tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001809)

Anticodon = TCG

HIT: 15 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.171721 (1 seq.)
>SRA1033766 SRR035088.348381 454 Sequencing (SRP001809) 247 170 - Arg TCG [SRA]
Identical group No.171724 (1 seq.)
>SRA1033930 SRR035088.412517 454 Sequencing (SRP001809) 247 324 + Arg TCG [SRA]
Identical group No.177303 (22 seq.)
>W131157527 AQSK01000112 Unclassified Cloacimonetes bacterium SCGC AAA252-E13 KSB1 bacterium SCGC AAA252-E13 [AQSK] 10829 10753 - Arg TCG [ENA] ¡û
>W131157610 AQSM01000086 Unclassified Cloacimonetes bacterium SCGC AAA252-N14 KSB1 bacterium SCGC AAA252-N14 [AQSM] 10216 10140 - Arg TCG [ENA] ¡û
>W131192147 ASKO01000053 Unclassified Cloacimonetes bacterium SCGC AAA252-M08 KSB1 bacterium SCGC AAA252-M08 [ASKO] 263 339 + Arg TCG [ENA] ¡û
>W131192157 ASKP01000060 Unclassified Cloacimonetes bacterium SCGC AAA252-L05 KSB1 bacterium SCGC AAA252-L05 [ASKP] 4346 4270 - Arg TCG [ENA] ¡û
>W131192185 ASKQ01000098 Unclassified Cloacimonetes bacterium SCGC AAA252-O17 KSB1 bacterium SCGC AAA252-O17 [ASKQ] 1297 1373 + Arg TCG [ENA] ¡û
>W131192965 ASNI01000001 Unclassified Cloacimonetes bacterium SCGC AAA252-N17 KSB1 bacterium SCGC AAA252-N17 [ASNI] 10392 10316 - Arg TCG [ENA] ¡û
>W131193153 ASNQ01000061 Unclassified Cloacimonetes bacterium SCGC AAA252-K16 KSB1 bacterium SCGC AAA252-K16 [ASNQ] 256 332 + Arg TCG [ENA] ¡û
>W131193158 ASNR01000019 Unclassified Cloacimonetes bacterium SCGC AAA252-L13 KSB1 bacterium SCGC AAA252-L13 [ASNR] 5724 5800 + Arg TCG [ENA] ¡û
>W131193201 ASNT01000040 Unclassified Cloacimonetes bacterium SCGC AAA252-P10 KSB1 bacterium SCGC AAA252-P10 [ASNT] 10384 10308 - Arg TCG [ENA] ¡û
>W141139682 AWNX01000021 Unclassified Cloacimonetes bacterium JGI OTU-1 [AWNX] 10640 10564 - Arg TCG [ENA] ¡û
>WENV170624764 FUWD013186367 [FUWD] metagenome; unknown 1206 1130 - Arg TCG [ENA] ¢þ
>WENV170633040 FUWD013390449 [FUWD] metagenome; unknown 1206 1130 - Arg TCG [ENA] ¢þ
>SRA1025550 SRR035085.37500 454 Sequencing (SRP001806) 401 325 - Arg TCG [SRA]
>SRA1025886 SRR035085.102782 454 Sequencing (SRP001806) 402 326 - Arg TCG [SRA]
>SRA1025972 SRR035085.119514 454 Sequencing (SRP001806) 403 327 - Arg TCG [SRA]
>SRA1031126 SRR035087.377529 454 Sequencing (SRP001808) 274 198 - Arg TCG [SRA]
>SRA1032700 SRR035088.82055 454 Sequencing (SRP001809) 91 15 - Arg TCG [SRA]
>SRA1033095 SRR035088.172122 454 Sequencing (SRP001809) 72 148 + Arg TCG [SRA]
>SRA1033378 SRR035088.239777 454 Sequencing (SRP001809) 149 73 - Arg TCG [SRA]
>SRA1034151 SRR035088.510328 454 Sequencing (SRP001809) 104 180 + Arg TCG [SRA]
>SRA1048754 SRR035094.241714 454 Sequencing (SRP001815) 32 108 + Arg TCG [SRA]
>SRA1048869 SRR035094.267796 454 Sequencing (SRP001815) 32 108 + Arg TCG [SRA]
Identical group No.177549 (3 seq.)
>WENV170608017 FUWD010883431 [FUWD] metagenome; unknown 293 217 - Arg TCG [ENA] ¢þ
>SRA1034096 SRR035088.485114 454 Sequencing (SRP001809) 255 179 - Arg TCG [SRA]
>SRA1034316 SRR035089.55033 454 Sequencing (SRP001810) 93 17 - Arg TCG [SRA]
Identical group No.177721 (30 seq.)
