tRNA genes clustered and arranged according to each identical group

Acidithiobacillia

Anticodon = GAT

HIT: 7 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.180446 (69 seq.)
>W1710777653 LJBT01000078 Acidithiobacillia Acidithiobacillus ferrooxidans [LJBT] 568 644 + Ile GAT [ENA] ¡û
>W1711010503 LQRJ01000091 Acidithiobacillia Acidithiobacillus ferrooxidans [LQRJ] 1624 1700 + Ile GAT [ENA] ¡û
>W1711168331 LVXZ01000022 Acidithiobacillia Acidithiobacillus ferrooxidans [LVXZ] 13750 13826 + Ile GAT [ENA] ¡û
>W1711169880 LVZL01000063 Acidithiobacillia Acidithiobacillus ferrivorans [LVZL] 22236 22160 - Ile GAT [ENA] ¡û
>W1711190258 LWRY01000091 Acidithiobacillia Acidithiobacillus thiooxidans [LWRY] 6509 6585 + Ile GAT [ENA] ¡û
>W1711190332 LWRZ01000040 Acidithiobacillia Acidithiobacillus thiooxidans [LWRZ] 6895 6971 + Ile GAT [ENA] ¡û
>W1711190401 LWSA01000046 Acidithiobacillia Acidithiobacillus thiooxidans [LWSA] 13655 13731 + Ile GAT [ENA] ¡û
>W1711190496 LWSB01000032 Acidithiobacillia Acidithiobacillus thiooxidans [LWSB] 62936 63012 + Ile GAT [ENA] ¡û
>W1711190613 LWSC01000090 Acidithiobacillia Acidithiobacillus thiooxidans [LWSC] 29496 29420 - Ile GAT [ENA] ¡û
>W1711190673 LWSD01000059 Acidithiobacillia Acidithiobacillus thiooxidans [LWSD] 21438 21514 + Ile GAT [ENA] ¡û
>W1711220204 LXQG01000088 Acidithiobacillia Acidithiobacillus caldus [LXQG] 1690 1766 + Ile GAT [ENA] ¡û
>W1711292955 LZYE01000052 Acidithiobacillia Acidithiobacillus caldus [LZYE] 4682 4758 + Ile GAT [ENA] ¡û
>W1711293001 LZYF01000033 Acidithiobacillia Acidithiobacillus caldus [LZYF] 4775 4851 + Ile GAT [ENA] ¡û
>W1711293043 LZYG01000056 Acidithiobacillia Acidithiobacillus caldus [LZYG] 21825 21901 + Ile GAT [ENA] ¡û
>W1711293114 LZYH01001011 Acidithiobacillia Acidithiobacillus caldus [LZYH] 1689 1765 + Ile GAT [ENA] ¡û
>W1711293166 LZYI01000072 Acidithiobacillia Acidithiobacillus thiooxidans [LZYI] 29510 29434 - Ile GAT [ENA] ¡û
>W1711312147 MASQ01000023 Acidithiobacillia Acidithiobacillus ferrivorans [MASQ] 1689 1765 + Ile GAT [ENA] ¡û
>W1711585794 MOAD01000001 Acidithiobacillia Acidithiobacillus albertensis [MOAD] 102917 102993 + Ile GAT [ENA] ¡û
>W1711585801 MOAD01000001 Acidithiobacillia Acidithiobacillus albertensis [MOAD] 417627 417703 + Ile GAT [ENA] ¡û
>W1712042557 NFLU01000038 Bacillota Flavonifractor sp. An112 [NFLU] 301 377 + Ile GAT [ENA] ¡û
>W1712042560 NFLU01000039 Bacillota Flavonifractor sp. An112 [NFLU] 303 379 + Ile GAT [ENA] ¡û
>WENV180316591 OBKI01057395 [OBKI] human gut metagenome; human gut 96 172 + Ile GAT [ENA] ¢þ
>WENV181295970 OFHJ01003042 [OFHJ] soil metagenome; Clay 3193 3269 + Ile GAT [ENA] ¢þ
