BIOML-A1 [WKLI]
168
81
-
Ser
GCT
[ENA]
¡û
>W2012395941
WNCN01000055
Bacteroidota
Parabacteroides merdae BIOML-A29 [WNCN]
168
81
-
Ser
GCT
[ENA]
¡û
>W2012396003
WNCO01000056
Bacteroidota
Parabacteroides merdae BIOML-A28 [WNCO]
8245
8332
+
Ser
GCT
[ENA]
¡û
>W2012396061
WNCP01000051
Bacteroidota
Parabacteroides merdae BIOML-A27 [WNCP]
8210
8297
+
Ser
GCT
[ENA]
¡û
>W2012396128
WNCQ01000064
Bacteroidota
Parabacteroides merdae BIOML-A26 [WNCQ]
1855
1768
-
Ser
GCT
[ENA]
¡û
>W2012396253
WNCS01000066
Bacteroidota
Parabacteroides merdae BIOML-A24 [WNCS]
197
110
-
Ser
GCT
[ENA]
¡û
>W2012396300
WNCT01000582
Bacteroidota
Parabacteroides merdae BIOML-A23 [WNCT]
168
81
-
Ser
GCT
[ENA]
¡û
>W2012396366
WNCU01000058
Bacteroidota
Parabacteroides merdae BIOML-A22 [WNCU]
197
110
-
Ser
GCT
[ENA]
¡û
>W2012396430
WNCV01000064
Bacteroidota
Parabacteroides merdae BIOML-A21 [WNCV]
197
110
-
Ser
GCT
[ENA]
¡û
>W2012396488
WNCW01000072
Bacteroidota
Parabacteroides merdae BIOML-A20 [WNCW]
197
110
-
Ser
GCT
[ENA]
¡û
>W2012396506
WNCX01000183
Bacteroidota
Parabacteroides merdae BIOML-A19 [WNCX]
197
110
-
Ser
GCT
[ENA]
¡û
>W2012396592
WNCY01000060
Bacteroidota
Parabacteroides merdae BIOML-A18 [WNCY]
197
110
-
Ser
GCT
[ENA]
¡û
>W2012396653
WNCZ01000071
Bacteroidota
Parabacteroides merdae BIOML-A17 [WNCZ]
197
110
-
Ser
GCT
[ENA]
¡û
>W2012396718
WNDA01000062
Bacteroidota
Parabacteroides merdae BIOML-A16 [WNDA]
197
110
-
Ser
GCT
[ENA]
¡û
>W2012396775
WNDB01000084
Bacteroidota
Parabacteroides merdae BIOML-A15 [WNDB]
197
110
-
Ser
GCT
[ENA]
¡û
>W2012396815
WNDC01000776
Bacteroidota
Parabacteroides merdae BIOML-A12 [WNDC]
168
81
-
Ser
GCT
[ENA]
¡û
>W2012396876
WNDD01000040
Bacteroidota
Parabacteroides merdae BIOML-A11 [WNDD]
8226
8313
+
Ser
GCT
[ENA]
¡û
>W2012396908
WNDE01000004
Bacteroidota
Parabacteroides merdae BIOML-A10 [WNDE]
374420
374333
-
Ser
GCT
[ENA]
¡û
>W2012396996
WNDF01000043
Bacteroidota
Parabacteroides merdae BIOML-A9 [WNDF]
8210
8297
+
Ser
GCT
[ENA]
¡û
>W2012397012
WNDG01000003
Bacteroidota
Parabacteroides merdae BIOML-A8 [WNDG]
412826
412739
-
Ser
GCT
[ENA]
¡û
>W2012397122
WNDH01000045
Bacteroidota
Parabacteroides merdae BIOML-A7 [WNDH]
1855
1768
-
Ser
GCT
[ENA]
¡û
>W2012397184
WNDI01000040
Bacteroidota
Parabacteroides merdae BIOML-A6 [WNDI]
8210
8297
+
Ser
GCT
[ENA]
¡û
>W2012397248
WNDJ01000043
Bacteroidota
Parabacteroides merdae BIOML-A5 [WNDJ]
1855
1768
-
Ser
GCT
[ENA]
¡û
>W2012397309
WNDK01000049
Bacteroidota
Parabacteroides merdae BIOML-A4 [WNDK]
168
81
-
Ser
GCT
[ENA]
¡û
>W2012397318
WNDL01000002
Bacteroidota
Parabacteroides merdae BIOML-A3 [WNDL]
357747
357660
-
Ser
GCT
[ENA]
¡û