>W1711584327 MNYJ01000022 Thermodesulfobacteriota Desulfobacteraceae bacterium CG2_30_51_40 [MNYJ] 59482 59406 - Arg TCG [ENA] ¡û
>W131235311 AULM01000003 Thermodesulfobacteriota Desulfatiglans anilini DSM 4660 [AULM] 154296 154372 + Arg TCG [ENA] ¡û
>WENV180345965 OBLN01015377 [OBLN] sediment metagenome; sediment 613 689 + Arg TCG [ENA] ¢þ
>WENV183514143 OMKS01012446 [OMKS] sediment metagenome; hot spring sediment 2691 2767 + Arg TCG [ENA] ¢þ
>WENV183515301 OMKS01056163 [OMKS] sediment metagenome; hot spring sediment 731 805 + Arg TCG [ENA] ¢þ
>WENV183667469 ORJL010651111 [ORJL] groundwater metagenome; groundwater 677 601 - Arg TCG [ENA] ¢þ
>WENV170571953 FLOH01000415 [FLOH] marine metagenome; water 80987 81063 + Arg TCG [ENA] ¢þ
>WENV170572963 FLOH01001728 [FLOH] marine metagenome; water 1989 1913 - Arg TCG [ENA] ¢þ
>WENV170621717 FUWD013070555 [FUWD] metagenome; unknown 386 310 - Arg TCG [ENA] ¢þ
>WENV170625366 FUWD013196638 [FUWD] metagenome; unknown 1842 1766 - Arg TCG [ENA] ¢þ
>WENV170625368 FUWD013196639 [FUWD] metagenome; unknown 145 69 - Arg TCG [ENA] ¢þ
>WENV170629904 FUWD013286248 [FUWD] metagenome; unknown 386 310 - Arg TCG [ENA] ¢þ
>WENV170633606 FUWD013399285 [FUWD] metagenome; unknown 1842 1766 - Arg TCG [ENA] ¢þ
>WENV170633608 FUWD013399286 [FUWD] metagenome; unknown 145 69 - Arg TCG [ENA] ¢þ
>WENV170692681 LGOV01021295 [LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge 1609 1685 + Arg TCG [ENA] ¢þ
>WENV170693470 LGVC01012761 [LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive 1495 1571 + Arg TCG [ENA] ¢þ
>WENV170693948 LGVD01001218 [LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at 139 215 + Arg TCG [ENA] ¢þ
>WENV170695079 LGVE01042755 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 313 389 + Arg TCG [ENA] ¢þ
>WENV170696522 LGVF01024378 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 826 750 - Arg TCG [ENA] ¢þ
>SRA1031726 SRR035087.477717 454 Sequencing (SRP001808) 276 352 + Arg TCG [SRA]
>SRA1033161 SRR035088.187446 454 Sequencing (SRP001809) 280 204 - Arg TCG [SRA]
>SRA1033480 SRR035088.269440 454 Sequencing (SRP001809) 101 177 + Arg TCG [SRA]
>SRA1033495 SRR035088.271988 454 Sequencing (SRP001809) 399 323 - Arg TCG [SRA]
>SRA1033594 SRR035088.296744 454 Sequencing (SRP001809) 136 60 - Arg TCG [SRA]
>SRA1034136 SRR035088.504591 454 Sequencing (SRP001809) 200 124 - Arg TCG [SRA]
>SRA1035369 SRR035089.292193 454 Sequencing (SRP001810) 228 304 + Arg TCG [SRA]
>SRA1049929 SRR035095.162444 454 Sequencing (SRP001816) 490 414 - Arg TCG [SRA]
>SRA1050237 SRR035095.218579 454 Sequencing (SRP001816) 154 230 + Arg TCG [SRA]
>W10123461 ADZZ01000709 Unclassified delta proteobacterium NaphS2 [ADZZ] 134 210 + Arg TCG [ENA] ¡û
>W11130259 ADZZ01000709 Unclassified delta proteobacterium NaphS2 [ADZZ] 134 210 + Arg TCG [ENA] ¡û
Identical group No.177759 (9 seq.)
>WENV183515904 OMKS01106521 [OMKS] sediment metagenome; hot spring sediment 127 51 - Arg TCG [ENA] ¢þ
>WENV170608061 FUWD010888068 [FUWD] metagenome; unknown 282 358 + Arg TCG [ENA] ¢þ
>SRA1032461 SRR035088.17532 454 Sequencing (SRP001809) 220 144 - Arg TCG [SRA]
>SRA1032952 SRR035088.138779 454 Sequencing (SRP001809) 221 145 - Arg TCG [SRA]
>SRA1033393 SRR035088.244278 454 Sequencing (SRP001809) 128 52 - Arg TCG [SRA]
>SRA1035642 SRR035089.347394 454 Sequencing (SRP001810) 15 91 + Arg TCG [SRA]
>SRA1035919 SRR035089.403774 454 Sequencing (SRP001810) 306 382 + Arg TCG [SRA]
>SRA1048332 SRR035094.149221 454 Sequencing (SRP001815) 292 216 - Arg TCG [SRA]
>SRA1049794 SRR035095.139692 454 Sequencing (SRP001816) 432 356 - Arg TCG [SRA]
Identical group No.196461 (5 seq.)
