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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.780126 (217 seq.)
>W1710785707
LJIC01000027
Alphaproteobacteria
Rhodopseudomonas sp. AAP120 [LJIC]
86867
86940
+
Cys
GCA
[ENA]
¡û
>W1710802918
LJYE01000037
Alphaproteobacteria
Bradyrhizobium pachyrhizi [LJYE]
219242
219315
+
Cys
GCA
[ENA]
¡û
>W1710802981
LJYF01000031
Alphaproteobacteria
Bradyrhizobium yuanmingense [LJYF]
672291
672364
+
Cys
GCA
[ENA]
¡û
>W1710803032
LJYG01000108
Alphaproteobacteria
Bradyrhizobium manausense [LJYG]
135594
135667
+
Cys
GCA
[ENA]
¡û
>W1710854936
LLXX01000090
Alphaproteobacteria
Bradyrhizobium valentinum [LLXX]
100944
101017
+
Cys
GCA
[ENA]
¡û
>W1710854984
LLXY01000146
Alphaproteobacteria
Bradyrhizobium valentinum [LLXY]
58800
58727
-
Cys
GCA
[ENA]
¡û
>W1710855063
LLXZ01000160
Alphaproteobacteria
Bradyrhizobium jicamae [LLXZ]
28740
28667
-
Cys
GCA
[ENA]
¡û
>W1710855098
LLYA01000154
Alphaproteobacteria
Bradyrhizobium retamae [LLYA]
45386
45313
-
Cys
GCA
[ENA]
¡û
>W1710855158
LLYB01000103
Alphaproteobacteria
Bradyrhizobium lablabi [LLYB]
78966
79039
+
Cys
GCA
[ENA]
¡û
>W1710877727
LMQJ01000001
Alphaproteobacteria
Bradyrhizobium sp. Leaf396 [LMQJ]
407059
407132
+
Cys
GCA
[ENA]
¡û
>W1710891411
LNCU01000072
Alphaproteobacteria
Bradyrhizobium macuxiense BR 10303 [LNCU]
207055
207128
+
Cys
GCA
[ENA]
¡û
>W1710892765
LNEC01000011
Alphaproteobacteria
Bradyrhizobiaceae bacterium Ga0074131 [LNEC]
12483
12410
-
Cys
GCA
[ENA]
¡û
>W1711067408
LSEF01000085
Alphaproteobacteria
Bradyrhizobium neotropicale [LSEF]
41341
41414
+
Cys
GCA
[ENA]
¡û
>W1711073006
LSIC01000153
Alphaproteobacteria
Bradyrhizobium sp. CCH5-F6 [LSIC]
44283
44356
+
Cys
GCA
[ENA]
¡û
>W1711124815
LUKO01000184
Alphaproteobacteria
Bradyrhizobium liaoningense [LUKO]
81058
81131
+
Cys
GCA
[ENA]
¡û
>W131164111
ARAG01000009
Alphaproteobacteria
Bradyrhizobium elkanii USDA 76 [ARAG]
1095062
1094989
-
Cys
GCA
[ENA]
¡û
>W131164969
ARBF01000053
Alphaproteobacteria
Bradyrhizobium sp. WSM2793 WSM2793 [ARBF]
13982
14055
+
Cys
GCA
[ENA]
¡û
>W131170217
ARFJ01000003
Alphaproteobacteria
Bradyrhizobium japonicum USDA 124 [ARFJ]
194685
194758
+
Cys
GCA
[ENA]
¡û
>W1711180128
LWIG01000033
Alphaproteobacteria
Bradyrhizobium sacchari BR10280 [LWIG]
231708
231635
-
Cys
GCA
[ENA]
¡û
>W1711193140
LWUI01000011
Alphaproteobacteria
Bradyrhizobium elkanii [LWUI]
28218
28145
-
Cys
GCA
[ENA]
¡û
>W1711206743
LXEM01000022
Alphaproteobacteria
Bradyrhizobium elkanii [LXEM]
429433
429506
+
Cys
GCA
[ENA]
¡û
>W131217327
ATWP01000013
Alphaproteobacteria
Bradyrhizobium japonicum is5 [ATWP]
1074
1147
+
Cys
GCA
[ENA]
¡û
>W1711317193
MAXB01000114
Alphaproteobacteria
Bradyrhizobium paxllaeri [MAXB]
107595
107522
-
Cys
GCA
[ENA]
¡û
>W1711317215
MAXC01000014
Alphaproteobacteria
Bradyrhizobium sp. LMTR 3 [MAXC]
24704
24631
-
Cys
GCA
[ENA]
¡û
>W131227188
AUEZ01000003
Alphaproteobacteria
Bradyrhizobium sp. Ai1a-2 [AUEZ]
129823
129896
+
Cys
GCA
[ENA]
¡û
>W131227297
AUFA01000035
Alphaproteobacteria
Bradyrhizobium sp. Cp5.3 [AUFA]
2314
2241
-
Cys
GCA
[ENA]
¡û
>W131228672
AUGD01000002
Alphaproteobacteria