>WENV181407221 OGCG01010968 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 2285 2209 - Ile GAT [ENA] ¢þ
>WENV181622567 OGMG01006355 [OGMG] metagenome; Human gut stool 2087 2011 - Ile GAT [ENA] ¢þ
>WENV181751485 OGQP01081112 [OGQP] human gut metagenome; faeces 474 398 - Ile GAT [ENA] ¢þ
>WENV181947829 OGZD01052804 [OGZD] human gut metagenome; faeces 6 82 + Ile GAT [ENA] ¢þ
>W141206790 AZMO01000052 Acidithiobacillia Acidithiobacillus thiooxidans A01 [AZMO] 27295 27371 + Ile GAT [ENA] ¡û
>WENV182210912 OHQE01003841 [OHQE] human gut metagenome; feces 2089 2013 - Ile GAT [ENA] ¢þ
>WENV182355698 OIBP01020049 [OIBP] human gut metagenome; feces 150 226 + Ile GAT [ENA] ¢þ
>WENV182499978 OITW01015014 [OITW] human gut metagenome; human gut 598 522 - Ile GAT [ENA] ¢þ
>W141262898 CCCS020000015 Acidithiobacillia Acidithiobacillus ferrivorans [CCCS] 1689 1765 + Ile GAT [ENA] ¡û
>WENV182752693 OJRB01040049 [OJRB] human gut metagenome; stool sample 582 506 - Ile GAT [ENA] ¢þ
>C08000398 CP001132 Acidithiobacillia Acidithiobacillus ferrooxidans ATCC 53993 [CP001132] 513310 513386 + Ile GAT [Ensembl] ¡û
>C08000419 CP001132 Acidithiobacillia Acidithiobacillus ferrooxidans ATCC 53993 [CP001132] 2669584 2669511 - Ile GAT [Ensembl] ¡û
>WENV170008350 AOMP01000217 [AOMP] mine drainage metagenome; low temperature acidic, metal-polluted mine stream 3556 3480 - Ile GAT [ENA] ¢þ
>WENV170008476 AOMQ01000142 [AOMQ] mine drainage metagenome; low temperature acidic, metal-polluted mine stream 3553 3477 - Ile GAT [ENA] ¢þ
>C181130818 CP026328 Acidithiobacillia Acidithiobacillus caldus MTH-04 [CP026328] 2660289 2660213 - Ile GAT - ¡û
>C181130820 CP026328 Acidithiobacillia Acidithiobacillus caldus MTH-04 [CP026328] 2655165 2655089 - Ile GAT - ¡û
>C181130824 CP026328 Acidithiobacillia Acidithiobacillus caldus MTH-04 [CP026328] 2338039 2337963 - Ile GAT - ¡û
>C181130826 CP026328 Acidithiobacillia Acidithiobacillus caldus MTH-04 [CP026328] 2331822 2331746 - Ile GAT - ¡û
>C191005107 AP018795 Acidithiobacillia Acidithiobacillus ferridurans JCM 18981 [AP018795] 1565870 1565946 + Ile GAT - ¡û
>C191005133 AP018795 Acidithiobacillia Acidithiobacillus ferridurans JCM 18981 [AP018795] 1017982 1017906 - Ile GAT - ¡û
>W141562917 JHZO01000008 Bacillota [Clostridium] viride DSM 6836 [JHZO] 1695 1771 + Ile GAT [ENA] ¡û
>W09134894 ACVD01000050 Acidithiobacillia Acidithiobacillus caldus ATCC 51756 [ACVD] 72949 72873 - Ile GAT [ENA] ¡û
>W141738842 JNNH01000936 Acidithiobacillia Acidithiobacillus ferrooxidans ferriphilum [JNNH] 1590 1666 + Ile GAT [ENA] ¡û
>C09100351 CP001219 Acidithiobacillia Acidithiobacillus ferrooxidans ATCC 23270 [CP001219] 334792 334868 + Ile GAT [Ensembl] ¡û
