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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.95600 (119 seq.)
>W1710872047
LMLR01000013
Actinomycetota
Arthrobacter sp. Leaf69 [LMLR]
227747
227829
+
Leu
CAA
[ENA]
¡û
>W1710875386
LMOI01000023
Actinomycetota
Arthrobacter sp. Leaf137 [LMOI]
116556
116474
-
Leu
CAA
[ENA]
¡û
>W1710875528
LMOL01000017
Actinomycetota
Arthrobacter sp. Leaf141 [LMOL]
518
436
-
Leu
CAA
[ENA]
¡û
>W1710875635
LMON01000028
Actinomycetota
Arthrobacter sp. Leaf145 [LMON]
64202
64120
-
Leu
CAA
[ENA]
¡û
>W1710876291
LMPC01000012
Actinomycetota
Arthrobacter sp. Leaf337 [LMPC]
815578
815660
+
Leu
CAA
[ENA]
¡û
>W1710880022
LMSB01000007
Actinomycetota
Arthrobacter sp. Soil736 [LMSB]
92817
92735
-
Leu
CAA
[ENA]
¡û
>W1710880284
LMSF01000031
Actinomycetota
Arthrobacter sp. Soil761 [LMSF]
74372
74454
+
Leu
CAA
[ENA]
¡û
>W1710880318
LMSG01000017
Actinomycetota
Arthrobacter sp. Soil762 [LMSG]
145115
145197
+
Leu
CAA
[ENA]
¡û
>W1710880382
LMSH01000003
Actinomycetota
Arthrobacter sp. Soil763 [LMSH]
643117
643033
-
Leu
CAA
[ENA]
¡û
>W1710880404
LMSI01000019
Actinomycetota
Arthrobacter sp. Soil764 [LMSI]
111435
111517
+
Leu
CAA
[ENA]
¡û
>W1710909430
LNQM01000002
Actinomycetota
Pseudarthrobacter enclensis [LNQM]
204558
204642
+
Leu
CAA
[ENA]
¡û
>W1710916097
LNUT01000004
Actinomycetota
Arthrobacter sp. EPSL27 [LNUT]
1332733
1332815
+
Leu
CAA
[ENA]
¡û
>W1710995729
LQAP01000003
Actinomycetota
Arthrobacter sp. B6 [LQAP]
381709
381627
-
Leu
CAA
[ENA]
¡û
>W131066795
ANPE02000058
Actinomycetota
Arthrobacter crystallopoietes BAB-32 [ANPE]
13688
13772
+
Leu
CAA
[ENA]
¡û
>W1711124406
LUKB01000056
Actinomycetota
Arthrobacter sp. D2 [LUKB]
234
152
-
Leu
CAA
[ENA]
¡û
>W1711124449
LUKC01000055
Actinomycetota
Arthrobacter sp. D4 [LUKC]
234
152
-
Leu
CAA
[ENA]
¡û
>W1711184061
LWLP01000001
Actinomycetota
Arthrobacter sp. OY3WO11 [LWLP]
2073021
2073103
+
Leu
CAA
[ENA]
¡û
>W1711466044
MJLT01000016
Actinomycetota
Arthrobacter sp. SW1 [MJLT]
6668
6586
-
Leu
CAA
[ENA]
¡û
>W1711719322
MTIC01000006
Actinomycetota
Sinomonas mesophila [MTIC]
182802
182718
-
Leu
CAA
[ENA]
¡û
>W1711724058
MTPV01000009
Actinomycetota
Arthrobacter sp. SRS-W-1-2016 [MTPV]
26293
26211
-
Leu
CAA
[ENA]
¡û
>W1711768837
MVDG01000072
Actinomycetota
Arthrobacter sp. KBS0703 [MVDG]
51691
51773
+
Leu
CAA
[ENA]
¡û
>W1711853225
MYFE01000219
Actinomycetota
Arthrobacter globiformis [MYFE]
2140
2058
-
Leu
CAA
[ENA]
¡û
>C171062262
CP017421
Actinomycetota
Arthrobacter sp. ZXY-2 [CP017421]
2225963
2225881
-
Leu
CAA
-
¡û
>C171092025
CP019304
Actinomycetota
Arthrobacter sp. QXT-31 [CP019304]
