tRNA genes clustered and arranged according to each identical group

Acidithiobacillia

Anticodon = GGC

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.285308 (126 seq.)
>W1710777644 LJBT01000013 Acidithiobacillia Acidithiobacillus ferrooxidans [LJBT] 80150 80075 - Ala GGC [ENA] ¡û
>W1710862580 LMEM01000010 Alphaproteobacteria Devosia sp. Root436 [LMEM] 31049 30974 - Ala GGC [ENA] ¡û
>W1711010477 LQRJ01000048 Acidithiobacillia Acidithiobacillus ferrooxidans [LQRJ] 48643 48568 - Ala GGC [ENA] ¡û
>W1711116379 LUAY01000269 Alphaproteobacteria Brucella anthropi [LUAY] 45 120 + Ala GGC [ENA] ¡û
>W1711168359 LVXZ01000131 Acidithiobacillia Acidithiobacillus ferrooxidans [LVXZ] 12905 12980 + Ala GGC [ENA] ¡û
>W1711169879 LVZL01000058 Acidithiobacillia Acidithiobacillus ferrivorans [LVZL] 13988 13913 - Ala GGC [ENA] ¡û
>W1711190292 LWRY01000318 Acidithiobacillia Acidithiobacillus thiooxidans [LWRY] 8631 8556 - Ala GGC [ENA] ¡û
>W1711190382 LWRZ01000275 Acidithiobacillia Acidithiobacillus thiooxidans [LWRZ] 3760 3835 + Ala GGC [ENA] ¡û
>W1711190406 LWSA01000095 Acidithiobacillia Acidithiobacillus thiooxidans [LWSA] 43338 43413 + Ala GGC [ENA] ¡û
>W1711190535 LWSB01000149 Acidithiobacillia Acidithiobacillus thiooxidans [LWSB] 24565 24640 + Ala GGC [ENA] ¡û
>W1711190635 LWSC01000264 Acidithiobacillia Acidithiobacillus thiooxidans [LWSC] 8624 8549 - Ala GGC [ENA] ¡û
>W1711190686 LWSD01000114 Acidithiobacillia Acidithiobacillus thiooxidans [LWSD] 12415 12490 + Ala GGC [ENA] ¡û
>W1711220195 LXQG01000058 Acidithiobacillia Acidithiobacillus caldus [LXQG] 11807 11732 - Ala GGC [ENA] ¡û
>W1711292987 LZYE01000364 Acidithiobacillia Acidithiobacillus caldus [LZYE] 23109 23184 + Ala GGC [ENA] ¡û
>W1711293033 LZYF01000397 Acidithiobacillia Acidithiobacillus caldus [LZYF] 19020 19095 + Ala GGC [ENA] ¡û
>W1711293066 LZYG01000243 Acidithiobacillia Acidithiobacillus caldus [LZYG] 3490 3415 - Ala GGC [ENA] ¡û
>W1711293085 LZYH01000328 Acidithiobacillia Acidithiobacillus caldus [LZYH] 3910 3985 + Ala GGC [ENA] ¡û
>W1711293205 LZYI01000150 Acidithiobacillia Acidithiobacillus thiooxidans [LZYI] 8636 8561 - Ala GGC [ENA] ¡û
>W1711312160 MASQ01000077 Acidithiobacillia Acidithiobacillus ferrivorans [MASQ] 35139 35064 - Ala GGC [ENA] ¡û
>W1711505215 MKVH01000002 Unclassified 'Candidatus Kapabacteria' thiocyanatum sp. 59-99 [MKVH] 359210 359137 - Ala GGC [ENA] ¡û
>W1711585808 MOAD01000001 Acidithiobacillia Acidithiobacillus albertensis [MOAD] 948025 948100 + Ala GGC [ENA] ¡û
>WENV180117915 OARM01001892 [OARM] human gut metagenome; ENVO:feces 1082 1007 - Ala GGC [ENA] ¢þ
>WENV180193203 OAZW01000203 [OAZW] human gut metagenome; faeces 41799 41724 - Ala GGC [ENA] ¢þ
>WENV180286647 OBII01006353 [OBII] human gut metagenome; feces 1796 1871 + Ala GGC [ENA] ¢þ
>WENV180354321 OBLQ011609231 [OBLQ] soil metagenome; soil 66 141 + Ala GGC [ENA] ¢þ
>WENV180449173 OBXF01004490 [OBXF] human gut metagenome; faeces 1354 1279 - Ala GGC [ENA] ¢þ
>WENV180603694 OCPS01000353 [OCPS] human gut metagenome; human gut 4689 4614 - Ala GGC [ENA] ¢þ
>WENV180694269 OCZS012138582 [OCZS] soil metagenome; soil 168 93 - Ala GGC [ENA] ¢þ
>WENV180893117 ODMR01002447 [ODMR] human metagenome; G_DNA_Stool 12011 11936 - Ala GGC [ENA] ¢þ
>WENV180946942 ODUE01004341 [ODUE] human metagenome; G_DNA_Stool 1570 1645 + Ala GGC [ENA] ¢þ
>WENV180956034 ODUK01000391 [ODUK] human metagenome; G_DNA_Stool 33973 34048 + Ala GGC [ENA] ¢þ
>WENV181173328 OEIV011391212 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 50 125 + Ala GGC [ENA] ¢þ