>C09100372 CP001219 Acidithiobacillia Acidithiobacillus ferrooxidans ATCC 23270 [CP001219] 2769745 2769669 - Ile GAT [Ensembl] ¡û
>W1910831820 MXAV01000004 Acidithiobacillia Acidithiobacillus marinus SH [MXAV] 221164 221240 + Ile GAT [ENA] ¡û
>W1810679274 QKQP01000001 Acidithiobacillia Acidithiobacillus ferrooxidans CCM 4253 [QKQP] 1233367 1233291 - Ile GAT [ENA] ¡û
>W1810679290 QKQP01000005 Acidithiobacillia Acidithiobacillus ferrooxidans CCM 4253 [QKQP] 598955 598879 - Ile GAT [ENA] ¡û
>C151007958 CP005986 Acidithiobacillia Acidithiobacillus caldus ATCC 51756 [CP005986] 2683492 2683416 - Ile GAT [Ensembl] ¡û
>C151007962 CP005986 Acidithiobacillia Acidithiobacillus caldus ATCC 51756 [CP005986] 2371932 2371856 - Ile GAT [Ensembl] ¡û
>W10128002 AEFB01001296 Acidithiobacillia Acidithiobacillus sp. GGI-221 [AEFB] 3520 3444 - Ile GAT [ENA] ¡û
>C11100501 CP002573 Acidithiobacillia Acidithiobacillus caldus SM-1 [CP002573] 2840264 2840188 - Ile GAT [Ensembl] ¡û
>C11100505 CP002573 Acidithiobacillia Acidithiobacillus caldus SM-1 [CP002573] 2528310 2528234 - Ile GAT [Ensembl] ¡û
>C11100731 CP002985 Acidithiobacillia Acidithiobacillus ferrivorans SS3 [CP002985] 3023928 3023852 - Ile GAT [Ensembl] ¡û
>C11100738 CP002985 Acidithiobacillia Acidithiobacillus ferrivorans SS3 [CP002985] 2641781 2641705 - Ile GAT [Ensembl] ¡û
>W11135547 AEFB01001296 Acidithiobacillia Acidithiobacillus sp. GGI-221 [AEFB] 3520 3444 - Ile GAT [ENA] ¡û
>W11164294 AFJD01000017 Acidithiobacillia Acidithiobacillus ferrivorans SS3 [AFJD] 25442 25518 + Ile GAT [ENA] ¡û
>W11168545 AFOH01000120 Acidithiobacillia Acidithiobacillus thiooxidans ATCC 19377 [AFOH] 2069 2145 + Ile GAT [ENA] ¡û
>W1610627912 LIEB01000036 Nitrospirota Leptospirillum sp. YQP-1 [LIEB] 1624 1700 + Ile GAT [ENA] ¡û
>W1610641839 LJBT01000078 Acidithiobacillia Acidithiobacillus ferrooxidans [LJBT] 568 644 + Ile GAT [ENA] ¡û
>W1610859023 LQRJ01000091 Acidithiobacillia Acidithiobacillus ferrooxidans [LQRJ] 1624 1700 + Ile GAT [ENA] ¡û
>W1610978246 LVXZ01000022 Acidithiobacillia Acidithiobacillus ferrooxidans [LVXZ] 13750 13826 + Ile GAT [ENA] ¡û
>W1611004676 LXQG01000088 Acidithiobacillia Acidithiobacillus caldus [LXQG] 1690 1766 + Ile GAT [ENA] ¡û
>W1611057348 MASQ01000023 Acidithiobacillia Acidithiobacillus ferrivorans [MASQ] 1689 1765 + Ile GAT [ENA] ¡û
>W1710743674 LGYM01000010 Acidithiobacillia Acidithiobacillus thiooxidans [LGYM] 3496 3420 - Ile GAT [ENA] ¡û
>W1710759039 LIEB01000036 Nitrospirota Leptospirillum sp. YQP-1 [LIEB] 1624 1700 + Ile GAT [ENA] ¡û
Identical group No.194471 (23 seq.)