>WENV170621823 FUWD013074655 [FUWD] metagenome; unknown 425 501 + Arg TCG [ENA] ¢þ
>WENV170630024 FUWD013290206 [FUWD] metagenome; unknown 425 501 + Arg TCG [ENA] ¢þ
>SRA1031679 SRR035087.470085 454 Sequencing (SRP001808) 104 180 + Arg TCG [SRA]
>SRA1033270 SRR035088.211022 454 Sequencing (SRP001809) 86 10 - Arg TCG [SRA]
>SRA1037725 SRR035090.180704 454 Sequencing (SRP001811) 164 240 + Arg TCG [SRA]
Identical group No.209096 (10 seq.)
>WENV170620212 FUWD013027450 [FUWD] metagenome; unknown 7278 7202 - Arg TCG [ENA] ¢þ
>WENV170628348 FUWD013245228 [FUWD] metagenome; unknown 7278 7202 - Arg TCG [ENA] ¢þ
>SRA1032630 SRR035088.66998 454 Sequencing (SRP001809) 192 116 - Arg TCG [SRA]
>SRA1033579 SRR035088.293243 454 Sequencing (SRP001809) 183 107 - Arg TCG [SRA]
>SRA1040507 SRR035091.107240 454 Sequencing (SRP001812) 307 383 + Arg TCG [SRA]
>SRA1040583 SRR035091.118691 454 Sequencing (SRP001812) 28 104 + Arg TCG [SRA]
>SRA1040670 SRR035091.130488 454 Sequencing (SRP001812) 253 177 - Arg TCG [SRA]
>SRA1041637 SRR035091.272435 454 Sequencing (SRP001812) 219 143 - Arg TCG [SRA]
>SRA1050365 SRR035095.244956 454 Sequencing (SRP001816) 99 175 + Arg TCG [SRA]
>SRA1054808 SRR035099.218877 454 Sequencing (SRP001820) 493 417 - Arg TCG [SRA]
Identical group No.230094 (3 seq.)
>WENV170603296 FUWD010299431 [FUWD] metagenome; unknown 3 79 + Arg TCG [ENA] ¢þ
>SRA1020392 SRR035083.106807 454 Sequencing (SRP001804) 168 244 + Arg TCG [SRA]
>SRA1033391 SRR035088.244145 454 Sequencing (SRP001809) 366 290 - Arg TCG [SRA]
Identical group No.230097 (6 seq.)
>WENV170603351 FUWD010304657 [FUWD] metagenome; unknown 724 648 - Arg TCG [ENA] ¢þ
>SRA1032945 SRR035088.137027 454 Sequencing (SRP001809) 283 207 - Arg TCG [SRA]
>SRA1037149 SRR035090.82107 454 Sequencing (SRP001811) 300 376 + Arg TCG [SRA]
>SRA1037761 SRR035090.189907 454 Sequencing (SRP001811) 300 376 + Arg TCG [SRA]
>SRA1038692 SRR035090.350491 454 Sequencing (SRP001811) 15 91 + Arg TCG [SRA]
>C131010897 CP003985 Thermodesulfobacteriota Desulfocapsa sulfexigens DSM 10523 [CP003985] 2669081 2669005 - Arg TCG [Ensembl] ¡û
Identical group No.230794 (5 seq.)
>WENV170622553 FUWD013109322 [FUWD] metagenome; unknown 861 785 - Arg TCG [ENA] ¢þ
>WENV170630769 FUWD013323489 [FUWD] metagenome; unknown 861 785 - Arg TCG [ENA] ¢þ
>SRA1032811 SRR035088.107783 454 Sequencing (SRP001809) 73 -1 - Arg TCG [SRA]
>SRA1033667 SRR035088.318462 454 Sequencing (SRP001809) 321 245 - Arg TCG [SRA]
>SRA1033721 SRR035088.335510 454 Sequencing (SRP001809) 78 2 - Arg TCG [SRA]
Identical group No.230893 (5 seq.)
>WENV170625997 FUWD013211219 [FUWD] metagenome; unknown 1268 1342 + Arg TCG [ENA] ¢þ
>WENV170631942 FUWD013372929 [FUWD] metagenome; unknown 5257 5183 - Arg TCG [ENA] ¢þ
>SRA1033857 SRR035088.379903 454 Sequencing (SRP001809) 256 330 + Arg TCG [SRA]
>SRA1042267 SRR035091.364676 454 Sequencing (SRP001812) 229 303 + Arg TCG [SRA]
>SRA1049381 SRR035095.67188 454 Sequencing (SRP001816) 208 134 - Arg TCG [SRA]
Identical group No.261302 (1 seq.)
>SRA1033272 SRR035088.211714 454 Sequencing (SRP001809) 136 210 + Arg TCG [SRA]
Identical group No.261320 (1 seq.)
>SRA1033665 SRR035088.318357 454 Sequencing (SRP001809) 214 138 - Arg TCG [SRA]
Identical group No.463311 (1 seq.)
>SRA1033061 SRR035088.162953 454 Sequencing (SRP001809) 228 154 - Arg TCG [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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