288556
288474
-
Leu
CAA
-
¡û
>W131089945
AOFD01000030
Actinomycetota
Arthrobacter nitrophenolicus SJCon [AOFD]
24801
24883
+
Leu
CAA
[ENA]
¡û
>W131161282
AQXM01000060
Actinomycetota
Acaricomes phytoseiuli DSM 14247 [AQXM]
54715
54799
+
Leu
CAA
[ENA]
¡û
>W131172053
ARGQ01000036
Actinomycetota
Arthrobacter sp. 135MFCol5.1 [ARGQ]
114170
114252
+
Leu
CAA
[ENA]
¡û
>W131172167
ARGS01000042
Actinomycetota
Arthrobacter sp. 162MFSha1.1 [ARGS]
72786
72868
+
Leu
CAA
[ENA]
¡û
>W131172229
ARGT01000028
Actinomycetota
Arthrobacter sp. 131MFCol6.1 [ARGT]
237819
237901
+
Leu
CAA
[ENA]
¡û
>W131172261
ARGU01000038
Actinomycetota
Arthrobacter sp. 161MFSha2.1 [ARGU]
96670
96588
-
Leu
CAA
[ENA]
¡û
>W131237742
AUPJ01000534
Actinomycetota
Arthrobacter sp. TB 26 [AUPJ]
818
900
+
Leu
CAA
[ENA]
¡û
>C000999
CP000454
Actinomycetota
Arthrobacter sp. FB24 [CP000454]
1892239
1892320
+
Leu
CAA
[Ensembl]
¡û
>WENV180016375
FSUT01000156
[FSUT] metagenome; soil
1628
1710
+
Leu
CAA
[ENA]
¢þ
>WENV180019667
FTCF01000479
[FTCF] metagenome; soil
2749
2831
+
Leu
CAA
[ENA]
¢þ
>W141066002
AQRI01000014
Actinomycetota
Arthrobacter sp. MA-N2 [AQRI]
207841
207923
+
Leu
CAA
[ENA]
¡û
>W141106083
AVPD01000015
Actinomycetota
Arthrobacter sp. AK-YN10 [AVPD]
11838
11756
-
Leu
CAA
[ENA]
¡û
>WENV181192276
OEPS010532756
[OEPS] soil metagenome; soil
233
151
-
Leu
CAA
[ENA]
¢þ
>W141213550
AZSB01000532
Actinomycetota
Arthrobacter sp. I3 [AZSB]
5099
5017
-
Leu
CAA
[ENA]
¡û
>W141246975
CAQI01000044
Actinomycetota
Pseudarthrobacter siccitolerans [CAQI]
286284
286202
-
Leu
CAA
[ENA]
¡û
>WENV183674538
ORJL011400305
[ORJL] groundwater metagenome; groundwater
276
194
-
Leu
CAA
[ENA]
¢þ
>C181000309
AP014718
Actinomycetota
Arthrobacter sp. Hiyo4 [AP014718]
1568182
1568264
+
Leu
CAA
-
¡û
>C181064964
CP022436
Actinomycetota
Arthrobacter sp. YN [CP022436]
2133627
2133709
+
Leu
CAA
-
¡û
>C181134213
CP026514
Actinomycetota
Arthrobacter sp. PGP41 [CP026514]
1789439
1789521
+
Leu
CAA
-
¡û
>C191164643
CP039290
Actinomycetota
Arthrobacter sp. PAMC25564 [CP039290]
3201766
3201684
-
Leu
CAA
-
¡û
>C191165934
CP039424
Actinomycetota
Citricoccus sp. SGAir0253 [CP039424]
1825892
1825810
-
Leu
CAA
-
¡û
>C191165981
CP039429
Actinomycetota
Citricoccus sp. SGAir0453 [CP039429]
1825894
1825812
-
Leu
CAA
-
¡û
>C191174051
CP040018
Actinomycetota
Arthrobacter sp. 24S4-2 [CP040018]
2067370
2067452
+
Leu
CAA
-
¡û
>C191188243
CP041187
Actinomycetota
Pseudarthrobacter sp. NIBRBAC000502771 [CP041187]
3646291
3646209
-
Leu
CAA
-
¡û
>C191188277
CP041188
Actinomycetota
Pseudarthrobacter sp. NIBRBAC000502772 [CP041188]