>WENV181406623 OGCG01000684 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 8912 8987 + Ala GGC [ENA] ¢þ
>WENV181425267 OGCQ01000261 [OGCQ] human gut metagenome; human gut 62264 62189 - Ala GGC [ENA] ¢þ
>WENV181467236 OGER01001287 [OGER] metagenome; Human gut stool 1292 1217 - Ala GGC [ENA] ¢þ
>WENV181486106 OGFN01000017 [OGFN] metagenome; Human gut stool 71384 71459 + Ala GGC [ENA] ¢þ
>WENV181515946 OGGX01000039 [OGGX] metagenome; Human gut stool 69782 69857 + Ala GGC [ENA] ¢þ
>WENV181528252 OGHL01000052 [OGHL] metagenome; Human gut stool 11840 11915 + Ala GGC [ENA] ¢þ
>WENV181580520 OGKA01000082 [OGKA] metagenome; Human gut stool 47766 47691 - Ala GGC [ENA] ¢þ
>WENV181619661 OGME01000253 [OGME] metagenome; Human gut stool 34531 34456 - Ala GGC [ENA] ¢þ
>WENV181632881 OGMU01000449 [OGMU] metagenome; Human gut stool 16175 16100 - Ala GGC [ENA] ¢þ
>WENV181650365 OGNU01000939 [OGNU] metagenome; Human gut stool 6422 6347 - Ala GGC [ENA] ¢þ
>WENV181653719 OGNY01019162 [OGNY] metagenome; Human gut stool 312 387 + Ala GGC [ENA] ¢þ
>WENV181935341 OGYU01003115 [OGYU] human gut metagenome; faeces 4600 4675 + Ala GGC [ENA] ¢þ
>WENV181948845 OGZF01000028 [OGZF] human gut metagenome; faeces 47763 47688 - Ala GGC [ENA] ¢þ
>WENV181960090 OGZN01014100 [OGZN] human gut metagenome; faeces 736 811 + Ala GGC [ENA] ¢þ
>WENV181999990 OHAX01000380 [OHAX] human gut metagenome; faeces 19531 19606 + Ala GGC [ENA] ¢þ
>WENV182003282 OHBC01000993 [OHBC] human gut metagenome; feces 1601 1676 + Ala GGC [ENA] ¢þ
>WENV182024811 OHCH01000613 [OHCH] human gut metagenome; feces 1401 1476 + Ala GGC [ENA] ¢þ
>WENV182043675 OHDQ01003424 [OHDQ] human gut metagenome; feces 1685 1760 + Ala GGC [ENA] ¢þ
>W141206780 AZMO01000027 Acidithiobacillia Acidithiobacillus thiooxidans A01 [AZMO] 24260 24185 - Ala GGC [ENA] ¡û
>WENV182118044 OHJF01001095 [OHJF] human gut metagenome; feces 1618 1693 + Ala GGC [ENA] ¢þ
>W141213207 AZRT01000037 Alphaproteobacteria Brucella rhizosphaerae SJY1 [AZRT] 178755 178680 - Ala GGC [ENA] ¡û
>WENV182209562 OHQA01000069 [OHQA] human gut metagenome; feces 68555 68480 - Ala GGC [ENA] ¢þ
>WENV182215346 OHQL01013826 [OHQL] human gut metagenome; feces 692 617 - Ala GGC [ENA] ¢þ
>WENV182228490 OHRH01002639 [OHRH] human gut metagenome; feces 1651 1726 + Ala GGC [ENA] ¢þ
>WENV182266476 OHTY01010400 [OHTY] human gut metagenome; feces 456 531 + Ala GGC [ENA] ¢þ
>WENV182342509 OIAH01005287 [OIAH] human gut metagenome; feces 2002 2077 + Ala GGC [ENA] ¢þ
>WENV182347437 OIAX01000365 [OIAX] human gut metagenome; feces 160 235 + Ala GGC [ENA] ¢þ
>WENV182462497 OINY01004243 [OINY] human gut metagenome; human gut 715 790 + Ala GGC [ENA] ¢þ
>WENV182473265 OIPS01001832 [OIPS] human gut metagenome; human gut 311 386 + Ala GGC [ENA] ¢þ
>W141262900 CCCS020000017 Acidithiobacillia Acidithiobacillus ferrivorans [CCCS] 58440 58365 - Ala GGC [ENA] ¡û
>WENV182656901 OJMK01000120 [OJMK] human gut metagenome; feces 47875 47800 - Ala GGC [ENA] ¢þ
>WENV182683794 OJNX01006464 [OJNX] human gut metagenome; human gut 1918 1843 - Ala GGC [ENA] ¢þ
>WENV182891833 OKSH01005281 [OKSH] human gut metagenome; faeces 1642 1717 + Ala GGC [ENA] ¢þ
>WENV182900214 OKST01015444 [OKST] human gut metagenome; feces 1382 1307 - Ala GGC [ENA] ¢þ
>WENV183006811 OLDF01014648 [OLDF] human gut metagenome; human gut 482 407 - Ala GGC [ENA] ¢þ
>WENV183236514 OLQX01004890 [OLQX] human gut metagenome; faeces 1643 1718 + Ala GGC [ENA] ¢þ
>WENV183468706 OMEH01003897 [OMEH] human gut metagenome; feces 2083 2008 - Ala GGC [ENA] ¢þ