Bradyrhizobium japonicum in8p8 [AUGD]
205414
205341
-
Cys
GCA
[ENA]
¡û
>W1711487047
MKFI01000002
Alphaproteobacteria
Bradyrhizobium mercantei SEMIA 6399 [MKFI]
126654
126727
+
Cys
GCA
[ENA]
¡û
>W1711501123
MKRG01000016
Alphaproteobacteria
Afipia sp. 62-7 [MKRG]
110812
110739
-
Cys
GCA
[ENA]
¡û
>W1711504249
MKUJ01000010
Alphaproteobacteria
Afipia sp. 64-13 [MKUJ]
139044
139117
+
Cys
GCA
[ENA]
¡û
>W1711613031
MOXO01000308
Alphaproteobacteria
Bradyrhizobium elkanii [MOXO]
3819
3892
+
Cys
GCA
[ENA]
¡û
>W1711636736
MPVQ01000052
Alphaproteobacteria
Bradyrhizobium brasilense UFLA 03-321 [MPVQ]
28686
28759
+
Cys
GCA
[ENA]
¡û
>W1711783534
MVOD01000020
Alphaproteobacteria
Rhodopseudomonas palustris [MVOD]
447725
447798
+
Cys
GCA
[ENA]
¡û
>W1711928949
NAFL01000252
Alphaproteobacteria
Bradyrhizobium japonicum [NAFL]
56815
56888
+
Cys
GCA
[ENA]
¡û
>C171021118
CP013127
Alphaproteobacteria
Bradyrhizobium diazoefficiens USDA 122 [CP013127]
5162123
5162050
-
Cys
GCA
-
¡û
>C171064690
CP017637
Alphaproteobacteria
Bradyrhizobium japonicum J5 [CP017637]
5710546
5710473
-
Cys
GCA
-
¡û
>C015383
CP000115
Alphaproteobacteria
Nitrobacter winogradskyi Nb-255 [CP000115]
1652827
1652754
-
Cys
GCA
[Ensembl]
¡û
>C019012
BX571963
Alphaproteobacteria
Rhodopseudomonas palustris [BX571963]
2930040
2929967
-
Cys
GCA
[Ensembl]
¡û
>w013012
AAMY01000037
Alphaproteobacteria
Nitrobacter sp. Nb-311A [AAMY]
11843
11768
-
Cys
GCA
[ENA]
¡û
>W141001292
ADOU01000069
Alphaproteobacteria
Bradyrhizobium diazoefficiens SEMIA 5080 [ADOU]
81133
81206
+
Cys
GCA
[ENA]
¡û
>W141007435
AGWX01000002
Alphaproteobacteria
Afipia broomeae ATCC 49717 [AGWX]
463693
463620
-
Cys
GCA
[ENA]
¡û
>W141007528
AGWZ01000001
Alphaproteobacteria
Afipia felis ATCC 53690 [AGWZ]
859366
859439
+
Cys
GCA
[ENA]
¡û
>WENV180308598
OBJR01068727
[OBJR] soil metagenome; soil
83
156
+
Cys
GCA
[ENA]
¢þ
>WENV180315159
OBKH01028603
[OBKH] soil metagenome; rice field; elevated CO2 plus elevated temperature
488
415
-
Cys
GCA
[ENA]
¢þ
>WENV180344453
OBLL01002200
[OBLL] soil metagenome; soil
740
813
+
Cys
GCA
[ENA]
¢þ
>WENV180345049
OBLM01007042
[OBLM] soil metagenome; soil
118
45
-
Cys
GCA
[ENA]
¢þ
>W141041860
AMCQ01001501
Alphaproteobacteria
Bradyrhizobium sp. CCGE-LA001 [AMCQ]
633
706
+
Cys
GCA
[ENA]
¡û
>W141043037
AMFB01000005
Alphaproteobacteria
Bradyrhizobium sp. DFCI-1 [AMFB]
176317
176390
+
Cys
GCA
[ENA]
¡û
>w001305
AAAF01000014
Alphaproteobacteria
Rhodopseudomonas palustris [AAAF]
590114
590189
+
Cys
GCA
[ENA]
¡û
>W141063423
APHQ01000029
Alphaproteobacteria
Afipia sp. OHSU_II-uncloned [APHQ]
104059
103986
-
Cys
GCA
[ENA]
¡û
>W141063684
APJD01000026
Alphaproteobacteria
Bradyrhizobium sp. OHSU_III [APJD]
238879
238806
-
Cys
GCA
[ENA]
¡û
>W141063706
APJE01000009
Alphaproteobacteria
Afipia sp. OHSU_I-C6 [APJE]
296538
296465
-
Cys
GCA
[ENA]
¡û
>W141063740
APJF01000001
Alphaproteobacteria
Afipia sp. OHSU_I-C4 [APJF]
296538
296465
-
Cys
GCA
[ENA]
¡û
>W141063808
APJG01000015
Alphaproteobacteria
Afipia sp. OHSU_I-uncloned [APJG]
69910
69983
+
Cys
GCA
[ENA]
¡û
>W141063837
APJH01000006
Alphaproteobacteria
Afipia sp. OHSU_II-C2 [APJH]
140293
140366
