tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001808)

Anticodon = CCG

HIT: 11 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.272563 (11 seq.)
>WENV170624130 FUWD013175373 [FUWD] metagenome; unknown 8225 8301 + Arg CCG [ENA]
>WENV170632412 FUWD013381548 [FUWD] metagenome; unknown 8225 8301 + Arg CCG [ENA]
>SRA1030156 SRR035087.234854 454 Sequencing (SRP001808) 71 146 + Arg CCG [SRA]
>SRA1033686 SRR035088.325679 454 Sequencing (SRP001809) 473 397 - Arg CCG [SRA]
>SRA1034478 SRR035089.105695 454 Sequencing (SRP001810) 231 307 + Arg CCG [SRA]
>SRA1035021 SRR035089.220716 454 Sequencing (SRP001810) 173 248 + Arg CCG [SRA]
>SRA1047657 SRR035094.13338 454 Sequencing (SRP001815) 214 290 + Arg CCG [SRA]
>SRA1047683 SRR035094.19607 454 Sequencing (SRP001815) 296 220 - Arg CCG [SRA]
>SRA1048093 SRR035094.107205 454 Sequencing (SRP001815) 407 331 - Arg CCG [SRA]
>SRA1048166 SRR035094.121140 454 Sequencing (SRP001815) 297 221 - Arg CCG [SRA]
>SRA1049312 SRR035095.54840 454 Sequencing (SRP001816) 162 86 - Arg CCG [SRA]
Identical group No.272593 (13 seq.)
>WENV170621642 FUWD013066891 [FUWD] metagenome; unknown 1004 1080 + Arg CCG [ENA]
>WENV170629832 FUWD013282834 [FUWD] metagenome; unknown 1004 1080 + Arg CCG [ENA]
>WENV170723226 LSQX01259727 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 75 1 - Arg CCG [ENA]
>SRA1029307 SRR035087.106793 454 Sequencing (SRP001808) 178 254 + Arg CCG [SRA]
>SRA1029948 SRR035087.206764 454 Sequencing (SRP001808) 178 254 + Arg CCG [SRA]
>SRA1030023 SRR035087.217992 454 Sequencing (SRP001808) 103 179 + Arg CCG [SRA]
>SRA1030483 SRR035087.285536 454 Sequencing (SRP001808) 121 45 - Arg CCG [SRA]
>SRA1032162 SRR035087.566305 454 Sequencing (SRP001808) 146 222 + Arg CCG [SRA]
>SRA1034631 SRR035089.140660 454 Sequencing (SRP001810) 289 365 + Arg CCG [SRA]
>SRA1035354 SRR035089.289269 454 Sequencing (SRP001810) 205 129 - Arg CCG [SRA]
>SRA1035816 SRR035089.381053 454 Sequencing (SRP001810) 153 77 - Arg CCG [SRA]
>SRA1036041 SRR035089.432625 454 Sequencing (SRP001810) 152 76 - Arg CCG [SRA]
>SRA1050538 SRR035095.286037 454 Sequencing (SRP001816) 187 263 + Arg CCG [SRA]
Identical group No.272879 (8 seq.)
>WENV170625174 FUWD013193127 [FUWD] metagenome; unknown 362 286 - Arg CCG [ENA]
>WENV170633430 FUWD013396202 [FUWD] metagenome; unknown 362 286 - Arg CCG [ENA]
>SRA1030496 SRR035087.288032 454 Sequencing (SRP001808) 449 373 - Arg CCG [SRA]
>SRA1032668 SRR035088.75765 454 Sequencing (SRP001809) 23 99 + Arg CCG [SRA]
>SRA1032861 SRR035088.117854 454 Sequencing (SRP001809) 466 390 - Arg CCG [SRA]
>SRA1036331 SRR035089.496812 454 Sequencing (SRP001810) 294 218 - Arg CCG [SRA]
>SRA1036540 SRR035089.544093 454 Sequencing (SRP001810) 63 139 + Arg CCG [SRA]
>SRA1048486 SRR035094.184750 454 Sequencing (SRP001815) 254 178 - Arg CCG [SRA]
Identical group No.272884 (5 seq.)