>W2012397432
WNDM01000040
Bacteroidota
Parabacteroides merdae BIOML-A2 [WNDM]
8226
8313
+
Ser
GCT
[ENA]
¡û
>W2110077226
CACRUV010000047
Bacteroidota
Parabacteroides merdae [CACRUV]
8509
8596
+
Ser
GCT
[ENA]
¡û
>W2110158325
JAASIN010000028
Bacteroidota
Parabacteroides merdae K34_1 [JAASIN]
47557
47470
-
Ser
GCT
[ENA]
¡û
>W2110338504
JADMOA010000061
Bacteroidota
Parabacteroides merdae BSD2780120875b_170604_B5 [JADMOA]
171
84
-
Ser
GCT
[ENA]
¡û
>W2110339100
JADMOV010000049
Bacteroidota
Parabacteroides merdae 1001136B_160425_B1 [JADMOV]
8996
8909
-
Ser
GCT
[ENA]
¡û
>W2110343933
JADMVT010000033
Bacteroidota
Parabacteroides merdae 1001713B170207_170306_F10 [JADMVT]
21967
21880
-
Ser
GCT
[ENA]
¡û
>W2110344253
JADMWD010000050
Bacteroidota
Parabacteroides merdae D54t1_190329_G1 [JADMWD]
171
84
-
Ser
GCT
[ENA]
¡û
>W2110344512
JADMWK010000043
Bacteroidota
Parabacteroides merdae 1001095IJ_161003_F2 [JADMWK]
8225
8312
+
Ser
GCT
[ENA]
¡û
>W2110349540
JADNDR010000053
Bacteroidota
Parabacteroides merdae D59t2_181005_G1 [JADNDR]
8210
8297
+
Ser
GCT
[ENA]
¡û
>W2110349871
JADNEG010000046
Bacteroidota
Parabacteroides merdae 1001175B_160314_A1 [JADNEG]
171
84
-
Ser
GCT
[ENA]
¡û
>W2110351100
JADNFV010000056
Bacteroidota
Parabacteroides merdae D53t1_180928_D7 [JADNFV]
8202
8289
+
Ser
GCT
[ENA]
¡û
>W2110355908
JADNMU010000001
Bacteroidota
Parabacteroides merdae 1001283B150217_161031_E7 [JADNMU]
386121
386034
-
Ser
GCT
[ENA]
¡û
>W2110365623
JADPBS010000026
Bacteroidota
Parabacteroides merdae 1001262B_160229_F9 [JADPBS]
47557
47470
-
Ser
GCT
[ENA]
¡û
>W2110369128
JADPGN010000017
Bacteroidota
Parabacteroides merdae 1001270H_150608_G12 [JADPGN]
8180
8267
+
Ser
GCT
[ENA]
¡û
>W2110373953
JADRFP010000003
Bacteroidota
Porphyromonas levii DD51 [JADRFP]
122490
122577
+
Ser
GCT
[ENA]
¡û
>W2110373993
JADRFQ010000001
Bacteroidota
Porphyromonas levii DD50 [JADRFQ]
207
120
-
Ser
GCT
[ENA]
¡û
>W2110374032
JADRFR010000001
Bacteroidota
Porphyromonas levii DD49 [JADRFR]
200773
200860
+
Ser
GCT
[ENA]
¡û
>W2110374108
JADRFS010000046
Bacteroidota
Porphyromonas levii DD48 [JADRFS]
11457
11544
+
Ser
GCT
[ENA]
¡û
>W2110374131
JADRFT010000009
Bacteroidota
Porphyromonas levii DD47 [JADRFT]
84423
84510
+
Ser
GCT
[ENA]
¡û
>W2110374240
JADRFW010000001
Bacteroidota
Porphyromonas levii DD44 [JADRFW]
207
120
-
Ser
GCT
[ENA]
¡û
>W2110374505
JADRGB010000003
Bacteroidota
Porphyromonas levii DD39 [JADRGB]
207
120
-
Ser
GCT
[ENA]
¡û
>W2110374577
JADRGC010000041
Bacteroidota
Porphyromonas levii DD38 [JADRGC]
207
120
-
Ser
GCT
[ENA]
¡û
>W2110374961
JADRGK010000001
Bacteroidota
Porphyromonas levii DD30 [JADRGK]
200816
200903
+
