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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.96363 (4 seq.)
>W1810235168
PPEU01000034
Chlamydiota
Candidatus Similichlamydia epinepheli epinepheli GCCT14 [PPEU]
3080
2996
-
Leu
TAA
[ENA]
¡û
>W1810235173
PPEU01000049
Chlamydiota
Candidatus Similichlamydia epinepheli epinepheli GCCT14 [PPEU]
3727
3643
-
Leu
TAA
[ENA]
¡û
>W1810235183
PPEU01000098
Chlamydiota
Candidatus Similichlamydia epinepheli epinepheli GCCT14 [PPEU]
703
786
+
Leu
TAA
[ENA]
¡û
>W1810763527
QQBG01000017
Chlamydiota
Candidatus Similichlamydia laticola laticola Hat2 [QQBG]
57907
57824
-
Leu
TAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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