2354787
2354869
+
Leu
CAA
-
¡û
>C191188520
CP041198
Actinomycetota
Pseudarthrobacter sp. NIBRBAC000502770 [CP041198]
1220882
1220964
+
Leu
CAA
-
¡û
>W141565189
JIBJ01000003
Actinomycetota
Arthrobacter sp. 9MFCol3.1 [JIBJ]
457945
457863
-
Leu
CAA
[ENA]
¡û
>W09102065
AAHG01000012
Actinomycetota
Arthrobacter sp. FB24 [AAHG]
59762
59680
-
Leu
CAA
[ENA]
¡û
>W141702016
JMLE01000009
Actinomycetota
Arthrobacter sp. UNC362MFTsu5.1 [JMLE]
76409
76327
-
Leu
CAA
[ENA]
¡û
>W1910182059
BJMO01000002
Actinomycetota
Sinomonas atrocyanea NBRC 12956 [BJMO]
34250
34333
+
Leu
CAA
[ENA]
¡û
>C09100263
CP001341
Actinomycetota
Pseudarthrobacter chlorophenolicus A6 [CP001341]
1901069
1901151
+
Leu
CAA
[Ensembl]
¡û
>W1911798244
QYLP01000031
Actinomycetota
Arthrobacter celericrescens NEAU-SA2 [QYLP]
88680
88598
-
Leu
CAA
[ENA]
¡û
>W1810167256
PJII01000008
Actinomycetota
Arthrobacter sp. ZGTC412 [PJII]
107264
107346
+
Leu
CAA
[ENA]
¡û
>W1810167354
PJIK01000011
Actinomycetota
Arthrobacter sp. ZGTC131 [PJIK]
50430
50348
-
Leu
CAA
[ENA]
¡û
>W1810167413
PJIL01000012
Actinomycetota
Arthrobacter sp. Y81 [PJIL]
59859
59777
-
Leu
CAA
[ENA]
¡û
>W1810167890
PJIV01000010
Actinomycetota
Arthrobacter sp. 9E14 [PJIV]
107578
107660
+
Leu
CAA
[ENA]
¡û
>W1810167931
PJIW01000009
Actinomycetota
Arthrobacter sp. 4R501 [PJIW]
103995
104077
+
Leu
CAA
[ENA]
¡û
>W1810171978
PJMB01000007
Actinomycetota
Arthrobacter sp. AFG7.2 [PJMB]
18519
18437
-
Leu
CAA
[ENA]
¡û
>W1810172021
PJMC01000010
Actinomycetota
Arthrobacter sp. AFG20 [PJMC]
131376
131458
+
Leu
CAA
[ENA]
¡û
>W1810296163
PTJB01000008
Actinomycetota
Arthrobacter sp. B3 [PTJB]
47966
47884
-
Leu
CAA
[ENA]
¡û
>W1810368323
PVZO01000002
Actinomycetota
Arthrobacter woluwensis NM-35 [PVZO]
272057
271973
-
Leu
CAA
[ENA]
¡û
>W1810424184
PYUI01000014
Actinomycetota
Arthrobacter sp. H-02-3 LBUM149 [PYUI]
87075
86993
-
Leu
CAA
[ENA]
¡û
>W1810474987
QAIQ01000719
Actinomycetota
Arthrobacter sp. HMWF013 [QAIQ]
13494
13576
+
Leu
CAA
[ENA]
¡û
>W1810569993
QEHL01000026
Actinomycetota
Pseudarthrobacter sp. AG30 [QEHL]
2853
2771
-
Leu
CAA
[ENA]
¡û
>W1810676795
QKMG01000002
Actinomycetota
Paenarthrobacter nicotinovorans 25_8 [QKMG]
222161
222243
+
Leu
CAA
[ENA]
¡û
>W1810677258
QKMO01000008
Actinomycetota
Arthrobacter sp. RC1.1 241 [QKMO]
16827
16745
-
Leu
CAA
[ENA]
¡û
>W1810695550
QLNP01000067
Actinomycetota
Arthrobacter globiformis mrc11 [QLNP]
113008
113090
+
Leu
CAA
[ENA]
¡û
>W1810707034
QMKP01000003
Actinomycetota
Arthrobacter sp. AQ5-06 [QMKP]
211401
211483
+
Leu
CAA
[ENA]
¡û
>W1810786739
QRCU01000016
Actinomycetota
Arthrobacter silvisoli NEAU-SA1 [QRCU]