>WENV183491679 OMGH01000154 [OMGH] human gut metagenome; human gut 58953 58878 - Ala GGC [ENA] ¢þ
>WENV183523699 ONZS01002612 [ONZS] human gut metagenome; human gut 1568 1643 + Ala GGC [ENA] ¢þ
>WENV183534915 OOAF01000968 [OOAF] human gut metagenome; human gut 4739 4664 - Ala GGC [ENA] ¢þ
>WENV183599679 OODH01003705 [OODH] human gut metagenome; human gut 1611 1686 + Ala GGC [ENA] ¢þ
>WENV183603779 OODL01000212 [OODL] human gut metagenome; human gut 71168 71243 + Ala GGC [ENA] ¢þ
>WENV183732519 PJTX01001419 [PJTX] soil metagenome; Soil enriched (2) on filter paper: beechwood xylan treatment 2076 2151 + Ala GGC [ENA] ¢þ
>WENV183783487 PPYF01231429 [PPYF] human gut metagenome; stool from patient with Crohn's disease 1592 1667 + Ala GGC [ENA] ¢þ
>WENV183786910 PPYF01308832 [PPYF] human gut metagenome; stool from patient with Crohn's disease 1587 1662 + Ala GGC [ENA] ¢þ
>WENV170008343 AOMP01000118 [AOMP] mine drainage metagenome; low temperature acidic, metal-polluted mine stream 1263 1188 - Ala GGC [ENA] ¢þ
>WENV170008453 AOMQ01000075 [AOMQ] mine drainage metagenome; low temperature acidic, metal-polluted mine stream 4667 4742 + Ala GGC [ENA] ¢þ
>WENV170008560 AOMQ01003850 [AOMQ] mine drainage metagenome; low temperature acidic, metal-polluted mine stream 891 966 + Ala GGC [ENA] ¢þ
>WENV170653075 JRYI01002425 [JRYI] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 1 ppm DO 3166 3241 + Ala GGC [ENA] ¢þ
>WENV170709160 LNFM01000141 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 263605 263680 + Ala GGC [ENA] ¢þ
>WENV170711518 LNFM01005612 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 48568 48643 + Ala GGC [ENA] ¢þ
>WENV170711894 LNFM01008144 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 5379 5304 - Ala GGC [ENA] ¢þ
>W141485423 JFZJ01000021 Alphaproteobacteria Rhodomicrobium udaipurense JA643 [JFZJ] 19331 19256 - Ala GGC [ENA] ¡û
>C181108002 CP024899 Alphaproteobacteria Rhodobaca barguzinensis alga05 [CP024899] 3102541 3102466 - Ala GGC - ¡û
>C181130828 CP026328 Acidithiobacillia Acidithiobacillus caldus MTH-04 [CP026328] 2281531 2281456 - Ala GGC - ¡û
>C191005115 AP018795 Acidithiobacillia Acidithiobacillus ferridurans JCM 18981 [AP018795] 2134677 2134752 + Ala GGC - ¡û
>W141695594 JMEB01000189 Acidithiobacillia Acidithiobacillus thiooxidans [JMEB] 37675 37600 - Ala GGC [ENA] ¡û
>W09134896 ACVD01000050 Acidithiobacillia Acidithiobacillus caldus ATCC 51756 [ACVD] 22838 22763 - Ala GGC [ENA] ¡û
>W141814366 JQGC01000014 Alphaproteobacteria Devosia riboflavina [JQGC] 54809 54734 - Ala GGC [ENA] ¡û
>C09100359 CP001219 Acidithiobacillia Acidithiobacillus ferrooxidans ATCC 23270 [CP001219] 909149 909224 + Ala GGC [Ensembl] ¡û
>W1910729760 MGYY01000101 Gammaproteobacteria Gammaproteobacteria bacterium RIFCSPLOWO2_12_FULL_52_10 [MGYY] 6877 6802 - Ala GGC [ENA] ¡û
>W1910831855 MXAV01000044 Acidithiobacillia Acidithiobacillus marinus SH [MXAV] 81511 81586 + Ala GGC [ENA] ¡û
>W1911566025 PCON01000002 Alphaproteobacteria Ochrobactrum sp. MYb18 [PCON] 600043 599968 - Ala GGC [ENA] ¡û
>W1810090777 PGGM01000001 Alphaproteobacteria Phyllobacterium sophorae CCBAU 03422 [PGGM] 463879 463954 + Ala GGC [ENA] ¡û
>W1810679282 QKQP01000001 Acidithiobacillia Acidithiobacillus ferrooxidans CCM 4253 [QKQP] 397058 396983 - Ala GGC [ENA] ¡û
>W1810685916 QKZQ01000008 Alphaproteobacteria Roseinatronobacter thiooxidans DSM 13087 [QKZQ] 47574 47649 + Ala GGC [ENA] ¡û
>C151007964 CP005986 Acidithiobacillia Acidithiobacillus caldus ATCC 51756 [CP005986] 2321821 2321746 - Ala GGC [Ensembl] ¡û