Ser
GCT
[ENA]
¡û
>W2110375120
JADRGN010000036
Bacteroidota
Porphyromonas levii DD27 [JADRGN]
207
120
-
Ser
GCT
[ENA]
¡û
>W2110375219
JADRGQ010000001
Bacteroidota
Porphyromonas levii DD24 [JADRGQ]
199509
199596
+
Ser
GCT
[ENA]
¡û
>W2110375262
JADRGR010000001
Bacteroidota
Porphyromonas levii DD23 [JADRGR]
207
120
-
Ser
GCT
[ENA]
¡û
>W2110375355
JADRGT010000001
Bacteroidota
Porphyromonas levii DD21 [JADRGT]
199509
199596
+
Ser
GCT
[ENA]
¡û
>W2110375418
JADRGU010000006
Bacteroidota
Porphyromonas levii DD20 [JADRGU]
364
277
-
Ser
GCT
[ENA]
¡û
>W2110375496
JADRGW010000003
Bacteroidota
Porphyromonas levii DD18 [JADRGW]
111262
111349
+
Ser
GCT
[ENA]
¡û
>W2110375640
JADRGZ010000003
Bacteroidota
Porphyromonas levii DD15 [JADRGZ]
104259
104346
+
Ser
GCT
[ENA]
¡û
>W2110375869
JADRHD010000002
Bacteroidota
Porphyromonas levii DD11 [JADRHD]
126018
126105
+
Ser
GCT
[ENA]
¡û
>W2110636941
JAHPXH010000002
Bacteroidota
Parabacteroides merdae DFI.4.154 [JAHPXH]
232900
232813
-
Ser
GCT
[ENA]
¡û
>W2110637093
JAHPXO010000066
Bacteroidota
Parabacteroides sp. MSK.9.14 [JAHPXO]
8204
8291
+
Ser
GCT
[ENA]
¡û
>C211304145
CP072229
Bacteroidota
Parabacteroides merdae CL06T03C08 [CP072229]
25546
25459
-
Ser
GCT
-
¡û
>W2110733275
JAJCQX010000078
Bacteroidota
Parabacteroides merdae DFI.1.110 [JAJCQX]
8204
8291
+
Ser
GCT
[ENA]
¡û
>C211389862
CP081901
Bacteroidota
Parabacteroides merdae BFG-280 [CP081901]
955267
955354
+
Ser
GCT
-
¡û
>C231217833
CP085927
Bacteroidota
Parabacteroides merdae FDAARGOS_1586 [CP085927]
3610800
3610887
+
Ser
GCT
-
¡û
>C231450714
CP102286
Bacteroidota
Parabacteroides merdae ATCC 43184 [CP102286]
1972190
1972277
+
Ser
GCT
-
¡û
>W2110797439
WQNX01000055
Bacteroidota
Parabacteroides merdae MCC685 [WQNX]
14675
14588
-
Ser
GCT
[ENA]
¡û
>W2310017358
BQNZ01000001
Bacteroidota
Parabacteroides merdae CE91-St3 [BQNZ]
1203763
1203676
-
Ser
GCT
[ENA]
¡û
>W1511328303
JQJD01000003
Bacteroidota
Porphyromonas cangingivalis COT-109 OH1386 [JQJD]
45981
45894
-
Ser
GCT
[ENA]
¡û
>W1511328419
JQJF01000021
Bacteroidota
Porphyromonas cangingivalis COT-109 OH1379 [JQJF]
58634
58547
-
Ser
GCT
[ENA]
¡û
>W1511588441
LBCF01000033
Bacteroidota
Bacteroides sp. UNK.MGS-14 [LBCF]
8202
8289
+
Ser
GCT
[ENA]
¡û
>W1610102279
CZAG01000005
Bacteroidota
Parabacteroides merdae [CZAG]
377550
377463
-
Ser
GCT
[ENA]
¡û
>W1710105034
CZAG01000005
Bacteroidota
Parabacteroides merdae [CZAG]
377550
377463
-
Ser
GCT
[ENA]
¡û
>W1710600454
FUWL01000019
Bacteroidota
Porphyromonas cangingivalis [FUWL]
17922
18009
+
Ser
GCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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