+
Cys
GCA
[ENA]
¡û
>W141063876
APJI01000004
Alphaproteobacteria
Afipia sp. OHSU_II-C1 [APJI]
304572
304645
+
Cys
GCA
[ENA]
¡û
>WENV180694340
OCZS012218434
[OCZS] soil metagenome; soil
210
137
-
Cys
GCA
[ENA]
¢þ
>W141093598
AVBK01000015
Alphaproteobacteria
Afipia sp. NBIMC_P1-C1 [AVBK]
58094
58021
-
Cys
GCA
[ENA]
¡û
>W141093650
AVBL01000013
Alphaproteobacteria
Afipia sp. NBIMC_P1-C2 [AVBL]
216075
216002
-
Cys
GCA
[ENA]
¡û
>W141093681
AVBM01000003
Alphaproteobacteria
Afipia sp. NBIMC_P1-C3 [AVBM]
216075
216002
-
Cys
GCA
[ENA]
¡û
>W08007840
ABKN01000001
Alphaproteobacteria
Afipia carboxidovorans OM5 [ABKN]
2025787
2025860
+
Cys
GCA
[ENA]
¡û
>WENV181166378
OEIU01000163
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
8832
8905
+
Cys
GCA
[ENA]
¢þ
>WENV181378094
OFRA01073549
[OFRA] wastewater metagenome; Lake Maggiore Verbania
418
345
-
Cys
GCA
[ENA]
¢þ
>WENV181379302
OFRD01000370
[OFRD] wastewater metagenome; Exp Tend CN 100WW
14057
13984
-
Cys
GCA
[ENA]
¢þ
>WENV181383978
OFRH01003444
[OFRH] wastewater metagenome; Exp Tend NO 100WW
1481
1408
-
Cys
GCA
[ENA]
¢þ
>WENV181385176
OFRI01044186
[OFRI] wastewater metagenome; Exp Tend VB 90WW
110
37
-
Cys
GCA
[ENA]
¢þ
>WENV181385933
OFRL01000152
[OFRL] wastewater metagenome; Lake Maggiore Cannobio
30629
30556
-
Cys
GCA
[ENA]
¢þ
>WENV181399848
OFSF01000066
[OFSF] wastewater metagenome; Exp Tend VB 100WW
7711
7784
+
Cys
GCA
[ENA]
¢þ
>W141150019
AXAB01000002
Alphaproteobacteria
Bradyrhizobium sp. WSM2254 [AXAB]
287200
287273
+
Cys
GCA
[ENA]
¡û
>W141150110
AXAD01000001
Alphaproteobacteria
Bradyrhizobium arachidis USDA 3384 [AXAD]
1096987
1097060
+
Cys
GCA
[ENA]
¡û
>W141150209
AXAF01000001
Alphaproteobacteria
Bradyrhizobium ottawaense USDA 4 [AXAF]
271553
271480
-
Cys
GCA
[ENA]
¡û
>W141150271
AXAG01000011
Alphaproteobacteria
Bradyrhizobium japonicum USDA 38 [AXAG]
146989
147062
+
Cys
GCA
[ENA]
¡û
>W141150304
AXAH01000002
Alphaproteobacteria
Bradyrhizobium elkanii USDA 3254 [AXAH]
351945
351872
-
Cys
GCA
[ENA]
¡û
>W141150730
AXAP01000031
Alphaproteobacteria
Bradyrhizobium elkanii WSM2783 [AXAP]
12092
12019
-
Cys
GCA
[ENA]
¡û
>W141151030
AXAT01000002
Alphaproteobacteria
Bradyrhizobium japonicum USDA 135 [AXAT]
16389
16316
-
Cys
GCA
[ENA]
¡û
>W141151082
AXAU01000001
Alphaproteobacteria
Bradyrhizobium murdochi WSM1741 [AXAU]
798198
798125
-
Cys
GCA
[ENA]
¡û
>W141151121
AXAV01000001
Alphaproteobacteria
Bradyrhizobium japonicum USDA 6 [AXAV]
531549
531476
-
Cys
GCA
[ENA]
¡û
>W141151169
AXAW01000002
Alphaproteobacteria
Bradyrhizobium elkanii USDA 3259 [AXAW]
62297
62370
+
Cys
GCA
[ENA]
¡û
>W141151243
AXAX01000011
Alphaproteobacteria
Bradyrhizobium diazoefficiens USDA 122 [AXAX]
200534
200461
-
Cys
GCA
[ENA]
¡û
>W141151295
AXAY01000020
Alphaproteobacteria
Bradyrhizobium sp. WSM3983 [AXAY]
1549
1476
-
Cys
GCA
[ENA]
¡û
>W141151335
AXAZ01000034
Alphaproteobacteria
Bradyrhizobium sp. WSM1743 [AXAZ]
80064
80137
+
Cys
GCA
[ENA]
¡û
>W141151472
AXBC01000003
Alphaproteobacteria
Bradyrhizobium genosp. SA-4 SA-4 str. CB756 [AXBC]
1976591
1976518
-
Cys
GCA
[ENA]
¡û
>W141168840
AXVG01000012
Alphaproteobacteria