>C11100507 CP002573 Acidithiobacillia Acidithiobacillus caldus SM-1 [CP002573] 2478019 2477944 - Ala GGC [Ensembl] ¡û
>C11100748 CP002985 Acidithiobacillia Acidithiobacillus ferrivorans SS3 [CP002985] 1758561 1758486 - Ala GGC [Ensembl] ¡û
>W1510591539 CTZD01000195 Bacillota Staphylococcus aureus DEU35 [CTZD] 1641 1716 + Ala GGC [ENA] ¡û
>W1510591597 CTZE01000191 Bacillota Staphylococcus aureus DEU41 [CTZE] 6094 6019 - Ala GGC [ENA] ¡û
>W1510597825 CUDK01013762 Bacillota Staphylococcus aureus DEU39 [CUDK] 34 109 + Ala GGC [ENA] ¡û
>C11106921 CP002736 Bacillota Desulfotomaculum nigrificans CO-1-SRB [CP002736] 876225 876300 + Ala GGC [Ensembl] ¡û
>C11106922 CP002736 Bacillota Desulfotomaculum nigrificans CO-1-SRB [CP002736] 1084184 1084259 + Ala GGC [Ensembl] ¡û
>C11119005 CP002292 Alphaproteobacteria Rhodomicrobium vannielii ATCC 17100 [CP002292] 1022042 1022117 + Ala GGC [Ensembl] ¡û
>W11164286 AFJD01000012 Acidithiobacillia Acidithiobacillus ferrivorans SS3 [AFJD] 77865 77940 + Ala GGC [ENA] ¡û
>W11168515 AFOH01000002 Acidithiobacillia Acidithiobacillus thiooxidans ATCC 19377 [AFOH] 13127 13052 - Ala GGC [ENA] ¡û
>W1610419695 FIZO01000001 Campylobacterota Campylobacter geochelonis subsp. fetus [FIZO] 217222 217297 + Ala GGC [ENA] ¡û
>W1610419747 FIZP01000001 Campylobacterota Campylobacter geochelonis subsp. fetus [FIZP] 410169 410094 - Ala GGC [ENA] ¡û
>W1610419797 FIZQ01000005 Campylobacterota Campylobacter geochelonis subsp. fetus [FIZQ] 158063 157988 - Ala GGC [ENA] ¡û
>W1610627898 LIEB01000017 Nitrospirota Leptospirillum sp. YQP-1 [LIEB] 80124 80049 - Ala GGC [ENA] ¡û
>W1610641830 LJBT01000013 Acidithiobacillia Acidithiobacillus ferrooxidans [LJBT] 80150 80075 - Ala GGC [ENA] ¡û
>W1610724926 LMEM01000010 Alphaproteobacteria Devosia sp. Root436 [LMEM] 31049 30974 - Ala GGC [ENA] ¡û
>W1610858997 LQRJ01000048 Acidithiobacillia Acidithiobacillus ferrooxidans [LQRJ] 48643 48568 - Ala GGC [ENA] ¡û
>W1610927621 LUAY01000269 Alphaproteobacteria Brucella anthropi [LUAY] 45 120 + Ala GGC [ENA] ¡û
>W1610978274 LVXZ01000131 Acidithiobacillia Acidithiobacillus ferrooxidans [LVXZ] 12905 12980 + Ala GGC [ENA] ¡û
>W1611004667 LXQG01000058 Acidithiobacillia Acidithiobacillus caldus [LXQG] 11807 11732 - Ala GGC [ENA] ¡û
>W1611057361 MASQ01000077 Acidithiobacillia Acidithiobacillus ferrivorans [MASQ] 35139 35064 - Ala GGC [ENA] ¡û
>W1710419431 FIZO01000001 Campylobacterota Campylobacter geochelonis subsp. fetus [FIZO] 217222 217297 + Ala GGC [ENA] ¡û
>W1710419483 FIZP01000001 Campylobacterota Campylobacter geochelonis subsp. fetus [FIZP] 410169 410094 - Ala GGC [ENA] ¡û
>W1710419533 FIZQ01000005 Campylobacterota Campylobacter geochelonis subsp. fetus [FIZQ] 158063 157988 - Ala GGC [ENA] ¡û
>W1710586469 FQXF01000014 Bacillota Desulforamulus hydrothermalis Lam5 = DSM 18033 [FQXF] 34870 34945 + Ala GGC [ENA] ¡û
>W1710743703 LGYM01000034 Acidithiobacillia Acidithiobacillus thiooxidans [LGYM] 41466 41391 - Ala GGC [ENA] ¡û
>W1710759025 LIEB01000017 Nitrospirota Leptospirillum sp. YQP-1 [LIEB] 80124 80049 - Ala GGC [ENA] ¡û
Identical group No.310831 (88 seq.)
>W1710798721 LJTW01000002 Gammaproteobacteria Thiotrichales bacterium SG8_50 [LJTW] 40671 40596 - Ala GGC [ENA] ¡û
>W1710799174 LJUK01000022 Acidithiobacillia Acidithiobacillales bacterium SM23_46 [LJUK] 12123 12048 - Ala GGC [ENA] ¡û
>W1711403112 MFST01000079 Unclassified Candidatus Muproteobacteria bacterium RBG_16_65_31 [MFST] 822 897 + Ala GGC [ENA] ¡û
>WENV013225 AACY020363380 Marine microbial communities from Global Ocean Sampling (GOS) 753 828 + Ala GGC [ENA]
