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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
454 Sequencing (SRP001809)
Anticodon = TAC
HIT:
29 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.249662 (13 seq.)
>WENV180078344
MPMB02099948
[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
1720
1643
-
Val
TAC
[ENA]
¢þ
>WENV183805418
PVBE011018182
[PVBE] marine metagenome; water
3998
4075
+
Val
TAC
[ENA]
¢þ
>WENV170210484
CEPV01209320
[CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
304
227
-
Val
TAC
[ENA]
¢þ
>WENV170396110
CEUC01182270
[CEUC] marine metagenome genome assembly TARA_137_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
108
31
-
Val
TAC
[ENA]
¢þ
>WENV170399071
CEUD01336996
[CEUD] marine metagenome genome assembly TARA_137_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
203
280
+
Val
TAC
[ENA]
¢þ
>WENV170536023
CEWP01139573
[CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
1890
1813
-
Val
TAC
[ENA]
¢þ
>WENV170571820
FLOH01000324
[FLOH] marine metagenome; water
116617
116694
+
Val
TAC
[ENA]
¢þ
>WENV170619782
FUWD013021169
[FUWD] metagenome; unknown
5275
5198
-
Val
TAC
[ENA]
¢þ
>WENV170627901
FUWD013239410
[FUWD] metagenome; unknown
5275
5198
-
Val
TAC
[ENA]
¢þ
>SRA1032887
SRR035088.121941
454 Sequencing (SRP001809)
415
338
-
Val
TAC
[SRA]
>SRA1033839
SRR035088.371768
454 Sequencing (SRP001809)
324
247
-
Val
TAC
[SRA]
>SRA1033917
SRR035088.406686
454 Sequencing (SRP001809)
92
15
-
Val
TAC
[SRA]
>SRA1048932
SRR035094.290430
454 Sequencing (SRP001815)
232
155
-
Val
TAC
[SRA]
Identical group No.272623 (114 seq.)
>C018237
CP000607
Chlorobiota
Chlorobium phaeovibrioides [CP000607]
155961
156037
+
Val
TAC
[Ensembl]
¡û
>WENV183812096
PYLN01000005
[PYLN] freshwater metagenome; meromictic lake
32585
32661
+
Val
TAC
[ENA]
¢þ
>WENV170613771
FUWD012819304
[FUWD] metagenome; unknown
13402
13326
-
Val
TAC
[ENA]
¢þ
>W09103359
AAJD01000008
Chlorobiota
Chlorobium phaeovibrioides DSM 265 [AAJD]
10274
10350
+
Val
TAC
[ENA]
¡û
>SRA1018642
SRR035082.326690
454 Sequencing (SRP001803)
88
164
+
Val
TAC
[SRA]
>SRA1019935
SRR035083.24967
454 Sequencing (SRP001804)
183
259
+
Val
TAC
[SRA]
>SRA1020241
SRR035083.80381
454 Sequencing (SRP001804)
404
328
-
Val
TAC
[SRA]
>SRA1020255
SRR035083.84033
454 Sequencing (SRP001804)
417
493
+
Val
TAC
[SRA]
>SRA1020351
SRR035083.100739
454 Sequencing (SRP001804)
336
412
+
Val
TAC
[SRA]
>SRA1020403
SRR035083.109130
454 Sequencing (SRP001804)
146
222
+
Val
TAC
[SRA]
>SRA1020466
SRR035083.119450
454 Sequencing (SRP001804)
165
241
+
Val
TAC
[SRA]
>SRA1020514
SRR035083.128645
454 Sequencing (SRP001804)
391
315
-
Val
TAC
[SRA]
>SRA1020518
SRR035083.128958
454 Sequencing (SRP001804)
155
231
+
Val
TAC
[SRA]
>SRA1020541
SRR035083.131812
454 Sequencing (SRP001804)
186
262
+
Val
TAC
[SRA]
>SRA1020562
SRR035083.135220
454 Sequencing (SRP001804)
48
124
+
Val
TAC
[SRA]
>SRA1020697
SRR035083.153322
454 Sequencing (SRP001804)
125
201
+
Val
TAC
[SRA]
>SRA1020729
SRR035083.156529
454 Sequencing (SRP001804)