Bradyrhizobium japonicum 22 [AXVG]
243805
243732
-
Cys
GCA
[ENA]
¡û
>W141169181
AXVP01000007
Alphaproteobacteria
Bradyrhizobium japonicum USDA 123 [AXVP]
107414
107341
-
Cys
GCA
[ENA]
¡û
>W141233889
BAWE01000004
Alphaproteobacteria
Bradyrhizobium sp. DOA9 [BAWE]
2845321
2845394
+
Cys
GCA
[ENA]
¡û
>W141261722
CCAZ010000122
Alphaproteobacteria
Afipia felis [CCAZ]
18791
18864
+
Cys
GCA
[ENA]
¡û
>W141278100
JAFC01000010
Alphaproteobacteria
Bradyrhizobium elkanii USDA 94 [JAFC]
173749
173822
+
Cys
GCA
[ENA]
¡û
>WENV183677146
ORJL011715388
[ORJL] groundwater metagenome; groundwater
5139
5066
-
Cys
GCA
[ENA]
¢þ
>WENV183724212
PJQE01001616
[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
553
626
+
Cys
GCA
[ENA]
¢þ
>WENV170577026
FRDC01002814
[FRDC] freshwater metagenome; water
199770
199697
-
Cys
GCA
[ENA]
¢þ
>WENV170595885
FUFK012013008
[FUFK] metagenome; unknown
108
181
+
Cys
GCA
[ENA]
¢þ
>WENV170613166
FUWD012784367
[FUWD] metagenome; unknown
279
352
+
Cys
GCA
[ENA]
¢þ
>WENV170653224
JRYI01023250
[JRYI] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 1 ppm DO
1222
1149
-
Cys
GCA
[ENA]
¢þ
>WENV170705848
LNAP01000483
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
17700
17627
-
Cys
GCA
[ENA]
¢þ
>WENV170709063
LNFM01000087
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
9700
9627
-
Cys
GCA
[ENA]
¢þ
>WENV170709772
LNFM01000682
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
12478
12405
-
Cys
GCA
[ENA]
¢þ
>WENV170711420
LNFM01005174
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
16439
16366
-
Cys
GCA
[ENA]
¢þ
>WENV170961891
MLJW01005144
[MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for
783
856
+
Cys
GCA
[ENA]
¢þ
>C181041854
CP019966
Alphaproteobacteria
Rhodopseudomonas palustris PS3 [CP019966]
2891608
2891681
+
Cys
GCA
-
¡û
>C181041925
CP019967
Alphaproteobacteria
Rhodopseudomonas palustris YSC3 [CP019967]
2876127
2876054
-
Cys
GCA
-
¡û
>C181113197
CP025113
Alphaproteobacteria
Bradyrhizobium sp. SK17 [CP025113]
5475953
5475880
-
Cys
GCA
-
¡û
>C181178160
CP029425
Alphaproteobacteria
Bradyrhizobium ottawaense OO99 [CP029425]
6583025
6582952
-
Cys
GCA
-
¡û
>C181203871
LS398110
Alphaproteobacteria
Bradyrhizobium vignae [LS398110]
4196056
4195983
-
Cys
GCA
-
¡û
>C191019684
CP022219
Alphaproteobacteria
Bradyrhizobium guangxiense CCBAU 53363 [CP022219]
3130093
3130166
+
Cys
GCA
-
¡û
>C191019753
CP022221
Alphaproteobacteria
Bradyrhizobium zhanjiangense CCBAU 51778 [CP022221]
5244619
5244546
-
Cys
GCA
-
¡û
>C191071668
CP030051
Alphaproteobacteria
Bradyrhizobium guangdongense CCBAU 51649 [CP030051]
3958107
3958180
+
Cys
GCA
-
¡û
>W09107582
ABJR01000001
Alphaproteobacteria
Rhodopseudomonas palustris TIE-1 [ABJR]
1088564
1088491
-
Cys
GCA
[ENA]
¡û
>W141730469
JNIJ01000012
Alphaproteobacteria
Bradyrhizobium sp. URHD0069 [JNIJ]
21575
21502
-
Cys
GCA
[ENA]
¡û
>W1910182851
BJNF01000057
Alphaproteobacteria
Nitrobacter winogradskyi NBRC 14297 [BJNF]
15506
15433
-
Cys
GCA
[ENA]
¡û
>W1910183059
BJNK01000001
Alphaproteobacteria
Bradyrhizobium japonicum NBRC 14783 [BJNK]
203258
203185
-
Cys
GCA
[ENA]
¡û
>W1910183108
BJNL01000010
Alphaproteobacteria