38732
38814
+
Leu
CAA
[ENA]
¡û
>W1810789446
QRGQ01000007
Actinomycetota
Arthrobacter sp. RT-1 [QRGQ]
110253
110171
-
Leu
CAA
[ENA]
¡û
>W1510018516
BBUD01000661
Actinomycetota
Arthrobacter sp. Hiyo1 [BBUD]
1290
1208
-
Leu
CAA
[ENA]
¡û
>W1510018539
BBUE01000174
Actinomycetota
Arthrobacter sp. Hiyo6 [BBUE]
1293
1211
-
Leu
CAA
[ENA]
¡û
>C11100997
CP002379
Actinomycetota
Pseudarthrobacter phenanthrenivorans Sphe3 [CP002379]
1794131
1794213
+
Leu
CAA
[Ensembl]
¡û
>W1511319620
JPZK01000025
Actinomycetota
Arthrobacter sp. MWB30 [JPZK]
107181
107263
+
Leu
CAA
[ENA]
¡û
>W1511489593
JWTB01000005
Actinomycetota
Pseudarthrobacter phenanthrenivorans SWC37 [JWTB]
116305
116389
+
Leu
CAA
[ENA]
¡û
>W1511523722
JYCN01000015
Actinomycetota
Arthrobacter sp. SPG23 [JYCN]
216082
216164
+
Leu
CAA
[ENA]
¡û
>W1511551618
JZTW01000004
Actinomycetota
Pseudarthrobacter chlorophenolicus Mor30.16 [JZTW]
144993
145075
+
Leu
CAA
[ENA]
¡û
>W1511685663
LFQH01000012
Actinomycetota
Arthrobacter sp. ZBG10 [LFQH]
65903
65985
+
Leu
CAA
[ENA]
¡û
>C161060759
CP013747
Actinomycetota
Pseudarthrobacter sulfonivorans Ar51 [CP013747]
437038
436956
-
Leu
CAA
[Ensembl]
¡û
>C161068057
CP014196
Actinomycetota
Arthrobacter sp. ATCC 21022 [CP014196]
1803700
1803784
+
Leu
CAA
-
¡û
>C161073214
CP014518
Actinomycetota
Sinomonas atrocyanea KCTC 3377 [CP014518]
2079919
2080003
+
Leu
CAA
[Ensembl]
¡û
>W121123797
BAEG01000040
Actinomycetota
Arthrobacter globiformis NBRC 12137 [BAEG]
16227
16309
+
Leu
CAA
[ENA]
¡û
>W1610050294
BBFS01000004
Actinomycetota
Paenarthrobacter nitroguajacolicus JCM 14115 [BBFS]
84302
84387
+
Leu
CAA
[ENA]
¡û
>W1610067348
BCQN01000002
Actinomycetota
Arthrobacter woluwensis NBRC 107840 [BCQN]
209717
209801
+
Leu
CAA
[ENA]
¡û
>W1610515412
FMAZ01000002
Actinomycetota
Pseudarthrobacter enclensis [FMAZ]
204558
204642
+
Leu
CAA
[ENA]
¡û
>W1610527148
JPWK01000037
Actinomycetota
Arthrobacter sp. ATCC 21022 ATCC 21022 KY 3901 [JPWK]
152089
152173
+
Leu
CAA
[ENA]
¡û
>W1610734393
LMLR01000013
Actinomycetota
Arthrobacter sp. Leaf69 [LMLR]
227747
227829
+
Leu
CAA
[ENA]
¡û
>W1610737732
LMOI01000023
Actinomycetota
Arthrobacter sp. Leaf137 [LMOI]
116556
116474
-
Leu
CAA
[ENA]
¡û
>W1610737874
LMOL01000017
Actinomycetota
Arthrobacter sp. Leaf141 [LMOL]
518
436
-
Leu
CAA
[ENA]
¡û
>W1610737981
LMON01000028
Actinomycetota
Arthrobacter sp. Leaf145 [LMON]
64202
64120
-
Leu
CAA
[ENA]
¡û
>W1610738637
LMPC01000012
Actinomycetota
Arthrobacter sp. Leaf337 [LMPC]
815578
815660
+
Leu
CAA
[ENA]
¡û
>W1610742368
LMSB01000007
Actinomycetota
Arthrobacter sp. Soil736 [LMSB]
92817
92735
-