186
110
-
Val
TAC
[SRA]
>SRA1020843
SRR035083.172311
454 Sequencing (SRP001804)
210
286
+
Val
TAC
[SRA]
>SRA1020870
SRR035083.175853
454 Sequencing (SRP001804)
94
18
-
Val
TAC
[SRA]
>SRA1020872
SRR035083.176327
454 Sequencing (SRP001804)
294
218
-
Val
TAC
[SRA]
>SRA1021076
SRR035083.205821
454 Sequencing (SRP001804)
112
188
+
Val
TAC
[SRA]
>SRA1021089
SRR035083.206912
454 Sequencing (SRP001804)
391
315
-
Val
TAC
[SRA]
>SRA1021157
SRR035083.217608
454 Sequencing (SRP001804)
284
360
+
Val
TAC
[SRA]
>SRA1021168
SRR035083.219371
454 Sequencing (SRP001804)
148
72
-
Val
TAC
[SRA]
>SRA1021248
SRR035083.228525
454 Sequencing (SRP001804)
184
260
+
Val
TAC
[SRA]
>SRA1021278
SRR035083.234738
454 Sequencing (SRP001804)
89
165
+
Val
TAC
[SRA]
>SRA1021303
SRR035083.239513
454 Sequencing (SRP001804)
240
316
+
Val
TAC
[SRA]
>SRA1021358
SRR035083.249729
454 Sequencing (SRP001804)
295
219
-
Val
TAC
[SRA]
>SRA1021380
SRR035083.253001
454 Sequencing (SRP001804)
294
218
-
Val
TAC
[SRA]
>SRA1021447
SRR035083.260253
454 Sequencing (SRP001804)
461
385
-
Val
TAC
[SRA]
>SRA1021460
SRR035083.261895
454 Sequencing (SRP001804)
255
179
-
Val
TAC
[SRA]
>SRA1021605
SRR035083.280907
454 Sequencing (SRP001804)
255
179
-
Val
TAC
[SRA]
>SRA1021677
SRR035083.291546
454 Sequencing (SRP001804)
225
301
+
Val
TAC
[SRA]
>SRA1021729
SRR035083.298065
454 Sequencing (SRP001804)
49
125
+
Val
TAC
[SRA]
>SRA1021756
SRR035083.303285
454 Sequencing (SRP001804)
434
510
+
Val
TAC
[SRA]
>SRA1021778
SRR035083.307667
454 Sequencing (SRP001804)
268
344
+
Val
TAC
[SRA]
>SRA1021888
SRR035083.325187
454 Sequencing (SRP001804)
88
164
+
Val
TAC
[SRA]
>SRA1022062
SRR035083.347528
454 Sequencing (SRP001804)
89
165
+
Val
TAC
[SRA]
>SRA1022168
SRR035083.362289
454 Sequencing (SRP001804)
236
312
+
Val
TAC
[SRA]
>SRA1022241
SRR035083.373404
454 Sequencing (SRP001804)
50
126
+
Val
TAC
[SRA]
>SRA1022294
SRR035083.383987
454 Sequencing (SRP001804)
186
262
+
Val
TAC
[SRA]
>SRA1022316
SRR035083.387834
454 Sequencing (SRP001804)
367
443
+
Val
TAC
[SRA]
>SRA1022406
SRR035083.401450
454 Sequencing (SRP001804)
187
263
+
Val
TAC
[SRA]
>SRA1022497
SRR035083.414083
454 Sequencing (SRP001804)
164
240
+
Val
TAC
[SRA]
>SRA1022501
SRR035083.414577
454 Sequencing (SRP001804)
176
100
-
Val
TAC
[SRA]
>SRA1022530
SRR035083.421468
454 Sequencing (SRP001804)
37
113
+
Val
TAC
[SRA]
>SRA1022532
SRR035083.421749
454 Sequencing (SRP001804)
276
200
-
Val
TAC
[SRA]
>SRA1022580
SRR035083.428510
454 Sequencing (SRP001804)
194
270
+
Val
TAC
[SRA]
>SRA1022614
SRR035083.433320
454 Sequencing (SRP001804)
258
182
-
Val
TAC
[SRA]
>SRA1022732
SRR035083.450008
454 Sequencing (SRP001804)
111
187
+
Val
TAC
[SRA]
>SRA1022736
SRR035083.450766
454 Sequencing (SRP001804)
349
273
-
Val
TAC
[SRA]
>SRA1022739
SRR035083.451993
454 Sequencing (SRP001804)
127
203
+
Val
TAC
[SRA]
>SRA1022770
SRR035083.456811
454 Sequencing (SRP001804)
128
204
+
Val
TAC
[SRA]
>SRA1022777
SRR035083.459092
454 Sequencing (SRP001804)
335
411
+
Val
TAC
[SRA]
>SRA1022959
SRR035083.494719