Bradyrhizobium elkanii NBRC 14791 [BJNL]
146596
146669
+
Cys
GCA
[ENA]
¡û
>C09108139
CP001196
Alphaproteobacteria
Afipia carboxidovorans OM5 OM5; ATCC 49405 [CP001196]
2025473
2025546
+
Cys
GCA
-
¡û
>W1910598262
LAXE01000001
Alphaproteobacteria
Bradyrhizobium sp. SUTN9-2 [LAXE]
4679535
4679462
-
Cys
GCA
[ENA]
¡û
>W1910598984
LBJM01000020
Alphaproteobacteria
Bradyrhizobium zhanjiangense CCBAU 51787 [LBJM]
110337
110264
-
Cys
GCA
[ENA]
¡û
>W1910693453
MDEP01000041
Alphaproteobacteria
Bradyrhizobium sp. UASWS1016 [MDEP]
1024
1097
+
Cys
GCA
[ENA]
¡û
>W1911219163
NRSI01000014
Alphaproteobacteria
Rhodopseudomonas palustris DSM 126 [NRSI]
159066
158993
-
Cys
GCA
[ENA]
¡û
>W1911245285
NSJY01000015
Alphaproteobacteria
Bradyrhizobium sp. UFLA03-84 [NSJY]
59179
59106
-
Cys
GCA
[ENA]
¡û
>W1911409833
NWTF01000008
Alphaproteobacteria
Bradyrhizobium ottawaense L2 [NWTF]
122150
122223
+
Cys
GCA
[ENA]
¡û
>W1911409871
NWTG01000004
Alphaproteobacteria
Bradyrhizobium sp. C9 [NWTG]
45547
45620
+
Cys
GCA
[ENA]
¡û
>W1911410018
NWTI01000017
Alphaproteobacteria
Bradyrhizobium sp. Y36 [NWTI]
39007
38934
-
Cys
GCA
[ENA]
¡û
>W1911629497
PSRR01000062
Alphaproteobacteria
Bradyrhizobium sp. Leo170 [PSRR]
7846
7919
+
Cys
GCA
[ENA]
¡û
>W1911629534
PSRS01000005
Alphaproteobacteria
Bradyrhizobium sp. Leo121 [PSRS]
96016
96089
+
Cys
GCA
[ENA]
¡û
>W1911629594
PSRT01000036
Alphaproteobacteria
Bradyrhizobium genosp. SA-3 SA-3 Rp7b [PSRT]
27316
27389
+
Cys
GCA
[ENA]
¡û
>W1911760566
QWVU01000028
Alphaproteobacteria
Rhodopseudomonas palustris R1 [QWVU]
92454
92527
+
Cys
GCA
[ENA]
¡û
>W1911809193
QYYC01000050
Alphaproteobacteria
Rhodopseudomonas palustris 2.1.37 [QYYC]
714484
714411
-
Cys
GCA
[ENA]
¡û
>W1911809233
QYYD01000022
Alphaproteobacteria
Rhodopseudomonas palustris 2.1.18 [QYYD]
90592
90519
-
Cys
GCA
[ENA]
¡û
>W1911817861
QZMV01000004
Alphaproteobacteria
Bradyrhizobium sp. LVM 105 [QZMV]
491932
491859
-
Cys
GCA
[ENA]
¡û
>W1810089620
PGEV01000001
Alphaproteobacteria
Afipia broomeae GAS525 [PGEV]
1749382
1749455
+
Cys
GCA
[ENA]
¡û
>W1810104399
PGVG01000002
Alphaproteobacteria
Bradyrhizobium forestalis INPA54B [PGVG]
77442
77515
+
Cys
GCA
[ENA]
¡û
>W1810289869
PTFE01000041
Alphaproteobacteria
Bradyrhizobium sp. AC87j1 [PTFE]
35985
36058
+
Cys
GCA
[ENA]
¡û
>W1810367854
PVYZ01000001
Alphaproteobacteria
Rhizobium tropici NFR14 [PVYZ]
190596
190523
-
Cys
GCA
[ENA]
¡û
>W1810395530
PYCM01000186
Alphaproteobacteria
Bradyrhizobium algeriense RST89 [PYCM]
4464
4537
+
Cys
GCA
[ENA]
¡û
>W1810395620
PYCN01000015
Alphaproteobacteria
Bradyrhizobium algeriense RST91 [PYCN]
63894
63821
-
Cys
GCA
[ENA]
¡û
>W1810400113
PYFV01000014
Alphaproteobacteria
Bradyrhizobium sp. MOS004 [PYFV]
19382
19309
-
Cys
GCA
[ENA]
¡û
>W1810679415
QKQS01000003
Alphaproteobacteria
Rhodopseudomonas palustris XCP [QKQS]
48245
48318
+
Cys
GCA
[ENA]
¡û
>W1810787522
QRDT01000026
Alphaproteobacteria
Rhodopseudomonas pentothenatexigens JA575 [QRDT]
14533
14460
-
Cys
GCA
[ENA]
¡û
>W1810884419
QUMP01000026
Alphaproteobacteria
Rhodopseudomonas thermotolerans JA576,NBRC 108863,KCTC 15144 [QUMP]
14533
14460
-
Cys
GCA
[ENA]
¡û