>WENV015645 AACY020440216 Marine microbial communities from Global Ocean Sampling (GOS) 5565 5490 - Ala GGC [ENA]
>WENV180048414 MPLT02347947 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 4226 4151 - Ala GGC [ENA] ¢þ
>WENV180261679 OBEQ011316659 [OBEQ] groundwater metagenome; groundwater 25036 24961 - Ala GGC [ENA] ¢þ
>WENV180320900 OBKQ01050983 [OBKQ] soil metagenome; Clay 403 328 - Ala GGC [ENA] ¢þ
>WENV181192931 OEPS011227038 [OEPS] soil metagenome; soil 105 32 - Ala GGC [ENA] ¢þ
>WENV181298018 OFHL01015408 [OFHL] soil metagenome; Clay 6 79 + Ala GGC [ENA] ¢þ
>WENV183680109 ORMF010139860 [ORMF] groundwater metagenome; groundwater 109 182 + Ala GGC [ENA] ¢þ
>WENV183800557 PVBE010596518 [PVBE] marine metagenome; water 25583 25658 + Ala GGC [ENA] ¢þ
>WENV183808971 PVBE011344103 [PVBE] marine metagenome; water 723 648 - Ala GGC [ENA] ¢þ
>WENV170114334 CENF01176019 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 317 242 - Ala GGC [ENA] ¢þ
>WENV170147905 CENZ01196406 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 538 613 + Ala GGC [ENA] ¢þ
>WENV170176359 CEOS01068392 [CEOS] marine metagenome genome assembly TARA_056_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 935 1010 + Ala GGC [ENA] ¢þ
>WENV170187089 CEPA01118911 [CEPA] marine metagenome genome assembly TARA_052_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4669 4594 - Ala GGC [ENA] ¢þ
>WENV170189561 CEPC01007152 [CEPC] marine metagenome genome assembly TARA_064_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 603 678 + Ala GGC [ENA] ¢þ
>WENV170195350 CEPJ01127713 [CEPJ] marine metagenome genome assembly TARA_048_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 387 312 - Ala GGC [ENA] ¢þ
>WENV170195351 CEPJ01127714 [CEPJ] marine metagenome genome assembly TARA_048_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 387 312 - Ala GGC [ENA] ¢þ
>WENV170199228 CEPL01087933 [CEPL] marine metagenome genome assembly TARA_045_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 606 531 - Ala GGC [ENA] ¢þ
>WENV170207938 CEPU01137403 [CEPU] marine metagenome genome assembly TARA_041_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 403 328 - Ala GGC [ENA] ¢þ
>WENV170222768 CEQD01062973 [CEQD] marine metagenome genome assembly TARA_042_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 618 693 + Ala GGC [ENA] ¢þ
>WENV020729 AACY020557673 Marine microbial communities from Global Ocean Sampling (GOS) 5798 5873 + Ala GGC [ENA]
>WENV170245060 CEQP01066425 [CEQP] marine metagenome genome assembly TARA_076_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 355 430 + Ala GGC [ENA] ¢þ
>WENV170273533 CERL01099817 [CERL] marine metagenome genome assembly TARA_068_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 317 242 - Ala GGC [ENA] ¢þ
>WENV170300409 CESG01122751 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 878 953 + Ala GGC [ENA] ¢þ
>WENV170317947 CESQ01002303 [CESQ] marine metagenome genome assembly TARA_100_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1149 1074 - Ala GGC [ENA] ¢þ
>WENV170337027 CETA01059881 [CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1954 2029 + Ala GGC [ENA] ¢þ
>WENV170339582 CETB01141410 [CETB] marine metagenome genome assembly TARA_112_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 274 349 + Ala GGC [ENA] ¢þ
>WENV170348981 CETH01002337 [CETH] marine metagenome genome assembly TARA_122_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3189 3114 - Ala GGC [ENA] ¢þ