454 Sequencing (SRP001804)
337
413
+
Val
TAC
[SRA]
>SRA1030047
SRR035087.220738
454 Sequencing (SRP001808)
109
33
-
Val
TAC
[SRA]
>SRA1030160
SRR035087.235122
454 Sequencing (SRP001808)
85
161
+
Val
TAC
[SRA]
>SRA1032793
SRR035088.103985
454 Sequencing (SRP001809)
426
350
-
Val
TAC
[SRA]
>SRA1033431
SRR035088.255967
454 Sequencing (SRP001809)
109
33
-
Val
TAC
[SRA]
>SRA1033521
SRR035088.277667
454 Sequencing (SRP001809)
329
405
+
Val
TAC
[SRA]
>SRA1033740
SRR035088.341269
454 Sequencing (SRP001809)
335
259
-
Val
TAC
[SRA]
>SRA1033921
SRR035088.408059
454 Sequencing (SRP001809)
28
104
+
Val
TAC
[SRA]
>SRA1034077
SRR035088.476728
454 Sequencing (SRP001809)
121
45
-
Val
TAC
[SRA]
>SRA1034084
SRR035088.481203
454 Sequencing (SRP001809)
80
4
-
Val
TAC
[SRA]
>SRA1034808
SRR035089.177869
454 Sequencing (SRP001810)
324
400
+
Val
TAC
[SRA]
>SRA1035348
SRR035089.287863
454 Sequencing (SRP001810)
428
504
+
Val
TAC
[SRA]
>SRA1036828
SRR035090.18897
454 Sequencing (SRP001811)
129
205
+
Val
TAC
[SRA]
>SRA1037342
SRR035090.119135
454 Sequencing (SRP001811)
133
209
+
Val
TAC
[SRA]
>SRA1037353
SRR035090.120883
454 Sequencing (SRP001811)
94
18
-
Val
TAC
[SRA]
>SRA1037547
SRR035090.151455
454 Sequencing (SRP001811)
156
80
-
Val
TAC
[SRA]
>SRA1037548
SRR035090.151576
454 Sequencing (SRP001811)
245
169
-
Val
TAC
[SRA]
>SRA1037633
SRR035090.165677
454 Sequencing (SRP001811)
152
76
-
Val
TAC
[SRA]
>SRA1037711
SRR035090.179320
454 Sequencing (SRP001811)
308
232
-
Val
TAC
[SRA]
>SRA1037784
SRR035090.194091
454 Sequencing (SRP001811)
104
180
+
Val
TAC
[SRA]
>SRA1037797
SRR035090.198038
454 Sequencing (SRP001811)
20
96
+
Val
TAC
[SRA]
>SRA1037923
SRR035090.218608
454 Sequencing (SRP001811)
260
336
+
Val
TAC
[SRA]
>SRA1038078
SRR035090.242595
454 Sequencing (SRP001811)
311
387
+
Val
TAC
[SRA]
>SRA1038111
SRR035090.247577
454 Sequencing (SRP001811)
401
325
-
Val
TAC
[SRA]
>SRA1038267
SRR035090.277253
454 Sequencing (SRP001811)
3
79
+
Val
TAC
[SRA]
>SRA1038373
SRR035090.292965
454 Sequencing (SRP001811)
420
344
-
Val
TAC
[SRA]
>SRA1038701
SRR035090.352072
454 Sequencing (SRP001811)
267
191
-
Val
TAC
[SRA]
>SRA1038836
SRR035090.376324
454 Sequencing (SRP001811)
253
177
-
Val
TAC
[SRA]
>SRA1038853
SRR035090.380309
454 Sequencing (SRP001811)
82
6
-
Val
TAC
[SRA]
>SRA1038933
SRR035090.397227
454 Sequencing (SRP001811)
280
356
+
Val
TAC
[SRA]
>SRA1038950
SRR035090.398822
454 Sequencing (SRP001811)
420
344
-
Val
TAC
[SRA]
>SRA1039000
SRR035090.406306
454 Sequencing (SRP001811)
122
46
-
Val
TAC
[SRA]
>SRA1039014
SRR035090.407655
454 Sequencing (SRP001811)
154
78
-
Val
TAC
[SRA]
>SRA1039139
SRR035090.430913
454 Sequencing (SRP001811)
110
186
+
Val
TAC
[SRA]
>SRA1039153
SRR035090.433101
454 Sequencing (SRP001811)
133
209
+
Val
TAC
[SRA]
>SRA1039190
SRR035090.440024
454 Sequencing (SRP001811)
228
152
-
Val
TAC
[SRA]
>SRA1039220
SRR035090.446673
454 Sequencing (SRP001811)
335
259
-
Val
TAC
[SRA]
>SRA1039493
SRR035090.503007
454 Sequencing (SRP001811)
243
319
+
Val
TAC
[SRA]
>SRA1039730
