tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001819)

Anticodon = TCG

HIT: 11 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.358581 (3 seq.)
>WENV170617811 FUWD012937570 [FUWD] metagenome; unknown 360 436 + Arg TCG [ENA] ¢þ
>SRA1051482 SRR035098.12934 454 Sequencing (SRP001819) 335 259 - Arg TCG [SRA]
>SRA1051531 SRR035098.23071 454 Sequencing (SRP001819) 335 259 - Arg TCG [SRA]
Identical group No.422592 (1 seq.)
>SRA1052313 SRR035098.179770 454 Sequencing (SRP001819) 19 93 + Arg TCG [SRA]
Identical group No.422626 (1 seq.)
>SRA1053562 SRR035098.437505 454 Sequencing (SRP001819) 122 198 + Arg TCG [SRA]
Identical group No.548854 (4 seq.)
>WENV170623492 FUWD013153375 [FUWD] metagenome; unknown 334 409 + Arg TCG [ENA] ¢þ
>WENV170631757 FUWD013364228 [FUWD] metagenome; unknown 334 409 + Arg TCG [ENA] ¢þ
>SRA1053524 SRR035098.426058 454 Sequencing (SRP001819) 66 141 + Arg TCG [SRA]
>SRA1053868 SRR035098.521439 454 Sequencing (SRP001819) 67 142 + Arg TCG [SRA]
Identical group No.548910 (4 seq.)
>WENV170625109 FUWD013191671 [FUWD] metagenome; unknown 3457 3382 - Arg TCG [ENA] ¢þ
>WENV170633366 FUWD013394948 [FUWD] metagenome; unknown 3457 3382 - Arg TCG [ENA] ¢þ
>SRA1052184 SRR035098.157368 454 Sequencing (SRP001819) 312 387 + Arg TCG [SRA]
>SRA1052424 SRR035098.200200 454 Sequencing (SRP001819) 62 137 + Arg TCG [SRA]
Identical group No.620516 (1 seq.)
>SRA1053236 SRR035098.366304 454 Sequencing (SRP001819) 344 268 - Arg TCG [SRA]
Identical group No.620521 (1 seq.)
>SRA1053441 SRR035098.405475 454 Sequencing (SRP001819) 95 22 - Arg TCG [SRA]
Identical group No.672677 (10 seq.)
>WENV183624097 OOGB01025480 [OOGB] marine metagenome; sea ice 448 374 - Arg TCG [ENA] ¢þ
>WENV170326084 CEST01087092 [CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1844 1770 - Arg TCG [ENA] ¢þ
>WENV170627002 FUWD013230692 [FUWD] metagenome; unknown 10724 10650 - Arg TCG [ENA] ¢þ
>WENV170628933 FUWD013256697 [FUWD] metagenome; unknown 309371 309297 - Arg TCG [ENA] ¢þ
>WENV170919159 MDTF01006558 [MDTF] marine metagenome; seawater 9345 9271 - Arg TCG [ENA] ¢þ
>WENV170953933 MEHZ011679565 [MEHZ] marine metagenome; marine surface water 4566 4492 - Arg TCG [ENA] ¢þ
>SRA1023998 SRR035084.226242 454 Sequencing (SRP001805) 460 386 - Arg TCG [SRA]
>SRA1045271 SRR035093.48639 454 Sequencing (SRP001814) 240 314 + Arg TCG [SRA]
>SRA1052056 SRR035098.132195 454 Sequencing (SRP001819) 263 337 + Arg TCG [SRA]
>SRA1052745 SRR035098.265324 454 Sequencing (SRP001819) 266 340 + Arg TCG [SRA]
Identical group No.672753 (4 seq.)
>WENV170626800 FUWD013229601 [FUWD] metagenome; unknown 1922 1850 - Arg TCG [ENA] ¢þ
>WENV170631098 FUWD013338399 [FUWD] metagenome; unknown 16665 16593 - Arg TCG [ENA] ¢þ
>SRA1046816 SRR035093.392230 454 Sequencing (SRP001814) 309 237 - Arg TCG [SRA]
>SRA1053211 SRR035098.362612 454 Sequencing (SRP001819) 94 22 - Arg TCG [SRA]
Identical group No.710462 (3 seq.)
>WENV170599175 FUWD010065754 [FUWD] metagenome; unknown 669 595 - Arg TCG [ENA] ¢þ
>SRA1050931 SRR035096.54062 454 Sequencing (SRP001817) 516 442 - Arg TCG [SRA]
>SRA1053546 SRR035098.434226 454 Sequencing (SRP001819) 121 195 + Arg TCG [SRA]
Identical group No.711144 (2 seq.)
>WENV170612908 FUWD012739061 [FUWD] metagenome; unknown 215 289 + Arg TCG [ENA] ¢þ
>SRA1051762 SRR035098.72723 454 Sequencing (SRP001819) 215 289 + Arg TCG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK