tRNA genes clustered and arranged according to each identical group

Acidithiobacillia

Anticodon = GAG

HIT: 7 Group(s).

Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.100439 (11 seq.)
>W1711220190	LXQG01000054	Acidithiobacillia	Acidithiobacillus caldus [LXQG]	14291	14376	+	Leu	GAG	[ENA]	○
>W1711292947	LZYE01000004	Acidithiobacillia	Acidithiobacillus caldus [LZYE]	51545	51460	-	Leu	GAG	[ENA]	○
>W1711292991	LZYF01000005	Acidithiobacillia	Acidithiobacillus caldus [LZYF]	23913	23828	-	Leu	GAG	[ENA]	○
>W1711293048	LZYG01000076	Acidithiobacillia	Acidithiobacillus caldus [LZYG]	14457	14542	+	Leu	GAG	[ENA]	○
>W1711293106	LZYH01000733	Acidithiobacillia	Acidithiobacillus caldus [LZYH]	6073	5988	-	Leu	GAG	[ENA]	○
>WENV181406497	OGCG01000342	[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA		15580	15495	-	Leu	GAG	[ENA]	◯
>C181130814	CP026328	Acidithiobacillia	Acidithiobacillus caldus MTH-04 [CP026328]	2405793	2405878	+	Leu	GAG	-	○
>W09134897	ACVD01000051	Acidithiobacillia	Acidithiobacillus caldus ATCC 51756 [ACVD]	41061	41146	+	Leu	GAG	[ENA]	○
>C151007954	CP005986	Acidithiobacillia	Acidithiobacillus caldus ATCC 51756 [CP005986]	2438468	2438553	+	Leu	GAG	[Ensembl]	○
>C11100497	CP002573	Acidithiobacillia	Acidithiobacillus caldus SM-1 [CP002573]	2594856	2594941	+	Leu	GAG	[Ensembl]	○
>W1611004662	LXQG01000054	Acidithiobacillia	Acidithiobacillus caldus [LXQG]	14291	14376	+	Leu	GAG	[ENA]	○
Identical group No.119252 (37 seq.)
>W1710777660	LJBT01000093	Acidithiobacillia	Acidithiobacillus ferrooxidans [LJBT]	46105	46189	+	Leu	GAG	[ENA]	○
>W1711010467	LQRJ01000035	Acidithiobacillia	Acidithiobacillus ferrooxidans [LQRJ]	76123	76207	+	Leu	GAG	[ENA]	○
>W1711168351	LVXZ01000110	Acidithiobacillia	Acidithiobacillus ferrooxidans [LVXZ]	11473	11557	+	Leu	GAG	[ENA]	○
>W1711169882	LVZL01000067	Acidithiobacillia	Acidithiobacillus ferrivorans [LVZL]	69014	68930	-	Leu	GAG	[ENA]	○
>W1711190237	LWRY01000028	Acidithiobacillia	Acidithiobacillus thiooxidans [LWRY]	23739	23655	-	Leu	GAG	[ENA]	○
>W1711190375	LWRZ01000225	Acidithiobacillia	Acidithiobacillus thiooxidans [LWRZ]	23721	23637	-	Leu	GAG	[ENA]	○
>W1711190435	LWSA01000151	Acidithiobacillia	Acidithiobacillus thiooxidans [LWSA]	23735	23651	-	Leu	GAG	[ENA]	○
>W1711190482	LWSB01000013	Acidithiobacillia	Acidithiobacillus thiooxidans [LWSB]	59948	60032	+	Leu	GAG	[ENA]	○
>W1711190636	LWSC01000277	Acidithiobacillia	Acidithiobacillus thiooxidans [LWSC]	29743	29827	+	Leu	GAG	[ENA]	○
>W1711190701	LWSD01000189	Acidithiobacillia	Acidithiobacillus thiooxidans [LWSD]	23704	23620	-	Leu	GAG	[ENA]	○
>W1711293162	LZYI01000062	Acidithiobacillia	Acidithiobacillus thiooxidans [LZYI]	25903	25819	-	Leu	GAG	[ENA]	○
>W1711312157	MASQ01000076	Acidithiobacillia	Acidithiobacillus ferrivorans [MASQ]	12848	12932	+	Leu	GAG	[ENA]	○
>W1711585803	MOAD01000001	Acidithiobacillia	Acidithiobacillus albertensis [MOAD]	510685	510769	+	Leu	GAG	[ENA]	○
>W141206774	AZMO01000019	Acidithiobacillia	Acidithiobacillus thiooxidans A01 [AZMO]	59845	59929	+	Leu	GAG	[ENA]	○
>W141262895	CCCS020000007	Acidithiobacillia	Acidithiobacillus ferrivorans [CCCS]	18393	18477	+	Leu	GAG	[ENA]	○
>C08000423	CP001132	Acidithiobacillia	Acidithiobacillus ferrooxidans ATCC 53993 [CP001132]	2231756	2231675	-	Leu	GAG	[Ensembl]	○
>WENV170008357	AOMP01000259	[AOMP] mine drainage metagenome; low temperature acidic, metal-polluted mine stream		4526	4442	-	Leu	GAG	[ENA]	◯
>WENV170008632	AOMQ01010417	[AOMQ] mine drainage metagenome; low temperature acidic, metal-polluted mine stream		457	373	-	Leu	GAG	[ENA]	◯
>C191005137	AP018795	Acidithiobacillia	Acidithiobacillus ferridurans JCM 18981 [AP018795]	581808	581724	-	Leu	GAG	-	○
>W141695597	JMEB01000210	Acidithiobacillia	Acidithiobacillus thiooxidans [JMEB]	32606	32522	-	Leu	GAG	[ENA]	○
>W141738846	JNNH01001011	Acidithiobacillia	Acidithiobacillus ferrooxidans ferriphilum [JNNH]	1736	1652	-	Leu	GAG	[ENA]	○
>C09100376	CP001219	Acidithiobacillia	Acidithiobacillus ferrooxidans ATCC 23270 [CP001219]	2337055	2336971	-	Leu	GAG	[Ensembl]	○
>W1910831822	MXAV01000006	Acidithiobacillia	Acidithiobacillus marinus SH [MXAV]	12421	12505	+	Leu	GAG	[ENA]	○
>W1810257117	PQJK01000002	Acidithiobacillia	Acidithiobacillus ferridurans IO-2C [PQJK]	212706	212790	+	Leu	GAG	[ENA]	○
>W1810679294	QKQP01000005	Acidithiobacillia	Acidithiobacillus ferrooxidans CCM 4253 [QKQP]	161228	161144	-	Leu	GAG	[ENA]	○
>W10127986	AEFB01000854	Acidithiobacillia	Acidithiobacillus sp. GGI-221 [AEFB]	2854	2938	+	Leu	GAG	[ENA]	○
>C11100740	CP002985	Acidithiobacillia	Acidithiobacillus ferrivorans SS3 [CP002985]	2540799	2540715	-	Leu	GAG	[Ensembl]	○
>W11135531	AEFB01000854	Acidithiobacillia	Acidithiobacillus sp. GGI-221 [AEFB]	2854	2938	+	Leu	GAG	[ENA]	○
>W11164276	AFJD01000008	Acidithiobacillia	Acidithiobacillus ferrivorans SS3 [AFJD]	63245	63329	+	Leu	GAG	[ENA]	○
>W11168547	AFOH01000122	Acidithiobacillia	Acidithiobacillus thiooxidans ATCC 19377 [AFOH]	26878	26962	+	Leu	GAG	[ENA]	○
>W1610627904	LIEB01000024	Nitrospirota	Leptospirillum sp. YQP-1 [LIEB]	26920	26836	-	Leu	GAG	[ENA]	○
>W1610641846	LJBT01000093	Acidithiobacillia	Acidithiobacillus ferrooxidans [LJBT]	46105	46189	+	Leu	GAG	[ENA]	○
>W1610858987	LQRJ01000035	Acidithiobacillia	Acidithiobacillus ferrooxidans [LQRJ]	76123	76207	+	Leu	GAG	[ENA]	○
>W1610978266	LVXZ01000110	Acidithiobacillia	Acidithiobacillus ferrooxidans [LVXZ]	11473	11557	+	Leu	GAG	[ENA]	○
>W1611057358	MASQ01000076	Acidithiobacillia	Acidithiobacillus ferrivorans [MASQ]	12848	12932	+	Leu	GAG	[ENA]	○
>W1710743676	LGYM01000013	Acidithiobacillia	Acidithiobacillus thiooxidans [LGYM]	91414	91498	+	Leu	GAG	[ENA]	○
>W1710759031	LIEB01000024	Nitrospirota	Leptospirillum sp. YQP-1 [LIEB]	26920	26836	-	Leu	GAG	[ENA]	○
Identical group No.126134 (9 seq.)