SRR035090.555305
454 Sequencing (SRP001811)
290
366
+
Val
TAC
[SRA]
>SRA1039896
SRR035090.596377
454 Sequencing (SRP001811)
1
77
+
Val
TAC
[SRA]
>SRA1040080
SRR035091.34465
454 Sequencing (SRP001812)
229
305
+
Val
TAC
[SRA]
>SRA1040304
SRR035091.75201
454 Sequencing (SRP001812)
354
278
-
Val
TAC
[SRA]
>SRA1045788
SRR035093.169739
454 Sequencing (SRP001814)
264
188
-
Val
TAC
[SRA]
>SRA1045967
SRR035093.206923
454 Sequencing (SRP001814)
106
30
-
Val
TAC
[SRA]
>SRA1046083
SRR035093.232459
454 Sequencing (SRP001814)
266
190
-
Val
TAC
[SRA]
>SRA1046457
SRR035093.313057
454 Sequencing (SRP001814)
78
2
-
Val
TAC
[SRA]
>SRA1054080
SRR035099.52354
454 Sequencing (SRP001820)
336
260
-
Val
TAC
[SRA]
>SRA1054116
SRR035099.61985
454 Sequencing (SRP001820)
151
75
-
Val
TAC
[SRA]
>SRA1054141
SRR035099.68754
454 Sequencing (SRP001820)
384
460
+
Val
TAC
[SRA]
>SRA1054187
SRR035099.80065
454 Sequencing (SRP001820)
336
260
-
Val
TAC
[SRA]
>SRA1054294
SRR035099.100826
454 Sequencing (SRP001820)
358
282
-
Val
TAC
[SRA]
>SRA1054336
SRR035099.108393
454 Sequencing (SRP001820)
309
385
+
Val
TAC
[SRA]
>SRA1054418
SRR035099.129377
454 Sequencing (SRP001820)
456
380
-
Val
TAC
[SRA]
>SRA1054474
SRR035099.139987
454 Sequencing (SRP001820)
248
172
-
Val
TAC
[SRA]
>SRA1054479
SRR035099.141335
454 Sequencing (SRP001820)
279
203
-
Val
TAC
[SRA]
>SRA1054503
SRR035099.148171
454 Sequencing (SRP001820)
309
385
+
Val
TAC
[SRA]
>SRA1054565
SRR035099.164502
454 Sequencing (SRP001820)
346
270
-
Val
TAC
[SRA]
>SRA1054620
SRR035099.175014
454 Sequencing (SRP001820)
271
347
+
Val
TAC
[SRA]
>SRA1054796
SRR035099.216630
454 Sequencing (SRP001820)
289
213
-
Val
TAC
[SRA]
>SRA1054870
SRR035099.240728
454 Sequencing (SRP001820)
192
116
-
Val
TAC
[SRA]
Identical group No.272828 (4 seq.)
>WENV170623460
FUWD013152251
[FUWD] metagenome; unknown
835
911
+
Val
TAC
[ENA]
¢þ
>WENV170631725
FUWD013363173
[FUWD] metagenome; unknown
835
911
+
Val
TAC
[ENA]
¢þ
>SRA1033770
SRR035088.350244
454 Sequencing (SRP001809)
92
168
+
Val
TAC
[SRA]
>SRA1036003
SRR035089.425227
454 Sequencing (SRP001810)
109
33
-
Val
TAC
[SRA]
Identical group No.272911 (3 seq.)
>WENV170612533
FUWD012629978
[FUWD] metagenome; unknown
26
102
+
Val
TAC
[ENA]
¢þ
>SRA1033814
SRR035088.362732
454 Sequencing (SRP001809)
255
179
-
Val
TAC
[SRA]
>SRA1036524
SRR035089.537172
454 Sequencing (SRP001810)
32
108
+
Val
TAC
[SRA]
Identical group No.300316 (7 seq.)
>WENV170602321
FUWD010226285
[FUWD] metagenome; unknown
929
853
-
Val
TAC
[ENA]
¢þ
>SRA1017470
SRR035082.145279
454 Sequencing (SRP001803)
451
375
-
Val
TAC
[SRA]
>SRA1029132
SRR035087.79073
454 Sequencing (SRP001808)
292
368
+
Val
TAC
[SRA]
>SRA1029864
SRR035087.194302
454 Sequencing (SRP001808)
177
101
-
Val
TAC
[SRA]
>SRA1032971
SRR035088.142027
454 Sequencing (SRP001809)
94
170
+
Val
TAC
[SRA]
>SRA1040951
SRR035091.172965
454 Sequencing (SRP001812)
122
198
+
Val
TAC
[SRA]
>SRA1042282
SRR035091.367213
454 Sequencing (SRP001812)
204
280
+
Val
TAC
[SRA]
Identical group No.358766 (6 seq.)