>C151066555
CP010313
Alphaproteobacteria
Bradyrhizobium japonicum E109 [CP010313]
5439013
5438940
-
Cys
GCA
[Ensembl]
¡û
>W10112829
ADFI01000016
Alphaproteobacteria
Rhodopseudomonas palustris DX-1 [ADFI]
51042
50969
-
Cys
GCA
[ENA]
¡û
>W10119569
ADVZ01000002
Alphaproteobacteria
Afipia sp. 1NLS2 [ADVZ]
461697
461624
-
Cys
GCA
[ENA]
¡û
>C10110774
CP001096
Alphaproteobacteria
Rhodopseudomonas palustris TIE-1 [CP001096]
3104034
3103961
-
Cys
GCA
[Ensembl]
¡û
>C11116289
CP002821
Alphaproteobacteria
Afipia carboxidovorans OM4 [CP002821]
2100173
2100100
-
Cys
GCA
[Ensembl]
¡û
>W1510973718
JGCL01000004
Alphaproteobacteria
Bradyrhizobium japonicum FN1 [JGCL]
186371
186298
-
Cys
GCA
[ENA]
¡û
>W11116056
ADFI01000016
Alphaproteobacteria
Rhodopseudomonas palustris DX-1 [ADFI]
51042
50969
-
Cys
GCA
[ENA]
¡û
>C11118755
CP002418
Alphaproteobacteria
Rhodopseudomonas palustris [CP002418]
3089090
3089163
+
Cys
GCA
[Ensembl]
¡û
>W1511353634
JRPN01000021
Alphaproteobacteria
Bradyrhizobium japonicum Is-34 [JRPN]
178632
178559
-
Cys
GCA
[ENA]
¡û
>W11125835
ADVZ01000002
Alphaproteobacteria
Afipia sp. 1NLS2 [ADVZ]
461697
461624
-
Cys
GCA
[ENA]
¡û
>W1511507973
JXOF01000177
Alphaproteobacteria
Bradyrhizobium elkanii UASWS1015 [JXOF]
2466
2539
+
Cys
GCA
[ENA]
¡û
>W1511625934
LCZM01000081
Alphaproteobacteria
Rhodopseudomonas palustris 42OL [LCZM]
1254
1181
-
Cys
GCA
[ENA]
¡û
>W1511681429
LFIP01000102
Alphaproteobacteria
Bradyrhizobium embrapense SEMIA 6208 [LFIP]
73707
73634
-
Cys
GCA
[ENA]
¡û
>W1511681477
LFIQ01000087
Alphaproteobacteria
Bradyrhizobium pachyrhizi PAC 48 [LFIQ]
6357
6430
+
Cys
GCA
[ENA]
¡û
>W1511684013
LFLZ01000004
Alphaproteobacteria
Bradyrhizobium tropiciagri SEMIA 6148 [LFLZ]
105243
105316
+
Cys
GCA
[ENA]
¡û
>W1511705984
LGTB01000004
Alphaproteobacteria
Bradyrhizobium viridifuturi SEMIA 690 [LGTB]
212675
212748
+
Cys
GCA
[ENA]
¡û
>W1511706686
LGUJ01000008
Alphaproteobacteria
Bradyrhizobium diazoefficiens Is-1 [LGUJ]
81145
81218
+
Cys
GCA
[ENA]
¡û
>C121000485
AP012206
Alphaproteobacteria
Bradyrhizobium japonicum USDA 6 [AP012206]
5408715
5408642
-
Cys
GCA
[Ensembl]
¡û
>C121000742
AP012279
Alphaproteobacteria
Bradyrhizobium cosmicum S23321 [AP012279]
3831481
3831408
-
Cys
GCA
[Ensembl]
¡û
>C121003009
CP002826
Alphaproteobacteria
Afipia carboxidovorans OM5 [CP002826]
2099047
2098974
-
Cys
GCA
-
¡û
>C161001043
AP014685
Alphaproteobacteria
Bradyrhizobium diazoefficiens NK6 [AP014685]
9001044
9000971
-
Cys
GCA
-
¡û
>C161062527
CP013949
Alphaproteobacteria
Bradyrhizobium sp. CCGE-LA001 [CP013949]
4076908
4076981
+
Cys
GCA
[Ensembl]
¡û
>C161097214
CP016428
Alphaproteobacteria
Bradyrhizobium icense LMTR 13 [CP016428]
4380025
4379952
-
Cys
GCA
[Ensembl]
¡û
>C161107945
LN907826
Alphaproteobacteria
Bradyrhizobium sp. [LN907826]
5327810
5327737
-
Cys
GCA
-
¡û
>W121062443
AJJK01000637
Alphaproteobacteria
Bradyrhizobium elkanii 587 [AJJK]
5522
5449
-
Cys
GCA
[ENA]
¡û
>W121065220
AJPV01000379
Alphaproteobacteria
Bradyrhizobium elkanii CCBAU 05737 [AJPV]
30084
30157
+
Cys
GCA
[ENA]
¡û
>W121065270
AJPW01000534
Alphaproteobacteria
Bradyrhizobium elkanii CCBAU 43297 [AJPW]