>WENV170603337 FUWD010302792 [FUWD] metagenome; unknown 114 38 - Arg CCG [ENA]
>SRA1031025 SRR035087.361312 454 Sequencing (SRP001808) 100 24 - Arg CCG [SRA]
>SRA1036351 SRR035089.500267 454 Sequencing (SRP001810) 205 281 + Arg CCG [SRA]
>SRA1036486 SRR035089.531916 454 Sequencing (SRP001810) 179 103 - Arg CCG [SRA]
>SRA1043566 SRR035092.139114 454 Sequencing (SRP001813) 112 36 - Arg CCG [SRA]
Identical group No.300443 (2 seq.)
>WENV170779142 LZCG01001636 [LZCG] oil field metagenome; sample BH-FW-1 from oil reservoir 1163 1090 - Arg CCG [ENA]
>SRA1030031 SRR035087.218664 454 Sequencing (SRP001808) 310 383 + Arg CCG [SRA]
Identical group No.300559 (6 seq.)
>W131162454 AQYX01000172 Atribacterota Atribacteria bacterium SCGC AAA252-M02 OP9 bacterium SCGC AAA252-M02 [AQYX] 12493 12417 - Arg CCG [ENA]
>W131193727 ASOX01000018 Atribacterota Atribacteria bacterium SCGC AB-164-P05 OP9 bacterium SCGC AB-164-P05 [ASOX] 6218 6294 + Arg CCG [ENA]
>W131193777 ASPA01000072 Atribacterota Atribacteria bacterium SCGC AAA255-G05 OP9 bacterium SCGC AAA255-G05 [ASPA] 1168 1092 - Arg CCG [ENA]
>W131203650 ASZL01000025 Atribacterota Atribacteria bacterium SCGC AB-164-M20 OP9 bacterium SCGC AB-164-M20 [ASZL] 6127 6051 - Arg CCG [ENA]
>W141139548 AWNT01000012 Atribacterota Atribacteria bacterium JGI OTU-1 [AWNT] 12493 12417 - Arg CCG [ENA]
>SRA1030715 SRR035087.317928 454 Sequencing (SRP001808) 54 130 + Arg CCG [SRA]
Identical group No.300598 (3 seq.)
>WENV170611687 FUWD012374788 [FUWD] metagenome; unknown 48 121 + Arg CCG [ENA]
>SRA1019549 SRR035082.475704 454 Sequencing (SRP001803) 357 430 + Arg CCG [SRA]
>SRA1030968 SRR035087.356170 454 Sequencing (SRP001808) 48 121 + Arg CCG [SRA]
Identical group No.300662 (2 seq.)
>WENV170605055 FUWD010444857 [FUWD] metagenome; unknown 167 91 - Arg CCG [ENA]
>SRA1031332 SRR035087.413831 454 Sequencing (SRP001808) 334 258 - Arg CCG [SRA]
Identical group No.484284 (2 seq.)
>WENV170613066 FUWD012778583 [FUWD] metagenome; unknown 441 366 - Arg CCG [ENA]
>SRA1030324 SRR035087.263738 454 Sequencing (SRP001808) 43 118 + Arg CCG [SRA]
Identical group No.654548 (7 seq.)
>WENV170612314 FUWD012570647 [FUWD] metagenome; unknown 24 95 + Arg CCG [ENA]
>SRA1029420 SRR035087.124824 454 Sequencing (SRP001808) 136 65 - Arg CCG [SRA]
>SRA1029465 SRR035087.131725 454 Sequencing (SRP001808) 136 65 - Arg CCG [SRA]
>SRA1031089 SRR035087.371239 454 Sequencing (SRP001808) 136 65 - Arg CCG [SRA]
>SRA1035587 SRR035089.335355 454 Sequencing (SRP001810) 318 247 - Arg CCG [SRA]
>SRA1035719 SRR035089.360945 454 Sequencing (SRP001810) 33 104 + Arg CCG [SRA]
>SRA1036044 SRR035089.433391 454 Sequencing (SRP001810) 155 84 - Arg CCG [SRA]
Identical group No.672317 (5 seq.)
>WENV170621353 FUWD013056534 [FUWD] metagenome; unknown 171 99 - Arg CCG [ENA]
>WENV170629530 FUWD013272944 [FUWD] metagenome; unknown 171 99 - Arg CCG [ENA]
>SRA1017853 SRR035082.206712 454 Sequencing (SRP001803) 226 297 + Arg CCG [SRA]
>SRA1029400 SRR035087.121458 454 Sequencing (SRP001808) 360 432 + Arg CCG [SRA]
>SRA1048014 SRR035094.89016 454 Sequencing (SRP001815) 262 190 - Arg CCG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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