>W1710799779 LJVB01000126 Acidithiobacillia Acidithiobacillales bacterium SM1_46 [LJVB] 2856 2780 - Ile GAT [ENA] ¡û
>WENV180248117 OBEQ010086088 [OBEQ] groundwater metagenome; groundwater 322 398 + Ile GAT [ENA] ¢þ
>WENV180295540 OBIZ01144145 [OBIZ] soil metagenome; soil 160 236 + Ile GAT [ENA] ¢þ
>WENV180342327 OBLJ01005698 [OBLJ] soil metagenome; Clay 1421 1345 - Ile GAT [ENA] ¢þ
>WENV181285832 OFGU01000835 [OFGU] soil metagenome; Clay 3330 3254 - Ile GAT [ENA] ¢þ
>WENV181291774 OFHD01000717 [OFHD] soil metagenome; Clay 3380 3456 + Ile GAT [ENA] ¢þ
>WENV181412448 OGCK01000354 [OGCK] hot springs metagenome; hot spring sediment 8255 8331 + Ile GAT [ENA] ¢þ
>WENV170712057 LNFM01009490 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 3736 3660 - Ile GAT [ENA] ¢þ
>C181000969 AP014936 Gammaproteobacteria Sulfurifustis variabilis skN76 [AP014936] 3445464 3445388 - Ile GAT - ¡û
>C191186017 CP041046 Gammaproteobacteria Luteibacter pinisoli MAH-14 [CP041046] 4350686 4350610 - Ile GAT - ¡û
>C191186020 CP041046 Gammaproteobacteria Luteibacter pinisoli MAH-14 [CP041046] 3979870 3979794 - Ile GAT - ¡û
>W1810390172 PXYG01000028 Gammaproteobacteria Zobellella endophytica 59N8 [PXYG] 271 195 - Ile GAT [ENA] ¡û
>ENV09003561 ADGO01089406 Compost metagenome contig00001 326 402 + Ile GAT [ENA] ¡û
>C161041419 CP012373 Gammaproteobacteria Beggiatoa leptomitoformis D-402 [CP012373] 3678813 3678889 + Ile GAT [Ensembl] ¡û
>C161041434 CP012373 Gammaproteobacteria Beggiatoa leptomitoformis D-402 [CP012373] 3009180 3009104 - Ile GAT [Ensembl] ¡û
>W1610616777 LGRQ01000052 Gammaproteobacteria Luteibacter rhizovicinus [LGRQ] 3943 4019 + Ile GAT [ENA] ¡û
>W1610663736 LJVB01000126 Acidithiobacillia Acidithiobacillales bacterium SM1_46 [LJVB] 2856 2780 - Ile GAT [ENA] ¡û
>W1710515295 FNBR01000012 Gammaproteobacteria Dyella sp. 333MFSha [FNBR] 2753 2677 - Ile GAT [ENA] ¡û
>W1710545827 FOBU01000008 Gammaproteobacteria Luteibacter sp. UNCMF331Sha3.1 [FOBU] 3498 3422 - Ile GAT [ENA] ¡û
>W1710548728 FODZ01000015 Gammaproteobacteria Luteibacter sp. UNC138MFCol5.1 [FODZ] 1598 1674 + Ile GAT [ENA] ¡û
>W1710555195 FOJE01000001 Gammaproteobacteria Luteibacter sp. 329MFSha [FOJE] 2502608 2502532 - Ile GAT [ENA] ¡û
>W1710555225 FOJE01000004 Gammaproteobacteria Luteibacter sp. 329MFSha [FOJE] 340992 341068 + Ile GAT [ENA] ¡û
>W1710742116 LGRQ01000052 Gammaproteobacteria Luteibacter rhizovicinus [LGRQ] 3943 4019 + Ile GAT [ENA] ¡û
Identical group No.269438 (2 seq.)