3115
3042
-
Cys
GCA
[ENA]
¡û
>W121065311
AJPX01000593
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 15354 [AJPX]
16194
16267
+
Cys
GCA
[ENA]
¡û
>W121065328
AJPY01000087
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 15517 [AJPY]
2145
2072
-
Cys
GCA
[ENA]
¡û
>W121065389
AJPZ01000265
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 15618 [AJPZ]
346
419
+
Cys
GCA
[ENA]
¡û
>W121065449
AJQA01000312
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 25435 [AJQA]
31456
31383
-
Cys
GCA
[ENA]
¡û
>W121065489
AJQB01000391
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 83623 [AJQB]
19470
19543
+
Cys
GCA
[ENA]
¡û
>W121065540
AJQC01000428
Alphaproteobacteria
Bradyrhizobium liaoningense CCBAU 05525 [AJQC]
9527
9454
-
Cys
GCA
[ENA]
¡û
>W121065570
AJQD01000059
Alphaproteobacteria
Bradyrhizobium liaoningense CCBAU 83689 [AJQD]
13336
13409
+
Cys
GCA
[ENA]
¡û
>W121065658
AJQF01000044
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 15544 [AJQF]
34432
34505
+
Cys
GCA
[ENA]
¡û
>W121065702
AJQG01000002
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 15615 [AJQG]
51377
51304
-
Cys
GCA
[ENA]
¡û
>W121065752
AJQH01000012
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 15635 [AJQH]
385
458
+
Cys
GCA
[ENA]
¡û
>W121065863
AJQJ01000190
Alphaproteobacteria
Bradyrhizobium yuanmingense CCBAU 05623 [AJQJ]
873
946
+
Cys
GCA
[ENA]
¡û
>W121065926
AJQK01000246
Alphaproteobacteria
Bradyrhizobium yuanmingense CCBAU 25021 [AJQK]
66818
66891
+
Cys
GCA
[ENA]
¡û
>W121065945
AJQL01000063
Alphaproteobacteria
Bradyrhizobium yuanmingense CCBAU 35157 [AJQL]
98
25
-
Cys
GCA
[ENA]
¡û
>W121085060
AKIY01000052
Alphaproteobacteria
Bradyrhizobium sp. YR681 [AKIY]
8841
8768
-
Cys
GCA
[ENA]
¡û
>W1610049418
BBEX01001514
Alphaproteobacteria
Bradyrhizobium sp. 17-4 [BBEX]
779
706
-
Cys
GCA
[ENA]
¡û
>W1610514424
FMAE01000005
Alphaproteobacteria
Bradyrhizobium yuanmingense [FMAE]
75491
75564
+
Cys
GCA
[ENA]
¡û
>W1610514601
FMAI01000006
Alphaproteobacteria
Bradyrhizobium shewense err11 [FMAI]
86891
86818
-
Cys
GCA
[ENA]
¡û
>W1610549132
JXDL01000001
Alphaproteobacteria
Bradyrhizobium sp. AT1 [JXDL]
687131
687204
+
Cys
GCA
[ENA]
¡û
>W1610550318
JXJM01000001
Alphaproteobacteria
Bradyrhizobium sp. DOA1 [JXJM]
3220694
3220621
-
Cys
GCA
[ENA]
¡û
>W1610649513
LJIC01000027
Alphaproteobacteria
Rhodopseudomonas sp. AAP120 [LJIC]
86867
86940
+
Cys
GCA
[ENA]
¡û
>W1610666775
LJYE01000037
Alphaproteobacteria
Bradyrhizobium pachyrhizi [LJYE]
219242
219315
+
Cys
GCA
[ENA]
¡û
>W1610666838
LJYF01000031
Alphaproteobacteria
Bradyrhizobium yuanmingense [LJYF]
672291
672364
+
Cys
GCA
[ENA]
¡û
>W1610666889
LJYG01000108
Alphaproteobacteria
Bradyrhizobium manausense [LJYG]
135594
135667
+
Cys
GCA
[ENA]
¡û
>W1610717277
LLXX01000090
Alphaproteobacteria
Bradyrhizobium valentinum [LLXX]
100944
101017
+
Cys
GCA
[ENA]
¡û
>W1610717325
LLXY01000146
Alphaproteobacteria
Bradyrhizobium valentinum [LLXY]
58800
58727
-
Cys
GCA
[ENA]
¡û
>W1610717404
LLXZ01000160
Alphaproteobacteria
Bradyrhizobium jicamae [LLXZ]
28740
28667
-
Cys
GCA
[ENA]
¡û
>W1610717439
LLYA01000154
Alphaproteobacteria