>WENV170362925 CETM01111236 [CETM] marine metagenome genome assembly TARA_122_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2166 2091 - Ala GGC [ENA] ¢þ
>WENV170364198 CETM01204075 [CETM] marine metagenome genome assembly TARA_122_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2016 2091 + Ala GGC [ENA] ¢þ
>WENV170377393 CETU01155775 [CETU] marine metagenome genome assembly TARA_142_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 370 445 + Ala GGC [ENA] ¢þ
>WENV170378301 CETV01010760 [CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 206 281 + Ala GGC [ENA] ¢þ
>WENV170378549 CETV01027807 [CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1815 1740 - Ala GGC [ENA] ¢þ
>WENV170381552 CETW01176890 [CETW] marine metagenome genome assembly TARA_052_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 362 437 + Ala GGC [ENA] ¢þ
>WENV170388618 CETZ01105302 [CETZ] marine metagenome genome assembly TARA_132_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 836 911 + Ala GGC [ENA] ¢þ
>WENV170391409 CEUA01228945 [CEUA] marine metagenome genome assembly TARA_132_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 28197 28272 + Ala GGC [ENA] ¢þ
>WENV170393287 CEUB01156503 [CEUB] marine metagenome genome assembly TARA_138_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 223 298 + Ala GGC [ENA] ¢þ
>WENV170415721 CEUL01062735 [CEUL] marine metagenome genome assembly TARA_124_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 451 526 + Ala GGC [ENA] ¢þ
>WENV170416759 CEUL01144797 [CEUL] marine metagenome genome assembly TARA_124_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 630 705 + Ala GGC [ENA] ¢þ
>WENV170418647 CEUM01058335 [CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 189 114 - Ala GGC [ENA] ¢þ
>WENV170422528 CEUN01166942 [CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 449 524 + Ala GGC [ENA] ¢þ
>WENV170454375 CEVA01035651 [CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 285 360 + Ala GGC [ENA] ¢þ
>WENV170475709 CEVI01026769 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 229 154 - Ala GGC [ENA] ¢þ
>WENV170482287 CEVM01019216 [CEVM] marine metagenome genome assembly TARA_145_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2844 2769 - Ala GGC [ENA] ¢þ
>WENV170487408 CEVO01053584 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 454 529 + Ala GGC [ENA] ¢þ
>WENV170487511 CEVO01064502 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 202 127 - Ala GGC [ENA] ¢þ
>WENV170498963 CEVT01095152 [CEVT] marine metagenome genome assembly TARA_150_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 230 155 - Ala GGC [ENA] ¢þ
>WENV170505863 CEVW01110877 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 399 474 + Ala GGC [ENA] ¢þ
>WENV170517292 CEWE01024786 [CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 10282 10357 + Ala GGC [ENA] ¢þ
>WENV170528758 CEWJ01070962 [CEWJ] marine metagenome genome assembly TARA_128_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 229 154 - Ala GGC [ENA] ¢þ
>WENV170532449 CEWO01041903 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 110 185 + Ala GGC [ENA] ¢þ
>WENV170586793 FUFK010444819 [FUFK] metagenome; unknown 875 950 + Ala GGC [ENA] ¢þ
>WENV170652045 JRYG01057679 [JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated 2225 2150 - Ala GGC [ENA] ¢þ
>WENV170741054 LULS01005540 [LULS] marine metagenome; Red Sea water column Station 108 - depth 200m 138 63 - Ala GGC [ENA] ¢þ
>WENV170746402 LULZ01034699 [LULZ] marine metagenome; Red Sea water column Station 91 - depth 100m 56 131 + Ala GGC [ENA] ¢þ