>W131231779 AUIS01000016 Acidithiobacillia Thermithiobacillus tepidarius DSM 3134 [AUIS] 3425 3349 - Ile GAT [ENA] ¡û
>W131231794 AUIS01000036 Acidithiobacillia Thermithiobacillus tepidarius DSM 3134 [AUIS] 3425 3349 - Ile GAT [ENA] ¡û
Identical group No.288679 (1 seq.)
>C09300008 CP001219 Acidithiobacillia Acidithiobacillus ferrooxidans ATCC 23270 [CP001219] 1028952 1028877 - Ile GAT [Ensembl] ¡û
Identical group No.319552 (7 seq.)
>W143004115 AZMO01000001 Acidithiobacillia Acidithiobacillus thiooxidans A01 [AZMO] 135008 135083 + Ile GAT [ENA] ¡û
>W143016598 JMEB01000106 Acidithiobacillia Acidithiobacillus thiooxidans [JMEB] 18034 17959 - Ile GAT [ENA] ¡û
>W1730023179 LWRZ01000058 Acidithiobacillia Acidithiobacillus thiooxidans [LWRZ] 2246 2321 + Ile GAT [ENA] ¡û
>W1730023192 LWSA01000290 Acidithiobacillia Acidithiobacillus thiooxidans [LWSA] 10928 10853 - Ile GAT [ENA] ¡û
>W1730023198 LWSB01000089 Acidithiobacillia Acidithiobacillus thiooxidans [LWSB] 5719 5794 + Ile GAT [ENA] ¡û
>W1730023221 LWSD01000267 Acidithiobacillia Acidithiobacillus thiooxidans [LWSD] 3267 3342 + Ile GAT [ENA] ¡û
>W1730025104 LZYI01000014 Acidithiobacillia Acidithiobacillus thiooxidans [LZYI] 10946 10871 - Ile GAT [ENA] ¡û
Identical group No.422347 (9 seq.)
>W143004122 AZMO01000080 Acidithiobacillia Acidithiobacillus thiooxidans A01 [AZMO] 6596 6522 - Ile GAT [ENA] ¡û
>W1730013215 LGYM01000007 Acidithiobacillia Acidithiobacillus thiooxidans [LGYM] 23810 23884 + Ile GAT [ENA] ¡û
>W1730023172 LWRY01000053 Acidithiobacillia Acidithiobacillus thiooxidans [LWRY] 14409 14335 - Ile GAT [ENA] ¡û
>W1730023177 LWRZ01000029 Acidithiobacillia Acidithiobacillus thiooxidans [LWRZ] 21271 21345 + Ile GAT [ENA] ¡û
>W1730023191 LWSA01000143 Acidithiobacillia Acidithiobacillus thiooxidans [LWSA] 6667 6593 - Ile GAT [ENA] ¡û
>W1730023205 LWSB01000182 Acidithiobacillia Acidithiobacillus thiooxidans [LWSB] 6699 6625 - Ile GAT [ENA] ¡û
>W1730023211 LWSC01000048 Acidithiobacillia Acidithiobacillus thiooxidans [LWSC] 12836 12762 - Ile GAT [ENA] ¡û
>W1730023215 LWSD01000032 Acidithiobacillia Acidithiobacillus thiooxidans [LWSD] 17086 17160 + Ile GAT [ENA] ¡û
>W1730025111 LZYI01000116 Acidithiobacillia Acidithiobacillus thiooxidans [LZYI] 6685 6611 - Ile GAT [ENA] ¡û
Identical group No.457039 (2 seq.)
>W10127945 AEFB01000012 Acidithiobacillia Acidithiobacillus sp. GGI-221 [AEFB] 1727 1653 - Ile GAT [ENA] ¡û
>W11135490 AEFB01000012 Acidithiobacillia Acidithiobacillus sp. GGI-221 [AEFB] 1727 1653 - Ile GAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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