Bradyrhizobium retamae [LLYA]
45386
45313
-
Cys
GCA
[ENA]
¡û
>W1610717499
LLYB01000103
Alphaproteobacteria
Bradyrhizobium lablabi [LLYB]
78966
79039
+
Cys
GCA
[ENA]
¡û
>W1610740073
LMQJ01000001
Alphaproteobacteria
Bradyrhizobium sp. Leaf396 [LMQJ]
407059
407132
+
Cys
GCA
[ENA]
¡û
>W1610751776
LNCU01000072
Alphaproteobacteria
Bradyrhizobium macuxiense BR 10303 [LNCU]
207055
207128
+
Cys
GCA
[ENA]
¡û
>W1610753031
LNEC01000011
Alphaproteobacteria
Bradyrhizobiaceae bacterium Ga0074131 [LNEC]
12483
12410
-
Cys
GCA
[ENA]
¡û
>W1610907978
LSEF01000085
Alphaproteobacteria
Bradyrhizobium neotropicale [LSEF]
41341
41414
+
Cys
GCA
[ENA]
¡û
>W1610912266
LSIC01000153
Alphaproteobacteria
Bradyrhizobium sp. CCH5-F6 [LSIC]
44283
44356
+
Cys
GCA
[ENA]
¡û
>W1610935787
LUKO01000184
Alphaproteobacteria
Bradyrhizobium liaoningense [LUKO]
81058
81131
+
Cys
GCA
[ENA]
¡û
>W1611061263
MAXB01000114
Alphaproteobacteria
Bradyrhizobium paxllaeri [MAXB]
107595
107522
-
Cys
GCA
[ENA]
¡û
>W1611061285
MAXC01000014
Alphaproteobacteria
Bradyrhizobium sp. LMTR 3 [MAXC]
24704
24631
-
Cys
GCA
[ENA]
¡û
>W1710045817
BBEX01001514
Alphaproteobacteria
Bradyrhizobium sp. 17-4 [BBEX]
779
706
-
Cys
GCA
[ENA]
¡û
>W1710500114
FMAE01000005
Alphaproteobacteria
Bradyrhizobium yuanmingense [FMAE]
75491
75564
+
Cys
GCA
[ENA]
¡û
>W1710500291
FMAI01000006
Alphaproteobacteria
Bradyrhizobium shewense err11 [FMAI]
86891
86818
-
Cys
GCA
[ENA]
¡û
>W1710513054
FMZW01000017
Alphaproteobacteria
Bradyrhizobium brasilense R5 [FMZW]
140079
140152
+
Cys
GCA
[ENA]
¡û
>W1710516779
FNCU01000042
Alphaproteobacteria
Bradyrhizobium sp. Rc2d [FNCU]
16458
16385
-
Cys
GCA
[ENA]
¡û
>W1710536606
FNTH01000001
Alphaproteobacteria
Bradyrhizobium erythrophlei [FNTH]
904573
904500
-
Cys
GCA
[ENA]
¡û
>W1710564255
FOQJ01000001
Alphaproteobacteria
Bradyrhizobium sp. cf659 [FOQJ]
639145
639072
-
Cys
GCA
[ENA]
¡û
>W1710564437
FOQM01000021
Alphaproteobacteria
Bradyrhizobium sp. Gha [FOQM]
79697
79624
-
Cys
GCA
[ENA]
¡û
>W1710569811
FOUS01000008
Alphaproteobacteria
Bradyrhizobium sp. Rc3b [FOUS]
286290
286217
-
Cys
GCA
[ENA]
¡û
>W1710571313
FOVU01000011
Alphaproteobacteria
Bradyrhizobium sp. Ghvi [FOVU]
33263
33336
+
Cys
GCA
[ENA]
¡û
>W1710578525
FPBQ01000017
Alphaproteobacteria
Bradyrhizobium arachidis [FPBQ]
47640
47713
+
Cys
GCA
[ENA]
¡û
>W1710594261
FSRD01000001
Alphaproteobacteria
Bradyrhizobium erythrophlei [FSRD]
7813876
7813803
-
Cys
GCA
[ENA]
¡û
>W1710652706
JXDL01000001
Alphaproteobacteria
Bradyrhizobium sp. AT1 [JXDL]
687131
687204
+
Cys
GCA
[ENA]
¡û
>W1710659044
JXJM01000001
Alphaproteobacteria
Bradyrhizobium sp. DOA1 [JXJM]
3220694
3220621
-
Cys
GCA
[ENA]
¡û
>W1710735574
LGHK01000031
Alphaproteobacteria
Bradyrhizobium sp. NAS96.2 [LGHK]
28540
28613
+
Cys
GCA
[ENA]
¡û
>W1710735669
LGHL01000349
Alphaproteobacteria
Bradyrhizobium sp. NAS80.1 [LGHL]
985
1058
+
Cys
GCA
[ENA]
¡û
>W1710735700
LGHM01000144
Alphaproteobacteria
Bradyrhizobium sp. AS23.2 [LGHM]
18109
18036
-
Cys
GCA
[ENA]
¡û
Select
Sequence ID
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(Sample source for ENV)
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