>WENV170622503
FUWD013107458
[FUWD] metagenome; unknown
1344
1268
-
Val
TAC
[ENA]
¢þ
>WENV170630728
FUWD013321778
[FUWD] metagenome; unknown
1344
1268
-
Val
TAC
[ENA]
¢þ
>SRA1033423
SRR035088.253420
454 Sequencing (SRP001809)
10
86
+
Val
TAC
[SRA]
>SRA1040237
SRR035091.64529
454 Sequencing (SRP001812)
98
174
+
Val
TAC
[SRA]
>SRA1043127
SRR035092.54654
454 Sequencing (SRP001813)
148
224
+
Val
TAC
[SRA]
>SRA1044134
SRR035092.229523
454 Sequencing (SRP001813)
19
95
+
Val
TAC
[SRA]
Identical group No.415306 (1 seq.)
>SRA1032514
SRR035088.34613
454 Sequencing (SRP001809)
391
467
+
Val
TAC
[SRA]
Identical group No.415316 (1 seq.)
>SRA1032678
SRR035088.77527
454 Sequencing (SRP001809)
103
26
-
Val
TAC
[SRA]
Identical group No.415355 (1 seq.)
>SRA1033148
SRR035088.183287
454 Sequencing (SRP001809)
309
233
-
Val
TAC
[SRA]
Identical group No.415388 (1 seq.)
>SRA1033621
SRR035088.305141
454 Sequencing (SRP001809)
202
278
+
Val
TAC
[SRA]
Identical group No.415410 (1 seq.)
>SRA1033963
SRR035088.424262
454 Sequencing (SRP001809)
118
194
+
Val
TAC
[SRA]
Identical group No.453378 (30 seq.)
>W131157557
AQSK01000195
Unclassified
Cloacimonetes bacterium SCGC AAA252-E13 KSB1 bacterium SCGC AAA252-E13 [AQSK]
43905
43980
+
Val
TAC
[ENA]
¡û
>W131157602
AQSM01000006
Unclassified
Cloacimonetes bacterium SCGC AAA252-N14 KSB1 bacterium SCGC AAA252-N14 [AQSM]
1587
1662
+
Val
TAC
[ENA]
¡û
>W131157675
AQSO01000151
Unclassified
Cloacimonetes bacterium SCGC AAA252-D03 KSB1 bacterium SCGC AAA252-D03 [AQSO]
21101
21176
+
Val
TAC
[ENA]
¡û
>W131192116
ASKN01000008
Unclassified
Cloacimonetes bacterium SCGC AAA252-F02 KSB1 bacterium SCGC AAA252-F02 [ASKN]
18275
18350
+
Val
TAC
[ENA]
¡û
>W131192156
ASKP01000044
Unclassified
Cloacimonetes bacterium SCGC AAA252-L05 KSB1 bacterium SCGC AAA252-L05 [ASKP]
7837
7762
-
Val
TAC
[ENA]
¡û
>W131192169
ASKQ01000018
Unclassified
Cloacimonetes bacterium SCGC AAA252-O17 KSB1 bacterium SCGC AAA252-O17 [ASKQ]
7893
7818
-
Val
TAC
[ENA]
¡û
>W131192958
ASNH01000106
Unclassified
Cloacimonetes bacterium SCGC AAA255-C20 KSB1 bacterium SCGC AAA255-C20 [ASNH]
1475
1550
+
Val
TAC
[ENA]
¡û
>W131192998
ASNI01000079
Unclassified
Cloacimonetes bacterium SCGC AAA252-N17 KSB1 bacterium SCGC AAA252-N17 [ASNI]
1590
1665
+
Val
TAC
[ENA]
¡û
>W131193019
ASNK01000003
Unclassified
Cloacimonetes bacterium SCGC AAA252-E20 KSB1 bacterium SCGC AAA252-E20 [ASNK]
32366
32441
+
Val
TAC
[ENA]
¡û
>W131193091
ASNN01000068
Unclassified
Cloacimonetes bacterium SCGC AAA252-I11 KSB1 bacterium SCGC AAA252-I11 [ASNN]
1566
1641
+
Val
TAC
[ENA]
¡û
>W131193110
ASNO01000013
Unclassified
Cloacimonetes bacterium SCGC AAA252-I16 KSB1 bacterium SCGC AAA252-I16 [ASNO]
44498
44573
+
Val
TAC
[ENA]
¡û
>W131193165
ASNS01000004
Unclassified