>WENV170750012 LUMG01000001 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 128551 128626 + Ala GGC [ENA] ¢þ
>WENV170756487 LUMP01000019 [LUMP] marine metagenome; Red Sea water column Station 12 - depth 47m 5131 5206 + Ala GGC [ENA] ¢þ
>WENV170831210 MDSZ01040313 [MDSZ] marine metagenome; seawater 1866 1791 - Ala GGC [ENA] ¢þ
>WENV170838542 MDSZ01169835 [MDSZ] marine metagenome; seawater 2321 2396 + Ala GGC [ENA] ¢þ
>WENV170849833 MDTA01103003 [MDTA] marine metagenome; seawater 2327 2402 + Ala GGC [ENA] ¢þ
>WENV170902565 MDTD01187328 [MDTD] marine metagenome; seawater 559 634 + Ala GGC [ENA] ¢þ
>WENV170903415 MDTD01201618 [MDTD] marine metagenome; seawater 3611 3686 + Ala GGC [ENA] ¢þ
>C181000804 AP014879 Gammaproteobacteria Sulfuricaulis limicola HA5 [AP014879] 1802148 1802073 - Ala GGC - ¡û
>C191004445 AP018724 Gammaproteobacteria Sulfurivermis fontis JG42 [AP018724] 1675235 1675160 - Ala GGC - ¡û
>W1910640207 LSRW01000078 Gammaproteobacteria Steroidobacter cummioxidans 35Y [LSRW] 58598 58673 + Ala GGC [ENA] ¡û
>W1910714541 MFSW01000147 Unclassified Candidatus Muproteobacteria bacterium RIFCSPHIGHO2_01_60_12 [MFSW] 6363 6438 + Ala GGC [ENA] ¡û
>W1910714577 MFSY01000039 Unclassified Candidatus Muproteobacteria bacterium RIFCSPHIGHO2_01_FULL_65_16 [MFSY] 7831 7906 + Ala GGC [ENA] ¡û
>W1910714596 MFSZ01000050 Unclassified Candidatus Muproteobacteria bacterium RIFCSPHIGHO2_02_FULL_60_13 [MFSZ] 303 228 - Ala GGC [ENA] ¡û
>W1910714629 MFTA01000057 Unclassified Candidatus Muproteobacteria bacterium RIFCSPHIGHO2_02_FULL_65_16 [MFTA] 2843 2768 - Ala GGC [ENA] ¡û
>W1910727653 MGUP01000756 Elusimicrobiota Elusimicrobia bacterium RIFCSPHIGHO2_02_FULL_61_10 [MGUP] 87 162 + Ala GGC [ENA] ¡û
>W1910729210 MGYG01000089 Gammaproteobacteria Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_43_28 [MGYG] 12367 12441 + Ala GGC [ENA] ¡û
>W1910729219 MGYH01000006 Gammaproteobacteria Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_45_12 [MGYH] 38663 38735 + Ala GGC [ENA] ¡û
>W1810516486 QCAT01000003 Alphaproteobacteria OCS116 cluster bacterium AG-343-E15 [QCAT] 4087 4012 - Ala GGC [ENA] ¡û
>W1810525730 QCOD01000002 Alphaproteobacteria OCS116 cluster bacterium AG-430-B22 [QCOD] 86598 86673 + Ala GGC [ENA] ¡û
>W1810526132 QCOV01000002 Alphaproteobacteria OCS116 cluster bacterium AG-435-F03 [QCOV] 122881 122956 + Ala GGC [ENA] ¡û
>W1810763192 QQAX01000007 Gammaproteobacteria Aquicella lusitana DSM 16500 [QQAX] 33021 32949 - Ala GGC [ENA] ¡û
>ENV09003071 ADGO01003453 Compost metagenome contig00001 1573 1498 - Ala GGC [ENA] ¡û
>ENV09003135 ADGO01006296 Compost metagenome contig00001 199 274 + Ala GGC [ENA] ¡û
>WENV053409 AACY023095273 Marine microbial communities from Global Ocean Sampling (GOS) 528 603 + Ala GGC [ENA]
>WENV053726 AACY023115344 Marine microbial communities from Global Ocean Sampling (GOS) 188 113 - Ala GGC [ENA]
>WENV059771 AACY023374770 Marine microbial communities from Global Ocean Sampling (GOS) 911 986 + Ala GGC [ENA]
>WENV066633 AACY023656056 Marine microbial communities from Global Ocean Sampling (GOS) 324 399 + Ala GGC [ENA]
>W1610662678 LJTW01000002 Gammaproteobacteria Thiotrichales bacterium SG8_50 [LJTW] 40671 40596 - Ala GGC [ENA] ¡û
>W1610663131 LJUK01000022 Acidithiobacillia Acidithiobacillales bacterium SM23_46 [LJUK] 12123 12048 - Ala GGC [ENA] ¡û
>WENV081459 ABEF01048236 Marine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA) 494 569 + Ala GGC [ENA]
Identical group No.316460 (17 seq.)