Leu
CAA
[ENA]
¡û
>W1610742630
LMSF01000031
Actinomycetota
Arthrobacter sp. Soil761 [LMSF]
74372
74454
+
Leu
CAA
[ENA]
¡û
>W1610742664
LMSG01000017
Actinomycetota
Arthrobacter sp. Soil762 [LMSG]
145115
145197
+
Leu
CAA
[ENA]
¡û
>W1610742728
LMSH01000003
Actinomycetota
Arthrobacter sp. Soil763 [LMSH]
643117
643033
-
Leu
CAA
[ENA]
¡û
>W1610742750
LMSI01000019
Actinomycetota
Arthrobacter sp. Soil764 [LMSI]
111435
111517
+
Leu
CAA
[ENA]
¡û
>W1610767789
LNQM01000002
Actinomycetota
Pseudarthrobacter enclensis [LNQM]
204558
204642
+
Leu
CAA
[ENA]
¡û
>W1610774336
LNUT01000004
Actinomycetota
Arthrobacter sp. EPSL27 [LNUT]
1332733
1332815
+
Leu
CAA
[ENA]
¡û
>W1610850386
LQAP01000003
Actinomycetota
Arthrobacter sp. B6 [LQAP]
381709
381627
-
Leu
CAA
[ENA]
¡û
>W1610989943
LWLP01000001
Actinomycetota
Arthrobacter sp. OY3WO11 [LWLP]
2073021
2073103
+
Leu
CAA
[ENA]
¡û
>W1710046693
BBFS01000004
Actinomycetota
Paenarthrobacter nitroguajacolicus JCM 14115 [BBFS]
84302
84387
+
Leu
CAA
[ENA]
¡û
>W1710064721
BCQN01000002
Actinomycetota
Arthrobacter woluwensis NBRC 107840 [BCQN]
209717
209801
+
Leu
CAA
[ENA]
¡û
>W1710084543
BDMH01000018
Actinomycetota
Paenarthrobacter ureafaciens KI72 [BDMH]
86019
86101
+
Leu
CAA
[ENA]
¡û
>W1710501102
FMAZ01000002
Actinomycetota
Pseudarthrobacter enclensis [FMAZ]
204558
204642
+
Leu
CAA
[ENA]
¡û
>W1710518901
FNEI01000003
Actinomycetota
Arthrobacter cupressi [FNEI]
369575
369657
+
Leu
CAA
[ENA]
¡û
>W1710521099
FNGC01000016
Actinomycetota
Arthrobacter sp. ok362 [FNGC]
50164
50082
-
Leu
CAA
[ENA]
¡û
>W1710521141
FNGD01000009
Actinomycetota
Arthrobacter sp. ov407 [FNGD]
68815
68733
-
Leu
CAA
[ENA]
¡û
>W1710525664
FNJS01000013
Actinomycetota
Arthrobacter sp. ok909 [FNJS]
28816
28898
+
Leu
CAA
[ENA]
¡û
>W1710527680
FNLE01000003
Actinomycetota
Pseudarthrobacter chlorophenolicus [FNLE]
3286063
3285981
-
Leu
CAA
[ENA]
¡û
>W1710535408
FNSN01000003
Actinomycetota
Arthrobacter woluwensis [FNSN]
2107621
2107705
+
Leu
CAA
[ENA]
¡û
>W1710550084
FOEZ01000009
Actinomycetota
Arthrobacter sp. OV608 [FOEZ]
106683
106765
+
Leu
CAA
[ENA]
¡û
>W1710577652
FPAY01000017
Actinomycetota
Arthrobacter sp. ov118 [FPAY]
17794
17876
+
Leu
CAA
[ENA]
¡û
>W1710603437
FUZB01000003
Actinomycetota
Arthrobacter sp. 31Cvi3.1E [FUZB]
254179
254097
-
Leu
CAA
[ENA]
¡û
>W1710603535
FUZD01000011
Actinomycetota
Arthrobacter sp. 49Tsu3.1M3 [FUZD]
20153
20071
-
Leu
CAA
[ENA]
¡û
>W1710605033
FVZL01000005
Actinomycetota
Arthrobacter sp. P2b [FVZL]
47966
47884
-
Leu
CAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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