Cloacimonetes bacterium SCGC AAA252-P02 KSB1 bacterium SCGC AAA252-P02 [ASNS]
23944
23869
-
Val
TAC
[ENA]
¡û
>W131193188
ASNT01000022
Unclassified
Cloacimonetes bacterium SCGC AAA252-P10 KSB1 bacterium SCGC AAA252-P10 [ASNT]
34212
34287
+
Val
TAC
[ENA]
¡û
>W141139677
AWNX01000009
Unclassified
Cloacimonetes bacterium JGI OTU-1 [AWNX]
7914
7839
-
Val
TAC
[ENA]
¡û
>W141139722
AWNY01000029
Unclassified
Cloacimonetes bacterium JGI OTU-2 [AWNY]
21101
21176
+
Val
TAC
[ENA]
¡û
>WENV170624916
FUWD013188751
[FUWD] metagenome; unknown
1566
1491
-
Val
TAC
[ENA]
¢þ
>WENV170633175
FUWD013392462
[FUWD] metagenome; unknown
1566
1491
-
Val
TAC
[ENA]
¢þ
>SRA1026317
SRR035085.184943
454 Sequencing (SRP001806)
33
108
+
Val
TAC
[SRA]
>SRA1026457
SRR035085.210410
454 Sequencing (SRP001806)
164
89
-
Val
TAC
[SRA]
>SRA1026719
SRR035085.270427
454 Sequencing (SRP001806)
123
198
+
Val
TAC
[SRA]
>SRA1029050
SRR035087.65337
454 Sequencing (SRP001808)
129
54
-
Val
TAC
[SRA]
>SRA1029259
SRR035087.98902
454 Sequencing (SRP001808)
128
53
-
Val
TAC
[SRA]
>SRA1029402
SRR035087.121944
454 Sequencing (SRP001808)
130
55
-
Val
TAC
[SRA]
>SRA1031455
SRR035087.432889
454 Sequencing (SRP001808)
54
129
+
Val
TAC
[SRA]
>SRA1033443
SRR035088.258758
454 Sequencing (SRP001809)
296
371
+
Val
TAC
[SRA]
>SRA1034277
SRR035089.47020
454 Sequencing (SRP001810)
79
4
-
Val
TAC
[SRA]
>SRA1034848
SRR035089.185508
454 Sequencing (SRP001810)
428
353
-
Val
TAC
[SRA]
>SRA1036103
SRR035089.446336
454 Sequencing (SRP001810)
93
18
-
Val
TAC
[SRA]
>SRA1036293
SRR035089.489104
454 Sequencing (SRP001810)
94
19
-
Val
TAC
[SRA]
>SRA1048394
SRR035094.163878
454 Sequencing (SRP001815)
133
58
-
Val
TAC
[SRA]
Identical group No.453804 (8 seq.)
>WENV170608064
FUWD010888519
[FUWD] metagenome; unknown
88
161
+
Val
TAC
[ENA]
¢þ
>SRA1029255
SRR035087.98626
454 Sequencing (SRP001808)
294
366
+
Val
TAC
[SRA]
>SRA1032457
SRR035088.16341
454 Sequencing (SRP001809)
221
146
-
Val
TAC
[SRA]
>SRA1032745
SRR035088.93182
454 Sequencing (SRP001809)
390
317
-
Val
TAC
[SRA]
>SRA1032981
SRR035088.143263
454 Sequencing (SRP001809)
68
143
+
Val
TAC
[SRA]
>SRA1036130
SRR035089.450854
454 Sequencing (SRP001810)
88
161
+
Val
TAC
[SRA]
>SRA1042946
SRR035091.471766
454 Sequencing (SRP001812)
401
326
-
Val
TAC
[SRA]
>SRA1048235
SRR035094.131924
454 Sequencing (SRP001815)
126
54
-
Val
TAC
[SRA]
Identical group No.484349 (5 seq.)
>WENV170607934
FUWD010872829
[FUWD] metagenome; unknown
27
102
+
Val
TAC
[ENA]
¢þ
>SRA1017434
SRR035082.138543
454 Sequencing (SRP001803)
290
215
-
Val
TAC
[SRA]
>SRA1017460
SRR035082.143426
454 Sequencing (SRP001803)
290
215
-
Val
TAC
[SRA]
>SRA1030792
SRR035087.332389
454 Sequencing (SRP001808)
80
155
+
Val
TAC
[SRA]
>SRA1032644
SRR035088.70635
454 Sequencing (SRP001809)
198
273
+
Val
TAC
[SRA]
Identical group No.506981 (17 seq.)