>W131231765 AUIS01000004 Acidithiobacillia Thermithiobacillus tepidarius DSM 3134 [AUIS] 73578 73653 + Ala GGC [ENA] ¡û
>C012890 CP000471 Alphaproteobacteria Magnetococcus marinus MC-1 [CP000471] 1409916 1409991 + Ala GGC [Ensembl] ¡û
>WENV180591537 OCOV01041352 [OCOV] marine metagenome; ENVO:01000301 504 429 - Ala GGC [ENA] ¢þ
>W141266439 CCMO01000178 Unclassified bacterium YEK0313 [CCMO] 11556 11481 - Ala GGC [ENA] ¡û
>C08000406 CP001132 Acidithiobacillia Acidithiobacillus ferrooxidans ATCC 53993 [CP001132] 1083338 1083413 + Ala GGC [Ensembl] ¡û
>C191170854 CP039690 Alphaproteobacteria Phreatobacter stygius KCTC 52518 [CP039690] 3154228 3154303 + Ala GGC - ¡û
>W141738839 JNNH01000653 Acidithiobacillia Acidithiobacillus ferrooxidans ferriphilum [JNNH] 280 205 - Ala GGC [ENA] ¡û
>W09100108 AAAN03000001 Alphaproteobacteria Magnetococcus marinus MC-1 [AAAN] 456478 456403 - Ala GGC [ENA] ¡û
>W1911581876 PGOI01000013 Alphaproteobacteria Pseudorhodobacter sp. MZDSW-24AT [PGOI] 42729 42804 + Ala GGC [ENA] ¡û
>W1810119948 PHSI01000037 Alphaproteobacteria Cereibacter azotoformans YLK20 [PHSI] 36372 36447 + Ala GGC [ENA] ¡û
>W1810257137 PQJK01000004 Acidithiobacillia Acidithiobacillus ferridurans IO-2C [PQJK] 51026 50951 - Ala GGC [ENA] ¡û
>W1810368595 PVZS01000011 Alphaproteobacteria Alsobacter soli SH9 [PVZS] 134179 134254 + Ala GGC [ENA] ¡û
>W10112697 ADFF01000005 Alphaproteobacteria Rhodomicrobium vannielii ATCC 17100 [ADFF] 41635 41560 - Ala GGC [ENA] ¡û
>W10127975 AEFB01000353 Acidithiobacillia Acidithiobacillus sp. GGI-221 [AEFB] 94 169 + Ala GGC [ENA] ¡û
>W11115924 ADFF01000005 Alphaproteobacteria Rhodomicrobium vannielii ATCC 17100 [ADFF] 41635 41560 - Ala GGC [ENA] ¡û
>W11135520 AEFB01000353 Acidithiobacillia Acidithiobacillus sp. GGI-221 [AEFB] 94 169 + Ala GGC [ENA] ¡û
>W1710599476 FTOT01000001 Alphaproteobacteria Gemmobacter megaterium [FTOT] 36089 36164 + Ala GGC [ENA] ¡û
Identical group No.319215 (7 seq.)
>W1711190345 LWRZ01000058 Acidithiobacillia Acidithiobacillus thiooxidans [LWRZ] 7815 7890 + Ala GGC [ENA] ¡û
>W1711190465 LWSA01000290 Acidithiobacillia Acidithiobacillus thiooxidans [LWSA] 5359 5284 - Ala GGC [ENA] ¡û
>W1711190528 LWSB01000089 Acidithiobacillia Acidithiobacillus thiooxidans [LWSB] 11288 11363 + Ala GGC [ENA] ¡û
>W1711190676 LWSD01000073 Acidithiobacillia Acidithiobacillus thiooxidans [LWSD] 17067 16992 - Ala GGC [ENA] ¡û
>W1711293147 LZYI01000014 Acidithiobacillia Acidithiobacillus thiooxidans [LZYI] 5377 5302 - Ala GGC [ENA] ¡û
>W141206753 AZMO01000001 Acidithiobacillia Acidithiobacillus thiooxidans A01 [AZMO] 140577 140652 + Ala GGC [ENA] ¡û
>W141695582 JMEB01000106 Acidithiobacillia Acidithiobacillus thiooxidans [JMEB] 12469 12394 - Ala GGC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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