>W1710798658	LJTU01000001	Acidithiobacillia	Acidithiobacillales bacterium SG8_45 [LJTU]	71263	71347	+	Leu	GAG	[ENA]	○
>W1711256799	LYSX01000017	Gammaproteobacteria	Ectothiorhodospiraceae bacterium BBD 1991-15 [LYSX]	126259	126175	-	Leu	GAG	[ENA]	○
>WENV183793194	PQDT01023606	[PQDT] marine sediment metagenome; marine sediment		1065	981	-	Leu	GAG	[ENA]	◯
>WENV183795744	PVBE010195554	[PVBE] marine metagenome; water		616	532	-	Leu	GAG	[ENA]	◯
>WENV170271298	CERI01283793	[CERI] marine metagenome genome assembly TARA_067_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)		6108	6024	-	Leu	GAG	[ENA]	◯
>WENV170315857	CESO01305450	[CESO] marine metagenome genome assembly TARA_093_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)		399	315	-	Leu	GAG	[ENA]	◯
>WENV170536513	CEWP01202760	[CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)		382	298	-	Leu	GAG	[ENA]	◯
>W1610662615	LJTU01000001	Acidithiobacillia	Acidithiobacillales bacterium SG8_45 [LJTU]	71263	71347	+	Leu	GAG	[ENA]	○
>W1611019824	LYSX01000017	Gammaproteobacteria	Ectothiorhodospiraceae bacterium BBD 1991-15 [LYSX]	126259	126175	-	Leu	GAG	[ENA]	○
Identical group No.129855 (10 seq.)
>W1710798655	LJTT01000112	Betaproteobacteria	Betaproteobacteria bacterium SG8_41 [LJTT]	90	6	-	Leu	GAG	[ENA]	○
>W1710799206	LJUK01000233	Acidithiobacillia	Acidithiobacillales bacterium SM23_46 [LJUK]	5666	5750	+	Leu	GAG	[ENA]	○
>W1710799751	LJVB01000011	Acidithiobacillia	Acidithiobacillales bacterium SM1_46 [LJVB]	40634	40718	+	Leu	GAG	[ENA]	○
>W1710799775	LJVB01000113	Acidithiobacillia	Acidithiobacillales bacterium SM1_46 [LJVB]	7835	7751	-	Leu	GAG	[ENA]	○
>W1711403033	MFSQ01000060	Unclassified	Candidatus Muproteobacteria bacterium RBG_16_62_13 [MFSQ]	5802	5886	+	Leu	GAG	[ENA]	○
>C181000795	AP014879	Gammaproteobacteria	Sulfuricaulis limicola HA5 [AP014879]	2133952	2133868	-	Leu	GAG	-	○
>W1610662612	LJTT01000112	Betaproteobacteria	Betaproteobacteria bacterium SG8_41 [LJTT]	90	6	-	Leu	GAG	[ENA]	○
>W1610663163	LJUK01000233	Acidithiobacillia	Acidithiobacillales bacterium SM23_46 [LJUK]	5666	5750	+	Leu	GAG	[ENA]	○
>W1610663708	LJVB01000011	Acidithiobacillia	Acidithiobacillales bacterium SM1_46 [LJVB]	40634	40718	+	Leu	GAG	[ENA]	○
>W1610663732	LJVB01000113	Acidithiobacillia	Acidithiobacillales bacterium SM1_46 [LJVB]	7835	7751	-	Leu	GAG	[ENA]	○
Identical group No.133575 (4 seq.)
>W1710798664	LJTU01000025	Acidithiobacillia	Acidithiobacillales bacterium SG8_45 [LJTU]	14892	14808	-	Leu	GAG	[ENA]	○
>W1710798751	LJTW01000271	Gammaproteobacteria	Thiotrichales bacterium SG8_50 [LJTW]	1984	2068	+	Leu	GAG	[ENA]	○
>W1610662621	LJTU01000025	Acidithiobacillia	Acidithiobacillales bacterium SG8_45 [LJTU]	14892	14808	-	Leu	GAG	[ENA]	○
>W1610662708	LJTW01000271	Gammaproteobacteria	Thiotrichales bacterium SG8_50 [LJTW]	1984	2068	+	Leu	GAG	[ENA]	○
Identical group No.134791 (1 seq.)
>W11300861	AEFB01000012	Acidithiobacillia	Acidithiobacillus sp. GGI-221 [AEFB]	782	698	-	Leu	GAG	[ENA]	○
Identical group No.138250 (2 seq.)
>W131231774	AUIS01000012	Acidithiobacillia	Thermithiobacillus tepidarius DSM 3134 [AUIS]	24003	23919	-	Leu	GAG	[ENA]	○
>WENV170651538	JRYF01057785	[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated		135	51	-	Leu	GAG	[ENA]	◯