>W1711662215
MQUF01000025
Thermodesulfobacteriota
Desulfobulbaceae bacterium DB1 [MQUF]
93114
93189
+
Val
TAC
[ENA]
¡û
>WENV183705417
PDWI01001522
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
45859
45784
-
Val
TAC
[ENA]
¢þ
>WENV183706010
PDWI01002914
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
98
23
-
Val
TAC
[ENA]
¢þ
>WENV183718763
PDWJ01006422
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
1797
1872
+
Val
TAC
[ENA]
¢þ
>WENV183721600
PDWJ01076947
[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
228
153
-
Val
TAC
[ENA]
¢þ
>WENV170007801
AMWB02158523
[AMWB] bioreactor metagenome; anode biofilm in microbial fuel cells
55503
55578
+
Val
TAC
[ENA]
¢þ
>WENV170612186
FUWD012527490
[FUWD] metagenome; unknown
210
285
+
Val
TAC
[ENA]
¢þ
>WENV170642164
JFJP01039360
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
3815
3740
-
Val
TAC
[ENA]
¢þ
>SRA1033260
SRR035088.209728
454 Sequencing (SRP001809)
210
285
+
Val
TAC
[SRA]
>SRA1038533
SRR035090.322459
454 Sequencing (SRP001811)
110
185
+
Val
TAC
[SRA]
>SRA1049085
SRR035095.17175
454 Sequencing (SRP001816)
54
129
+
Val
TAC
[SRA]
>SRA1053963
SRR035099.17647
454 Sequencing (SRP001820)
84
9
-
Val
TAC
[SRA]
>SRA1054438
SRR035099.133243
454 Sequencing (SRP001820)
296
221
-
Val
TAC
[SRA]
>SRA1054555
SRR035099.161489
454 Sequencing (SRP001820)
36
111
+
Val
TAC
[SRA]
>C161069063
CP014230
Thermodesulfobacteriota
Desulfomicrobium orale DSM 12838 [CP014230]
357276
357201
-
Val
TAC
[Ensembl]
¡û
>C131010882
CP003985
Thermodesulfobacteriota
Desulfocapsa sulfexigens DSM 10523 [CP003985]
3090200
3090275
+
Val
TAC
[Ensembl]
¡û
>WENV078110
AAFY01022051
Fossil microbial community from Whale Fall (Santa Cruz Basin)
689
614
-
Val
TAC
[ENA]
Identical group No.547990 (3 seq.)
>WENV170608029
FUWD010884564
[FUWD] metagenome; unknown
49
124
+
Val
TAC
[ENA]
¢þ
>SRA1033126
SRR035088.179648
454 Sequencing (SRP001809)
28
103
+
Val
TAC
[SRA]
>SRA1050000
SRR035095.174358
454 Sequencing (SRP001816)
451
376
-
Val
TAC
[SRA]
Identical group No.548897 (5 seq.)
>WENV170624851
FUWD013187968
[FUWD] metagenome; unknown
7647
7722
+
Val
TAC
[ENA]
¢þ
>WENV170633119
FUWD013391785
[FUWD] metagenome; unknown
7647
7722
+
Val
TAC
[ENA]
¢þ
>SRA1032427
SRR035088.5667
454 Sequencing (SRP001809)
42
117
+
Val
TAC
[SRA]
>SRA1049081
SRR035095.16365
454 Sequencing (SRP001816)
344
269
-
Val
TAC
[SRA]
>SRA1049610
SRR035095.104604
454 Sequencing (SRP001816)
223
148
-
Val
TAC
[SRA]
Identical group No.548909 (4 seq.)
>WENV170625066
FUWD013191039
[FUWD] metagenome; unknown
913
838
-
Val
TAC
[ENA]
¢þ
>WENV170633321
FUWD013394401
[FUWD] metagenome; unknown
913
838
-
Val
TAC
[ENA]
¢þ
>SRA1033028
SRR035088.154213
454 Sequencing (SRP001809)
356
431
+
Val
TAC
[SRA]
>SRA1034124
SRR035088.498766
454 Sequencing (SRP001809)
87
12
-
Val
TAC
[SRA]
Identical group No.548924 (4 seq.)
>WENV170625545
FUWD013200122
[FUWD] metagenome; unknown
2209
2284
+
Val
TAC
[ENA]
¢þ
>WENV170633772
FUWD013402440
[FUWD] metagenome; unknown
2209
2284
+
Val
TAC
[ENA]
¢þ
>SRA1033712
SRR035088.333889
454 Sequencing (SRP001809)
165
240
+
Val
TAC
[SRA]
>SRA1033805
SRR035088.360573
454 Sequencing (SRP001809)
60
135
+
Val
TAC
[SRA]
Identical group No.612329 (1 seq.)
>SRA1032444
SRR035088.11208
454 Sequencing (SRP001809)
308
383
+
Val
TAC
[SRA]
Identical group No.612335 (2 seq.)
>SRA1032688
SRR035088.79873
454 Sequencing (SRP001809)
481
407
-
Val
TAC
[SRA]
>SRA1033137
SRR035088.181515
454 Sequencing (SRP001809)
377
303
-
Val
TAC
[SRA]
Identical group No.612395 (1 seq.)
>SRA1033845
SRR035088.375556
454 Sequencing (SRP001809)
456
384
-
Val
TAC
[SRA]
Identical group No.612398 (1 seq.)
>SRA1033898
SRR035088.398509
454 Sequencing (SRP001809)
205
133
-
Val
TAC
[SRA]
Identical group No.654445 (14 seq.)
>WENV170617403
FUWD012925110
[FUWD] metagenome; unknown
215
289
+
Val
TAC
[ENA]
¢þ
>WENV170620115
FUWD013026149
[FUWD] metagenome; unknown
314
388
+
Val
TAC
[ENA]
¢þ
>WENV170625134
FUWD013192197
[FUWD] metagenome; unknown
5796
5870
+
Val
TAC
[ENA]
¢þ
>WENV170628245
FUWD013244005
[FUWD] metagenome; unknown
314
388
+
Val
TAC
[ENA]
¢þ
>WENV170633391
FUWD013395393
[FUWD] metagenome; unknown
5796
5870
+
Val
TAC
[ENA]
¢þ
>SRA1032466
SRR035088.18334
454 Sequencing (SRP001809)
115
41
-
Val
TAC
[SRA]
>SRA1032757
SRR035088.96577
454 Sequencing (SRP001809)
363
437
+
Val
TAC
[SRA]
>SRA1032962
SRR035088.140928
454 Sequencing (SRP001809)
363
437
+
Val
TAC
[SRA]
>SRA1032991
SRR035088.145948
454 Sequencing (SRP001809)
31
105
+
Val
TAC
[SRA]
>SRA1034058
SRR035088.470975
454 Sequencing (SRP001809)
133
59
-
Val
TAC
[SRA]
>SRA1034128
SRR035088.499737
454 Sequencing (SRP001809)
123
197
+
Val
TAC
[SRA]
>SRA1034400
SRR035089.82224
454 Sequencing (SRP001810)
314
388
+
Val
TAC
[SRA]
>SRA1034844
SRR035089.184533
454 Sequencing (SRP001810)
294
368
+
Val
TAC
[SRA]
>SRA1050028
SRR035095.178434
454 Sequencing (SRP001816)
225
299
+
Val
TAC
[SRA]
Identical group No.654602 (10 seq.)
>WENV170624225
FUWD013178071
[FUWD] metagenome; unknown
2951
2880
-
Val
TAC
[ENA]
¢þ
>WENV170632507
FUWD013383688
[FUWD] metagenome; unknown
2951
2880
-
Val
TAC
[ENA]
¢þ
>SRA1033004
SRR035088.150470
454 Sequencing (SRP001809)
170
241
+
Val
TAC
[SRA]
>SRA1033661
SRR035088.317135
454 Sequencing (SRP001809)
207
136
-
Val
TAC
[SRA]
>SRA1036194
SRR035089.467073
454 Sequencing (SRP001810)
245
174
-
Val
TAC
[SRA]
>SRA1040519
SRR035091.109421
454 Sequencing (SRP001812)
126
197
+
Val
TAC
[SRA]
>SRA1041240
SRR035091.219125
454 Sequencing (SRP001812)
35
106
+
Val
TAC
[SRA]
>SRA1041407
SRR035091.237910
454 Sequencing (SRP001812)
125
196
+
Val
TAC
[SRA]
>SRA1043835
SRR035092.183715
454 Sequencing (SRP001813)
322
393
+
Val
TAC
[SRA]
>SRA1043980
SRR035092.205380
454 Sequencing (SRP001813)
245
174
-
Val
TAC
[SRA]
Identical group No.711061 (5 seq.)
>WENV170612164
FUWD012518670
[FUWD] metagenome; unknown
128
202
+
Val
TAC
[ENA]
¢þ
>SRA1032740
SRR035088.92490
454 Sequencing (SRP001809)
128
202
+
Val
TAC
[SRA]
>SRA1033744
SRR035088.343517
454 Sequencing (SRP001809)
130
204
+
Val
TAC
[SRA]
>SRA1039429
SRR035090.489536
454 Sequencing (SRP001811)
206
132
-
Val
TAC
[SRA]
>SRA1039577
SRR035090.519410
454 Sequencing (SRP001811)
205
131
-
Val
TAC
[SRA]
Identical group No.751607 (1 seq.)
>SRA1033029
SRR035088.154587
454 Sequencing (SRP001809)
186
112
-
Val
TAC
[SRA]
Identical group No.751634 (1 seq.)
>SRA1033946
SRR035088.419351
454 Sequencing (SRP001809)
56
130
+
Val
TAC
[SRA]
Identical group No.788140 (4 seq.)
>WENV170605108
FUWD010449904
[FUWD] metagenome; unknown
256
328
+
Val
TAC
[ENA]
¢þ
>SRA1030958
SRR035087.354586
454 Sequencing (SRP001808)
122
194
+
Val
TAC
[SRA]
>SRA1031749
SRR035087.481362
454 Sequencing (SRP001808)
122
194
+
Val
TAC
[SRA]
>SRA1032937
SRR035088.134380
454 Sequencing (SRP001809)
123
51
-
Val
TAC
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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